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Contents:In the table below, Illumina Nextera Handle sequences have been added and highlighted in bold. Primers for the on-target have been added for convenience. The table below is sorted by the CFD off-target score. Sites with very low CFD scores < 0.02 are unlikely to be cleaved, see our study Haeussler et al. 2016, Figure 2.
In the protocol by Matthew Canver, Harvard, two PCRs are run: one PCR to amplify the potential off-target, then a second PCR to extend the handles with Illumina barcodes. Please click here to download the protocol. Alternatively, you can have a look at Fu et al, 2014.
If a primer was not found, the reason is usually that the region around the off-target is too repetitive. To avoid unspecific primers, all repeats are masked for the primer design (not for off-target search). If you think that we should change the parameters here or should use different primer3 settings, please let us know.
| Name | Primer Sequence | Tm | CFD Score |
|---|---|---|---|
| ontarget_mm0_exon_5730457N03Rik/Evx1_chr6_52314138_F | TCGTCGGCAGCGTCGTCGATGGACTAGCAGGCAG | 60.2 | 1.00 |
| ontarget_mm0_exon_5730457N03Rik/Evx1_chr6_52314138_R | GTCTCGTGGGCTCGGAGCTACTAGGTTGCCCTTGG | 59.0 | 1.00 |
| mm4_intergenic_Asic2|4930527B05Rik_chr11_81316396_F | TCGTCGGCAGCGTCGGACCAATGGCACTGTCTCA | 59.9 | 0.33 |
| mm4_intergenic_Asic2|4930527B05Rik_chr11_81316396_R | GTCTCGTGGGCTCGGACACTGAACATGAAGGGCTGT | 59.8 | 0.33 |
| mm4_intron_Kctd10_chr5_114376800_F | TCGTCGGCAGCGTCGCAGTCATGACCAAACACATCC | 60.0 | 0.30 |
| mm4_intron_Kctd10_chr5_114376800_R | GTCTCGTGGGCTCGGCCACCACACACAAACACACC | 59.8 | 0.30 |
| mm4_intergenic_Pitpnb|Mn1_chr5_111398283_F | TCGTCGGCAGCGTCTTGTGTGGAGCTCCGTGTAC | 59.9 | 0.23 |
| mm4_intergenic_Pitpnb|Mn1_chr5_111398283_R | GTCTCGTGGGCTCGGCAACATCTCCCTCTCGTGCA | 59.7 | 0.23 |
| mm4_exon_Nacc2/Gm13554_chr2_26060073_F | TCGTCGGCAGCGTCCTTCTTGTTGCTGTGGCCAC | 59.9 | 0.23 |
| mm4_exon_Nacc2/Gm13554_chr2_26060073_R | GTCTCGTGGGCTCGGGGGTGGCTCTGTTATCCAGG | 59.8 | 0.23 |
| mm4_intergenic_Mcm5|Rasd2_chr8_75162825_F | Primer3: not found at this Tm | N.d. | 0.22 |
| mm4_intergenic_Mcm5|Rasd2_chr8_75162825_R | Primer3: not found at this Tm | N.d. | 0.22 |
| mm4_intron_Themis2_chr4_132792839_F | TCGTCGGCAGCGTCCCCCTAGTGTAGCCCTCAGG | 60.7 | 0.20 |
| mm4_intron_Themis2_chr4_132792839_R | GTCTCGTGGGCTCGGAGAGCCAGGAGAAAGTGCAC | 59.9 | 0.20 |
| mm4_intergenic_Tango6|Has3_chr8_106858924_F | Primer3: not found at this Tm | N.d. | 0.19 |
| mm4_intergenic_Tango6|Has3_chr8_106858924_R | Primer3: not found at this Tm | N.d. | 0.19 |
| mm4_intron_Prkce_chr17_86418257_F | TCGTCGGCAGCGTCCAAGGGTTGGGCCTCTATGG | 60.1 | 0.18 |
| mm4_intron_Prkce_chr17_86418257_R | GTCTCGTGGGCTCGGTCTTACCCAGCTTGCACCTG | 59.9 | 0.18 |
| mm4_intron_Lmx1a_chr1_167789815_F | TCGTCGGCAGCGTCGGCCATACAGCACACTCCTT | 60.0 | 0.18 |
| mm4_intron_Lmx1a_chr1_167789815_R | GTCTCGTGGGCTCGGAGCTTTGAGTGGAGGAAGCC | 59.9 | 0.18 |
| mm3_intergenic_Smlr1|Tmem200a_chr10_25696510_F | Primer3: not found at this Tm | N.d. | 0.17 |
| mm3_intergenic_Smlr1|Tmem200a_chr10_25696510_R | Primer3: not found at this Tm | N.d. | 0.17 |
| mm4_intron_Fryl_chr5_73052957_F | TCGTCGGCAGCGTCCAGTGGATGAGCTCTGACGG | 60.1 | 0.16 |
| mm4_intron_Fryl_chr5_73052957_R | GTCTCGTGGGCTCGGTCTGTGATCTCATGCACCCC | 59.4 | 0.16 |
| mm4_intergenic_Gm833|Gm25779_chr4_152790533_F | TCGTCGGCAGCGTCCAGGAGAGGAACACCTGCTC | 59.7 | 0.14 |
| mm4_intergenic_Gm833|Gm25779_chr4_152790533_R | GTCTCGTGGGCTCGGTCTTCCCGCGTAGACTGAGA | 60.0 | 0.14 |
| mm4_intron_Nfyb_chr10_82758839_F | TCGTCGGCAGCGTCGCGTTCACTTGTCTGAAGCC | 59.7 | 0.10 |
| mm4_intron_Nfyb_chr10_82758839_R | GTCTCGTGGGCTCGGCCCATGGAGCAGTCACTAGC | 60.1 | 0.10 |
| mm4_intron_Rad50_chr11_53704584_F | Primer3: not found at this Tm | N.d. | 0.10 |
| mm4_intron_Rad50_chr11_53704584_R | Primer3: not found at this Tm | N.d. | 0.10 |
| mm4_exon_Scn3b_chr9_40269328_F | TCGTCGGCAGCGTCTTGATCACCCAATCGCCCAG | 60.3 | 0.10 |
| mm4_exon_Scn3b_chr9_40269328_R | GTCTCGTGGGCTCGGGACTGGCGATCTCAGAGGTG | 59.8 | 0.10 |
| mm4_intergenic_Osbpl3|Gm26289_chr6_50457480_F | TCGTCGGCAGCGTCTCTCTGAGGCTCTTTCTCACA | 58.1 | 0.09 |
| mm4_intergenic_Osbpl3|Gm26289_chr6_50457480_R | GTCTCGTGGGCTCGGTCTTCGTCAAACTTCCCCGG | 59.9 | 0.09 |
| mm4_intergenic_1700041M05Rik|Grik3_chr4_125396722_F | TCGTCGGCAGCGTCTGGCATATCACCCCAAAGCA | 59.6 | 0.08 |
| mm4_intergenic_1700041M05Rik|Grik3_chr4_125396722_R | GTCTCGTGGGCTCGGGAGCTGTCCAGAAGGCACAT | 60.0 | 0.08 |
| mm4_intergenic_Klf11|Cys1_chr12_24665396_F | TCGTCGGCAGCGTCATACCTGGTACCTGGGCAGT | 59.9 | 0.07 |
| mm4_intergenic_Klf11|Cys1_chr12_24665396_R | GTCTCGTGGGCTCGGGCCGACTGATGAGCTGTGAT | 60.1 | 0.07 |
| mm4_intergenic_Pars2|Ttc4_chr4_106658461_F | Primer3: not found at this Tm | N.d. | 0.07 |
| mm4_intergenic_Pars2|Ttc4_chr4_106658461_R | Primer3: not found at this Tm | N.d. | 0.07 |
| mm4_exon_Micall1_chr15_79120773_F | TCGTCGGCAGCGTCCGGTAACTGTACCCCGTTCC | 60.1 | 0.07 |
| mm4_exon_Micall1_chr15_79120773_R | GTCTCGTGGGCTCGGCCAAGTACCGCTGCACCA | 59.9 | 0.07 |
| mm4_intron_Ttc3_chr16_94400311_F | Primer3: not found at this Tm | N.d. | 0.07 |
| mm4_intron_Ttc3_chr16_94400311_R | Primer3: not found at this Tm | N.d. | 0.07 |
| mm4_intron_Ccdc85c_chr12_108208831_F | TCGTCGGCAGCGTCGGTTGTCCTCAGTTAGGCCC | 60.0 | 0.06 |
| mm4_intron_Ccdc85c_chr12_108208831_R | GTCTCGTGGGCTCGGAGATCGCTCCATGCCTATGC | 60.0 | 0.06 |
| mm4_intergenic_Gm13090|Camta1_chr4_151102334_F | Primer3: not found at this Tm | N.d. | 0.06 |
| mm4_intergenic_Gm13090|Camta1_chr4_151102334_R | Primer3: not found at this Tm | N.d. | 0.06 |
| mm4_intron_Mxi1_chr19_53348159_F | TCGTCGGCAGCGTCAATCTGGTGTCCCTCTGTGC | 59.6 | 0.05 |
| mm4_intron_Mxi1_chr19_53348159_R | GTCTCGTGGGCTCGGGAAGAGAGCTGTGAGGCCTG | 60.1 | 0.05 |
| mm4_intergenic_Rnf130|Mir340_chr11_50058302_F | TCGTCGGCAGCGTCAGTGGCTTTAAGTCTGGGCT | 58.9 | 0.05 |
| mm4_intergenic_Rnf130|Mir340_chr11_50058302_R | GTCTCGTGGGCTCGGGCCTGTAATTACCTCGCCCA | 59.8 | 0.05 |
| mm4_intron_Rad50_chr11_53662977_F | Primer3: not found at this Tm | N.d. | 0.05 |
| mm4_intron_Rad50_chr11_53662977_R | Primer3: not found at this Tm | N.d. | 0.05 |
| mm4_intron_Lmtk3_chr7_45785255_F | Primer3: not found at this Tm | N.d. | 0.05 |
| mm4_intron_Lmtk3_chr7_45785255_R | Primer3: not found at this Tm | N.d. | 0.05 |
| mm4_intergenic_Mrpl36|Lpcat1_chr13_73416792_F | TCGTCGGCAGCGTCAAAGAGGTGGATGTCCGCTG | 60.0 | 0.04 |
| mm4_intergenic_Mrpl36|Lpcat1_chr13_73416792_R | GTCTCGTGGGCTCGGCACCTCACCTGCCATTAGCT | 59.7 | 0.04 |
| mm4_exon_Stk11ip_chr1_75529128_F | TCGTCGGCAGCGTCTCCAGCCATAGAGGACGACA | 60.0 | 0.04 |
| mm4_exon_Stk11ip_chr1_75529128_R | GTCTCGTGGGCTCGGGGCTCTGGCTCCACCCTG | 62.1 | 0.04 |
| mm4_intergenic_Wdr20a|Stk30_chr12_110797404_F | TCGTCGGCAGCGTCCACTGGACAGTTGGACCCTC | 59.9 | 0.03 |
| mm4_intergenic_Wdr20a|Stk30_chr12_110797404_R | GTCTCGTGGGCTCGGCTACAGGGCAGCTGCTTTCT | 60.0 | 0.03 |
| mm4_intron_Rps6kc1_chr1_190723236_F | TCGTCGGCAGCGTCGGGAGGGAAGAGCCATGAAA | 59.3 | 0.03 |
| mm4_intron_Rps6kc1_chr1_190723236_R | GTCTCGTGGGCTCGGGGGTGGATGAGCTCATGACC | 60.1 | 0.03 |
| mm4_intron_Ppp1r16a_chr15_76671926_F | TCGTCGGCAGCGTCGTGAGGGGCCTGCAGAAG | 60.0 | 0.03 |
| mm4_intron_Ppp1r16a_chr15_76671926_R | GTCTCGTGGGCTCGGATGGATTTGCCCGACCAACA | 60.2 | 0.03 |
| mm4_intron_Fkbp6_chr5_135348157_F | Primer3: not found at this Tm | N.d. | 0.02 |
| mm4_intron_Fkbp6_chr5_135348157_R | Primer3: not found at this Tm | N.d. | 0.02 |
| mm4_intron_Pacsin2_chr15_83443647_F | Primer3: not found at this Tm | N.d. | 0.02 |
| mm4_intron_Pacsin2_chr15_83443647_R | Primer3: not found at this Tm | N.d. | 0.02 |
| mm4_intergenic_Kap|Etv6_chr6_133902220_F | Primer3: not found at this Tm | N.d. | 0.02 |
| mm4_intergenic_Kap|Etv6_chr6_133902220_R | Primer3: not found at this Tm | N.d. | 0.02 |
| mm4_intergenic_Gm10709|Tmem123_chr9_7752666_F | Primer3: not found at this Tm | N.d. | 0.02 |
| mm4_intergenic_Gm10709|Tmem123_chr9_7752666_R | Primer3: not found at this Tm | N.d. | 0.02 |
| mm4_intergenic_Coq3|Faxc_chr4_21923663_F | Primer3: not found at this Tm | N.d. | 0.02 |
| mm4_intergenic_Coq3|Faxc_chr4_21923663_R | Primer3: not found at this Tm | N.d. | 0.02 |
| mm4_intron_Prrc1_chr18_57356240_F | Primer3: not found at this Tm | N.d. | 0.02 |
| mm4_intron_Prrc1_chr18_57356240_R | Primer3: not found at this Tm | N.d. | 0.02 |
| mm3_intergenic_Spata2|Rnf114/Spata2_chr2_167492119_F | TCGTCGGCAGCGTCGGGCCTTCCAAAGCTCTGAA | 60.2 | 0.02 |
| mm3_intergenic_Spata2|Rnf114/Spata2_chr2_167492119_R | GTCTCGTGGGCTCGGTAGAGAGGGGACTTGGCTCC | 60.0 | 0.02 |
| mm4_intergenic_Mtx3|Cmya5_chr13_92987491_F | TCGTCGGCAGCGTCTGTGTGGCTCTTTCCTGTCC | 59.8 | 0.02 |
| mm4_intergenic_Mtx3|Cmya5_chr13_92987491_R | GTCTCGTGGGCTCGGTAAGCATCACGGAGGGGATG | 59.2 | 0.02 |
| mm4_intron_Phf17_chr3_41584370_F | TCGTCGGCAGCGTCCAGAAGGTGGAGTGAGTTGGA | 59.3 | 0.02 |
| mm4_intron_Phf17_chr3_41584370_R | GTCTCGTGGGCTCGGATGACAACCCGGTGTGTACC | 59.9 | 0.02 |
| mm4_intergenic_Ilkap|Hes6_chr1_91406008_F | TCGTCGGCAGCGTCAGCAAACCTGATCCCTCTGC | 60.0 | 0.01 |
| mm4_intergenic_Ilkap|Hes6_chr1_91406008_R | GTCTCGTGGGCTCGGCTCCCAGAAACCTGTGCGT | 59.9 | 0.01 |
| mm4_intron_Prkcd_chr14_30599538_F | Primer3: not found at this Tm | N.d. | 0.01 |
| mm4_intron_Prkcd_chr14_30599538_R | Primer3: not found at this Tm | N.d. | 0.01 |
| mm4_exon_Pcdh15_chr10_74631591_F | Primer3: not found at this Tm | N.d. | 0.01 |
| mm4_exon_Pcdh15_chr10_74631591_R | Primer3: not found at this Tm | N.d. | 0.01 |
| mm4_exon_Rusc1_chr3_89091214_F | TCGTCGGCAGCGTCGCTTCTTACCCACGGCGT | 60.0 | 0.01 |
| mm4_exon_Rusc1_chr3_89091214_R | GTCTCGTGGGCTCGGAAAATCGACTTGGGCTGCAG | 59.1 | 0.01 |
| mm4_exon_Krt17_chr11_100257640_F | TCGTCGGCAGCGTCCGGTTCTCTGTCTCTGCCAG | 60.1 | 0.01 |
| mm4_exon_Krt17_chr11_100257640_R | GTCTCGTGGGCTCGGGGAGTCAGCTTTGCCACTCT | 59.9 | 0.01 |
| mm4_exon_Rnf150_chr8_82863914_F | TCGTCGGCAGCGTCCAGGGAGTGAGTCGCAGC | 60.1 | 0.01 |
| mm4_exon_Rnf150_chr8_82863914_R | GTCTCGTGGGCTCGGTGTCATCTCTCTCCTCCGGG | 60.1 | 0.01 |
| mm4_intergenic_Parva|2310014F06Rik_chr7_112597411_F | TCGTCGGCAGCGTCCTGCCATTTCAGGGTCGGAA | 60.3 | 0.01 |
| mm4_intergenic_Parva|2310014F06Rik_chr7_112597411_R | GTCTCGTGGGCTCGGGGTCTGGCCTGAGAAACGAA | 59.9 | 0.01 |
| mm4_intron_Flt1_chr5_147725260_F | TCGTCGGCAGCGTCCCTCCTTTGCTCTGGTGGAG | 60.0 | 0.01 |
| mm4_intron_Flt1_chr5_147725260_R | GTCTCGTGGGCTCGGCCTCAAGGGCTAGTTGGAGC | 60.1 | 0.01 |
| mm4_intergenic_Gm12066|Gm12068_chr11_24373508_F | Primer3: not found at this Tm | N.d. | 0.00 |
| mm4_intergenic_Gm12066|Gm12068_chr11_24373508_R | Primer3: not found at this Tm | N.d. | 0.00 |
| mm3_exon_Tssc4/Trpm5_chr7_143070091_F | Primer3: not found at this Tm | N.d. | 0.00 |
| mm3_exon_Tssc4/Trpm5_chr7_143070091_R | Primer3: not found at this Tm | N.d. | 0.00 |
| mm4_intron_Rapgef1_chr2_29706221_F | TCGTCGGCAGCGTCAGCTAATGTGCGATGTGGGT | 59.7 | 0.00 |
| mm4_intron_Rapgef1_chr2_29706221_R | GTCTCGTGGGCTCGGGGAAGGCTGATTCTCTGCGT | 60.1 | 0.00 |
| mm4_intron_Masp1_chr16_23496292_F | TCGTCGGCAGCGTCCCAGCACCTGGTCTTCTGTT | 59.8 | 0.00 |
| mm4_intron_Masp1_chr16_23496292_R | GTCTCGTGGGCTCGGATGCTGCCTCATCTGCTTGT | 60.0 | 0.00 |
| mm4_intron_Cdc42bpb_chr12_111330554_F | Primer3: not found at this Tm | N.d. | 0.00 |
| mm4_intron_Cdc42bpb_chr12_111330554_R | Primer3: not found at this Tm | N.d. | 0.00 |
| mm4_intergenic_Gm26844|Gm4812_chr13_69316067_F | TCGTCGGCAGCGTCAGTGGCTGAGCTGTGATGAC | 60.0 | 0.00 |
| mm4_intergenic_Gm26844|Gm4812_chr13_69316067_R | GTCTCGTGGGCTCGGACAACTTGTGCCTACAGGAGA | 58.9 | 0.00 |
| mm4_exon_Ccdc62_chr5_123954507_F | TCGTCGGCAGCGTCCAACGTCTACCTGGGCCTTT | 59.9 | 0.00 |
| mm4_exon_Ccdc62_chr5_123954507_R | GTCTCGTGGGCTCGGCTCAGATGTTCCTGTGCGGT | 60.0 | 0.00 |
| mm4_exon_1700025G04Rik_chr1_151885856_F | TCGTCGGCAGCGTCAAGGGCTGCCTGGAATTCTC | 60.0 | 0.00 |
| mm4_exon_1700025G04Rik_chr1_151885856_R | GTCTCGTGGGCTCGGGGCAGAGATTCACATGGGGT | 59.7 | 0.00 |
| mm4_intron_Zfp536_chr7_37519268_F | Primer3: not found at this Tm | N.d. | 0.00 |
| mm4_intron_Zfp536_chr7_37519268_R | Primer3: not found at this Tm | N.d. | 0.00 |
| mm4_intron_Vps8_chr16_21430895_F | TCGTCGGCAGCGTCCAAGTCCCTTTGTGCTTGGC | 59.9 | 0.00 |
| mm4_intron_Vps8_chr16_21430895_R | GTCTCGTGGGCTCGGGTGGAACAGTGTGAACATCTGTG | 59.9 | 0.00 |
| mm4_intron_Trak1_chr9_121371653_F | Primer3: not found at this Tm | N.d. | 0.00 |
| mm4_intron_Trak1_chr9_121371653_R | Primer3: not found at this Tm | N.d. | 0.00 |
| mm4_intron_Tmem9_chr1_136025743_F | Primer3: not found at this Tm | N.d. | 0.00 |
| mm4_intron_Tmem9_chr1_136025743_R | Primer3: not found at this Tm | N.d. | 0.00 |
| mm4_intron_Tgfbr3_chr5_107120114_F | TCGTCGGCAGCGTCGAGGCAGGAGGTGACACAAG | 60.3 | 0.00 |
| mm4_intron_Tgfbr3_chr5_107120114_R | GTCTCGTGGGCTCGGTAAGCTTCGTGGCCTGAAGG | 60.0 | 0.00 |
| mm4_intron_Socs3_chr11_117969289_F | Primer3: not found at this Tm | N.d. | 0.00 |
| mm4_intron_Socs3_chr11_117969289_R | Primer3: not found at this Tm | N.d. | 0.00 |
| mm4_intron_Sh3pxd2a_chr19_47342761_F | TCGTCGGCAGCGTCCCCGCACCCAGAAAGAATCT | 60.0 | 0.00 |
| mm4_intron_Sh3pxd2a_chr19_47342761_R | GTCTCGTGGGCTCGGCCCCAAGAGCAAGAGTGAGG | 60.0 | 0.00 |
| mm4_intron_Rwdd2a_chr9_86572362_F | TCGTCGGCAGCGTCCTATGCACCTGCGCGAGAT | 60.3 | 0.00 |
| mm4_intron_Rwdd2a_chr9_86572362_R | GTCTCGTGGGCTCGGGCTAGGAAGGATGCCTGCAG | 60.5 | 0.00 |
| mm4_intron_Mfsd12_chr10_81360837_F | TCGTCGGCAGCGTCCCCTGGTGTACCCTAAAGCC | 59.7 | 0.00 |
| mm4_intron_Mfsd12_chr10_81360837_R | GTCTCGTGGGCTCGGGAGACAGGCTACACACCCAC | 60.0 | 0.00 |
| mm4_intron_Map2k5_chr9_63168165_F | Primer3: not found at this Tm | N.d. | 0.00 |
| mm4_intron_Map2k5_chr9_63168165_R | Primer3: not found at this Tm | N.d. | 0.00 |
| mm4_intron_Klhl22_chr16_17783996_F | TCGTCGGCAGCGTCTAGAAACACCTGTGGGCAGC | 60.2 | 0.00 |
| mm4_intron_Klhl22_chr16_17783996_R | GTCTCGTGGGCTCGGCTCACAAGGTGGCCTGGAAA | 60.1 | 0.00 |
| mm4_intron_Col14a1_chr15_55429686_F | Primer3: not found at this Tm | N.d. | 0.00 |
| mm4_intron_Col14a1_chr15_55429686_R | Primer3: not found at this Tm | N.d. | 0.00 |
| mm4_intron_Cntn1_chr15_92088876_F | TCGTCGGCAGCGTCGCCATTTAACCCTGCATGCC | 60.1 | 0.00 |
| mm4_intron_Cntn1_chr15_92088876_R | GTCTCGTGGGCTCGGTCATTGGTGGTGAAGAAACAACA | 58.9 | 0.00 |
| mm4_intron_Cdh13_chr8_119137573_F | Primer3: not found at this Tm | N.d. | 0.00 |
| mm4_intron_Cdh13_chr8_119137573_R | Primer3: not found at this Tm | N.d. | 0.00 |
| mm4_intron_Arhgap26_chr18_38691553_F | TCGTCGGCAGCGTCTAGAGGCCTGATCCGTTCCA | 60.0 | 0.00 |
| mm4_intron_Arhgap26_chr18_38691553_R | GTCTCGTGGGCTCGGTGGTTCCTACAGACTTGGCC | 59.3 | 0.00 |
| mm4_intron_Ankrd35_chr3_96689661_F | TCGTCGGCAGCGTCGCGGTCTCGGGTGTTCATTA | 60.1 | 0.00 |
| mm4_intron_Ankrd35_chr3_96689661_R | GTCTCGTGGGCTCGGGGGAGCCAGAAAGAGAAGCA | 59.6 | 0.00 |
| mm4_intron_Akap2_chr4_57808029_F | TCGTCGGCAGCGTCCCCCTCTTGACAGGTAGGGA | 59.9 | 0.00 |
| mm4_intron_Akap2_chr4_57808029_R | GTCTCGTGGGCTCGGCACCCCAAGTGTCAGAGACC | 59.9 | 0.00 |
| mm4_intergenic_Pla2g2e|Otud3_chr4_138893379_F | TCGTCGGCAGCGTCGCCACCTTGTGAGCTACCAT | 60.0 | 0.00 |
| mm4_intergenic_Pla2g2e|Otud3_chr4_138893379_R | GTCTCGTGGGCTCGGTTGGCACTGTTCCTCCAGTC | 59.8 | 0.00 |
| mm4_intergenic_Pard3|mmu-mir-21c_chr8_128054805_F | TCGTCGGCAGCGTCGCACACAAATGCAGGGTCAG | 60.0 | 0.00 |
| mm4_intergenic_Pard3|mmu-mir-21c_chr8_128054805_R | GTCTCGTGGGCTCGGTGAGACGGAACATCAACCACA | 59.5 | 0.00 |
| mm4_intergenic_Igkv4-86|Igkv13-84_chr6_68917551_F | Primer3: not found at this Tm | N.d. | 0.00 |
| mm4_intergenic_Igkv4-86|Igkv13-84_chr6_68917551_R | Primer3: not found at this Tm | N.d. | 0.00 |
| mm4_intergenic_Hmga2|Gm24298_chr10_120477282_F | TCGTCGGCAGCGTCGCCAGCAGTGGGGTTAAAA | 58.2 | 0.00 |
| mm4_intergenic_Hmga2|Gm24298_chr10_120477282_R | GTCTCGTGGGCTCGGAAGCTCTCCAGGGTGACTCT | 59.8 | 0.00 |
| mm4_intergenic_Gm24737|Lhfpl2_chr13_93984681_F | TCGTCGGCAGCGTCCATCGAAGGATGGCCCAAGG | 60.8 | 0.00 |
| mm4_intergenic_Gm24737|Lhfpl2_chr13_93984681_R | GTCTCGTGGGCTCGGGCTGAGTTCACATTTGCCCC | 59.7 | 0.00 |
| mm4_intergenic_Gm23847|Fgfr2_chr7_130150008_F | Primer3: not found at this Tm | N.d. | 0.00 |
| mm4_intergenic_Gm23847|Fgfr2_chr7_130150008_R | Primer3: not found at this Tm | N.d. | 0.00 |
| mm4_intergenic_Gm23120|5S_rRNA_chr11_107851510_F | TCGTCGGCAGCGTCGACTTCCCAAGCCTCTGACC | 60.0 | 0.00 |
| mm4_intergenic_Gm23120|5S_rRNA_chr11_107851510_R | GTCTCGTGGGCTCGGAAGTCTGGACCAAAGCGAGG | 59.9 | 0.00 |
| mm4_intergenic_Gm22670|Gm12434_chr4_47953890_F | TCGTCGGCAGCGTCTCTGCCCTGATGCTCTACCT | 60.0 | 0.00 |
| mm4_intergenic_Gm22670|Gm12434_chr4_47953890_R | GTCTCGTGGGCTCGGATTGAGGGCATTGGCTTGTT | 58.3 | 0.00 |
| mm4_intergenic_Gm20672|Abcg2_chr6_58545186_F | Primer3: not found at this Tm | N.d. | 0.00 |
| mm4_intergenic_Gm20672|Abcg2_chr6_58545186_R | Primer3: not found at this Tm | N.d. | 0.00 |
| mm4_intergenic_Gm14491|Gm14512_chrX_11956264_F | TCGTCGGCAGCGTCCTTTCTGTGGCACATGCAGG | 59.7 | 0.00 |
| mm4_intergenic_Gm14491|Gm14512_chrX_11956264_R | GTCTCGTGGGCTCGGTCCTCCAGGAAGGCCTTTGA | 60.4 | 0.00 |
| mm4_intergenic_Gdf15|Pgpep1_chr8_70637652_F | Primer3: not found at this Tm | N.d. | 0.00 |
| mm4_intergenic_Gdf15|Pgpep1_chr8_70637652_R | Primer3: not found at this Tm | N.d. | 0.00 |
| mm4_intergenic_Akt2-ps|Gm12663_chr11_16618265_F | TCGTCGGCAGCGTCTAGACACTGGTGGGCTCAGA | 59.8 | 0.00 |
| mm4_intergenic_Akt2-ps|Gm12663_chr11_16618265_R | GTCTCGTGGGCTCGGGCACAGATCCCTCTCAGTGG | 59.8 | 0.00 |
| mm4_intergenic_2610037D02Rik|4833422M21Rik_chr15_96218327_F | Primer3: not found at this Tm | N.d. | 0.00 |
| mm4_intergenic_2610037D02Rik|4833422M21Rik_chr15_96218327_R | Primer3: not found at this Tm | N.d. | 0.00 |
| mm4_intergenic_2410088K16Rik|Sh3bp4_chr1_88879641_F | TCGTCGGCAGCGTCTGCAGATACAAGCGATGGCA | 60.1 | 0.00 |
| mm4_intergenic_2410088K16Rik|Sh3bp4_chr1_88879641_R | GTCTCGTGGGCTCGGTGCTGAGGCCTCAACAAACA | 60.1 | 0.00 |
| mm4_exon_Lrrc24_chr15_76718359_F | TCGTCGGCAGCGTCCTGGACCAAGCCCACAAATG | 59.3 | 0.00 |
| mm4_exon_Lrrc24_chr15_76718359_R | GTCTCGTGGGCTCGGCACAACAATACCCTGCGTGC | 60.1 | 0.00 |
| mm4_exon_Lbh_chr17_72918359_F | TCGTCGGCAGCGTCGGAGAGCTTGGTCTGCACTG | 60.6 | 0.00 |
| mm4_exon_Lbh_chr17_72918359_R | GTCTCGTGGGCTCGGTGAATGAGATTGGCAGGGGC | 60.3 | 0.00 |
| mm3_intron_Drosha_chr15_12853326_F | TCGTCGGCAGCGTCATTGGTCTGGTGCTCCTGTG | 59.9 | 0.00 |
| mm3_intron_Drosha_chr15_12853326_R | GTCTCGTGGGCTCGGTGACTTCGTCATCAGCACGG | 60.3 | 0.00 |
| mm3_intergenic_Fam25c|Sncg_chr14_34357763_F | TCGTCGGCAGCGTCCAAAAGTCAGCCCACACAGC | 59.9 | 0.00 |
| mm3_intergenic_Fam25c|Sncg_chr14_34357763_R | GTCTCGTGGGCTCGGCTGGGCAAAGGGTAGTCGAG | 60.1 | 0.00 |
These only list off-targets that have primers in the table above. Primers underlined, off-targets in bold.
| ontarget_mm0_exon_5730457N03Rik/Evx1_chr6_52314138 |
GTCGATGGACTAGCAGGCAGTGCTGCAGGGCTGGGCGCCGAGCCACGGTCTGCTGGAGCGGCCATGCTTGGCCCGGGACC CCCAGTCCCCTCCGCGGACAGCCTCTCTGGCCAAGGGCAACCTAGTAGCT |
| mm4_intergenic_Asic2|4930527B05Rik_chr11_81316396 |
GGACCAATGGCACTGTCTCAAGTGGGTTGGCCCCATCCTTGGACAGCTTCCCTGGTGCCAGTAGAAATGACTGGCATTTT CTAATTGGTCAACTTAAACAGCCCTTCATGTTCAGTGT |
| mm4_intron_Kctd10_chr5_114376800 |
GCAGTCATGACCAAACACATCCTCCAGAGATACTGTCCACGGGTGGCAGGATATTCTAGGAAGAAAGCATTTCCCAAAAC TTTGATGACCTGGGGGCAAAAGAAAGGCTCACTGGTGTGTTTGTGTGTGGTGG |
| mm4_intergenic_Pitpnb|Mn1_chr5_111398283 |
TTGTGTGGAGCTCCGTGTACTGGGTTTTTTCTGTTCTCATTCTGGCATCCCTTCCTGAGGCCCTTTCCATCCACGGGCAG CCCCTCTGCGTCTTTCCTGATCCCTCTGCCAGCGCTGCACGAGAGGGAGATGTTG |
| mm4_exon_Nacc2/Gm13554_chr2_26060073 |
CTTCTTGTTGCTGTGGCCACTGGTGTCTGAGGCCTACTGGAGCTGGTGTTGCCCTGCTCAAAGGCCTGAGGGGAGCTCTG GCCATCAGCGGGCAGCTGCTCTGGGGCAGCCACCTCCTGGATAACAGAGCCACCC |
| mm4_intron_Themis2_chr4_132792839 |
CCCCTAGTGTAGCCCTCAGGCTTCTTCCTTACTTCTCCCTGCTAAAGGGCAGCTGGCTCAGCCGGCCATCCTCGGACAGC TTCCCCGGTCTTCACTGACCACCACAGGCCTGATGGTGCACTTTCTCCTGGCTCT |
| mm4_intron_Prkce_chr17_86418257 |
CAAGGGTTGGGCCTCTATGGCTAATCAGTAATAGGCTGTGGCTATCCATCTCCAGGGAAGGTGTCCGCGTAGGGACAGGG GATGCACCACAGGTGCAAGCTGGGTAAGA |
| mm4_intron_Lmx1a_chr1_167789815 |
GGCCATACAGCACACTCCTTCCAATCCTGCAGATCGCATCCTGTCCTGGGAGGCTGTCCGTGGGTGGCTCCAGGATCCAT GGCAGATGACCTTGTTAATCTTTTTCAAGCTTTGGCTTCCTCCACTCAAAGCT |
| mm4_intron_Fryl_chr5_73052957 |
CAGTGGATGAGCTCTGACGGGCTAAGAGCATCAGGAAAAGCAACTTCTCCCCTCCGCGGAGAGCACCCCTGGAACTAATC TATACTTGCCCAAAAACATTGCTATGGGGGTGCATGAGATCACAGA |
| mm4_intergenic_Gm833|Gm25779_chr4_152790533 |
CAGGAGAGGAACACCTGCTCTTCATGACCTGAGCTCCCTGCTGCAGGAAGACCTTCCACGGACAGCCACTCAGACTCAGT CTCAGTCTACGCGGGAAGA |
| mm4_intron_Nfyb_chr10_82758839 |
GCGTTCACTTGTCTGAAGCCAACAGCAGCAGCAACACTCCTTCAGCTGACAGCCTCTCTTAGTGTGTGATGACTGTGTCT CTCATGTGCTAGTGACTGCTCCATGGG |
| mm4_exon_Scn3b_chr9_40269328 |
TTGATCACCCAATCGCCCAGCATCGGGGCTTCGCAGGATCCAGAGACGCGCCCCGCGGAAGGGGGTCCCCCCCTCTACCC AGCCTCCACCTCTGAGATCGCCAGTC |
| mm4_intergenic_Osbpl3|Gm26289_chr6_50457480 |
TCTCTGAGGCTCTTTCTCACATCTGTATAAACCATGTTTCATTCACTAGGTTTGGATATTCACTTTCTGGAACCTTCCAC GGATACACTCTCTGGAACTGTCTTTGGCTCTGCCAGGTGGCCGGGGAAGTTTGACGAAGA |
| mm4_intergenic_1700041M05Rik|Grik3_chr4_125396722 |
TGGCATATCACCCCAAAGCATCTTGCTTTCACACATGCCTGTTGGCTTTAGCAAGGGGCTTCGTGACCCCAGAGAAGCTC TCCGCTGCTGGCCCCCCAGGTGGCCCTTCTGCATGTGCCTTCTGGACAGCTC |
| mm4_intergenic_Klf11|Cys1_chr12_24665396 |
ATACCTGGTACCTGGGCAGTACAGGAGATGCTCCTGTAGGCTGCAGTGATACCCAAGCCCACCTCGTGCAGCCTCTCTGG AGCCTGAGTTTCCCAGGATCACAGCTCATCAGTCGGC |
| mm4_exon_Micall1_chr15_79120773 |
CGGTAACTGTACCCCGTTCCCTGCAGGGTGACGACCTCTCCCCAGACAGCCTGTCCGAGCAGGGCAAACAGCAGCCCCCG AGCAGCGCATGCGCAGCCTGTGGGCAGCGGGTGCACCTGGTGCAGCGGTACTTGG |
| mm4_intron_Ccdc85c_chr12_108208831 |
GGTTGTCCTCAGTTAGGCCCAGGGCCTTCCACTGACAGCCTGTCTGCCAAGCCCGTTTCTCTCAGGCCATCTGGCAAGGA AGCTTACCAGGGTCTCACAGGCTGATGACAGCTGTGCTGGCATAGGCATGGAGCGATCT |
| mm4_intron_Mxi1_chr19_53348159 |
AATCTGGTGTCCCTCTGTGCCAGAGGTACAGCACTGCAGAAGTCATAGGCTAGGACCCTCCTTACGGCAGGGTCCAACCA TCTGCTGACAGCCTCGCAGGAGCTGTCAGGCCTCACAGCTCTCTTC |
| mm4_intergenic_Rnf130|Mir340_chr11_50058302 |
AGTGGCTTTAAGTCTGGGCTAAAGATGGGTATGGATAGGAACAGAGGTTGACGTAACCAGAGTGGCTGGCCATGGAGGGA TGGGCGAGGTAATTACAGGC |
| mm4_intergenic_Mrpl36|Lpcat1_chr13_73416792 |
AAAGAGGTGGATGTCCGCTGCTGACCCAAATGCAAGTCCCACTACTGACAGCCTCTCTGGGACTTTCCACCCAGGGGCTG CTGTCCTGAGCTCCCAGAATCCCTAGCTAATGGCAGGTGAGGTG |
| mm4_exon_Stk11ip_chr1_75529128 | TCCAGCCATAGAGGACGACACTAAGGAATCGCCAGAGAAGGTGTCAGAGGAAGGCAGGGTGGAGCCAGAGCC |
| mm4_intergenic_Wdr20a|Stk30_chr12_110797404 |
CACTGGACAGTTGGACCCTCCTGTCTGTCCTGCTTGCCCACCGCAGACAACCTTTCTGGTGACTCGAGAAAGCAGCTGCC CTGTAG |
| mm4_intron_Rps6kc1_chr1_190723236 |
GGGAGGGAAGAGCCATGAAAACAGGAAACACAGAGAAGAGAATATNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCAAG GAGGCCTGGCCCTGCCGCCAGAGAGGAGGTCAGAGGAAGGGGTCATGAGCTCATCCACCC |
| mm4_intron_Ppp1r16a_chr15_76671926 |
GTGAGGGGCCTGCAGAAGGGGCGCCAGCGAGGCGGCCAGCGGAGGGTGGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNGAAACCTATCAGTGAAGGAAGTTCTTGCAACCTGTTGGTCGGGCAAATCCAT |
| mm3_intergenic_Spata2|Rnf114/Spata2_chr2_167492119 |
GGGCCTTCCAAAGCTCTGAAAACAACCTTGGCTGTGCTGGAGCCTGGCTTCCCTCCCCGGAGAGCCTCTCTCGGTTCTGA AGGGAGCCAAGTCCCCTCTCTA |
| mm4_intergenic_Mtx3|Cmya5_chr13_92987491 |
TGTGTGGCTCTTTCCTGTCCCCTCATCTCTTCATAATGCTTCCTAAAAGAGCTGAACTCCGGCACCCCCTTCCCTGGAAA ACCTCTCTGGATCTTGGACTGACGCCGGCATTCCCGGCATCCCCTCCGTGATGCTTA |
| mm4_intron_Phf17_chr3_41584370 |
CAGAAGGTGGAGTGAGTTGGACCATAGAGGCTGGCCGAGCAAGGCTGCAAGAGCTGAGGCAGATGGAGGCTCCTTCCCAG GGTACACACCGGGTTGTCAT |
| mm4_intergenic_Ilkap|Hes6_chr1_91406008 |
AGCAAACCTGATCCCTCTGCAACTCAGCAGAACGCGGCCGCTCCTCCTTCGGCTGCCAGCCCCTCTGGCGCCCNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNTGCTCACGCACAGGTTTCTGGGAG |
| mm4_exon_Rusc1_chr3_89091214 |
GCTTCTTACCCACGGCGTGCGCGCGCGGTTCCTCCGGCTCCTGCGAGGCGGATGCCTCCTCACCAGCCCGGGGGCTGGCC GCCCTGCCCTCCTCCGACAGCCCCTCTGCAATAGGCTGCAGCCCAAGTCGATTTT |
| mm4_exon_Krt17_chr11_100257640 |
CGGTTCTCTGTCTCTGCCAGGCTGCCCTCCAGAGATGCTTTCTGCGGGAGGACAGGTGGTAGTCAGTGAGAGTGGCAAAG CTGACTCC |
| mm4_exon_Rnf150_chr8_82863914 |
CAGGGAGTGAGTCGCAGCGACAGGAGAACCAGAGTGGCTGCCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNACCCCGGAGGAGAGAGATGACA |
| mm4_intergenic_Parva|2310014F06Rik_chr7_112597411 |
CTGCCATTTCAGGGTCGGAATATCCAGAGAGGCCCTCTGTGGAGGGGGCTTATATCCCCCATGAGACCCTTTTCTTGCAG GTCAGGTTCCCATTCGTTTCTCAGGCCAGACC |
| mm4_intron_Flt1_chr5_147725260 |
CCTCCTTTGCTCTGGTGGAGCGAGCTCATCGCTAACGACCCCACCTCTGTCCAGCCCCGGGCAGCCTCTCTGACATCTAG CTTGCTCCAACTAGCCCTTGAGG |
| mm4_intron_Rapgef1_chr2_29706221 |
AGCTAATGTGCGATGTGGGTCAGGCCCACAGAACTCCCAAGTAGAGCCCTGCTATGGGTAGTTCCCGGTGCTCAGAACAG AGCCTGCTGCAGGCAGCCTCTCTGGAACGCAGAGAATCAGCCTTCC |
| mm4_intron_Masp1_chr16_23496292 |
CCAGCACCTGGTCTTCTGTTTCTACCTTTGGGGACAAAGTGAAAAGGAATAAAATGAGTGCCTTCCCCTGTCAGCCTCTC TCGGGTTCTTCAAGAAGACTGAGAACAGGTCTGCCCACAAGCAGATGAGGCAGCAT |
| mm4_intergenic_Gm26844|Gm4812_chr13_69316067 |
AGTGGCTGAGCTGTGATGACCATGTTTCCATCCCCTGACACCTTCTCTGGACATCAGAGACTGTGGTCTATGAGTAATCT CCTGTAGGCACAAGTTGT |
| mm4_exon_Ccdc62_chr5_123954507 |
CAACGTCTACCTGGGCCTTTCCAGCTGCTCAAAACAGCCAGACAGGCTGGACGGGGATGGCCACGACCGCACAGGAACAT CTGAG |
| mm4_exon_1700025G04Rik_chr1_151885856 |
AAGGGCTGCCTGGAATTCTCAAGCAGAGAGGCGCAGCCCTGTGGCTGGAAAAGCCGCCCTCAGCCTCCAGCCTCTCTGGG GACCTCACCCCATGTGAATCTCTGCC |
| mm4_intron_Vps8_chr16_21430895 |
CAAGTCCCTTTGTGCTTGGCAGCCACCACAGAAAGCACCAGTTCCCACTCTTAACAGAACAGAGAGGCTGTTCTGGGAAG GCAATGCGAACAACACAGATGTTCACACTGTTCCAC |
| mm4_intron_Tgfbr3_chr5_107120114 |
GAGGCAGGAGGTGACACAAGATGAGTCAGTCTGACAGAGAGGCAGTCCTGGGAAGGAACACAGAACGAGAAACCAGGAAG AGCCTGGTGGAAGTTACAATGGCAGGTCAACCCTTCAGGCCACGAAGCTTA |
| mm4_intron_Sh3pxd2a_chr19_47342761 | CCCGCACCCAGAAAGAATCTTCTAACCCTCTAGGGACAGCCTCTCTGTCAGAGGATAACCTCACTCTTGCTCTTGGGG |
| mm4_intron_Rwdd2a_chr9_86572362 |
CTATGCACCTGCGCGAGATGCTGCACCCCACTGCGGTCCGGGGAGGCTGTCCTCCGAGGGGGCCTGCGGATGGGGGCTGG CGGCGGGGATGACCTAGAGCCCTCCCCTCCGCACTGCAGGCATCCTTCCTAGC |
| mm4_intron_Mfsd12_chr10_81360837 |
CCCTGGTGTACCCTAAAGCCAGCTTCCTATGACCTGATTATGCTGGGCCCTCCAGGGACAGCCTCTCTTCAAAGGAACTC CAGCAGACCAAGTTGTCATGTGATCCCTCTGTTCTGTAGTGGGTGTGTAGCCTGTCTC |
| mm4_intron_Klhl22_chr16_17783996 |
TAGAAACACCTGTGGGCAGCCTGTGGCAGACATTTGGGTAGATCCAAACCCTAGAGAGGCTGTACCTGGAAGGGAGATTC CTTACTTCATTTCCAGGCCACCTTGTGAG |
| mm4_intron_Cntn1_chr15_92088876 |
GCCATTTAACCCTGCATGCCCACCCATCCCAGCACAGCCTCTCTGCTCTTCATTGCTGTTATGTTCTTTGTGTTGTTTCT TCACCACCAATGA |
| mm4_intron_Arhgap26_chr18_38691553 | TAGAGGCCTGATCCGTTCCAAGATCCCCTCCGAGGACTGCCTTTCTGAAGGCAAAGGCCAAGTCTGTAGGAACCA |
| mm4_intron_Ankrd35_chr3_96689661 |
GCGGTCTCGGGTGTTCATTAAGCAAATCCAGAGAGGCTGTGTGTGAATGGGAGGAGGAGCCGCTTCTGCTTCTCTTTCTG GCTCCC |
| mm4_intron_Akap2_chr4_57808029 |
CCCCTCTTGACAGGTAGGGATCCCCAGAGAGGCTGTGAGCAAACGGCCTGCCAAGCTGCGCTGTACCTTGAGCCTGGGTC TCTGACACTTGGGGTG |
| mm4_intergenic_Pla2g2e|Otud3_chr4_138893379 |
GCCACCTTGTGAGCTACCATGACATTCTCGGGTAGCAGCCGGGACACAGCCAGGAGGCTGACAGGTTCCCTTCCCAGGAC AGCTTCTCTGAGACTGGAGGAACAGTGCCAA |
| mm4_intergenic_Pard3|mmu-mir-21c_chr8_128054805 |
GCACACAAATGCAGGGTCAGGACCAGCCAGGAAGAGACTGTACCTTACATTTGGGAAGTTCCCAGAGAGGCTGACCTCTC AAGGGTCTTACTCAGGAGACACCCTAAGTGTTCAGTTTGTGGTTGATGTTCCGTCTCA |
| mm4_intergenic_Hmga2|Gm24298_chr10_120477282 |
GCCAGCAGTGGGGTTAAAAAGACAGGGCCTAGGCTCTCCTGCCGGATCGCCGCTGGAGGCCACCCCTGAGCGGCTGTCCT AGGAAGGCGAAAGAAAATGACTATCTCAGAGTCACCCTGGAGAGCTT |
| mm4_intergenic_Gm24737|Lhfpl2_chr13_93984681 |
CATCGAAGGATGGCCCAAGGGCACACCAGAAAGGCTTTCCCAGGATGGCTGGGGCATGCTCATTAGAAGTCTGTTTAATG AGGGCTGGCACAGTCAGCGAGGGGCAAATGTGAACTCAGC |
| mm4_intergenic_Gm23120|5S_rRNA_chr11_107851510 |
GACTTCCCAAGCCTCTGACCCATTTAATCCATCCTCGCACGGCTTCTCTGGCCTAGAATGTCCCTCGCTTTGGTCCAGAC TT |
| mm4_intergenic_Gm22670|Gm12434_chr4_47953890 |
TCTGCCCTGATGCTCTACCTGAGCACAACAGTTTCTCTACAAGAGAAGCTGTCCTCAGAAGGGAAGGAGAGTTAAGTGTG AGTTTCACAGTAAGTGAAGCATGAAGACAAACACAATTTAACAAGCCAATGCCCTCAAT |
| mm4_intergenic_Gm14491|Gm14512_chrX_11956264 |
CTTTCTGTGGCACATGCAGGTGTCCAAATAGGCTGGCCCCGGAAGGCTGGTCCTGGGTCTAGAACTGACACCATGCCTTA GAAAAGGAAAGCTATCCCAAGGTCAAGACCTCATCAAAGGCCTTCCTGGAGGA |
| mm4_intergenic_Akt2-ps|Gm12663_chr11_16618265 |
TAGACACTGGTGGGCTCAGATGCTTCCCAGAGAGGCTGTAACAGGATGGGAGCACCCTAGTGGCCCACCCATCCATTCTT ATCAACATAGAAAGATGAGATAAGGTACAAGGTCCACTGAGAGGGATCTGTGC |
| mm4_intergenic_2410088K16Rik|Sh3bp4_chr1_88879641 |
TGCAGATACAAGCGATGGCATGCCCTGCTTACGGCCCTCCTGGGACTGCCACTCTGGTAAAAATAAAATGCCAATGTTTG TTGAGGCCTCAGCA |
| mm4_exon_Lrrc24_chr15_76718359 |
CTGGACCAAGCCCACAAATGCGCCGCCACGCAATCCCCGAAGCCGGTTGCCAGTGAGCGCCAGTTCAAGCAGGCGAGGCT GTGCGCGGAAGGCACCGGACTCCAGCGCACGCAGGGTATTGTTGTG |
| mm4_exon_Lbh_chr17_72918359 |
GGAGAGCTTGGTCTGCACTGCCTACGCCGTTGGCAGCGAGGCTGTCTCCGGAAGGCGGACCGGCGCTAGCCCAGTACCCG CTCTCGGCTGCCCGCTGCTCTCCTCTGCGCCCCTGCCAATCTCATTCA |
| mm3_intron_Drosha_chr15_12853326 | ATTGGTCTGGTGCTCCTGTGCTTCTTCCAGAGACGCTGTCCTCTGATGGCACCGTGCTGATGACGAAGTCA |
| mm3_intergenic_Fam25c|Sncg_chr14_34357763 |
CAAAAGTCAGCCCACACAGCCCAAGGTGCTGTTCCTTCCCCCTGCCCTTCAGGCCCTGCTGCCCAGGAACACTGCCCTTC CTAGGACAGCGTCTCTGGGTGAGCACTCCAGTGATGTCACTCGACTACCCTTTGCCCAG |