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Contents:In the table below, Illumina Nextera Handle sequences have been added and highlighted in bold. Primers for the on-target have been added for convenience. The table below is sorted by the CFD off-target score. Sites with very low CFD scores < 0.02 are unlikely to be cleaved, see our study Haeussler et al. 2016, Figure 2.
In the protocol by Matthew Canver, Harvard, two PCRs are run: one PCR to amplify the potential off-target, then a second PCR to extend the handles with Illumina barcodes. Please click here to download the protocol. Alternatively, you can have a look at Fu et al, 2014.
If a primer was not found, the reason is usually that the region around the off-target is too repetitive. To avoid unspecific primers, all repeats are masked for the primer design (not for off-target search). If you think that we should change the parameters here or should use different primer3 settings, please let us know.
| Name | Primer Sequence | Tm | CFD Score |
|---|---|---|---|
| ontarget_mm0_exon_5730457N03Rik/Evx1_chr6_52314122_F | Primer3: not found at this Tm | N.d. | 1.00 |
| ontarget_mm0_exon_5730457N03Rik/Evx1_chr6_52314122_R | Primer3: not found at this Tm | N.d. | 1.00 |
| mm4_intergenic_Rbfox1|Gm23476_chr16_7895343_F | Primer3: not found at this Tm | N.d. | 0.75 |
| mm4_intergenic_Rbfox1|Gm23476_chr16_7895343_R | Primer3: not found at this Tm | N.d. | 0.75 |
| mm4_intergenic_Stx1b|Stx1b/Stx4a_chr7_127816451_F | TCGTCGGCAGCGTCGTTGGGCGGAAGGTACAAGA | 59.9 | 0.73 |
| mm4_intergenic_Stx1b|Stx1b/Stx4a_chr7_127816451_R | GTCTCGTGGGCTCGGTGAACCCTGGCACTGCTTAG | 59.9 | 0.73 |
| mm3_exon_Mlc1_chr15_88958084_F | TCGTCGGCAGCGTCGAAGGCAGGCTACTCACCTC | 59.8 | 0.71 |
| mm3_exon_Mlc1_chr15_88958084_R | GTCTCGTGGGCTCGGGTGAGCTTCAAAGTCAGCGC | 60.1 | 0.71 |
| mm4_intergenic_Gm9897|Fzd1_chr5_4248550_F | Primer3: not found at this Tm | N.d. | 0.63 |
| mm4_intergenic_Gm9897|Fzd1_chr5_4248550_R | Primer3: not found at this Tm | N.d. | 0.63 |
| mm4_intron_Fbln2_chr6_91228586_F | Primer3: not found at this Tm | N.d. | 0.63 |
| mm4_intron_Fbln2_chr6_91228586_R | Primer3: not found at this Tm | N.d. | 0.63 |
| mm4_intron_B4galnt2_chr11_95902315_F | Primer3: not found at this Tm | N.d. | 0.61 |
| mm4_intron_B4galnt2_chr11_95902315_R | Primer3: not found at this Tm | N.d. | 0.61 |
| mm4_intron_Acpp_chr9_104316856_F | Primer3: not found at this Tm | N.d. | 0.58 |
| mm4_intron_Acpp_chr9_104316856_R | Primer3: not found at this Tm | N.d. | 0.58 |
| mm4_intergenic_A430105J06Rik|Gm3809_chr1_186846946_F | Primer3: not found at this Tm | N.d. | 0.56 |
| mm4_intergenic_A430105J06Rik|Gm3809_chr1_186846946_R | Primer3: not found at this Tm | N.d. | 0.56 |
| mm4_intron_Fgf2_chr3_37400969_F | Primer3: not found at this Tm | N.d. | 0.56 |
| mm4_intron_Fgf2_chr3_37400969_R | Primer3: not found at this Tm | N.d. | 0.56 |
| mm3_intergenic_Snap91|Ripply2_chr9_87009687_F | Primer3: not found at this Tm | N.d. | 0.55 |
| mm3_intergenic_Snap91|Ripply2_chr9_87009687_R | Primer3: not found at this Tm | N.d. | 0.55 |
| mm4_intergenic_mmu-mir-6348|mmu-mir-6354_chr1_169003140_F | TCGTCGGCAGCGTCCCGAGCATAGCAGTGAGGAT | 59.3 | 0.55 |
| mm4_intergenic_mmu-mir-6348|mmu-mir-6354_chr1_169003140_R | GTCTCGTGGGCTCGGTTCCAGCTTACCACAGGGAC | 59.3 | 0.55 |
| mm4_intergenic_B930078G14Rik|Fam155a_chr8_8934150_F | Primer3: not found at this Tm | N.d. | 0.54 |
| mm4_intergenic_B930078G14Rik|Fam155a_chr8_8934150_R | Primer3: not found at this Tm | N.d. | 0.54 |
| mm4_intergenic_Gm24912|Kcnk16_chr14_20224990_F | TCGTCGGCAGCGTCTTGAGCCTCAGACTGGGACA | 60.4 | 0.53 |
| mm4_intergenic_Gm24912|Kcnk16_chr14_20224990_R | GTCTCGTGGGCTCGGGGAAGGGGCCAAAGGATGAA | 59.9 | 0.53 |
| mm4_intergenic_Tgfbi|SMAD5-AS1_1_chr13_56654094_F | Primer3: not found at this Tm | N.d. | 0.50 |
| mm4_intergenic_Tgfbi|SMAD5-AS1_1_chr13_56654094_R | Primer3: not found at this Tm | N.d. | 0.50 |
| mm4_intergenic_Gm5784|Gm6802_chr12_19425309_F | Primer3: not found at this Tm | N.d. | 0.46 |
| mm4_intergenic_Gm5784|Gm6802_chr12_19425309_R | Primer3: not found at this Tm | N.d. | 0.46 |
| mm4_intergenic_Gm3993|Gm10479_chr12_20267804_F | TCGTCGGCAGCGTCAAACAAGTGGGAGGTGGCTG | 60.4 | 0.46 |
| mm4_intergenic_Gm3993|Gm10479_chr12_20267804_R | GTCTCGTGGGCTCGGCATACCTAGCCCTGGCCATG | 59.9 | 0.46 |
| mm4_intergenic_Gm3944|Gm5784_chr12_19211927_F | Primer3: not found at this Tm | N.d. | 0.46 |
| mm4_intergenic_Gm3944|Gm5784_chr12_19211927_R | Primer3: not found at this Tm | N.d. | 0.46 |
| mm4_intergenic_Gm20474|Gm10330_chr12_23757997_F | Primer3: not found at this Tm | N.d. | 0.46 |
| mm4_intergenic_Gm20474|Gm10330_chr12_23757997_R | Primer3: not found at this Tm | N.d. | 0.46 |
| mm4_intergenic_Gm20474|Gm10330_chr12_23742990_F | Primer3: not found at this Tm | N.d. | 0.46 |
| mm4_intergenic_Gm20474|Gm10330_chr12_23742990_R | Primer3: not found at this Tm | N.d. | 0.46 |
| mm4_intergenic_Gm20474|Gm10330_chr12_23719776_F | TCGTCGGCAGCGTCCAGCCCTGGCCATGAAACTA | 60.0 | 0.46 |
| mm4_intergenic_Gm20474|Gm10330_chr12_23719776_R | GTCTCGTGGGCTCGGAAACAAGTGGGAGGTGGCTG | 60.4 | 0.46 |
| mm4_intergenic_2410018L13Rik|Gm26140_chr12_23098909_F | TCGTCGGCAGCGTCCAGCCCTGGCCATGAAACTA | 60.0 | 0.46 |
| mm4_intergenic_2410018L13Rik|Gm26140_chr12_23098909_R | GTCTCGTGGGCTCGGAAACAAGTGGGAGGTGGCTG | 60.4 | 0.46 |
| mm4_intron_Tph2_chr10_115132358_F | Primer3: not found at this Tm | N.d. | 0.45 |
| mm4_intron_Tph2_chr10_115132358_R | Primer3: not found at this Tm | N.d. | 0.45 |
| mm4_intron_Galnt18_chr7_111679731_F | TCGTCGGCAGCGTCAATAGACTCCCAGCCAGCCT | 60.3 | 0.45 |
| mm4_intron_Galnt18_chr7_111679731_R | GTCTCGTGGGCTCGGTGTCTCCCTCACACCATCCT | 59.8 | 0.45 |
| mm4_intergenic_Sox2ot|Gm20446_chr3_34212140_F | TCGTCGGCAGCGTCGCTGGAACTAGCTCCCCTTG | 60.1 | 0.43 |
| mm4_intergenic_Sox2ot|Gm20446_chr3_34212140_R | GTCTCGTGGGCTCGGAGACTGGGTGCAAGCTACAC | 59.9 | 0.43 |
| mm3_intergenic_Cdc16|Upf3a_chr8_13785385_F | Primer3: not found at this Tm | N.d. | 0.42 |
| mm3_intergenic_Cdc16|Upf3a_chr8_13785385_R | Primer3: not found at this Tm | N.d. | 0.42 |
| mm4_intergenic_Ajap1|Gm25880_chr4_153867446_F | TCGTCGGCAGCGTCGGAGCTAGGAGAGGGAGCTT | 60.1 | 0.42 |
| mm4_intergenic_Ajap1|Gm25880_chr4_153867446_R | GTCTCGTGGGCTCGGTCCAATGGGGAACACAAGGG | 59.8 | 0.42 |
| mm4_intergenic_Gm22891|Gm24774_chr14_83059274_F | Primer3: not found at this Tm | N.d. | 0.41 |
| mm4_intergenic_Gm22891|Gm24774_chr14_83059274_R | Primer3: not found at this Tm | N.d. | 0.41 |
| mm4_intergenic_Gm25813|Gm23666_chr8_52741973_F | Primer3: not found at this Tm | N.d. | 0.41 |
| mm4_intergenic_Gm25813|Gm23666_chr8_52741973_R | Primer3: not found at this Tm | N.d. | 0.41 |
| mm4_intergenic_Gm25495|Gm23225_chr14_90584438_F | Primer3: not found at this Tm | N.d. | 0.41 |
| mm4_intergenic_Gm25495|Gm23225_chr14_90584438_R | Primer3: not found at this Tm | N.d. | 0.41 |
| mm4_intron_Man1c1_chr4_134605155_F | Primer3: not found at this Tm | N.d. | 0.39 |
| mm4_intron_Man1c1_chr4_134605155_R | Primer3: not found at this Tm | N.d. | 0.39 |
| mm4_intergenic_Tab2|Ust_chr10_8186020_F | TCGTCGGCAGCGTCCATTCCTCTTACCTCCGGCC | 59.8 | 0.39 |
| mm4_intergenic_Tab2|Ust_chr10_8186020_R | GTCTCGTGGGCTCGGGAGACTGGTGGAGGGGTTTG | 59.9 | 0.39 |
| mm4_intergenic_Gm25143|Gm6763_chr10_104084591_F | Primer3: not found at this Tm | N.d. | 0.38 |
| mm4_intergenic_Gm25143|Gm6763_chr10_104084591_R | Primer3: not found at this Tm | N.d. | 0.38 |
| mm4_intergenic_Fbxo24/Pcolce|Gm16089_chr5_137613898_F | TCGTCGGCAGCGTCGATGGGGCGTTGCAGATAGT | 60.1 | 0.38 |
| mm4_intergenic_Fbxo24/Pcolce|Gm16089_chr5_137613898_R | GTCTCGTGGGCTCGGCCAAGCCTTCCATTCAGCCT | 60.3 | 0.38 |
| mm4_intergenic_Kidins220|Id2_chr12_25079636_F | Primer3: not found at this Tm | N.d. | 0.37 |
| mm4_intergenic_Kidins220|Id2_chr12_25079636_R | Primer3: not found at this Tm | N.d. | 0.37 |
| mm4_exon_Tsga10ip_chr19_5394310_F | Primer3: not found at this Tm | N.d. | 0.36 |
| mm4_exon_Tsga10ip_chr19_5394310_R | Primer3: not found at this Tm | N.d. | 0.36 |
| mm3_intron_Fggy_chr4_95627675_F | Primer3: not found at this Tm | N.d. | 0.34 |
| mm3_intron_Fggy_chr4_95627675_R | Primer3: not found at this Tm | N.d. | 0.34 |
| mm3_intergenic_Gm3235|Fto_chr8_91654079_F | Primer3: not found at this Tm | N.d. | 0.33 |
| mm3_intergenic_Gm3235|Fto_chr8_91654079_R | Primer3: not found at this Tm | N.d. | 0.33 |
| mm4_intergenic_Ogg1/Camk1|Camk1_chr6_113336306_F | TCGTCGGCAGCGTCGCAGAGTTGCCTGTGAGGAT | 60.0 | 0.33 |
| mm4_intergenic_Ogg1/Camk1|Camk1_chr6_113336306_R | GTCTCGTGGGCTCGGCATGGTGAGAGCTCCCACTC | 59.8 | 0.33 |
| mm4_exon_Col5a3_chr9_20779962_F | Primer3: not found at this Tm | N.d. | 0.32 |
| mm4_exon_Col5a3_chr9_20779962_R | Primer3: not found at this Tm | N.d. | 0.32 |
| mm4_intergenic_Mir466f-4|Irx1_chr13_71281334_F | Primer3: not found at this Tm | N.d. | 0.31 |
| mm4_intergenic_Mir466f-4|Irx1_chr13_71281334_R | Primer3: not found at this Tm | N.d. | 0.31 |
| mm4_intergenic_Gm11195|Slc46a1_chr11_78455941_F | Primer3: not found at this Tm | N.d. | 0.29 |
| mm4_intergenic_Gm11195|Slc46a1_chr11_78455941_R | Primer3: not found at this Tm | N.d. | 0.29 |
| mm4_intergenic_Cdkl5|Scml2_chrX_161046304_F | Primer3: not found at this Tm | N.d. | 0.29 |
| mm4_intergenic_Cdkl5|Scml2_chrX_161046304_R | Primer3: not found at this Tm | N.d. | 0.29 |
| mm4_intron_Gm21887_chrX_170009701_F | TCGTCGGCAGCGTCCTCCAGGGTCCCCGGTTC | 61.4 | 0.29 |
| mm4_intron_Gm21887_chrX_170009701_R | GTCTCGTGGGCTCGGTTGTACGTCACGGTTCTGCA | 59.8 | 0.29 |
| mm4_intergenic_Gm21857|Erdr1_chrY_90784617_F | TCGTCGGCAGCGTCCTCCAGGGTCCCCGGTTC | 61.4 | 0.29 |
| mm4_intergenic_Gm21857|Erdr1_chrY_90784617_R | GTCTCGTGGGCTCGGTTGTACGTCACGGTTCTGCA | 59.8 | 0.29 |
| mm4_intergenic_Gm15208|Bcl11b_chr12_107824878_F | TCGTCGGCAGCGTCGTCTGTCCACTCCACACAGG | 59.9 | 0.28 |
| mm4_intergenic_Gm15208|Bcl11b_chr12_107824878_R | GTCTCGTGGGCTCGGGTCTTCAGGAGGCAGCTCTG | 60.1 | 0.28 |
| mm4_intergenic_Nkx2-6|Nkx3-1_chr14_69186795_F | Primer3: not found at this Tm | N.d. | 0.28 |
| mm4_intergenic_Nkx2-6|Nkx3-1_chr14_69186795_R | Primer3: not found at this Tm | N.d. | 0.28 |
| mm3_intergenic_Gm23727|Gm20594_chr6_79418743_F | Primer3: not found at this Tm | N.d. | 0.28 |
| mm3_intergenic_Gm23727|Gm20594_chr6_79418743_R | Primer3: not found at this Tm | N.d. | 0.28 |
| mm3_intergenic_Gm13323|H2afb1_chr2_17897019_F | Primer3: not found at this Tm | N.d. | 0.28 |
| mm3_intergenic_Gm13323|H2afb1_chr2_17897019_R | Primer3: not found at this Tm | N.d. | 0.28 |
| mm4_intron_Ccbl2_chr3_142719185_F | Primer3: not found at this Tm | N.d. | 0.28 |
| mm4_intron_Ccbl2_chr3_142719185_R | Primer3: not found at this Tm | N.d. | 0.28 |
| mm4_intergenic_Gm23229|Syt17_chr7_118311625_F | Primer3: not found at this Tm | N.d. | 0.27 |
| mm4_intergenic_Gm23229|Syt17_chr7_118311625_R | Primer3: not found at this Tm | N.d. | 0.27 |
| mm4_intron_Dync1li1_chr9_114689392_F | TCGTCGGCAGCGTCACATCCGTTCGCCCACTG | 60.0 | 0.27 |
| mm4_intron_Dync1li1_chr9_114689392_R | GTCTCGTGGGCTCGGAGGGAGGAGAAAAGACCGGA | 59.8 | 0.27 |
| mm4_intergenic_D1Ertd622e|Ppip5k2_chr1_97676987_F | Primer3: not found at this Tm | N.d. | 0.26 |
| mm4_intergenic_D1Ertd622e|Ppip5k2_chr1_97676987_R | Primer3: not found at this Tm | N.d. | 0.26 |
| mm4_intron_Dnah8_chr17_30707514_F | TCGTCGGCAGCGTCCCATGATGCCACTGGACCTT | 60.0 | 0.26 |
| mm4_intron_Dnah8_chr17_30707514_R | GTCTCGTGGGCTCGGAGAGGGAAGAAGAAAGGCGC | 60.0 | 0.26 |
| mm4_intergenic_A930031H19Rik|Gm25261_chr4_131121387_F | Primer3: not found at this Tm | N.d. | 0.26 |
| mm4_intergenic_A930031H19Rik|Gm25261_chr4_131121387_R | Primer3: not found at this Tm | N.d. | 0.26 |
| mm4_intron_B3galtl_chr5_149734519_F | Primer3: not found at this Tm | N.d. | 0.26 |
| mm4_intron_B3galtl_chr5_149734519_R | Primer3: not found at this Tm | N.d. | 0.26 |
| mm3_intergenic_Gm24444|Mgmt_chr7_136725276_F | Primer3: not found at this Tm | N.d. | 0.26 |
| mm3_intergenic_Gm24444|Mgmt_chr7_136725276_R | Primer3: not found at this Tm | N.d. | 0.26 |
| mm3_intergenic_Mbd2|Dcc_chr18_70626987_F | Primer3: not found at this Tm | N.d. | 0.26 |
| mm3_intergenic_Mbd2|Dcc_chr18_70626987_R | Primer3: not found at this Tm | N.d. | 0.26 |
| mm4_intergenic_Pcdh20|Gm25886_chr14_89071185_F | Primer3: not found at this Tm | N.d. | 0.25 |
| mm4_intergenic_Pcdh20|Gm25886_chr14_89071185_R | Primer3: not found at this Tm | N.d. | 0.25 |
| mm4_intergenic_Btbd16|Gm5602_chr7_130829402_F | Primer3: not found at this Tm | N.d. | 0.25 |
| mm4_intergenic_Btbd16|Gm5602_chr7_130829402_R | Primer3: not found at this Tm | N.d. | 0.25 |
| mm3_intron_Phactr3_chr2_178265789_F | TCGTCGGCAGCGTCGGCACTGATACAGGCAATGC | 59.6 | 0.25 |
| mm3_intron_Phactr3_chr2_178265789_R | GTCTCGTGGGCTCGGTGAGAAAGGGCCCATGTCTG | 59.6 | 0.25 |
| mm4_intron_Brd3_chr2_27466265_F | Primer3: not found at this Tm | N.d. | 0.25 |
| mm4_intron_Brd3_chr2_27466265_R | Primer3: not found at this Tm | N.d. | 0.25 |
| mm4_intergenic_4930412C18Rik|Gdf6_chr4_9844050_F | Primer3: not found at this Tm | N.d. | 0.25 |
| mm4_intergenic_4930412C18Rik|Gdf6_chr4_9844050_R | Primer3: not found at this Tm | N.d. | 0.25 |
| mm4_intron_Epha3_chr16_63852766_F | Primer3: not found at this Tm | N.d. | 0.24 |
| mm4_intron_Epha3_chr16_63852766_R | Primer3: not found at this Tm | N.d. | 0.24 |
| mm4_intergenic_Sik1|Hsf2bp_chr17_31870295_F | TCGTCGGCAGCGTCGTGGAAGCCTCAGAAGGACC | 60.0 | 0.24 |
| mm4_intergenic_Sik1|Hsf2bp_chr17_31870295_R | GTCTCGTGGGCTCGGACGATACTGGCAAGGCAGAA | 59.3 | 0.24 |
| mm4_intergenic_Prss35|Snap91_chr9_86764797_F | Primer3: not found at this Tm | N.d. | 0.23 |
| mm4_intergenic_Prss35|Snap91_chr9_86764797_R | Primer3: not found at this Tm | N.d. | 0.23 |
| mm4_intergenic_Ggnbp1/Zbtb9|Ggnbp1_chr17_27006850_F | Primer3: not found at this Tm | N.d. | 0.23 |
| mm4_intergenic_Ggnbp1/Zbtb9|Ggnbp1_chr17_27006850_R | Primer3: not found at this Tm | N.d. | 0.23 |
| mm4_intron_Zfp617_chr8_71930612_F | Primer3: not found at this Tm | N.d. | 0.23 |
| mm4_intron_Zfp617_chr8_71930612_R | Primer3: not found at this Tm | N.d. | 0.23 |
| mm4_intergenic_Gm25853|Gm23180_chr16_54576109_F | Primer3: not found at this Tm | N.d. | 0.23 |
| mm4_intergenic_Gm25853|Gm23180_chr16_54576109_R | Primer3: not found at this Tm | N.d. | 0.23 |
| mm4_intergenic_Glrx3|Gm25798_chr7_137813973_F | Primer3: not found at this Tm | N.d. | 0.22 |
| mm4_intergenic_Glrx3|Gm25798_chr7_137813973_R | Primer3: not found at this Tm | N.d. | 0.22 |
| mm4_intergenic_Zfp951|Abcg3_chr5_104868924_F | Primer3: not found at this Tm | N.d. | 0.22 |
| mm4_intergenic_Zfp951|Abcg3_chr5_104868924_R | Primer3: not found at this Tm | N.d. | 0.22 |
| mm4_intergenic_Chst8|Pepd_chr7_34815194_F | Primer3: not found at this Tm | N.d. | 0.21 |
| mm4_intergenic_Chst8|Pepd_chr7_34815194_R | Primer3: not found at this Tm | N.d. | 0.21 |
| mm4_intergenic_Papss1|Gm26103_chr3_131721514_F | Primer3: not found at this Tm | N.d. | 0.21 |
| mm4_intergenic_Papss1|Gm26103_chr3_131721514_R | Primer3: not found at this Tm | N.d. | 0.21 |
| mm4_intron_Gm4791_chr9_46999946_F | Primer3: not found at this Tm | N.d. | 0.21 |
| mm4_intron_Gm4791_chr9_46999946_R | Primer3: not found at this Tm | N.d. | 0.21 |
| mm4_intron_Cadm2_chr16_66939085_F | Primer3: not found at this Tm | N.d. | 0.21 |
| mm4_intron_Cadm2_chr16_66939085_R | Primer3: not found at this Tm | N.d. | 0.21 |
| mm4_intergenic_Rasa1|Cox7c_chr13_85834127_F | Primer3: not found at this Tm | N.d. | 0.21 |
| mm4_intergenic_Rasa1|Cox7c_chr13_85834127_R | Primer3: not found at this Tm | N.d. | 0.21 |
| mm4_intergenic_Prl2a1|Prl2c1_chr13_27821031_F | Primer3: not found at this Tm | N.d. | 0.21 |
| mm4_intergenic_Prl2a1|Prl2c1_chr13_27821031_R | Primer3: not found at this Tm | N.d. | 0.21 |
| mm4_intergenic_Olfr419|Mptx1_chr1_174321692_F | Primer3: not found at this Tm | N.d. | 0.21 |
| mm4_intergenic_Olfr419|Mptx1_chr1_174321692_R | Primer3: not found at this Tm | N.d. | 0.21 |
| mm4_intergenic_Gm23892|Gm25382_chr10_16064558_F | Primer3: not found at this Tm | N.d. | 0.21 |
| mm4_intergenic_Gm23892|Gm25382_chr10_16064558_R | Primer3: not found at this Tm | N.d. | 0.21 |
| mm4_intergenic_4921515E04Rik|C030047K22Rik_chr15_18548305_F | Primer3: not found at this Tm | N.d. | 0.21 |
| mm4_intergenic_4921515E04Rik|C030047K22Rik_chr15_18548305_R | Primer3: not found at this Tm | N.d. | 0.21 |
| mm4_intergenic_Gm21392|Gm23727_chr6_78557977_F | Primer3: not found at this Tm | N.d. | 0.21 |
| mm4_intergenic_Gm21392|Gm23727_chr6_78557977_R | Primer3: not found at this Tm | N.d. | 0.21 |
| mm4_exon_Rexo1_chr10_80561455_F | TCGTCGGCAGCGTCAGCCGGTAGAACGTAGCATG | 59.8 | 0.21 |
| mm4_exon_Rexo1_chr10_80561455_R | GTCTCGTGGGCTCGGGGGTCCGAAAAGCGCGAG | 61.4 | 0.21 |
| mm4_intergenic_Cradd|Socs2_chr10_95357876_F | Primer3: not found at this Tm | N.d. | 0.20 |
| mm4_intergenic_Cradd|Socs2_chr10_95357876_R | Primer3: not found at this Tm | N.d. | 0.20 |
| mm4_intergenic_Gm7745|Lrfn5_chr12_61359278_F | Primer3: not found at this Tm | N.d. | 0.20 |
| mm4_intergenic_Gm7745|Lrfn5_chr12_61359278_R | Primer3: not found at this Tm | N.d. | 0.20 |
| mm4_intergenic_Fam122a|Pip5k1b_chr19_24477394_F | Primer3: not found at this Tm | N.d. | 0.19 |
| mm4_intergenic_Fam122a|Pip5k1b_chr19_24477394_R | Primer3: not found at this Tm | N.d. | 0.19 |
| mm4_intergenic_Gm11371|Gm11372_chr13_31079554_F | TCGTCGGCAGCGTCGCTGAGGGAGAAGCAGGAAG | 60.1 | 0.19 |
| mm4_intergenic_Gm11371|Gm11372_chr13_31079554_R | GTCTCGTGGGCTCGGTTCACAGCCCTCTCTTGCAG | 59.9 | 0.19 |
| mm4_intergenic_Gm14450|Gm26618_chrX_6018503_F | Primer3: not found at this Tm | N.d. | 0.19 |
| mm4_intergenic_Gm14450|Gm26618_chrX_6018503_R | Primer3: not found at this Tm | N.d. | 0.19 |
| mm4_intergenic_Tshz3|Zfp536_chr7_37434209_F | TCGTCGGCAGCGTCGCTACCACCTCTGGGTTCAC | 60.0 | 0.19 |
| mm4_intergenic_Tshz3|Zfp536_chr7_37434209_R | GTCTCGTGGGCTCGGGAGCACTCGGATGCTTCTGT | 60.1 | 0.19 |
| mm4_intron_Slc39a10_chr1_46853391_F | TCGTCGGCAGCGTCGAACACACGCGTCCCAAC | 59.3 | 0.19 |
| mm4_intron_Slc39a10_chr1_46853391_R | GTCTCGTGGGCTCGGACCCCGATTTGTTTACATTCCC | 58.9 | 0.19 |
| mm4_intron_Fxyd7_chr7_31046312_F | Primer3: not found at this Tm | N.d. | 0.18 |
| mm4_intron_Fxyd7_chr7_31046312_R | Primer3: not found at this Tm | N.d. | 0.18 |
| mm4_intergenic_Cradd|Socs2_chr10_95357819_F | Primer3: not found at this Tm | N.d. | 0.18 |
| mm4_intergenic_Cradd|Socs2_chr10_95357819_R | Primer3: not found at this Tm | N.d. | 0.18 |
| mm4_exon_Sema6c_chr3_95171813_F | TCGTCGGCAGCGTCGTCTCACTGGCTCTGACCTG | 59.7 | 0.18 |
| mm4_exon_Sema6c_chr3_95171813_R | GTCTCGTGGGCTCGGCCCTTACCCTGTGTGTGAGC | 60.3 | 0.18 |
| mm4_intergenic_Arhgap28|L3mbtl4_chr17_68234182_F | Primer3: not found at this Tm | N.d. | 0.18 |
| mm4_intergenic_Arhgap28|L3mbtl4_chr17_68234182_R | Primer3: not found at this Tm | N.d. | 0.18 |
| mm4_intergenic_Gm25942|Ptprz1_chr6_22854193_F | TCGTCGGCAGCGTCTACTGAGGGTGCAGGGAGG | 60.3 | 0.18 |
| mm4_intergenic_Gm25942|Ptprz1_chr6_22854193_R | GTCTCGTGGGCTCGGTGCACCCTCAGTACCCTCC | 60.6 | 0.18 |
| mm4_intergenic_Gm25942|Ptprz1_chr6_22854043_F | Primer3: not found at this Tm | N.d. | 0.18 |
| mm4_intergenic_Gm25942|Ptprz1_chr6_22854043_R | Primer3: not found at this Tm | N.d. | 0.18 |
| mm4_intergenic_Gm25942|Ptprz1_chr6_22854013_F | TCGTCGGCAGCGTCGGAGGGCACTCAGGGTGTA | 60.6 | 0.18 |
| mm4_intergenic_Gm25942|Ptprz1_chr6_22854013_R | GTCTCGTGGGCTCGGCTCCTCCCTGAACCCTCAGT | 60.2 | 0.18 |
| mm4_intergenic_Gm25942|Ptprz1_chr6_22853953_F | TCGTCGGCAGCGTCAGAGGGCACTGAGGGTGTAG | 60.6 | 0.18 |
| mm4_intergenic_Gm25942|Ptprz1_chr6_22853953_R | GTCTCGTGGGCTCGGCTGCCCTGAACCCTCAGTG | 60.0 | 0.18 |
| mm4_intron_Txn1_chr4_57956046_F | TCGTCGGCAGCGTCCACGAGTGCATCTCCCGTAC | 60.5 | 0.18 |
| mm4_intron_Txn1_chr4_57956046_R | GTCTCGTGGGCTCGGCGGTGCTGAAGAGGACACTC | 60.3 | 0.18 |
| mm4_exon_Barhl1_chr2_28909349_F | Primer3: not found at this Tm | N.d. | 0.18 |
| mm4_exon_Barhl1_chr2_28909349_R | Primer3: not found at this Tm | N.d. | 0.18 |
| mm4_intron_Ddx31_chr2_28888503_F | Primer3: not found at this Tm | N.d. | 0.18 |
| mm4_intron_Ddx31_chr2_28888503_R | Primer3: not found at this Tm | N.d. | 0.18 |
| mm4_intergenic_mmu-mir-6378|Gm25442_chr3_35045247_F | Primer3: not found at this Tm | N.d. | 0.18 |
| mm4_intergenic_mmu-mir-6378|Gm25442_chr3_35045247_R | Primer3: not found at this Tm | N.d. | 0.18 |
| mm4_exon_Tmem200c_chr17_68837369_F | TCGTCGGCAGCGTCCGGAGGACCTGACACTTCTT | 59.0 | 0.17 |
| mm4_exon_Tmem200c_chr17_68837369_R | GTCTCGTGGGCTCGGCCGGTGGGGACGAACCTG | 62.3 | 0.17 |
| mm4_intron_Dlgap4_chr2_156684937_F | TCGTCGGCAGCGTCGACGAGGTGTGTCAGGACTG | 60.0 | 0.17 |
| mm4_intron_Dlgap4_chr2_156684937_R | GTCTCGTGGGCTCGGGGCCATGAGACAAAGGGGAG | 60.3 | 0.17 |
| mm4_exon_Gorab_chr1_163396961_F | TCGTCGGCAGCGTCACCAGGTAGCTTTCCATCGC | 60.1 | 0.17 |
| mm4_exon_Gorab_chr1_163396961_R | GTCTCGTGGGCTCGGTCAAAAGCCACGCTCTCCTT | 59.8 | 0.17 |
| mm4_intergenic_Stxbp6|Gm24731_chr12_45099923_F | Primer3: not found at this Tm | N.d. | 0.17 |
| mm4_intergenic_Stxbp6|Gm24731_chr12_45099923_R | Primer3: not found at this Tm | N.d. | 0.17 |
| mm4_intergenic_Gm15348|Atp11a_chr8_12754181_F | Primer3: not found at this Tm | N.d. | 0.17 |
| mm4_intergenic_Gm15348|Atp11a_chr8_12754181_R | Primer3: not found at this Tm | N.d. | 0.17 |
| mm4_intergenic_Erbb4|Gm16076_chr1_68922703_F | Primer3: not found at this Tm | N.d. | 0.17 |
| mm4_intergenic_Erbb4|Gm16076_chr1_68922703_R | Primer3: not found at this Tm | N.d. | 0.17 |
| mm4_intergenic_Ostc|Rpl34_chr3_130720900_F | TCGTCGGCAGCGTCGCTCTAGAGGACAGGGATGC | 59.3 | 0.16 |
| mm4_intergenic_Ostc|Rpl34_chr3_130720900_R | GTCTCGTGGGCTCGGTGCGTTCCCTGTCTACACAC | 59.9 | 0.16 |
| mm4_exon_Irx6_chr8_92674611_F | TCGTCGGCAGCGTCTATCCGAGAGTGCGTGCATG | 60.2 | 0.16 |
| mm4_exon_Irx6_chr8_92674611_R | GTCTCGTGGGCTCGGGTGACGTCACGGTAATCCCC | 60.4 | 0.16 |
| mm4_intergenic_Zzz3/Ak5|Ak5_chr3_152468330_F | TCGTCGGCAGCGTCTGGCAGCAGGCAGGTAAAAT | 60.2 | 0.16 |
| mm4_intergenic_Zzz3/Ak5|Ak5_chr3_152468330_R | GTCTCGTGGGCTCGGGCTGAGGAGCCTGTGAAGAA | 59.6 | 0.16 |
| mm4_exon_Col26a1_chr5_136751668_F | Primer3: not found at this Tm | N.d. | 0.16 |
| mm4_exon_Col26a1_chr5_136751668_R | Primer3: not found at this Tm | N.d. | 0.16 |
| mm4_intron_Dock2_chr11_34535819_F | Primer3: not found at this Tm | N.d. | 0.16 |
| mm4_intron_Dock2_chr11_34535819_R | Primer3: not found at this Tm | N.d. | 0.16 |
| mm4_intergenic_Eif4g2|Galnt18_chr7_111293298_F | Primer3: not found at this Tm | N.d. | 0.16 |
| mm4_intergenic_Eif4g2|Galnt18_chr7_111293298_R | Primer3: not found at this Tm | N.d. | 0.16 |
| mm4_intergenic_Baz1a|2700097O09Rik_chr12_55032705_F | Primer3: not found at this Tm | N.d. | 0.16 |
| mm4_intergenic_Baz1a|2700097O09Rik_chr12_55032705_R | Primer3: not found at this Tm | N.d. | 0.16 |
| mm4_intron_Gpc5_chr14_115203105_F | Primer3: not found at this Tm | N.d. | 0.15 |
| mm4_intron_Gpc5_chr14_115203105_R | Primer3: not found at this Tm | N.d. | 0.15 |
| mm4_intergenic_Mir465|Gm14683_chrX_66857686_F | Primer3: not found at this Tm | N.d. | 0.15 |
| mm4_intergenic_Mir465|Gm14683_chrX_66857686_R | Primer3: not found at this Tm | N.d. | 0.15 |
| mm4_intergenic_Gm26072|Gabrg1_chr5_70727996_F | Primer3: not found at this Tm | N.d. | 0.15 |
| mm4_intergenic_Gm26072|Gabrg1_chr5_70727996_R | Primer3: not found at this Tm | N.d. | 0.15 |
| mm4_intergenic_Gm23605|Kctd8_chr5_68819549_F | Primer3: not found at this Tm | N.d. | 0.15 |
| mm4_intergenic_Gm23605|Kctd8_chr5_68819549_R | Primer3: not found at this Tm | N.d. | 0.15 |
| mm4_intergenic_Dkk2|Gm25307_chr3_132349473_F | Primer3: not found at this Tm | N.d. | 0.15 |
| mm4_intergenic_Dkk2|Gm25307_chr3_132349473_R | Primer3: not found at this Tm | N.d. | 0.15 |
| mm4_intergenic_Tcf7l2|Gm22271_chr19_56067368_F | Primer3: not found at this Tm | N.d. | 0.15 |
| mm4_intergenic_Tcf7l2|Gm22271_chr19_56067368_R | Primer3: not found at this Tm | N.d. | 0.15 |
| mm4_intergenic_Nubpl|Arhgap5_chr12_52504435_F | TCGTCGGCAGCGTCGAGGAGACCGGCGTTGTTAG | 60.4 | 0.14 |
| mm4_intergenic_Nubpl|Arhgap5_chr12_52504435_R | GTCTCGTGGGCTCGGCCAGCCCCTTCAACTGGTTA | 59.5 | 0.14 |
| mm4_intergenic_Efnb1|Gm14812_chrX_99227867_F | Primer3: not found at this Tm | N.d. | 0.14 |
| mm4_intergenic_Efnb1|Gm14812_chrX_99227867_R | Primer3: not found at this Tm | N.d. | 0.14 |
| mm4_intergenic_Zdhhc12|Zer1_chr2_30097237_F | TCGTCGGCAGCGTCACCTCTGACCGTGTACCTCA | 59.8 | 0.14 |
| mm4_intergenic_Zdhhc12|Zer1_chr2_30097237_R | GTCTCGTGGGCTCGGCCTGGGTCTGGGGAAATGTC | 60.0 | 0.14 |
| mm4_exon_Nup54_chr5_92434678_F | Primer3: not found at this Tm | N.d. | 0.14 |
| mm4_exon_Nup54_chr5_92434678_R | Primer3: not found at this Tm | N.d. | 0.14 |
| mm4_intergenic_Tshz2/Gm26883|Gm26883_chr2_169692820_F | Primer3: not found at this Tm | N.d. | 0.14 |
| mm4_intergenic_Tshz2/Gm26883|Gm26883_chr2_169692820_R | Primer3: not found at this Tm | N.d. | 0.14 |
| mm3_intergenic_Gm5614|Cdon_chr9_35308087_F | Primer3: not found at this Tm | N.d. | 0.14 |
| mm3_intergenic_Gm5614|Cdon_chr9_35308087_R | Primer3: not found at this Tm | N.d. | 0.14 |
| mm3_intron_Urgcp_chr11_5740796_F | TCGTCGGCAGCGTCACGCAAGCAAGTCTAAACGC | 59.7 | 0.14 |
| mm3_intron_Urgcp_chr11_5740796_R | GTCTCGTGGGCTCGGGAAACGGGTTCTGGAGAGGG | 60.0 | 0.14 |
| mm4_intron_Phf21a_chr2_92185330_F | Primer3: not found at this Tm | N.d. | 0.14 |
| mm4_intron_Phf21a_chr2_92185330_R | Primer3: not found at this Tm | N.d. | 0.14 |
| mm4_intergenic_Aldh1a2|Polr2m/Gcom1_chr9_71416903_F | Primer3: not found at this Tm | N.d. | 0.14 |
| mm4_intergenic_Aldh1a2|Polr2m/Gcom1_chr9_71416903_R | Primer3: not found at this Tm | N.d. | 0.14 |
| mm3_intron_1700112E06Rik_chr14_22027357_F | Primer3: not found at this Tm | N.d. | 0.14 |
| mm3_intron_1700112E06Rik_chr14_22027357_R | Primer3: not found at this Tm | N.d. | 0.14 |
| mm4_intergenic_Gm5335|A730056A06Rik_chr7_73099427_F | TCGTCGGCAGCGTCGGGGCCAAAGCTATGGAAAC | 59.1 | 0.14 |
| mm4_intergenic_Gm5335|A730056A06Rik_chr7_73099427_R | GTCTCGTGGGCTCGGTTGGGCAAAGTCAGAGCACA | 60.1 | 0.14 |
| mm4_intron_Ttc6_chr12_57685149_F | Primer3: not found at this Tm | N.d. | 0.13 |
| mm4_intron_Ttc6_chr12_57685149_R | Primer3: not found at this Tm | N.d. | 0.13 |
| mm4_intergenic_2310007B03Rik|E030010N08Rik_chr1_93183142_F | TCGTCGGCAGCGTCCTGACATCTGGAATGCCCCA | 59.7 | 0.13 |
| mm4_intergenic_2310007B03Rik|E030010N08Rik_chr1_93183142_R | GTCTCGTGGGCTCGGGGCCTGGGGATACTATGGGA | 60.1 | 0.13 |
| mm4_intergenic_Lce3f|Crct1_chr3_93000054_F | TCGTCGGCAGCGTCAATTTGGGAGCTGGATGGGG | 60.0 | 0.13 |
| mm4_intergenic_Lce3f|Crct1_chr3_93000054_R | GTCTCGTGGGCTCGGCTGCCTCCTGAGACAACCTG | 60.0 | 0.13 |
| mm4_intergenic_2310002F09Rik|Klk13_chr7_43710303_F | Primer3: not found at this Tm | N.d. | 0.12 |
| mm4_intergenic_2310002F09Rik|Klk13_chr7_43710303_R | Primer3: not found at this Tm | N.d. | 0.12 |
| mm4_intergenic_Tbc1d1|Gm25306_chr5_64504052_F | Primer3: not found at this Tm | N.d. | 0.12 |
| mm4_intergenic_Tbc1d1|Gm25306_chr5_64504052_R | Primer3: not found at this Tm | N.d. | 0.12 |
| mm4_intergenic_Hs3st4/Gm27040|Gm25759_chr7_124125634_F | TCGTCGGCAGCGTCAGGGAAAGAGAATAGCATGCTCT | 59.2 | 0.12 |
| mm4_intergenic_Hs3st4/Gm27040|Gm25759_chr7_124125634_R | GTCTCGTGGGCTCGGACATGAGCAGAGGGCCAAAA | 59.8 | 0.12 |
| mm4_exon_Inhbe_chr10_127349767_F | TCGTCGGCAGCGTCACGAGTTCAGCACCCCTTTT | 59.8 | 0.12 |
| mm4_exon_Inhbe_chr10_127349767_R | GTCTCGTGGGCTCGGCAGGCTAAGAACAGGGTGCA | 59.9 | 0.12 |
| mm4_intron_Lurap1l_chr4_80911660_F | TCGTCGGCAGCGTCAGATGGTGAGTGTGATGCGT | 59.3 | 0.11 |
| mm4_intron_Lurap1l_chr4_80911660_R | GTCTCGTGGGCTCGGACACCTCCTCCCAGCTTCTC | 60.9 | 0.11 |
| mm4_exon_Papln_chr12_83777066_F | TCGTCGGCAGCGTCGCTCAGTTACATGCGGGACT | 60.1 | 0.11 |
| mm4_exon_Papln_chr12_83777066_R | GTCTCGTGGGCTCGGCAGGCCTCTTGTACACAGGG | 60.0 | 0.11 |
| mm4_intron_Eps8l1_chr7_4461943_F | Primer3: not found at this Tm | N.d. | 0.11 |
| mm4_intron_Eps8l1_chr7_4461943_R | Primer3: not found at this Tm | N.d. | 0.11 |
| mm4_exon_Bcl9_chr3_97208718_F | Primer3: not found at this Tm | N.d. | 0.11 |
| mm4_exon_Bcl9_chr3_97208718_R | Primer3: not found at this Tm | N.d. | 0.11 |
| mm3_intron_Ptk2b_chr14_66216415_F | Primer3: not found at this Tm | N.d. | 0.11 |
| mm3_intron_Ptk2b_chr14_66216415_R | Primer3: not found at this Tm | N.d. | 0.11 |
| mm4_intron_Casq1_chr1_172218274_F | Primer3: not found at this Tm | N.d. | 0.11 |
| mm4_intron_Casq1_chr1_172218274_R | Primer3: not found at this Tm | N.d. | 0.11 |
| mm4_intron_Dnah12_chr14_26785514_F | Primer3: not found at this Tm | N.d. | 0.11 |
| mm4_intron_Dnah12_chr14_26785514_R | Primer3: not found at this Tm | N.d. | 0.11 |
| mm4_intron_Tmem117_chr15_94767087_F | Primer3: not found at this Tm | N.d. | 0.10 |
| mm4_intron_Tmem117_chr15_94767087_R | Primer3: not found at this Tm | N.d. | 0.10 |
| mm4_exon_Exosc4/Oplah_chr15_76327672_F | TCGTCGGCAGCGTCGATGGCTCGGCTTACATCGA | 59.9 | 0.10 |
| mm4_exon_Exosc4/Oplah_chr15_76327672_R | GTCTCGTGGGCTCGGGGTCTCCTCCCTTGATGTGC | 60.1 | 0.10 |
| mm4_intron_Plcxd1_chr5_110100736_F | Primer3: not found at this Tm | N.d. | 0.10 |
| mm4_intron_Plcxd1_chr5_110100736_R | Primer3: not found at this Tm | N.d. | 0.10 |
| mm4_intergenic_Cmah|Gm22013_chr13_24477467_F | Primer3: not found at this Tm | N.d. | 0.10 |
| mm4_intergenic_Cmah|Gm22013_chr13_24477467_R | Primer3: not found at this Tm | N.d. | 0.10 |
| mm4_exon_Krba1_chr6_48419070_F | Primer3: not found at this Tm | N.d. | 0.10 |
| mm4_exon_Krba1_chr6_48419070_R | Primer3: not found at this Tm | N.d. | 0.10 |
| mm4_intron_Scn8a_chr15_100954489_F | TCGTCGGCAGCGTCTTGCAAGAGAGGGCCTAACC | 59.6 | 0.10 |
| mm4_intron_Scn8a_chr15_100954489_R | GTCTCGTGGGCTCGGTGAGGATGGAGGACAGAGGG | 60.0 | 0.10 |
| mm4_intron_Atp6v1h_chr1_5083513_F | TCGTCGGCAGCGTCCTTTGGTGCCAGCCTTGC | 59.6 | 0.10 |
| mm4_intron_Atp6v1h_chr1_5083513_R | GTCTCGTGGGCTCGGCGTTGCCGAAGTGCTTAGTC | 59.5 | 0.10 |
| mm4_intergenic_F830001A07Rik|Rora_chr9_68896217_F | Primer3: not found at this Tm | N.d. | 0.09 |
| mm4_intergenic_F830001A07Rik|Rora_chr9_68896217_R | Primer3: not found at this Tm | N.d. | 0.09 |
| mm4_exon_Plod1_chr4_147923730_F | Primer3: not found at this Tm | N.d. | 0.09 |
| mm4_exon_Plod1_chr4_147923730_R | Primer3: not found at this Tm | N.d. | 0.09 |
| mm4_exon_Fdx1_chr9_51963327_F | Primer3: not found at this Tm | N.d. | 0.09 |
| mm4_exon_Fdx1_chr9_51963327_R | Primer3: not found at this Tm | N.d. | 0.09 |
| mm4_intron_Exd2_chr12_80487860_F | Primer3: not found at this Tm | N.d. | 0.09 |
| mm4_intron_Exd2_chr12_80487860_R | Primer3: not found at this Tm | N.d. | 0.09 |
| mm4_intergenic_Ackr4/Acad11|Dnajc13_chr9_104129314_F | Primer3: not found at this Tm | N.d. | 0.09 |
| mm4_intergenic_Ackr4/Acad11|Dnajc13_chr9_104129314_R | Primer3: not found at this Tm | N.d. | 0.09 |
| mm4_intergenic_Gm25913|Cog5_chr12_31864028_F | TCGTCGGCAGCGTCGGGAGACGAGTTACCCTGGA | 60.3 | 0.09 |
| mm4_intergenic_Gm25913|Cog5_chr12_31864028_R | GTCTCGTGGGCTCGGTTGCTTCCACCCCTGTCATC | 59.9 | 0.09 |
| mm4_intergenic_3930402G23Rik|Irs2_chr8_10961536_F | TCGTCGGCAGCGTCGCTGGTAGGCCTCCAAACAT | 60.0 | 0.09 |
| mm4_intergenic_3930402G23Rik|Irs2_chr8_10961536_R | GTCTCGTGGGCTCGGCCCACTCCTGCATTGGTCAT | 60.0 | 0.09 |
| mm4_intron_Stk32c_chr7_139141604_F | Primer3: not found at this Tm | N.d. | 0.08 |
| mm4_intron_Stk32c_chr7_139141604_R | Primer3: not found at this Tm | N.d. | 0.08 |
| mm4_exon_Col2a1_chr15_97996655_F | Primer3: not found at this Tm | N.d. | 0.08 |
| mm4_exon_Col2a1_chr15_97996655_R | Primer3: not found at this Tm | N.d. | 0.08 |
| mm4_exon_Fut2_chr7_45649385_F | TCGTCGGCAGCGTCGGACAGAGTAGGCAAAGTCCC | 60.0 | 0.08 |
| mm4_exon_Fut2_chr7_45649385_R | GTCTCGTGGGCTCGGGGAGAACGCTGGGATTGGTT | 60.3 | 0.08 |
| mm4_intergenic_4932435O22Rik|Gm11689_chr11_114537024_F | Primer3: not found at this Tm | N.d. | 0.08 |
| mm4_intergenic_4932435O22Rik|Gm11689_chr11_114537024_R | Primer3: not found at this Tm | N.d. | 0.08 |
| mm4_intergenic_Sertad2|Aftph_chr11_20673800_F | Primer3: not found at this Tm | N.d. | 0.08 |
| mm4_intergenic_Sertad2|Aftph_chr11_20673800_R | Primer3: not found at this Tm | N.d. | 0.08 |
| mm4_intron_Bnc2_chr4_84393516_F | TCGTCGGCAGCGTCAGAACCTGAGTGAGCAAAAGGT | 59.8 | 0.08 |
| mm4_intron_Bnc2_chr4_84393516_R | GTCTCGTGGGCTCGGTCCTTGTATCTCCTGTCTGGGT | 59.9 | 0.08 |
| mm4_intergenic_Nefm|Gm22319_chr14_68124931_F | TCGTCGGCAGCGTCGCAGCCCCTTTATAGCGGAG | 60.6 | 0.08 |
| mm4_intergenic_Nefm|Gm22319_chr14_68124931_R | GTCTCGTGGGCTCGGCGCAAGGCTTGTCTCCCC | 60.7 | 0.08 |
| mm4_intron_Zfp521_chr18_13942975_F | TCGTCGGCAGCGTCGTGGCCTCCATCACAAAGGA | 59.9 | 0.08 |
| mm4_intron_Zfp521_chr18_13942975_R | GTCTCGTGGGCTCGGACAGTTGTGCCTCTGTTCCA | 59.4 | 0.08 |
| mm3_intergenic_Gm7361|4930584F24Rik_chr5_26412281_F | TCGTCGGCAGCGTCGGAGACCAACTTGGGGAAGG | 59.9 | 0.07 |
| mm3_intergenic_Gm7361|4930584F24Rik_chr5_26412281_R | GTCTCGTGGGCTCGGATCATTATACATTGTCTTCACCCAC | 57.1 | 0.07 |
| mm4_intron_Phactr2_chr10_13470304_F | Primer3: not found at this Tm | N.d. | 0.07 |
| mm4_intron_Phactr2_chr10_13470304_R | Primer3: not found at this Tm | N.d. | 0.07 |
| mm4_exon_Phtf2_chr5_20882114_F | TCGTCGGCAGCGTCCTGGAGCCCAAAGAGCTACA | 59.3 | 0.07 |
| mm4_exon_Phtf2_chr5_20882114_R | GTCTCGTGGGCTCGGGACTCCGTGGTCATGCGAG | 60.5 | 0.07 |
| mm4_intron_Hmcn2_chr2_31428900_F | TCGTCGGCAGCGTCGTCACCTCTCATGCCACCTC | 60.1 | 0.07 |
| mm4_intron_Hmcn2_chr2_31428900_R | GTCTCGTGGGCTCGGGACAAGTCCCTGCTGAGGTG | 60.3 | 0.07 |
| mm4_intergenic_Gm25180|Agap1_chr1_89580155_F | Primer3: not found at this Tm | N.d. | 0.07 |
| mm4_intergenic_Gm25180|Agap1_chr1_89580155_R | Primer3: not found at this Tm | N.d. | 0.07 |
| mm4_intergenic_Irf2bp1|Foxa3_chr7_19011431_F | TCGTCGGCAGCGTCGAGGTCCAAGGCACTGAGTC | 60.0 | 0.07 |
| mm4_intergenic_Irf2bp1|Foxa3_chr7_19011431_R | GTCTCGTGGGCTCGGGAGGCATGGAGCTGGTTTGA | 60.3 | 0.07 |
| mm4_intron_Opcml_chr9_28882551_F | TCGTCGGCAGCGTCGTGTGTCTGGCCTCTGGATG | 60.3 | 0.07 |
| mm4_intron_Opcml_chr9_28882551_R | GTCTCGTGGGCTCGGGGACTGCAAATACACAAGGCA | 59.1 | 0.07 |
| mm4_intron_Cdh23_chr10_60575233_F | TCGTCGGCAGCGTCTTAGGGCTGAGGACGCAAAG | 60.0 | 0.06 |
| mm4_intron_Cdh23_chr10_60575233_R | GTCTCGTGGGCTCGGCAGAGCCTGGCTATTGCACT | 60.1 | 0.06 |
| mm4_intron_Rcvrn_chr11_67702736_F | TCGTCGGCAGCGTCGAAAAGCCAGAAACCTGCCC | 59.6 | 0.06 |
| mm4_intron_Rcvrn_chr11_67702736_R | GTCTCGTGGGCTCGGGATACCCAACCTCCACACCC | 59.7 | 0.06 |
| mm4_intron_Chst11_chr10_83076364_F | TCGTCGGCAGCGTCGGCTCCACACAAAGAAGATGC | 59.7 | 0.06 |
| mm4_intron_Chst11_chr10_83076364_R | GTCTCGTGGGCTCGGCGTGGCCCTCATCCTTCAAA | 60.3 | 0.06 |
| mm4_intergenic_Crip2|Crip1_chr12_113148118_F | TCGTCGGCAGCGTCAAGGCCAGATCTTGTGCCAG | 60.3 | 0.06 |
| mm4_intergenic_Crip2|Crip1_chr12_113148118_R | GTCTCGTGGGCTCGGCCCAGGGCCTATTTTCAGCA | 60.0 | 0.06 |
| mm3_intergenic_Gm24202|Gm8100_chr8_27770487_F | TCGTCGGCAGCGTCACCATCAGTGAGGCAAAGAGA | 59.0 | 0.06 |
| mm3_intergenic_Gm24202|Gm8100_chr8_27770487_R | GTCTCGTGGGCTCGGGCAGATGCTCAGAAACGATTATTCA | 59.9 | 0.06 |
| mm4_exon_Ankrd34b_chr13_92438919_F | TCGTCGGCAGCGTCTGAGACGGACCTGACACTCT | 59.8 | 0.06 |
| mm4_exon_Ankrd34b_chr13_92438919_R | GTCTCGTGGGCTCGGCTGGAGCCTGGGATAGCTTG | 59.8 | 0.06 |
| mm4_exon_Arid4b_chr13_14064300_F | Primer3: not found at this Tm | N.d. | 0.06 |
| mm4_exon_Arid4b_chr13_14064300_R | Primer3: not found at this Tm | N.d. | 0.06 |
| mm4_intergenic_Tas2r114|Gm4736_chr6_131905875_F | Primer3: not found at this Tm | N.d. | 0.06 |
| mm4_intergenic_Tas2r114|Gm4736_chr6_131905875_R | Primer3: not found at this Tm | N.d. | 0.06 |
| mm4_intergenic_Kcng4|Wfdc1_chr8_119666057_F | Primer3: not found at this Tm | N.d. | 0.06 |
| mm4_intergenic_Kcng4|Wfdc1_chr8_119666057_R | Primer3: not found at this Tm | N.d. | 0.06 |
| mm4_intergenic_Il10ra|1700003G13Rik_chr9_45298108_F | TCGTCGGCAGCGTCACAATACCCACTGCAGCTCC | 60.0 | 0.05 |
| mm4_intergenic_Il10ra|1700003G13Rik_chr9_45298108_R | GTCTCGTGGGCTCGGGGAACCTGGCACCTGGAAAT | 60.2 | 0.05 |
| mm4_intron_Rnaseh2b_chr14_62332415_F | TCGTCGGCAGCGTCGGGAAAACTCCAAACCCGGA | 60.1 | 0.05 |
| mm4_intron_Rnaseh2b_chr14_62332415_R | GTCTCGTGGGCTCGGTCCAGTAACTCCCAGGGGAC | 60.2 | 0.05 |
| mm3_intron_Aox2_chr1_58335135_F | Primer3: not found at this Tm | N.d. | 0.05 |
| mm3_intron_Aox2_chr1_58335135_R | Primer3: not found at this Tm | N.d. | 0.05 |
| mm4_intron_Bzw1_chr1_58393293_F | Primer3: not found at this Tm | N.d. | 0.05 |
| mm4_intron_Bzw1_chr1_58393293_R | Primer3: not found at this Tm | N.d. | 0.05 |
| mm4_intron_Slc25a1_chr16_17927908_F | TCGTCGGCAGCGTCGCAGACGAGTGGACTTAGGG | 59.8 | 0.05 |
| mm4_intron_Slc25a1_chr16_17927908_R | GTCTCGTGGGCTCGGCTCGGAACCCCAACTCAGAG | 59.7 | 0.05 |
| mm4_intergenic_Gm26119|Fzd8_chr18_9212628_F | TCGTCGGCAGCGTCAAGTGTCTGAGCGTGCAGAA | 59.8 | 0.05 |
| mm4_intergenic_Gm26119|Fzd8_chr18_9212628_R | GTCTCGTGGGCTCGGGCCACAATTCCACAGGGTCT | 60.2 | 0.05 |
| mm4_intron_Unc13a_chr8_71638625_F | TCGTCGGCAGCGTCCCTCGCCTGACCCATAGAGA | 60.4 | 0.04 |
| mm4_intron_Unc13a_chr8_71638625_R | GTCTCGTGGGCTCGGATTCCATGCCAGGGCTTTCT | 59.6 | 0.04 |
| mm4_intergenic_Tshr|Gtf2a1_chr12_91548839_F | Primer3: not found at this Tm | N.d. | 0.04 |
| mm4_intergenic_Tshr|Gtf2a1_chr12_91548839_R | Primer3: not found at this Tm | N.d. | 0.04 |
| mm4_intron_Speg_chr1_75405192_F | TCGTCGGCAGCGTCTCAGGTGCTAGGGCTACTGT | 59.9 | 0.04 |
| mm4_intron_Speg_chr1_75405192_R | GTCTCGTGGGCTCGGGCCCATACTATCTCCTGGCC | 59.3 | 0.04 |
| mm4_exon_Foxa3_chr7_19014985_F | TCGTCGGCAGCGTCCCAAGCTTGGGAAGGTGGG | 60.6 | 0.04 |
| mm4_exon_Foxa3_chr7_19014985_R | GTCTCGTGGGCTCGGCACTCAGCTCTCCCTACCCT | 60.0 | 0.04 |
| mm4_intron_Gga1_chr15_78889123_F | TCGTCGGCAGCGTCACCTGTACAAGCAGCTGGTC | 59.9 | 0.04 |
| mm4_intron_Gga1_chr15_78889123_R | GTCTCGTGGGCTCGGCGTGGTCACACTGAAGGTCA | 59.8 | 0.04 |
| mm4_intron_Camsap3_chr8_3587977_F | Primer3: not found at this Tm | N.d. | 0.04 |
| mm4_intron_Camsap3_chr8_3587977_R | Primer3: not found at this Tm | N.d. | 0.04 |
| mm4_intron_Acat1_chr9_53600333_F | Primer3: not found at this Tm | N.d. | 0.04 |
| mm4_intron_Acat1_chr9_53600333_R | Primer3: not found at this Tm | N.d. | 0.04 |
| mm4_intergenic_Irf8|Gm26878_chr8_120796295_F | Primer3: not found at this Tm | N.d. | 0.04 |
| mm4_intergenic_Irf8|Gm26878_chr8_120796295_R | Primer3: not found at this Tm | N.d. | 0.04 |
| mm4_intergenic_3830408C21Rik|Apoo-ps_chr13_107381431_F | Primer3: not found at this Tm | N.d. | 0.04 |
| mm4_intergenic_3830408C21Rik|Apoo-ps_chr13_107381431_R | Primer3: not found at this Tm | N.d. | 0.04 |
| mm4_intron_P2ry6_chr7_100950894_F | Primer3: not found at this Tm | N.d. | 0.04 |
| mm4_intron_P2ry6_chr7_100950894_R | Primer3: not found at this Tm | N.d. | 0.04 |
| mm3_intron_Trpm5_chr7_143072828_F | TCGTCGGCAGCGTCGGAGAGAGCCAAGGGAGGTA | 60.0 | 0.04 |
| mm3_intron_Trpm5_chr7_143072828_R | GTCTCGTGGGCTCGGGGGCAATCACATGGGAGGAA | 60.0 | 0.04 |
| mm4_intron_Gm9428_chrX_5277921_F | TCGTCGGCAGCGTCTAGTGTCCTGAGCTTCCCTG | 58.4 | 0.04 |
| mm4_intron_Gm9428_chrX_5277921_R | GTCTCGTGGGCTCGGAGCCAGACTGAGGTTCTGGA | 60.1 | 0.04 |
| mm4_intergenic_Spin2-ps5|Gm21699_chrX_34297091_F | TCGTCGGCAGCGTCAGCCAGACTGAGGTTCTGGA | 60.1 | 0.04 |
| mm4_intergenic_Spin2-ps5|Gm21699_chrX_34297091_R | GTCTCGTGGGCTCGGTAGTGTCCTGAGCTTCCCTG | 58.4 | 0.04 |
| mm4_intergenic_Gmcl1l|Gm5926_chrX_32601493_F | Primer3: not found at this Tm | N.d. | 0.04 |
| mm4_intergenic_Gmcl1l|Gm5926_chrX_32601493_R | Primer3: not found at this Tm | N.d. | 0.04 |
| mm4_intergenic_Gm6019|Gm9427_chrX_4410474_F | Primer3: not found at this Tm | N.d. | 0.04 |
| mm4_intergenic_Gm6019|Gm9427_chrX_4410474_R | Primer3: not found at this Tm | N.d. | 0.04 |
| mm4_intergenic_Gm4726|Gm3757_chrX_4840170_F | TCGTCGGCAGCGTCAGTGCCTCTCCTCCCTTCAT | 59.9 | 0.04 |
| mm4_intergenic_Gm4726|Gm3757_chrX_4840170_R | GTCTCGTGGGCTCGGAGCCAGACTGAGGTTCTGGA | 60.1 | 0.04 |
| mm4_intergenic_Gm4725|Gm9498_chrX_4631253_F | TCGTCGGCAGCGTCTAGTGTCCTGAGCTTCCCTG | 58.4 | 0.04 |
| mm4_intergenic_Gm4725|Gm9498_chrX_4631253_R | GTCTCGTGGGCTCGGAGCCAGACTGAGGTTCTGGA | 60.1 | 0.04 |
| mm4_intergenic_Gm2933|Gm2964_chrX_33830340_F | TCGTCGGCAGCGTCAGCCAGACTGAGGTTCTGGA | 60.1 | 0.04 |
| mm4_intergenic_Gm2933|Gm2964_chrX_33830340_R | GTCTCGTGGGCTCGGAGTGCCTCTCCTCCCTTCAT | 59.9 | 0.04 |
| mm4_intergenic_Gm2825|Spin2-ps6_chrX_33013780_F | TCGTCGGCAGCGTCAGTGCCTCTCCTCCCTTCAT | 59.9 | 0.04 |
| mm4_intergenic_Gm2825|Spin2-ps6_chrX_33013780_R | GTCTCGTGGGCTCGGAGCCAGACTGAGGTTCTGGA | 60.1 | 0.04 |
| mm4_intergenic_Gm2223|Gm2231_chrX_33531098_F | TCGTCGGCAGCGTCAGCCAGACTGAGGTTCTGGA | 60.1 | 0.04 |
| mm4_intergenic_Gm2223|Gm2231_chrX_33531098_R | GTCTCGTGGGCTCGGAGTGCCTCTCCTCCCTTCAT | 59.9 | 0.04 |
| mm4_intergenic_Gm2182|Gm2854_chrX_33353410_F | TCGTCGGCAGCGTCTGCCTCTCCTCCCTCCATTT | 60.2 | 0.04 |
| mm4_intergenic_Gm2182|Gm2854_chrX_33353410_R | GTCTCGTGGGCTCGGAGCCAGACTGAGGTTCTGGA | 60.1 | 0.04 |
| mm4_intergenic_Gm21699|Gm2288_chrX_34567201_F | Primer3: not found at this Tm | N.d. | 0.04 |
| mm4_intergenic_Gm21699|Gm2288_chrX_34567201_R | Primer3: not found at this Tm | N.d. | 0.04 |
| mm4_intergenic_Gm21447|Spin2f_chrX_31211327_F | Primer3: not found at this Tm | N.d. | 0.04 |
| mm4_intergenic_Gm21447|Spin2f_chrX_31211327_R | Primer3: not found at this Tm | N.d. | 0.04 |
| mm4_intergenic_Gm14350|Gm14349_chrX_4077588_F | TCGTCGGCAGCGTCAGTGCCTCTCCTCCCTTCAT | 59.9 | 0.04 |
| mm4_intergenic_Gm14350|Gm14349_chrX_4077588_R | GTCTCGTGGGCTCGGAGCCAGACTGAGGTTCTGGA | 60.1 | 0.04 |
| mm4_intergenic_Gm14332|Gm14334_chrX_3327525_F | TCGTCGGCAGCGTCAGCCAGACTGAGGTTCTGGA | 60.1 | 0.04 |
| mm4_intergenic_Gm14332|Gm14334_chrX_3327525_R | GTCTCGTGGGCTCGGTAGTGTCCTGAGCTTCCCTG | 58.4 | 0.04 |
| mm4_intron_Mnd1_chr3_84138123_F | Primer3: not found at this Tm | N.d. | 0.04 |
| mm4_intron_Mnd1_chr3_84138123_R | Primer3: not found at this Tm | N.d. | 0.04 |
| mm4_intergenic_Gm25942|Ptprz1_chr6_22854223_F | TCGTCGGCAGCGTCTGAGGGTTCAGGGAGGAGC | 60.6 | 0.03 |
| mm4_intergenic_Gm25942|Ptprz1_chr6_22854223_R | GTCTCGTGGGCTCGGTCCTTCCAAAAGCACTCGGT | 59.5 | 0.03 |
| mm4_intergenic_Gm25942|Ptprz1_chr6_22854133_F | TCGTCGGCAGCGTCCGGAAGGCACTGAGGGTTC | 60.3 | 0.03 |
| mm4_intergenic_Gm25942|Ptprz1_chr6_22854133_R | GTCTCGTGGGCTCGGCTCCTCCCTGAACCCTCAGT | 60.2 | 0.03 |
| mm4_intergenic_Gm25942|Ptprz1_chr6_22853803_F | Primer3: not found at this Tm | N.d. | 0.03 |
| mm4_intergenic_Gm25942|Ptprz1_chr6_22853803_R | Primer3: not found at this Tm | N.d. | 0.03 |
| mm4_intergenic_Gm25942|Ptprz1_chr6_22854163_F | Primer3: not found at this Tm | N.d. | 0.03 |
| mm4_intergenic_Gm25942|Ptprz1_chr6_22854163_R | Primer3: not found at this Tm | N.d. | 0.03 |
| mm4_intergenic_Gm25942|Ptprz1_chr6_22854073_F | Primer3: not found at this Tm | N.d. | 0.03 |
| mm4_intergenic_Gm25942|Ptprz1_chr6_22854073_R | Primer3: not found at this Tm | N.d. | 0.03 |
| mm3_intergenic_Gm14275|Gm14273_chr2_172297083_F | TCGTCGGCAGCGTCTACTTTGGATTGCGTGGCCT | 59.9 | 0.03 |
| mm3_intergenic_Gm14275|Gm14273_chr2_172297083_R | GTCTCGTGGGCTCGGGGGGTGGTCCTGAGCAATAG | 59.8 | 0.03 |
| mm4_intron_Grhl1_chr12_24572638_F | Primer3: not found at this Tm | N.d. | 0.03 |
| mm4_intron_Grhl1_chr12_24572638_R | Primer3: not found at this Tm | N.d. | 0.03 |
| mm4_intergenic_Gata2|Dnajb8/1700031F10Rik_chr6_88207947_F | TCGTCGGCAGCGTCTCTCTGATGCCCTGGTACCA | 59.9 | 0.03 |
| mm4_intergenic_Gata2|Dnajb8/1700031F10Rik_chr6_88207947_R | GTCTCGTGGGCTCGGAGCAAGTGGTCAGGAGTGTG | 59.8 | 0.03 |
| mm4_intron_Vmn2r-ps134_chr17_23442110_F | Primer3: not found at this Tm | N.d. | 0.03 |
| mm4_intron_Vmn2r-ps134_chr17_23442110_R | Primer3: not found at this Tm | N.d. | 0.03 |
| mm4_intergenic_Gm22227|Zfp703_chr8_26630283_F | Primer3: not found at this Tm | N.d. | 0.03 |
| mm4_intergenic_Gm22227|Zfp703_chr8_26630283_R | Primer3: not found at this Tm | N.d. | 0.03 |
| mm4_intergenic_Tifa|Ap1ar_chr3_127806838_F | Primer3: not found at this Tm | N.d. | 0.03 |
| mm4_intergenic_Tifa|Ap1ar_chr3_127806838_R | Primer3: not found at this Tm | N.d. | 0.03 |
| mm3_intergenic_Gm25718|4930594M17Rik_chr18_81095855_F | Primer3: not found at this Tm | N.d. | 0.03 |
| mm3_intergenic_Gm25718|4930594M17Rik_chr18_81095855_R | Primer3: not found at this Tm | N.d. | 0.03 |
| mm4_intron_Atp8a1_chr5_67671237_F | TCGTCGGCAGCGTCGCCACATCACATCCAGGCTA | 59.8 | 0.03 |
| mm4_intron_Atp8a1_chr5_67671237_R | GTCTCGTGGGCTCGGGCACACACCTGTCTCCTTCA | 59.8 | 0.03 |
| mm4_intron_Begain_chr12_109052609_F | TCGTCGGCAGCGTCATCGGCGCAAACTTCGCTA | 60.4 | 0.03 |
| mm4_intron_Begain_chr12_109052609_R | GTCTCGTGGGCTCGGGTCATCCCCGACCGGTCC | 61.8 | 0.03 |
| mm4_intron_Cercam_chr2_29879582_F | Primer3: not found at this Tm | N.d. | 0.03 |
| mm4_intron_Cercam_chr2_29879582_R | Primer3: not found at this Tm | N.d. | 0.03 |
| mm4_intergenic_Gm13018|Prdm2_chr4_142594035_F | TCGTCGGCAGCGTCCCCCTGTACGTGTTAACCCC | 60.0 | 0.02 |
| mm4_intergenic_Gm13018|Prdm2_chr4_142594035_R | GTCTCGTGGGCTCGGCTCTCACTGCCACGTCACTT | 59.9 | 0.02 |
| mm4_intron_Rbms2_chr10_128149559_F | TCGTCGGCAGCGTCTAAGCTGGAGAATGCCCTGG | 59.4 | 0.02 |
| mm4_intron_Rbms2_chr10_128149559_R | GTCTCGTGGGCTCGGCTGGCCGACAGTCATTCCTT | 60.0 | 0.02 |
| mm4_intergenic_Npl|Rgs8_chr1_153641884_F | Primer3: not found at this Tm | N.d. | 0.02 |
| mm4_intergenic_Npl|Rgs8_chr1_153641884_R | Primer3: not found at this Tm | N.d. | 0.02 |
| mm4_intergenic_Gm24863|Gm24635_chr13_79536321_F | Primer3: not found at this Tm | N.d. | 0.02 |
| mm4_intergenic_Gm24863|Gm24635_chr13_79536321_R | Primer3: not found at this Tm | N.d. | 0.02 |
| mm4_intergenic_Fst|Gm25950_chr13_114460496_F | TCGTCGGCAGCGTCCCGCCGCTTTTCGCTTTATA | 59.3 | 0.02 |
| mm4_intergenic_Fst|Gm25950_chr13_114460496_R | GTCTCGTGGGCTCGGCCCCAGAGCCGTCTAAAGTG | 60.1 | 0.02 |
| mm4_intergenic_Mcm9|Asf1a_chr10_53566680_F | TCGTCGGCAGCGTCAGAGGCAAGTCATCCCTAGGA | 59.7 | 0.02 |
| mm4_intergenic_Mcm9|Asf1a_chr10_53566680_R | GTCTCGTGGGCTCGGTCCTCAGGTTACTTCTCTGGGA | 59.6 | 0.02 |
| mm4_intergenic_Gm14083|Gm14082_chr2_143134703_F | Primer3: not found at this Tm | N.d. | 0.02 |
| mm4_intergenic_Gm14083|Gm14082_chr2_143134703_R | Primer3: not found at this Tm | N.d. | 0.02 |
| mm4_exon_Col23a1_chr11_51290173_F | Primer3: not found at this Tm | N.d. | 0.02 |
| mm4_exon_Col23a1_chr11_51290173_R | Primer3: not found at this Tm | N.d. | 0.02 |
| mm4_intergenic_Gm26166|Tsc22d2_chr3_58415195_F | Primer3: not found at this Tm | N.d. | 0.02 |
| mm4_intergenic_Gm26166|Tsc22d2_chr3_58415195_R | Primer3: not found at this Tm | N.d. | 0.02 |
| mm4_intergenic_n-R5s42|Fam19a5_chr15_87624239_F | Primer3: not found at this Tm | N.d. | 0.02 |
| mm4_intergenic_n-R5s42|Fam19a5_chr15_87624239_R | Primer3: not found at this Tm | N.d. | 0.02 |
| mm4_intergenic_Gm6465|4933402N22Rik_chr5_11907435_F | Primer3: not found at this Tm | N.d. | 0.02 |
| mm4_intergenic_Gm6465|4933402N22Rik_chr5_11907435_R | Primer3: not found at this Tm | N.d. | 0.02 |
| mm4_exon_Dnah2_chr11_69429474_F | Primer3: not found at this Tm | N.d. | 0.02 |
| mm4_exon_Dnah2_chr11_69429474_R | Primer3: not found at this Tm | N.d. | 0.02 |
| mm4_intergenic_Wdfy3|Arhgap24_chr5_102087833_F | Primer3: not found at this Tm | N.d. | 0.02 |
| mm4_intergenic_Wdfy3|Arhgap24_chr5_102087833_R | Primer3: not found at this Tm | N.d. | 0.02 |
| mm4_intergenic_Gm23708|G6pd2_chr5_60850249_F | Primer3: not found at this Tm | N.d. | 0.02 |
| mm4_intergenic_Gm23708|G6pd2_chr5_60850249_R | Primer3: not found at this Tm | N.d. | 0.02 |
| mm4_intron_Sh3rf3_chr10_59119200_F | Primer3: not found at this Tm | N.d. | 0.02 |
| mm4_intron_Sh3rf3_chr10_59119200_R | Primer3: not found at this Tm | N.d. | 0.02 |
| mm4_intergenic_4930448K12Rik|Pard3b_chr1_62004699_F | TCGTCGGCAGCGTCAGGGCCTGATGATGGAGCTA | 60.1 | 0.02 |
| mm4_intergenic_4930448K12Rik|Pard3b_chr1_62004699_R | GTCTCGTGGGCTCGGGCCTGCCCATAACCTTGTCT | 60.0 | 0.02 |
| mm4_intergenic_Tbc1d30|Gns_chr10_121351172_F | Primer3: not found at this Tm | N.d. | 0.01 |
| mm4_intergenic_Tbc1d30|Gns_chr10_121351172_R | Primer3: not found at this Tm | N.d. | 0.01 |
| mm3_intergenic_Gm24812|Gm14774_chrX_87973977_F | Primer3: not found at this Tm | N.d. | 0.01 |
| mm3_intergenic_Gm24812|Gm14774_chrX_87973977_R | Primer3: not found at this Tm | N.d. | 0.01 |
| mm4_intron_Tenm3_chr8_48451072_F | Primer3: not found at this Tm | N.d. | 0.01 |
| mm4_intron_Tenm3_chr8_48451072_R | Primer3: not found at this Tm | N.d. | 0.01 |
| mm3_exon_Tap1_chr17_34189298_F | TCGTCGGCAGCGTCTTCACCCGCAACATATGGCT | 60.0 | 0.01 |
| mm3_exon_Tap1_chr17_34189298_R | GTCTCGTGGGCTCGGAGACAGAGTCCCAGATCCCC | 60.0 | 0.01 |
| mm4_intergenic_Gm9932|Gm8091_chr5_100215564_F | Primer3: not found at this Tm | N.d. | 0.01 |
| mm4_intergenic_Gm9932|Gm8091_chr5_100215564_R | Primer3: not found at this Tm | N.d. | 0.01 |
| mm4_intron_Fars2_chr13_36462470_F | Primer3: not found at this Tm | N.d. | 0.01 |
| mm4_intron_Fars2_chr13_36462470_R | Primer3: not found at this Tm | N.d. | 0.01 |
| mm4_exon_Pex26_chr6_121194055_F | Primer3: not found at this Tm | N.d. | 0.01 |
| mm4_exon_Pex26_chr6_121194055_R | Primer3: not found at this Tm | N.d. | 0.01 |
| mm4_intron_Nsg2_chr11_32048664_F | Primer3: not found at this Tm | N.d. | 0.01 |
| mm4_intron_Nsg2_chr11_32048664_R | Primer3: not found at this Tm | N.d. | 0.01 |
| mm4_exon_Tmsb10_chr6_72957835_F | TCGTCGGCAGCGTCTCGGGGTGGGAAGATAGTGG | 60.6 | 0.01 |
| mm4_exon_Tmsb10_chr6_72957835_R | GTCTCGTGGGCTCGGAAACCGAGACGCAGGAGAAG | 60.0 | 0.01 |
| mm4_intergenic_Gm23892|Gm25382_chr10_16939209_F | Primer3: not found at this Tm | N.d. | 0.01 |
| mm4_intergenic_Gm23892|Gm25382_chr10_16939209_R | Primer3: not found at this Tm | N.d. | 0.01 |
| mm3_exon_Ubash3b_chr9_41157483_F | TCGTCGGCAGCGTCCTGTACAGCTCCTCGCGC | 60.5 | 0.00 |
| mm3_exon_Ubash3b_chr9_41157483_R | GTCTCGTGGGCTCGGGAGATCTGGGAGCACCGC | 59.8 | 0.00 |
| mm4_exon_Cabp1_chr5_115168959_F | TCGTCGGCAGCGTCTCCAGTTGCAAGAGTTGTGAGT | 60.0 | 0.00 |
| mm4_exon_Cabp1_chr5_115168959_R | GTCTCGTGGGCTCGGCAGGATGTACTGGCGGATGG | 60.2 | 0.00 |
| mm4_intergenic_Lrpap1|Adra2c_chr5_35198749_F | TCGTCGGCAGCGTCCATTTGCCTTCCCATGTGGC | 60.1 | 0.00 |
| mm4_intergenic_Lrpap1|Adra2c_chr5_35198749_R | GTCTCGTGGGCTCGGCAGAGGAGGGAAGGGAAGGA | 59.9 | 0.00 |
| mm4_intron_Gnao1_chr8_93821532_F | TCGTCGGCAGCGTCGATGAGGGAAGGAGCAGAGC | 59.8 | 0.00 |
| mm4_intron_Gnao1_chr8_93821532_R | GTCTCGTGGGCTCGGGAGGTCCCATCAGAAGCAGG | 59.8 | 0.00 |
| mm4_intergenic_Gm23965|Gm23537_chr1_104140980_F | Primer3: not found at this Tm | N.d. | 0.00 |
| mm4_intergenic_Gm23965|Gm23537_chr1_104140980_R | Primer3: not found at this Tm | N.d. | 0.00 |
| mm4_intron_Ccdc171_chr4_83834376_F | Primer3: not found at this Tm | N.d. | 0.00 |
| mm4_intron_Ccdc171_chr4_83834376_R | Primer3: not found at this Tm | N.d. | 0.00 |
| mm4_intergenic_Gm6984|Htr2a_chr14_74087701_F | Primer3: not found at this Tm | N.d. | 0.00 |
| mm4_intergenic_Gm6984|Htr2a_chr14_74087701_R | Primer3: not found at this Tm | N.d. | 0.00 |
| mm4_exon_Abcb9_chr5_124087988_F | Primer3: not found at this Tm | N.d. | 0.00 |
| mm4_exon_Abcb9_chr5_124087988_R | Primer3: not found at this Tm | N.d. | 0.00 |
| mm4_intron_Sh3gl3_chr7_82174331_F | Primer3: not found at this Tm | N.d. | 0.00 |
| mm4_intron_Sh3gl3_chr7_82174331_R | Primer3: not found at this Tm | N.d. | 0.00 |
| mm4_intron_Prdm10_chr9_31349287_F | Primer3: not found at this Tm | N.d. | 0.00 |
| mm4_intron_Prdm10_chr9_31349287_R | Primer3: not found at this Tm | N.d. | 0.00 |
| mm4_intron_Pdia5_chr16_35401466_F | TCGTCGGCAGCGTCTACTCACAGCCTGTAGCCCT | 59.9 | 0.00 |
| mm4_intron_Pdia5_chr16_35401466_R | GTCTCGTGGGCTCGGTGTGTGAGGCAGCTCATGTT | 59.8 | 0.00 |
| mm4_intron_Fcrla_chr1_170922172_F | TCGTCGGCAGCGTCGCCTTCGTGATTGACCCAGA | 60.0 | 0.00 |
| mm4_intron_Fcrla_chr1_170922172_R | GTCTCGTGGGCTCGGGATCCCAGTGCCTCAAACCA | 59.9 | 0.00 |
| mm4_intron_F2r_chr13_95605704_F | TCGTCGGCAGCGTCTGCAGAGGCCCTCAATTACC | 59.7 | 0.00 |
| mm4_intron_F2r_chr13_95605704_R | GTCTCGTGGGCTCGGCTGATGCTAGAGGGGCAAGG | 59.8 | 0.00 |
| mm4_intron_Cadps_chr14_12729888_F | TCGTCGGCAGCGTCCTGCAACCTTAGACCCCTGG | 60.0 | 0.00 |
| mm4_intron_Cadps_chr14_12729888_R | GTCTCGTGGGCTCGGTGGTCTAGACTGGCTGACCA | 59.8 | 0.00 |
| mm4_intron_Brd4_chr17_32198318_F | Primer3: not found at this Tm | N.d. | 0.00 |
| mm4_intron_Brd4_chr17_32198318_R | Primer3: not found at this Tm | N.d. | 0.00 |
| mm4_intergenic_Tshz2/Gm26883|Gm26883_chr2_169687411_F | TCGTCGGCAGCGTCTGAGAACAGACAAGGAGGCA | 58.5 | 0.00 |
| mm4_intergenic_Tshz2/Gm26883|Gm26883_chr2_169687411_R | GTCTCGTGGGCTCGGACCCTGCTTTCAAGTGCTGT | 60.1 | 0.00 |
| mm4_intergenic_Smad7|Ctif_chr18_75396270_F | Primer3: not found at this Tm | N.d. | 0.00 |
| mm4_intergenic_Smad7|Ctif_chr18_75396270_R | Primer3: not found at this Tm | N.d. | 0.00 |
| mm4_intergenic_Sh2b3|Fam109a_chr5_121843046_F | Primer3: not found at this Tm | N.d. | 0.00 |
| mm4_intergenic_Sh2b3|Fam109a_chr5_121843046_R | Primer3: not found at this Tm | N.d. | 0.00 |
| mm4_intergenic_Scgb1c1|Odf3_chr7_140847606_F | TCGTCGGCAGCGTCTGCTGGAGATGTGCATAGCC | 60.1 | 0.00 |
| mm4_intergenic_Scgb1c1|Odf3_chr7_140847606_R | GTCTCGTGGGCTCGGGACAATGACCTCTGGCCCAA | 59.9 | 0.00 |
| mm4_intergenic_Large|Gm23255_chr8_73372431_F | Primer3: not found at this Tm | N.d. | 0.00 |
| mm4_intergenic_Large|Gm23255_chr8_73372431_R | Primer3: not found at this Tm | N.d. | 0.00 |
| mm4_intergenic_Hs1bp3|Rhob_chr12_8453575_F | TCGTCGGCAGCGTCGTGGGTGGCGGTTGATAGAA | 60.0 | 0.00 |
| mm4_intergenic_Hs1bp3|Rhob_chr12_8453575_R | GTCTCGTGGGCTCGGGGGCTGGAAAGAGTACCTGG | 59.7 | 0.00 |
| mm4_intergenic_Gm22302|Uri1_chr7_37887059_F | Primer3: not found at this Tm | N.d. | 0.00 |
| mm4_intergenic_Gm22302|Uri1_chr7_37887059_R | Primer3: not found at this Tm | N.d. | 0.00 |
| mm4_intergenic_Gm15208|Bcl11b_chr12_107790540_F | Primer3: not found at this Tm | N.d. | 0.00 |
| mm4_intergenic_Gm15208|Bcl11b_chr12_107790540_R | Primer3: not found at this Tm | N.d. | 0.00 |
| mm4_intergenic_Gm15083|Slc6a11_chr6_114084454_F | Primer3: not found at this Tm | N.d. | 0.00 |
| mm4_intergenic_Gm15083|Slc6a11_chr6_114084454_R | Primer3: not found at this Tm | N.d. | 0.00 |
| mm4_intergenic_Gm14943|Gm14945_chrX_121878361_F | Primer3: not found at this Tm | N.d. | 0.00 |
| mm4_intergenic_Gm14943|Gm14945_chrX_121878361_R | Primer3: not found at this Tm | N.d. | 0.00 |
| mm4_intergenic_Fbxo2|Ptchd2_chr4_148184788_F | TCGTCGGCAGCGTCCTAGAATTCCCCGGCACAGG | 60.1 | 0.00 |
| mm4_intergenic_Fbxo2|Ptchd2_chr4_148184788_R | GTCTCGTGGGCTCGGAGGAACTGCTCTGATGCCAG | 59.7 | 0.00 |
| mm4_intergenic_Epm2a|Gm9797_chr10_11467790_F | Primer3: not found at this Tm | N.d. | 0.00 |
| mm4_intergenic_Epm2a|Gm9797_chr10_11467790_R | Primer3: not found at this Tm | N.d. | 0.00 |
| mm4_intergenic_Cd209a|Gm24934_chr8_3754069_F | TCGTCGGCAGCGTCCTGTCCCTCATGCTGGACTG | 60.1 | 0.00 |
| mm4_intergenic_Cd209a|Gm24934_chr8_3754069_R | GTCTCGTGGGCTCGGCACTGCATCAGGGCCAAAAC | 60.0 | 0.00 |
| mm4_intergenic_Bahcc1|Actg1_chr11_120336664_F | TCGTCGGCAGCGTCCAGGGAGTTCTGAACCACCC | 59.9 | 0.00 |
| mm4_intergenic_Bahcc1|Actg1_chr11_120336664_R | GTCTCGTGGGCTCGGGCCCAGGGACATCTCAGAAC | 60.1 | 0.00 |
| mm4_intergenic_4930569F06Rik|Suds3_chr5_117068470_F | TCGTCGGCAGCGTCAAACATCCTGAGGGAGGGGA | 59.8 | 0.00 |
| mm4_intergenic_4930569F06Rik|Suds3_chr5_117068470_R | GTCTCGTGGGCTCGGTTTCTGCTGGACTGGCTGC | 60.6 | 0.00 |
| mm4_intergenic_4632428C04Rik|Hes1_chr16_30063398_F | Primer3: not found at this Tm | N.d. | 0.00 |
| mm4_intergenic_4632428C04Rik|Hes1_chr16_30063398_R | Primer3: not found at this Tm | N.d. | 0.00 |
| mm4_exon_Slc25a42_chr8_70184643_F | TCGTCGGCAGCGTCTACATGGTGCAACCTGCTGA | 59.6 | 0.00 |
| mm4_exon_Slc25a42_chr8_70184643_R | GTCTCGTGGGCTCGGGTGTACTGCCACTCCCTTCC | 60.0 | 0.00 |
| mm4_exon_Scand1/Cnbd2_chr2_156311895_F | TCGTCGGCAGCGTCAACTCAGGGGTAGGGTGTCA | 59.8 | 0.00 |
| mm4_exon_Scand1/Cnbd2_chr2_156311895_R | GTCTCGTGGGCTCGGCAGCTGCAGGCCATTCTACC | 61.1 | 0.00 |
| mm4_exon_Pcdhga9_chr18_37821167_F | Primer3: not found at this Tm | N.d. | 0.00 |
| mm4_exon_Pcdhga9_chr18_37821167_R | Primer3: not found at this Tm | N.d. | 0.00 |
| mm4_exon_Macf1_chr4_123527047_F | TCGTCGGCAGCGTCAGCAGGTGAGCAATGACTGT | 59.6 | 0.00 |
| mm4_exon_Macf1_chr4_123527047_R | GTCTCGTGGGCTCGGAGAGATCCAGACTGCTCACCT | 59.9 | 0.00 |
| mm4_exon_5033430I15Rik_chr13_45965361_F | Primer3: not found at this Tm | N.d. | 0.00 |
| mm4_exon_5033430I15Rik_chr13_45965361_R | Primer3: not found at this Tm | N.d. | 0.00 |
| mm3_exon_Celf3_chr3_94485573_F | TCGTCGGCAGCGTCAGCCATCAACACCCTTCACA | 59.5 | 0.00 |
| mm3_exon_Celf3_chr3_94485573_R | GTCTCGTGGGCTCGGCAAGTGTGCCAGTGGGAGAG | 60.6 | 0.00 |
These only list off-targets that have primers in the table above. Primers underlined, off-targets in bold.
| mm4_intergenic_Stx1b|Stx1b/Stx4a_chr7_127816451 |
GTTGGGCGGAAGGTACAAGAGGGCTCCCCTGGGATCCCCATTCCTCTCTGCCTGGAACAGAATTCTCAGGGTAAAGTTGA GCTCAGCCATCAACAGACATTAAATCTGGAGGTCTAAGCAGTGCCAGGGTTCA |
| mm3_exon_Mlc1_chr15_88958084 |
GAAGGCAGGCTACTCACCTCCCCTGCTGGCCGCTCCTGGGGACAGGACTGGGGGTCCCAGGATGCAGCCTGCAGCCGGGC GCTGACTTTGAAGCTCAC |
| mm4_intergenic_mmu-mir-6348|mmu-mir-6354_chr1_169003140 |
CCGAGCATAGCAGTGAGGATTTTATGCTAATAGCACCCATAATCCCATGCTAATTTATTTTATCAAATTAAAGCAAATGC TGCTCTCTGACCCCAGGGACCTCCATTCTCCTCTGGGTCCCTGTGGTAAGCTGGAA |
| mm4_intergenic_Gm24912|Kcnk16_chr14_20224990 |
TTGAGCCTCAGACTGGGACAGGGTGAGGAGACTGAGGGTCCCAGGTCATAGAATATAACTAAGGTTGTGTCCAATGTGAG GAACGTGTAAGGACCTCTTTGCATTTCATCCTTTGGCCCCTTCC |
| mm4_intergenic_Gm3993|Gm10479_chr12_20267804 |
AAACAAGTGGGAGGTGGCTGTGTGATCCAGGGACCCTCATTCCCCACCCCCTAAAAAGATGAAAGTAGGGCTGTCTGATC AATGAAGCCTGGGTTAGTTTCATGGCCAGGGCTAGGTATG |
| mm4_intergenic_Gm20474|Gm10330_chr12_23719776 |
CAGCCCTGGCCATGAAACTAACCCAGGCTTCATTGATCAGACAGCCCTACTTTCATCTTTTTAGGGGGTGGGGAATGAGG GTCCCTGGATCACACAGCCACCTCCCACTTGTTT |
| mm4_intergenic_2410018L13Rik|Gm26140_chr12_23098909 |
CAGCCCTGGCCATGAAACTAACCCAGGCTTCATTGATCAGACAGCCCTACTTTCATCTTTTTAGGGGGTGGGGAATGAGG GTCCCTGGATCACACAGCCACCTCCCACTTGTTT |
| mm4_intron_Galnt18_chr7_111679731 |
AATAGACTCCCAGCCAGCCTAAGCTCTGGCCTTTTGTTTCCATCTGATAGTGGGAGGAGACTGGGAGACCCAGGAGAGAT GATAGAAAGTGTTAGACACTAGGATGGTGTGAGGGAGACA |
| mm4_intergenic_Sox2ot|Gm20446_chr3_34212140 |
GCTGGAACTAGCTCCCCTTGTCTGTGTGTGCTTCCTGGCTTTATCCTGGGGTCCCCAGTCCGCTCCCGGGGAGGTGTAGC TTGCACCCAGTCT |
| mm4_intergenic_Ajap1|Gm25880_chr4_153867446 |
GGAGCTAGGAGAGGGAGCTTGAGGATATCCTTAGCTGCACAGCAAGTTTGAGGTCAGACCGAGCTACACAAAGCGTTACA GAGGGGACAGGGAGCCCCGGGAGCCCTTGTGTTCCCCATTGGA |
| mm4_intergenic_Tab2|Ust_chr10_8186020 |
CATTCCTCTTACCTCCGGCCAAAGGAATCACGGTTCTCCAGTTAACCTGTGGTGCCTGTCAGCATACTGAGGTCTGTGCT AGCCCCCAGGGTCCCTCAGTCCCTTCCCACAAACCCCTCCACCAGTCTC |
| mm4_intergenic_Fbxo24/Pcolce|Gm16089_chr5_137613898 |
GATGGGGCGTTGCAGATAGTGAACCTGAGAACGGACAGACAACATGGCCAGGGGGGTTAAGGTGGGAATACTAGAGGCCT GGAGGGAAGTGGGGATCCCAGGTTGGAGAAAGGCTGAATGGAAGGCTTGG |
| mm4_intergenic_Ogg1/Camk1|Camk1_chr6_113336306 |
GCAGAGTTGCCTGTGAGGATTGGGGCAGGCCTGGGACCCCCAGGTCCCACCCTAACACAACTTAGAGTGGGAGCTCTCAC CATG |
| mm4_intron_Gm21887_chrX_170009701 |
CTCCAGGGTCCCCGGTTCNNNNNNNNNNNNNNNNNNNNNNGTGACGTGAGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNGGGCCCCGGCTGCAGAACCGTGACGTACAA |
| mm4_intergenic_Gm21857|Erdr1_chrY_90784617 |
CTCCAGGGTCCCCGGTTCNNNNNNNNNNNNNNNNNNNNNNGTGACGTGAGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNGGGCCCCGGCTGCAGAACCGTGACGTACAA |
| mm4_intergenic_Gm15208|Bcl11b_chr12_107824878 |
GTCTGTCCACTCCACACAGGGGTCTGTGACACTCCATGTTAGGTTATCACCCCTGTCTTCTCACCACACAGAACAAATTG GTTTGCAACGGTGGGGACTGGGGACTCCAGGAAAGCAGAGCTGCCTCCTGAAGAC |
| mm4_intron_Dync1li1_chr9_114689392 |
ACATCCGTTCGCCCACTGCCTTTGTGCGGACACTCGGGCCCGGCTGCGCCCCGCCTCCCGGCTTGCTGCTGACAGCTGGG GGGACAAGGGGTCCCTGGTCCTTCCGGCCTGGACCCTCCGGTCTTTTCTCCTCCCT |
| mm4_intron_Dnah8_chr17_30707514 |
CCATGATGCCACTGGACCTTCAGAGTGGACTAGGGGTCCACGGGACCGTGTAGGAGGCTGAGGATACCCTTTCTCTCTGC GCCTTTCTTCTTCCCTCT |
| mm3_intron_Phactr3_chr2_178265789 |
GGCACTGATACAGGCAATGCAGTCCTGCAGTGGTAGATGGGACTGGGGGTCCCTGGGCCTTTCAGGGGCAGCTTTGTTAT AGTGATGATGATGAGGTATGGCTGTAAATCACAGCAGACATGGGCCCTTTCTCA |
| mm4_intergenic_Sik1|Hsf2bp_chr17_31870295 |
GTGGAAGCCTCAGAAGGACCTGTCCATGGTCCCCCAGTTCCCTCCCTGACTTCTGCCTTAGAGAGGCTTTTCTGCCTTGC CAGTATCGT |
| mm4_exon_Rexo1_chr10_80561455 |
AGCCGGTAGAACGTAGCATGGTCCGTTCCGCAGCGGGGCCCCGGCCCGGAGATACCCGGGACCCCGGGACCCCTCCTCAC ACTCGCCCCGGAGGCTTCCGCTCGCGCTTTTCGGACCC |
| mm4_intergenic_Gm11371|Gm11372_chr13_31079554 |
GCTGAGGGAGAAGCAGGAAGGAAAGGTCTCCAGGGACCCCCAGTGCACTTAGTGTCATGGGTGTTGTCACTGTCCCTTCT ACACTCACAGAGAAGAGAAAGAGAATTTAACCTGCAAGAGAGGGCTGTGAA |
| mm4_intergenic_Tshz3|Zfp536_chr7_37434209 |
GCTACCACCTCTGGGTTCACTTTGTTTGTCTACTGTTTAGGAAAGTCTCCATTTCACGAGGGAGGAGTGGGCTGGGGGTC ACTGGCCAGCTGGTAACTCTACAGAAGCATCCGAGTGCTC |
| mm4_intron_Slc39a10_chr1_46853391 |
GAACACACGCGTCCCAACCCAGAGGCCCCGGTGCCAGCCCCAACCCGGCCGCCCAGCCTCCCCAGCCGTCCCGGGACTCC CAGGCTCCGCCGCGCACGGGGCCGGTTCTGGGGGAGGGAATGTAAACAAATCGGGGT |
| mm4_exon_Sema6c_chr3_95171813 |
GTCTCACTGGCTCTGACCTGGTCTCTGTTACCAGTGCTTCTGGGTCCTGGCCCTTCCCCTGAGACCCCCAGTTCCCCCAG TGATGCCCAACAAGGGCCCCAGTCTTCCACTCTTGGAGCTCACACACAGGGTAAGGG |
| mm4_intergenic_Gm25942|Ptprz1_chr6_22854193 |
TACTGAGGGTGCAGGGAGGAGACCGGAGGGCACTGAGGGTGCAGGGCAGAGCTCGGAGGGCACTGAGGGTTCAGGGAGGA GCCCGGAGGGTACTGAGGGTGCA |
| mm4_intergenic_Gm25942|Ptprz1_chr6_22854013 |
GGAGGGCACTCAGGGTGTAGGGCGGAGCCCGGAGGGCACTGAGGGTTCAGGGCAGAGCTCGGAGGGCACTGAGGGTTCAG GGAGGAG |
| mm4_intergenic_Gm25942|Ptprz1_chr6_22853953 |
AGAGGGCACTGAGGGTGTAGGGCGGAGCCCGGAGGGCACTGAGGGTTCAGGGCAGAGCTCGGAGGGCACTCAGGGTGTAG GGCGGAGCCCGGAGGGCACTGAGGGTTCAGGGCAG |
| mm4_intron_Txn1_chr4_57956046 |
CACGAGTGCATCTCCCGTACCCGGCGTTCCAGGGTCCCCTCGTCCCCTCCCCCAGGGCATGCTCCACCGCCGAGGGCGCA CACAGGCCCTGGGCCGCTAAGCCCGCGGGGACACCGAGAGTGTCCTCTTCAGCACCG |
| mm4_exon_Tmem200c_chr17_68837369 |
CGGAGGACCTGACACTTCTTGGAAACTCTTGGAAATGGCTTCCGCCACCGCGCCTGAGGGGACTGCGAGCCCCTGGCGCA GGTTCGTCCCCACCGG |
| mm4_intron_Dlgap4_chr2_156684937 |
GACGAGGTGTGTCAGGACTGAATGGGTATCTGGCTGAGAGACGGAGGGGGCCGGAGGACCCTGGATTCTCCCCTTTGTCT CATGGCC |
| mm4_exon_Gorab_chr1_163396961 |
ACCAGGTAGCTTTCCATCGCCAGAGGAAGAGGTGGGTGTGAGGGGACTGGGGGCCACAGGGGAAGGAGAGCGTGGCTTTT GA |
| mm4_intergenic_Ostc|Rpl34_chr3_130720900 |
GCTCTAGAGGACAGGGATGCTCAGGCCTCACGGATGGGTTTGGGGATCCCAGGGCAGGAGCTTCTGGGCCAGTGTGTAGA CAGGGAACGCA |
| mm4_exon_Irx6_chr8_92674611 |
TATCCGAGAGTGCGTGCATGTACACGGGCTGGCTGCCCTTGGCACACTCGGTNNNNNNNNNNNNNNNNNNNNNNNNTCCC CTCTGGCGGCCGGGGATTACCGTGACGTCAC |
| mm4_intergenic_Zzz3/Ak5|Ak5_chr3_152468330 |
TGGCAGCAGGCAGGTAAAATAGGATAGATTTCAGAAGTGGAGTCTTATAGAGCAAAGGAAGCTAGAGGAACAGGGTTGAC CCAGAACCCCCAGTCTCCTCTGAATTTCTCCTCTGGTTCTTCACAGGCTCCTCAGC |
| mm4_intergenic_Nubpl|Arhgap5_chr12_52504435 |
GAGGAGACCGGCGTTGTTAGGTAGGACCTCGGAGAGCCCGCTGCGCGGGGCCTGCCTCTCCCCTCCCGCCGGGGACCCTC GGTCGCCGCCGCCGCCGCCGGTTGTAACCAGTTGAAGGGGCTGG |
| mm4_intergenic_Zdhhc12|Zer1_chr2_30097237 |
ACCTCTGACCGTGTACCTCAGCCCAGTATCCCCCAGTCTCCTCCGGAAAGAAAAGACACCACTCTCCTGCACTTTGCACA AAATGTATTTCTGTGACATCCTGAAGTACAGACATTTCCCCAGACCCAGG |
| mm3_intron_Urgcp_chr11_5740796 |
ACGCAAGCAAGTCTAAACGCCAGAAACACACGTCAGGCCTGCTAAGCCGCTCTGCGGCCTCAGCCGAGCCCTAGGACCCC GAGTCCCCTCCCGCAGCTTCCTTGCTGCCCCTCTCCAGAACCCGTTTC |
| mm4_intergenic_Gm5335|A730056A06Rik_chr7_73099427 |
GGGGCCAAAGCTATGGAAACACCAATGGGAAGTGTGTTAGACAGCTGAGCACAGTATGATAGGCTGGAGGGGGCGGGGGG ACCCTGGGAGAAGATGAGTGCTACTCTATGCTCTGTGCTCTGACTTTGCCCAA |
| mm4_intergenic_2310007B03Rik|E030010N08Rik_chr1_93183142 |
CTGACATCTGGAATGCCCCAGCCACTGGGGACAGCAGTGCCTCAGTTTACAACCCTATAAATTAAATATCTCCAGGGACC CCCAGAACCCTGCCTCCTGCCAATCTCACCACTCCCATAGTATCCCCAGGCC |
| mm4_intergenic_Lce3f|Crct1_chr3_93000054 |
AATTTGGGAGCTGGATGGGGGAAGCTCCANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNTCCCAGGAGAGATTGACATTTTGCTTCCAGGTTGTCTCAGGAGGCAG |
| mm4_intergenic_Hs3st4/Gm27040|Gm25759_chr7_124125634 |
AGGGAAAGAGAATAGCATGCTCTCTCATACAAAAATAGTAGGTGTCCCTCTGAAGGGACAGTGGGTCCCAGGTCTCCAAA AGTATTACCAAAGGAAGTTCCCTTTAGCTTTTGTTGTTTTTTGGCCCTCTGCTCATGT |
| mm4_exon_Inhbe_chr10_127349767 |
ACGAGTTCAGCACCCCTTTTTACTGATTCTCGATTCCAGGGACCCCGACACCCCTCCTTCCTCGGCGCCTGCTCCTCTTC CTCTTGACCTTGTCAAAGCAGGCAATGCACCCTGTTCTTAGCCTG |
| mm4_intron_Lurap1l_chr4_80911660 |
AGATGGTGAGTGTGATGCGTCAGAGGCGACTTGGGGACCCGGGGCCTGGGACCCGAGAGGGTGGCACAGGAGCGGGGGGG GGGGGGGGGGGAGAAGCTGGGAGGAGGTGT |
| mm4_exon_Papln_chr12_83777066 |
GCTCAGTTACATGCGGGACTGGCATCAGGAAGAGGAGTGTCACCTGCCGAGGGGACGAGGGGTCTCCGGTCCATGCTGCA GCGTGCTTGTTGAAGGACCAGCCAACCCTCACGGAGCCCTGTGTACAAGAGGCCTG |
| mm4_exon_Exosc4/Oplah_chr15_76327672 |
GATGGCTCGGCTTACATCGAGCAGGGCAACACCAAGGCACTGGCGGTGGTCTACGGGCCGCACGAGGCGAGTAAGCGGCG GGGACCGGGGGCTCCTGGCCGCACATCAAGGGAGGAGACC |
| mm4_intron_Scn8a_chr15_100954489 |
TTGCAAGAGAGGGCCTAACCCTCCAGGGACCCCCAGTTCCATAGGCCCTGTGTGTGTGTCTTCAGAGCCCTCTGTCCTCC ATCCTCA |
| mm4_intron_Atp6v1h_chr1_5083513 |
CTTTGGTGCCAGCCTTGCCCGGATGGAGCCGGTTTTACCTGGGACCCGCAGTCTGCGCCGACCTTGCTTGTTCAGGCAGC GAGTTCCCACAAAGAGAAATCTAAGTTCCACACTGACTAAGCACTTCGGCAACG |
| mm4_intergenic_Gm25913|Cog5_chr12_31864028 |
GGGAGACGAGTTACCCTGGAGGATGAGGTCTGAGGGGAGTGGAGGTCCAGGGAATCAAAGACTTGTCTGTTTCAGTAACT AAGAGTGATGACAGGGGTGGAAGCAA |
| mm4_intergenic_3930402G23Rik|Irs2_chr8_10961536 |
GCTGGTAGGCCTCCAAACATTTAGGGGAAGCAACAGATGGGAGTGAGGGTCCCAGGAAAAATCTATAAGGTTATGACCAA TGCAGGAGTGGG |
| mm4_exon_Fut2_chr7_45649385 |
GGACAGAGTAGGCAAAGTCCCAAGGACAAGCAACTTGGTGAGGGGACTGTGGGTCCACGGTAGCTCCCGCATCCCTTTTG ATCTGTGCAGTGAAGAACTCCTATTTTGGATCCTAGGCTAAACCAATCCCAGCGTTCTCC |
| mm4_intron_Bnc2_chr4_84393516 |
AGAACCTGAGTGAGCAAAAGGTGGGAGGGGACGGGGGGTAACCGGAAAAGCCTGAGTAAAATATCTAATTCAAAATATTT CCCTCTAAACTCCTTTTATACCCAGACAGGAGATACAAGGA |
| mm4_intergenic_Nefm|Gm22319_chr14_68124931 |
GCAGCCCCTTTATAGCGGAGCAGCTGGTCCCGGGCCAGGGCCCCGCCCCGTGGAGGCGGCGGCCGAGGAGGCGGGGACTG CGGGTACCGGGCCGGGGGTGGGGGGAAGGGGGAGACAAGCCTTGCG |
| mm4_intron_Zfp521_chr18_13942975 |
GTGGCCTCCATCACAAAGGATCTCACTTGCTAACCCAACATTCCAGGTCATCCTTTCGAAGGGGGCTGTGGGACCCTGGA TTTATAGTGTTCTGATCTGAACTAAAGGTTCACTTTTGGAACAGAGGCACAACTGT |
| mm3_intergenic_Gm7361|4930584F24Rik_chr5_26412281 |
GGAGACCAACTTGGGGAAGGAGAGGATTCTGATGGAGCGTTGCACAGGAACAGGAGGGCACTGGGGGTCGCTGGGTGGGT GAAGACAATGTATAATGAT |
| mm4_exon_Phtf2_chr5_20882114 |
CTGGAGCCCAAAGAGCTACANNNNNNNNNNNNNNNNNNNNNTGCCTCCACCCTCGCGCCGCTCGCGCCGCCCGCACCGCG CTCCGCCTCCCGGGACGCCCCGCCTCCTCCGCGGCTCCTCGCATGACCACGGAGTC |
| mm4_intron_Hmcn2_chr2_31428900 |
GTCACCTCTCATGCCACCTCATGTCCTAGCCTCTCTTCATGACAGTTCTGTCCCCGAGGTCCGGTGACCACCTGTCCCCT CTGCACCTCAGCAGGGACTTGTC |
| mm4_intergenic_Irf2bp1|Foxa3_chr7_19011431 |
GAGGTCCAAGGCACTGAGTCAGAGCCAGAGGGCCTTCCTGGGNNNNNNNNNNNNNNNNNNNNNNNAGTTGTGTGACCTTA ATCGTCAAACCAGCTCCATGCCTC |
| mm4_intron_Opcml_chr9_28882551 |
GTGTGTCTGGCCTCTGGATGCTCCCTGACTCCCCTGCTGCACACTCAGTTGTCCTTATCACAAGCTTTCATCATCATCTT GAAACCCTGGGACCACCAGTTCCCTGGGAGGAGAGATTGCCTTGTGTATTTGCAGTCC |
| mm4_intron_Cdh23_chr10_60575233 |
TTAGGGCTGAGGACGCAAAGCTAGGTTCTCTGGGTCTCCTCCTAGAACCTGGGACCCACAGTGACCTCAGGACTCTTTAG TGCAATAGCCAGGCTCTG |
| mm4_intron_Rcvrn_chr11_67702736 |
GAAAAGCCAGAAACCTGCCCAAGCAGAAGACATGGAGTATACGAGTGGCTTCTGGTATCTGGGAGGGTAGTGTGGGTCCC TGGGAATGCTGTACATTCAGTATTTTTGAACAGTTTTACTGGGTGTGGAGGTTGGGTATC |
| mm4_intron_Chst11_chr10_83076364 |
GGCTCCACACAAAGAAGATGCTAAAAGTAGCTTGAGGCCATCTCTGAGGGGAATGGGGAGCCCCGGGTACCCCCTGAGGA GTGCACTTCATGCTCTTGAGCTAATCTTCTCTTTGAAGGATGAGGGCCACG |
| mm4_intergenic_Crip2|Crip1_chr12_113148118 | AAGGCCAGATCTTGTGCCAGACGGGGGGGGGGGGGGGTCCCTGGAGACAAGCTGCTGAAAATAGGCCCTGGG |
| mm3_intergenic_Gm24202|Gm8100_chr8_27770487 |
ACCATCAGTGAGGCAAAGAGAGAGTAGGTCATAAATTGCTTCAAGGGAATCGGAGGGCAATGGGGGGCCCAGGCAGACTC TCTGAATAATCGTTTCTGAGCATCTGC |
| mm4_exon_Ankrd34b_chr13_92438919 |
TGAGACGGACCTGACACTCTTTGGCTTCAAGGATAAGGAGTTGTGTGGGGGCAGTGATAATACCTGGGACCCAGACTCTC CTCCGAGGAAGCCTGTGATAGCCACTAATGGGCCCAAGCTATCCCAGGCTCCAG |
| mm4_intergenic_Il10ra|1700003G13Rik_chr9_45298108 |
ACAATACCCACTGCAGCTCCTCTCCTCTCCCACACACTGACAGGCGCCCTACTGAGGGGACTTGGGGTCTACGGTTAACA TATTTCCAGGTGCCAGGTTCC |
| mm4_intron_Rnaseh2b_chr14_62332415 |
GGGAAAACTCCAAACCCGGAAGCGACGGCAGCGTTTGCGCGGATTCCCTGGGGCGGGTCCAGCCACTCGGCCTGCGGCGG GCAGCGGGGGTCCCGGGACTCTGCTGTCCCCTGGGAGTTACTGGA |
| mm4_intron_Slc25a1_chr16_17927908 |
GCAGACGAGTGGACTTAGGGGTCCCGGGTCGCAACCCCGACACCTCCGCCCCTCCGGAAGTTGGGCGGGGCCTGGGCGTC CCCGGCCCACCCGGAAGCGCTGTCGGACAGGCTCTGAGTTGGGGTTCCGAG |
| mm4_intergenic_Gm26119|Fzd8_chr18_9212628 |
AAGTGTCTGAGCGTGCAGAAGGTCCTACACGAACTCGGGAGGATGAGCCCGGGGGCCACCACTCCGCTCCGGGAGGACTG AGTGCGACTCAGGGGGCGCGGGACAGACCCTGTGGAATTGTGGC |
| mm4_intron_Unc13a_chr8_71638625 |
CCTCGCCTGACCCATAGAGAATTGTTGGAGGGGATGGTTTTACTGAGGGGTCTGTGGGTCACTGGGCAAACGTTTGGATA CCGTGATTGCTCCCTTTCACTCTGGTAGCTCAGAAAGCCCTGGCATGGAAT |
| mm4_intron_Speg_chr1_75405192 |
TCAGGTGCTAGGGCTACTGTGGTCCCCAGGGCTGGGGAGGGGACTGGAGGAGCCGGGTACAGAATAGGTGTCCAGGAAAT AGAACGCTAACGGCTAGGGCCAGGAGATAGTATGGGC |
| mm4_exon_Foxa3_chr7_19014985 |
CCAAGCTTGGGAAGGTGGGCCCCAAGGGCGCAGTGGGGGCTGGGGGTGCCAGGGGTCCTGTAGGCAGTGGGGAGGCCTGA AGCCCTCCGGGAGGGTAGGGAGAGCTGAGTG |
| mm4_intron_Gga1_chr15_78889123 |
ACCTGTACAAGCAGCTGGTCCGGGGCGAGGAGGTCAACGGTGATGCCACAGCCAGCTCCATTCCTGGTATGGAGAGAGCA GGAGGGCTCTGGGGGGCCCAGGTGCGGGGCGGCATGACCTTCAGTGTGACCACG |
| mm3_intron_Trpm5_chr7_143072828 | GGAGAGAGCCAAGGGAGGTACTGAGACTTCGGTGGGGACTGGGGGGACCGGGTTGGTTTCCTCCCATGTGATTGCCC |
| mm4_intron_Gm9428_chrX_5277921 |
TAGTGTCCTGAGCTTCCCTGCCTGCTGCCCCCAGTCCCCTCTGTTTTCCCTGGCTGCTTCCAGGTACCCACCTCCGGGCT CCACCTTGTTCTTTCCAGAACCTCAGTCTGGCT |
| mm4_intergenic_Spin2-ps5|Gm21699_chrX_34297091 |
AGCCAGACTGAGGTTCTGGAAAGAACAAGGTGGAGCCCGGAGGTGGGTACCTGGAAGCAGCCAGGAAAAACAGAGGGGAC TGGGGGCAGCTGGCAGGGAAGCTCAGGACACTA |
| mm4_intergenic_Gm4726|Gm3757_chrX_4840170 |
AGTGCCTCTCCTCCCTTCATTTTAGTGTCCTGAGCTTCCCTGCCTGCTGCCCCCAGTCCCCTCTGTTTTCCCTGGCTGCT TCCAGGTACCCACCTCCAGGCTCCACCTTGTTCTTTCCAGAACCTCAGTCTGGCT |
| mm4_intergenic_Gm4725|Gm9498_chrX_4631253 |
TAGTGTCCTGAGCTTCCCTGCCTGCTGCCCCCAGTCCCCTCTGTTTTTCCTGGCTGCTTCCAGGTACCCACCTCCGGGCT CCACCTTGTTCTTTCCAGAACCTCAGTCTGGCT |
| mm4_intergenic_Gm2933|Gm2964_chrX_33830340 |
AGCCAGACTGAGGTTCTGGAAAGAACAAGGTGGAGCCCGGAGGTGGGTACCTGGAAGCAGCCAGGAAAAACAGAGGGGAC TGGGGGCAGCTGGCAGGGAAGCTCAGGACACTAAAATGAAGGGAGGAGAGGCACT |
| mm4_intergenic_Gm2825|Spin2-ps6_chrX_33013780 |
AGTGCCTCTCCTCCCTTCATTTTAGTGTCCTGAGCTTCCCTGCCTGCTGCCCCCAGTCCCCTCTGTTTTCCCTGGCTGCT TCCAGGTACCCACCTCCGGGCTCCACCTTGTTCTTTCCAGAACCTCAGTCTGGCT |
| mm4_intergenic_Gm2223|Gm2231_chrX_33531098 |
AGCCAGACTGAGGTTCTGGAAAGAACAAGGTGGAGCCCGGAGGTGGGTACCTGGAAGCAGCCAGGGAAAACAGAGGGGAC TGGGGGCAGCAGGCAGGGAAGCTCAGGACACTAAAATGAAGGGAGGAGAGGCACT |
| mm4_intergenic_Gm2182|Gm2854_chrX_33353410 |
TGCCTCTCCTCCCTCCATTTTAGTGTCCTGAGCTTCCCTGCCTGCTGCCCCCAGTCCCCTCTGTTTTCCCTGGCTGCTTC CAGGTACCCACCTCCGGGCTCCACCTTGTTCTTTCCAGAACCTCAGTCTGGCT |
| mm4_intergenic_Gm14350|Gm14349_chrX_4077588 |
AGTGCCTCTCCTCCCTTCATTTTAGTGTCCTGAGCTTCCCTGCCTGCTGCCCCCAGTCCCCTCTGTTTTCCCTGGCTGCT TCCAGGTACCCACCTCCGGGCTCCACCTTGTTCTTTCCAGAACCTCAGTCTGGCT |
| mm4_intergenic_Gm14332|Gm14334_chrX_3327525 |
AGCCAGACTGAGGTTCTGGAAAGAACAAGGTGGAGCCCGGAGGTGGGTACCTGGAAGCAGCCAGGGAAAACAGAGGGGAC TGGGGGCAGCAGGCAGGGAAGCTCAGGACACTA |
| mm4_intergenic_Gm25942|Ptprz1_chr6_22854223 |
TGAGGGTTCAGGGAGGAGCCCGGAGGGTACTGAGGGTGCAGGGAGGAGCCCGGAGGGCACTAAGGGTGCTGTAGGCACCG AGTGCTTTTGGAAGGA |
| mm4_intergenic_Gm25942|Ptprz1_chr6_22854133 |
CGGAAGGCACTGAGGGTTCAGGGAGGAGCCCGGAGGGTACTGAGGGTGCAGGGAGGAGACCGGAGGGCACTGAGGGTGCA GGGCAGAGCTCGGAGGGCACTGAGGGTTCAGGGAGGAG |
| mm3_intergenic_Gm14275|Gm14273_chr2_172297083 | TACTTTGGATTGCGTGGCCTTTTTCTTGGGACCCCCAGGCCCATCTGTACTATTGCTCAGGACCACCCC |
| mm4_intergenic_Gata2|Dnajb8/1700031F10Rik_chr6_88207947 |
TCTCTGATGCCCTGGTACCAATGCCCCTGAGGGCTCATCTCTAGTCACCATGATCTTGTTACAAGTGTCAAAGTCTGATC CGGGCACCCCCATTCCCCCACGTCTCTTAAGCCCCACACTCCTGACCACTTGCT |
| mm4_intron_Atp8a1_chr5_67671237 | GCCACATCACATCCAGGCTACGGCGGAGGGGGCTGGGGGCAGCTGGTGGCTGTTCTGAAGGAGACAGGTGTGTGC |
| mm4_intron_Begain_chr12_109052609 |
ATCGGCGCAAACTTCGCTACCCCGGCCCCGACAACTGTCGGCGCAACGGCGGGGACGCGGCGCCGGGGTCTTGGGGTCCC GGGGTCCCAGGGGACGAGCGCGCGAGGGCCTTGGGGACCGGTCGGGGATGAC |
| mm4_intergenic_Gm13018|Prdm2_chr4_142594035 |
CCCCTGTACGTGTTAACCCCATACGCACGGACCCCATATGCGCTGACCCCAAATGCGCTGCCCCGGGCTCCCCACTCCCC TCAGGAGAAAGTGACGTGGCAGTGAGAG |
| mm4_intron_Rbms2_chr10_128149559 |
TAAGCTGGAGAATGCCCTGGAGGCTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGGCGGGGACTGGTGGTCC TTGGGTCTTTTGAGGCAAAGAGTCATAAGGAATGACTGTCGGCCAG |
| mm4_intergenic_Fst|Gm25950_chr13_114460496 |
CCGCCGCTTTTCGCTTTATAATTACAGTCATGAGGACGGAGCGGCGGGGAGGGGAGTGGGTGACCCGGGAGAGCCGGCTT TTTGCTCACTTTAGACGGCTCTGGGG |
| mm4_intergenic_Mcm9|Asf1a_chr10_53566680 |
AGAGGCAAGTCATCCCTAGGAATGATAGAATTTCATCCTTGGCGGTGAGGACTGTGGGTGCCTGGATTAGATGTTTTCTA TCTATGGTAATAGCCTTGTAAGAGTTATGTTTAGTCCCAGAGAAGTAACCTGAGGA |
| mm4_intergenic_4930448K12Rik|Pard3b_chr1_62004699 |
AGGGCCTGATGATGGAGCTAAGGGAACAACAGGCTGCTCACCTCTGCTGACTAGGCCCCGGGTGGGACTGGATGTCCCTG GGACCCAGCAGGCTCCTTAGACAAGGAGACAAGGTTATGGGCAGGC |
| mm3_exon_Tap1_chr17_34189298 |
TTCACCCGCAACATATGGCTCATGTCCATTCTCACCATAGCCAGGTGTGGAGGATGGGAATGGGGGTCCCAGAGCAGAGG GGACTGGCTGTTGGGACTGTCATTTAAGTTACACTTCTGTGGGGATCTGGGACTCTGTCT |
| mm4_exon_Tmsb10_chr6_72957835 |
TCGGGGTGGGAAGATAGTGGCCGGATGGGGGTGGGGGTGCCGGGCTGGCACAGCAGGGAAGGGAGGAGCGCTGGGGTGGG AACCCGGGGCACACTTACTCTCTTTGGTCGGCAGGGTGTTCTTCTCCTGCGTCTCGGTTT |
| mm3_exon_Ubash3b_chr9_41157483 |
CTGTACAGCTCCTCGCGCGCGGCCATGCCGAGGGCTGGGGTCGCGGTGCCGAGTGCCCGCTCAGTGGCCGCCCATCGCCC GCGCGCCGGGGACTGGGGGTCCGGGGAGGACGGTGGGGGCGGTGCTCCCAGATCTC |
| mm4_exon_Cabp1_chr5_115168959 |
TCCAGTTGCAAGAGTTGTGAGTCTTTCACAGTGCGGAGGGGTGGGGGGGTCCGGGGTGGGCACCTCCCCAGGGTGCAGGC AGGCCCCATCCGCCAGTACATCCTG |
| mm4_intergenic_Lrpap1|Adra2c_chr5_35198749 |
CATTTGCCTTCCCATGTGGCAGTGACCTGGGGCCTCCTGAACACTTGGTGTCTTCTCCTAGGAAGGGCTTGGTGCCCAGA GAAGGTTTGAGGGCAGAGGGGACTGGGTGGCCTTGGCTCCTCCTTCCCTTCCCTCCTCTG |
| mm4_intron_Gnao1_chr8_93821532 |
GATGAGGGAAGGAGCAGAGCACCCTGTCCCCCACCGACCCCCAGTTCCCTACGATGCACAGCTTGTGCTGGACGGGGCCA CACCATGCTTCCTGCTTCTGATGGGACCTC |
| mm4_intron_Pdia5_chr16_35401466 |
TACTCACAGCCTGTAGCCCTTCTCCACCAGCGAGCGAGCGTGTCAACTGATAAAAGTCCCCAGCTAAGCTCCTGGGAGGG GATTTGGGCTCCCTGGCTAAAACATGAGCTGCCTCACACA |
| mm4_intron_Fcrla_chr1_170922172 |
GCCTTCGTGATTGACCCAGAGTCGAGAGAATAACTCTAGGGCATTTTTTTCTCCTGGGAGTTAAGGATGGGGAACGTCTA CCTATGCCAGTTCCCTGAGTGGACTGGGGCTACCAGGAGTGGTTTGAGGCACTGGGATC |
| mm4_intron_F2r_chr13_95605704 |
TGCAGAGGCCCTCAATTACCTCCTCACACGGCCTGGAAGCCCCGATCCCCTCCGTCAGCATCTTGCCTCCTTGCCCCTCT AGCATCAG |
| mm4_intron_Cadps_chr14_12729888 | CTGCAACCTTAGACCCCTGGGTGGAAGGGACTGGGGCTTCCTGGGGTTCCTGGTCAGCCAGTCTAGACCA |
| mm4_intergenic_Tshz2/Gm26883|Gm26883_chr2_169687411 |
TGAGAACAGACAAGGAGGCATAGAGAATTCCTGGGAGCCCCTTTCCCCTCCTCCTTAGTAGCTTTTCCCAGCTCCCTGCC TTCCAGGAGGCTCCCAGCACAGCACTTGAAAGCAGGGT |
| mm4_intergenic_Scgb1c1|Odf3_chr7_140847606 |
TGCTGGAGATGTGCATAGCCCCTAAAGGAGAAGTCCACGGAGAGGATGGGGGCTCCCTGGAGAGGGTTAGTTCCCCCCAA AAACAGGATCTCTGGAAAAGGTAATGTCTGAAGAGAGGCCTTGGGCCAGAGGTCATTGTC |
| mm4_intergenic_Hs1bp3|Rhob_chr12_8453575 |
GTGGGTGGCGGTTGATAGAAGATGGCCAAGGCTGGTGGCAGCAGGCAGTGTACAATGGATGAGTCCACGGTGGGGACTGA GCCTCCCAGGCCTGACTTCAGAACAGCCCTGGCCAGGAACCAGGTACTCTTTCCAGCCC |
| mm4_intergenic_Fbxo2|Ptchd2_chr4_148184788 |
CTAGAATTCCCCGGCACAGGGGACCTTGCCTGCCAGCCTCCACCTTCCCCAGTCTGAGGGAGTTTGGTGGCCCTACAGAG GGGAGGGGGGCTCCCTGGCTGTGTGGTGCTGGCATCAGAGCAGTTCCT |
| mm4_intergenic_Cd209a|Gm24934_chr8_3754069 |
CTGTCCCTCATGCTGGACTGCCTCTTCCCTGGGAGCCTCATTCCCCTCAGGTATATCGTGAGACTTTCCCTGTCAGTTTT GGCCCTGATGCAGTG |
| mm4_intergenic_Bahcc1|Actg1_chr11_120336664 |
CAGGGAGTTCTGAACCACCCTTCCACGCCCTGGGAGCCCCAGGACCCTCCACACCACTCATCCATCCTCCATGGGACATA GAGGCTCTGACCTCTCTTTGGGTTGGTCCTGTTGCCCAAGTTCTGAGATGTCCCTGGGC |
| mm4_intergenic_4930569F06Rik|Suds3_chr5_117068470 | AAACATCCTGAGGGAGGGGAGCGGAGGGGGATGGGGCTCACTGGGCAGCCAGTCCAGCAGAAA |
| mm4_exon_Slc25a42_chr8_70184643 |
TACATGGTGCAACCTGCTGAGGTGACCCAGGAGCCTCAGTCACCTCCGGCCTCCTGGTAAGGGATGCCTAGACTCTCCAT CCCAGGTGGGGAAGGGAGTGGCAGTACAC |
| mm4_exon_Scand1/Cnbd2_chr2_156311895 |
AACTCAGGGGTAGGGTGTCAGTCCAGGGAGCCCCAGGCTCCGCCGCTCAGCCGGTGATGCGCACGTNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNTCCGGTAGAATGGCCTGCAGCTG |
| mm4_exon_Macf1_chr4_123527047 |
AGCAGGTGAGCAATGACTGTCATACCCTCTTCCAGGGAATCCCAGGCCCCTCCAACAACTGATGACTCATTCTCCAACAA AAGGTGAGCAGTCTGGATCTCT |
| mm3_exon_Celf3_chr3_94485573 |
AGCCATCAACACCCTTCACAGCAGCCGGACCCTACCGGTGAGCCCCAGTCCCCTCCTTCCTTGTCTCTCTCTCCCACTGG CACACTTG |