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Contents:In the table below, Illumina Nextera Handle sequences have been added and highlighted in bold. Primers for the on-target have been added for convenience. The table below is sorted by the CFD off-target score. Sites with very low CFD scores < 0.02 are unlikely to be cleaved, see our study Haeussler et al. 2016, Figure 2.
In the protocol by Matthew Canver, Harvard, two PCRs are run: one PCR to amplify the potential off-target, then a second PCR to extend the handles with Illumina barcodes. Please click here to download the protocol. Alternatively, you can have a look at Fu et al, 2014.
If a primer was not found, the reason is usually that the region around the off-target is too repetitive. To avoid unspecific primers, all repeats are masked for the primer design (not for off-target search). If you think that we should change the parameters here or should use different primer3 settings, please let us know.
| Name | Primer Sequence | Tm | CFD Score |
|---|---|---|---|
| ontarget_mm0_exon_5730457N03Rik/Evx1_chr6_52314013_F | TCGTCGGCAGCGTCAACCGCCAGAGAAGATGGTG | 60.0 | 1.00 |
| ontarget_mm0_exon_5730457N03Rik/Evx1_chr6_52314013_R | GTCTCGTGGGCTCGGCTGCCTGCTAGTCCATCGAC | 60.2 | 1.00 |
| mm4_intron_Fam186b_chr15_99285113_F | TCGTCGGCAGCGTCCCTGGCCTCTTCCTGTTCTC | 59.7 | 0.66 |
| mm4_intron_Fam186b_chr15_99285113_R | GTCTCGTGGGCTCGGCAGTGGTGATCTCTTGGCCC | 60.3 | 0.66 |
| mm4_exon_Garnl3_chr2_33009781_F | Primer3: not found at this Tm | N.d. | 0.57 |
| mm4_exon_Garnl3_chr2_33009781_R | Primer3: not found at this Tm | N.d. | 0.57 |
| mm3_intergenic_Tenm4|Gm15414_chr7_96559034_F | TCGTCGGCAGCGTCGGGTATCTCCAGGGCATGTG | 59.8 | 0.51 |
| mm3_intergenic_Tenm4|Gm15414_chr7_96559034_R | GTCTCGTGGGCTCGGACATTTCGAGCTTCCTGACAGT | 59.9 | 0.51 |
| mm2_intergenic_Mpp5|Gm25225_chr12_78749158_F | Primer3: not found at this Tm | N.d. | 0.46 |
| mm2_intergenic_Mpp5|Gm25225_chr12_78749158_R | Primer3: not found at this Tm | N.d. | 0.46 |
| mm4_intergenic_Ddah1|Bcl10_chr3_145902271_F | Primer3: not found at this Tm | N.d. | 0.43 |
| mm4_intergenic_Ddah1|Bcl10_chr3_145902271_R | Primer3: not found at this Tm | N.d. | 0.43 |
| mm2_exon_Clu_chr14_65974704_F | TCGTCGGCAGCGTCTGGACAGGGAAGCTTAGGGA | 59.8 | 0.39 |
| mm2_exon_Clu_chr14_65974704_R | GTCTCGTGGGCTCGGCGCTCTAGCCCTTCTGTTGG | 60.4 | 0.39 |
| mm4_intron_Mat2b_chr11_40692368_F | TCGTCGGCAGCGTCGACTACTGAAACGGGAGCCA | 59.3 | 0.36 |
| mm4_intron_Mat2b_chr11_40692368_R | GTCTCGTGGGCTCGGGTGGCGCCTTTGAGTTTGTT | 59.8 | 0.36 |
| mm4_intergenic_Uncx|Micall2_chr5_139613841_F | TCGTCGGCAGCGTCCCATGTCTGTCTGGCACCTG | 60.6 | 0.33 |
| mm4_intergenic_Uncx|Micall2_chr5_139613841_R | GTCTCGTGGGCTCGGCAAACCCCTCTTAGCAGGCA | 59.9 | 0.33 |
| mm4_intron_1700041M05Rik_chr4_125236423_F | Primer3: not found at this Tm | N.d. | 0.33 |
| mm4_intron_1700041M05Rik_chr4_125236423_R | Primer3: not found at this Tm | N.d. | 0.33 |
| mm4_intergenic_Gsta4|Gsta1_chr9_78228766_F | Primer3: not found at this Tm | N.d. | 0.31 |
| mm4_intergenic_Gsta4|Gsta1_chr9_78228766_R | Primer3: not found at this Tm | N.d. | 0.31 |
| mm4_intron_Arid3a_chr10_79932978_F | Primer3: not found at this Tm | N.d. | 0.31 |
| mm4_intron_Arid3a_chr10_79932978_R | Primer3: not found at this Tm | N.d. | 0.31 |
| mm4_intergenic_Rbfox3|Gm11750_chr11_118767281_F | Primer3: not found at this Tm | N.d. | 0.29 |
| mm4_intergenic_Rbfox3|Gm11750_chr11_118767281_R | Primer3: not found at this Tm | N.d. | 0.29 |
| mm4_intron_Tjp1_chr7_65370531_F | TCGTCGGCAGCGTCGGTACCAACCACTCCTCCAG | 59.3 | 0.27 |
| mm4_intron_Tjp1_chr7_65370531_R | GTCTCGTGGGCTCGGCCCCGGGTGAGGATTCTCA | 60.6 | 0.27 |
| mm4_intergenic_Rnf214|Rnf214/Pcsk7_chr9_45906297_F | Primer3: not found at this Tm | N.d. | 0.26 |
| mm4_intergenic_Rnf214|Rnf214/Pcsk7_chr9_45906297_R | Primer3: not found at this Tm | N.d. | 0.26 |
| mm4_intron_Cux2_chr5_122030644_F | TCGTCGGCAGCGTCCTCCGTGAAGGCAGACAGC | 60.7 | 0.26 |
| mm4_intron_Cux2_chr5_122030644_R | GTCTCGTGGGCTCGGTTGCATCTCCTCACTGCGAG | 60.1 | 0.26 |
| mm4_exon_Hck_chr2_153136741_F | TCGTCGGCAGCGTCTTTCCCCAGCCACCTACAAC | 59.8 | 0.25 |
| mm4_exon_Hck_chr2_153136741_R | GTCTCGTGGGCTCGGCATGCTGCAGCGACTTCATC | 59.9 | 0.25 |
| mm3_intron_Impdh1_chr6_29215976_F | TCGTCGGCAGCGTCGCAATGGCAGTAGAGGGGAC | 60.4 | 0.25 |
| mm3_intron_Impdh1_chr6_29215976_R | GTCTCGTGGGCTCGGTACGAGCCGGAGAGGTGAC | 60.7 | 0.25 |
| mm4_intergenic_Gm13076|Fam131c_chr4_141368095_F | Primer3: not found at this Tm | N.d. | 0.23 |
| mm4_intergenic_Gm13076|Fam131c_chr4_141368095_R | Primer3: not found at this Tm | N.d. | 0.23 |
| mm4_intergenic_Cxxc5|Gm23882_chr18_35868748_F | Primer3: not found at this Tm | N.d. | 0.22 |
| mm4_intergenic_Cxxc5|Gm23882_chr18_35868748_R | Primer3: not found at this Tm | N.d. | 0.22 |
| mm4_intergenic_Gm7784|B3gat2_chr1_23524619_F | Primer3: not found at this Tm | N.d. | 0.21 |
| mm4_intergenic_Gm7784|B3gat2_chr1_23524619_R | Primer3: not found at this Tm | N.d. | 0.21 |
| mm4_intergenic_Crbn|Gm22418_chr6_106800121_F | Primer3: not found at this Tm | N.d. | 0.21 |
| mm4_intergenic_Crbn|Gm22418_chr6_106800121_R | Primer3: not found at this Tm | N.d. | 0.21 |
| mm3_intergenic_Rpl30-ps9|Gm14824_chrX_105320445_F | Primer3: not found at this Tm | N.d. | 0.20 |
| mm3_intergenic_Rpl30-ps9|Gm14824_chrX_105320445_R | Primer3: not found at this Tm | N.d. | 0.20 |
| mm4_intergenic_Gm11468|Gm14268_chr2_166318552_F | TCGTCGGCAGCGTCTCAGGTTCGGAAAGACCACG | 59.9 | 0.19 |
| mm4_intergenic_Gm11468|Gm14268_chr2_166318552_R | GTCTCGTGGGCTCGGTGTGAGCCTGGAGGACTACA | 59.8 | 0.19 |
| mm4_intron_4932414N04Rik_chr2_68657752_F | Primer3: not found at this Tm | N.d. | 0.19 |
| mm4_intron_4932414N04Rik_chr2_68657752_R | Primer3: not found at this Tm | N.d. | 0.19 |
| mm4_intron_Ahdc1_chr4_133016462_F | TCGTCGGCAGCGTCGTCAGGCTTCCAAGAGCTGA | 59.6 | 0.18 |
| mm4_intron_Ahdc1_chr4_133016462_R | GTCTCGTGGGCTCGGCTGGCTGGGCTCTTTCTCTC | 60.1 | 0.18 |
| mm4_exon_Slc16a2_chrX_103707915_F | TCGTCGGCAGCGTCACTGAACCAGAAAGCGCTGT | 60.1 | 0.18 |
| mm4_exon_Slc16a2_chrX_103707915_R | GTCTCGTGGGCTCGGTGTCCTTACGCTGCTCTCAC | 59.7 | 0.18 |
| mm4_intergenic_Fam46a|Gm25125_chr9_85469361_F | TCGTCGGCAGCGTCCATCCCCTAGCACACAGAGG | 59.5 | 0.18 |
| mm4_intergenic_Fam46a|Gm25125_chr9_85469361_R | GTCTCGTGGGCTCGGGGAGCGGCTTTTCTGTAGGA | 59.7 | 0.18 |
| mm4_intron_Snrnp35_chr5_124485317_F | Primer3: not found at this Tm | N.d. | 0.17 |
| mm4_intron_Snrnp35_chr5_124485317_R | Primer3: not found at this Tm | N.d. | 0.17 |
| mm4_intron_Rem2_chr14_54476545_F | TCGTCGGCAGCGTCGGAGACCCCTGCACTTTTGA | 59.8 | 0.17 |
| mm4_intron_Rem2_chr14_54476545_R | GTCTCGTGGGCTCGGTTAACCTAGGGGCCAAGTGC | 59.6 | 0.17 |
| mm4_intron_Zcchc11_chr4_108459714_F | TCGTCGGCAGCGTCACCTCCATCCCCTCCTCATT | 59.6 | 0.17 |
| mm4_intron_Zcchc11_chr4_108459714_R | GTCTCGTGGGCTCGGCCAAGCACCCGTCAAACCTC | 61.5 | 0.17 |
| mm4_intergenic_Lrrc55|Gm13713_chr2_85163729_F | TCGTCGGCAGCGTCGGGATGGGCAATGTGGAGAA | 60.0 | 0.16 |
| mm4_intergenic_Lrrc55|Gm13713_chr2_85163729_R | GTCTCGTGGGCTCGGCTGTCCCAGTAGCTAGGGGT | 60.0 | 0.16 |
| mm4_intron_Scaf8_chr17_3115619_F | TCGTCGGCAGCGTCAGGGCTGAGGGAAGGCAG | 61.0 | 0.16 |
| mm4_intron_Scaf8_chr17_3115619_R | GTCTCGTGGGCTCGGGGGTGGGAGGTGATAGTCCT | 60.0 | 0.16 |
| mm4_intergenic_Edil3|Gm26120_chr13_89364374_F | Primer3: not found at this Tm | N.d. | 0.16 |
| mm4_intergenic_Edil3|Gm26120_chr13_89364374_R | Primer3: not found at this Tm | N.d. | 0.16 |
| mm4_intron_Ccnb3_chrX_7029243_F | Primer3: not found at this Tm | N.d. | 0.16 |
| mm4_intron_Ccnb3_chrX_7029243_R | Primer3: not found at this Tm | N.d. | 0.16 |
| mm4_exon_Eml6_chr11_30025950_F | Primer3: not found at this Tm | N.d. | 0.16 |
| mm4_exon_Eml6_chr11_30025950_R | Primer3: not found at this Tm | N.d. | 0.16 |
| mm3_intergenic_4933402N22Rik|Sema3d_chr5_12240208_F | Primer3: not found at this Tm | N.d. | 0.16 |
| mm3_intergenic_4933402N22Rik|Sema3d_chr5_12240208_R | Primer3: not found at this Tm | N.d. | 0.16 |
| mm4_intergenic_Gm23534|Gm22727_chr1_137671266_F | TCGTCGGCAGCGTCTGGATGGGTACGCATTGCTT | 60.0 | 0.16 |
| mm4_intergenic_Gm23534|Gm22727_chr1_137671266_R | GTCTCGTGGGCTCGGTCCCCAGAGAACGAACTGAA | 58.2 | 0.16 |
| mm4_intergenic_Rpl36a-ps1|Mzt1_chr14_99012509_F | Primer3: not found at this Tm | N.d. | 0.15 |
| mm4_intergenic_Rpl36a-ps1|Mzt1_chr14_99012509_R | Primer3: not found at this Tm | N.d. | 0.15 |
| mm4_intergenic_Gm25180|Agap1_chr1_89580138_F | Primer3: not found at this Tm | N.d. | 0.15 |
| mm4_intergenic_Gm25180|Agap1_chr1_89580138_R | Primer3: not found at this Tm | N.d. | 0.15 |
| mm4_intron_Plekhm1_chr11_103408490_F | Primer3: not found at this Tm | N.d. | 0.15 |
| mm4_intron_Plekhm1_chr11_103408490_R | Primer3: not found at this Tm | N.d. | 0.15 |
| mm4_intergenic_2700089E24Rik|Gm23403_chr6_133149131_F | Primer3: not found at this Tm | N.d. | 0.15 |
| mm4_intergenic_2700089E24Rik|Gm23403_chr6_133149131_R | Primer3: not found at this Tm | N.d. | 0.15 |
| mm4_intron_Ubqln4_chr3_88554084_F | Primer3: not found at this Tm | N.d. | 0.15 |
| mm4_intron_Ubqln4_chr3_88554084_R | Primer3: not found at this Tm | N.d. | 0.15 |
| mm4_intergenic_Tmem59l|Crlf1_chr8_70487821_F | Primer3: not found at this Tm | N.d. | 0.14 |
| mm4_intergenic_Tmem59l|Crlf1_chr8_70487821_R | Primer3: not found at this Tm | N.d. | 0.14 |
| mm4_intergenic_Gdap1|Gm25166_chr1_17504425_F | Primer3: not found at this Tm | N.d. | 0.14 |
| mm4_intergenic_Gdap1|Gm25166_chr1_17504425_R | Primer3: not found at this Tm | N.d. | 0.14 |
| mm4_intergenic_Gm12123|Gm12122_chr11_35343548_F | Primer3: not found at this Tm | N.d. | 0.14 |
| mm4_intergenic_Gm12123|Gm12122_chr11_35343548_R | Primer3: not found at this Tm | N.d. | 0.14 |
| mm4_intergenic_Gm23221|Paqr5_chr9_62022186_F | Primer3: not found at this Tm | N.d. | 0.14 |
| mm4_intergenic_Gm23221|Paqr5_chr9_62022186_R | Primer3: not found at this Tm | N.d. | 0.14 |
| mm4_intergenic_Gap|Zfy1_chrY_671347_F | Primer3: not found at this Tm | N.d. | 0.14 |
| mm4_intergenic_Gap|Zfy1_chrY_671347_R | Primer3: not found at this Tm | N.d. | 0.14 |
| mm4_intron_Il34_chr8_110747165_F | Primer3: not found at this Tm | N.d. | 0.14 |
| mm4_intron_Il34_chr8_110747165_R | Primer3: not found at this Tm | N.d. | 0.14 |
| mm4_intergenic_St6galnac5|St6galnac3_chr3_153064142_F | TCGTCGGCAGCGTCCACCTGGACACTACAGCACG | 60.6 | 0.13 |
| mm4_intergenic_St6galnac5|St6galnac3_chr3_153064142_R | GTCTCGTGGGCTCGGAGCAGGGGAAGACAGTCTGA | 60.1 | 0.13 |
| mm4_exon_Cecr6_chr6_120493461_F | Primer3: not found at this Tm | N.d. | 0.13 |
| mm4_exon_Cecr6_chr6_120493461_R | Primer3: not found at this Tm | N.d. | 0.13 |
| mm4_intron_Nub1_chr5_24686061_F | Primer3: not found at this Tm | N.d. | 0.13 |
| mm4_intron_Nub1_chr5_24686061_R | Primer3: not found at this Tm | N.d. | 0.13 |
| mm4_intron_Zmat4_chr8_23915657_F | Primer3: not found at this Tm | N.d. | 0.13 |
| mm4_intron_Zmat4_chr8_23915657_R | Primer3: not found at this Tm | N.d. | 0.13 |
| mm4_intergenic_Gm24121|Ugt2b35_chr5_86953788_F | Primer3: not found at this Tm | N.d. | 0.13 |
| mm4_intergenic_Gm24121|Ugt2b35_chr5_86953788_R | Primer3: not found at this Tm | N.d. | 0.13 |
| mm4_intergenic_Gm6317|Gm25383_chr13_78886693_F | Primer3: not found at this Tm | N.d. | 0.13 |
| mm4_intergenic_Gm6317|Gm25383_chr13_78886693_R | Primer3: not found at this Tm | N.d. | 0.13 |
| mm2_intergenic_Olfm1|Gm13373_chr2_28290288_F | TCGTCGGCAGCGTCATGCACCTGCTTAATGCCCT | 60.0 | 0.13 |
| mm2_intergenic_Olfm1|Gm13373_chr2_28290288_R | GTCTCGTGGGCTCGGAAAGACATGCAGGGCTCAGG | 60.3 | 0.13 |
| mm4_intergenic_Gm5083|Gm27007_chr13_44374757_F | TCGTCGGCAGCGTCAGTGCACAACTCCAAGTGGG | 60.4 | 0.13 |
| mm4_intergenic_Gm5083|Gm27007_chr13_44374757_R | GTCTCGTGGGCTCGGATGACTTCACAGGGTGGCAG | 59.9 | 0.13 |
| mm3_intron_Tspan4_chr7_141482178_F | Primer3: not found at this Tm | N.d. | 0.13 |
| mm3_intron_Tspan4_chr7_141482178_R | Primer3: not found at this Tm | N.d. | 0.13 |
| mm4_intron_Nav2_chr7_49196178_F | Primer3: not found at this Tm | N.d. | 0.13 |
| mm4_intron_Nav2_chr7_49196178_R | Primer3: not found at this Tm | N.d. | 0.13 |
| mm4_exon_Cnnm1_chr19_43440894_F | TCGTCGGCAGCGTCGACGTGGAGGTCCTGGGG | 61.3 | 0.12 |
| mm4_exon_Cnnm1_chr19_43440894_R | GTCTCGTGGGCTCGGCACCCGCACCTGGACCAG | 62.7 | 0.12 |
| mm4_intron_Eif4enif1_chr11_3227569_F | TCGTCGGCAGCGTCTGGCAGGTAAGATGACTTCACA | 59.3 | 0.12 |
| mm4_intron_Eif4enif1_chr11_3227569_R | GTCTCGTGGGCTCGGGAAAACTTCCCTTCCACAGCA | 58.6 | 0.12 |
| mm3_intergenic_Capn8|4922505E12Rik_chr1_182674839_F | Primer3: not found at this Tm | N.d. | 0.12 |
| mm3_intergenic_Capn8|4922505E12Rik_chr1_182674839_R | Primer3: not found at this Tm | N.d. | 0.12 |
| mm4_intergenic_Cyth1|Gm24060_chr11_118177370_F | Primer3: not found at this Tm | N.d. | 0.12 |
| mm4_intergenic_Cyth1|Gm24060_chr11_118177370_R | Primer3: not found at this Tm | N.d. | 0.12 |
| mm4_intron_Afap1l2_chr19_57006846_F | TCGTCGGCAGCGTCCGACCTTGGAAGTCGGGATT | 59.7 | 0.12 |
| mm4_intron_Afap1l2_chr19_57006846_R | GTCTCGTGGGCTCGGCTTGGTAGAAGAGAGGCGGC | 60.1 | 0.12 |
| mm4_intron_Tmod2_chr9_75601800_F | TCGTCGGCAGCGTCTCAACACGCAACAGGATCCT | 59.6 | 0.11 |
| mm4_intron_Tmod2_chr9_75601800_R | GTCTCGTGGGCTCGGTCGCTGTCACTCCCAGTTTC | 59.9 | 0.11 |
| mm4_intergenic_Bnip1|Nkx2-5_chr17_26828086_F | TCGTCGGCAGCGTCGGGCTCAGAGGCTAATTGCT | 59.8 | 0.11 |
| mm4_intergenic_Bnip1|Nkx2-5_chr17_26828086_R | GTCTCGTGGGCTCGGAGGCTGTGGGCTGAAATCAA | 59.8 | 0.11 |
| mm3_intron_Fblim1_chr4_141599204_F | TCGTCGGCAGCGTCTCCTCAGGCTACCGGTCTTT | 60.2 | 0.11 |
| mm3_intron_Fblim1_chr4_141599204_R | GTCTCGTGGGCTCGGCTGGGGCTGAACGACCAG | 60.0 | 0.11 |
| mm4_intron_Uggt2_chr14_119071436_F | Primer3: not found at this Tm | N.d. | 0.11 |
| mm4_intron_Uggt2_chr14_119071436_R | Primer3: not found at this Tm | N.d. | 0.11 |
| mm4_intron_Caln1_chr5_130618015_F | TCGTCGGCAGCGTCTGAGACCTGCTTAGCACTGC | 60.0 | 0.11 |
| mm4_intron_Caln1_chr5_130618015_R | GTCTCGTGGGCTCGGAGGGCTCTGAGTGTGAGACT | 59.8 | 0.11 |
| mm4_intron_Sez6_chr11_77960122_F | TCGTCGGCAGCGTCCCAGCAGAACACGATCAGGT | 60.0 | 0.11 |
| mm4_intron_Sez6_chr11_77960122_R | GTCTCGTGGGCTCGGCAGGTGGGTCTCTCAGAGTG | 59.1 | 0.11 |
| mm4_intron_Prpf18_chr2_4639984_F | TCGTCGGCAGCGTCATGCTGAGCAGAAGAGCCAG | 60.1 | 0.11 |
| mm4_intron_Prpf18_chr2_4639984_R | GTCTCGTGGGCTCGGGCTCCTTAGCTCCTTGGATTT | 57.7 | 0.11 |
| mm4_intron_Prpf18_chr2_4639949_F | Primer3: not found at this Tm | N.d. | 0.11 |
| mm4_intron_Prpf18_chr2_4639949_R | Primer3: not found at this Tm | N.d. | 0.11 |
| mm4_intron_Prpf18_chr2_4639914_F | Primer3: not found at this Tm | N.d. | 0.11 |
| mm4_intron_Prpf18_chr2_4639914_R | Primer3: not found at this Tm | N.d. | 0.11 |
| mm4_intergenic_Oacyl|Sec11c_chr18_65781998_F | Primer3: not found at this Tm | N.d. | 0.11 |
| mm4_intergenic_Oacyl|Sec11c_chr18_65781998_R | Primer3: not found at this Tm | N.d. | 0.11 |
| mm4_intergenic_Erg|Ets2_chr16_95617123_F | Primer3: not found at this Tm | N.d. | 0.10 |
| mm4_intergenic_Erg|Ets2_chr16_95617123_R | Primer3: not found at this Tm | N.d. | 0.10 |
| mm4_intron_Ctdsp2_chr10_126979703_F | TCGTCGGCAGCGTCCCGGAGTTTTCACGCAGGA | 60.3 | 0.10 |
| mm4_intron_Ctdsp2_chr10_126979703_R | GTCTCGTGGGCTCGGGTGAACTTCGTCCCGAGTCC | 60.3 | 0.10 |
| mm4_intergenic_Wnt4|Cdc42_chr4_137315009_F | TCGTCGGCAGCGTCTTCAGTCATTACACGCCCCG | 60.3 | 0.10 |
| mm4_intergenic_Wnt4|Cdc42_chr4_137315009_R | GTCTCGTGGGCTCGGAGTTAGCAAGGCCATGTTGGT | 60.2 | 0.10 |
| mm4_intergenic_Mgat4a|2010300C02Rik_chr1_37603328_F | Primer3: not found at this Tm | N.d. | 0.10 |
| mm4_intergenic_Mgat4a|2010300C02Rik_chr1_37603328_R | Primer3: not found at this Tm | N.d. | 0.10 |
| mm4_exon_Cadm1_chr9_47530200_F | Primer3: not found at this Tm | N.d. | 0.09 |
| mm4_exon_Cadm1_chr9_47530200_R | Primer3: not found at this Tm | N.d. | 0.09 |
| mm4_exon_Usp49/Gm20517_chr17_47672699_F | TCGTCGGCAGCGTCCTGGAGGAGCTGGCCAGT | 61.0 | 0.09 |
| mm4_exon_Usp49/Gm20517_chr17_47672699_R | GTCTCGTGGGCTCGGGAGGTAGCGAGGGTGGCA | 61.0 | 0.09 |
| mm4_exon_Ephb4_chr5_137372201_F | TCGTCGGCAGCGTCGTCAGCGCTCTGGACAAGAT | 60.1 | 0.09 |
| mm4_exon_Ephb4_chr5_137372201_R | GTCTCGTGGGCTCGGGGACTCTTGGGTTGTGGGTC | 60.2 | 0.09 |
| mm4_intron_B230219D22Rik_chr13_55693576_F | TCGTCGGCAGCGTCAGTCTCGCCCTGGAGCTG | 61.0 | 0.09 |
| mm4_intron_B230219D22Rik_chr13_55693576_R | GTCTCGTGGGCTCGGTCTTCTCTGCGCTCCTTAGC | 59.5 | 0.09 |
| mm3_intron_Stk10_chr11_32604331_F | Primer3: not found at this Tm | N.d. | 0.09 |
| mm3_intron_Stk10_chr11_32604331_R | Primer3: not found at this Tm | N.d. | 0.09 |
| mm4_intergenic_Gm22649|Usp29_chr7_6953311_F | Primer3: not found at this Tm | N.d. | 0.09 |
| mm4_intergenic_Gm22649|Usp29_chr7_6953311_R | Primer3: not found at this Tm | N.d. | 0.09 |
| mm4_intergenic_Taf1b|Grhl1_chr12_24566625_F | TCGTCGGCAGCGTCGTTGCTCACAGGGGACTCAA | 59.8 | 0.09 |
| mm4_intergenic_Taf1b|Grhl1_chr12_24566625_R | GTCTCGTGGGCTCGGGCCAGCCAGAGATGAAGGAC | 60.4 | 0.09 |
| mm4_exon_B4galt7_chr13_55600044_F | Primer3: not found at this Tm | N.d. | 0.09 |
| mm4_exon_B4galt7_chr13_55600044_R | Primer3: not found at this Tm | N.d. | 0.09 |
| mm4_intron_Lrrc41_chr4_116075661_F | TCGTCGGCAGCGTCGGGGTAAGTCGCGGAGTG | 59.8 | 0.09 |
| mm4_intron_Lrrc41_chr4_116075661_R | GTCTCGTGGGCTCGGGACTCCACCATCGAACTCCC | 59.8 | 0.09 |
| mm4_intron_Atg5_chr10_44268681_F | Primer3: not found at this Tm | N.d. | 0.09 |
| mm4_intron_Atg5_chr10_44268681_R | Primer3: not found at this Tm | N.d. | 0.09 |
| mm3_intron_Poteg_chr8_27475538_F | Primer3: not found at this Tm | N.d. | 0.09 |
| mm3_intron_Poteg_chr8_27475538_R | Primer3: not found at this Tm | N.d. | 0.09 |
| mm4_intergenic_Ddx18|Gm15394_chr1_121766280_F | Primer3: not found at this Tm | N.d. | 0.09 |
| mm4_intergenic_Ddx18|Gm15394_chr1_121766280_R | Primer3: not found at this Tm | N.d. | 0.09 |
| mm4_intron_Fosl2_chr5_32152046_F | TCGTCGGCAGCGTCACAAGTCAGGTGCTGTCTGT | 59.1 | 0.08 |
| mm4_intron_Fosl2_chr5_32152046_R | GTCTCGTGGGCTCGGTTACCATCTCAGCCCACCAG | 59.0 | 0.08 |
| mm4_intron_Ndrg2_chr14_51911843_F | TCGTCGGCAGCGTCCCAAGACACACGGAGAGCTT | 59.9 | 0.08 |
| mm4_intron_Ndrg2_chr14_51911843_R | GTCTCGTGGGCTCGGCGAGGTGAGAATGTTGGGGT | 59.6 | 0.08 |
| mm4_intergenic_Gm24341|Cnr1_chr4_33713648_F | Primer3: not found at this Tm | N.d. | 0.08 |
| mm4_intergenic_Gm24341|Cnr1_chr4_33713648_R | Primer3: not found at this Tm | N.d. | 0.08 |
| mm4_intergenic_Rab27b|Dynap_chr18_70172438_F | Primer3: not found at this Tm | N.d. | 0.08 |
| mm4_intergenic_Rab27b|Dynap_chr18_70172438_R | Primer3: not found at this Tm | N.d. | 0.08 |
| mm4_intron_Igf2bp3_chr6_49117016_F | TCGTCGGCAGCGTCTGTGAGACCAACAACGCATG | 59.0 | 0.08 |
| mm4_intron_Igf2bp3_chr6_49117016_R | GTCTCGTGGGCTCGGTCAGGGTTGGATGCAGGAAC | 59.9 | 0.08 |
| mm4_intron_Glipr2_chr4_43972426_F | TCGTCGGCAGCGTCCCTTAGGTGCAGATCTGGGAC | 59.8 | 0.08 |
| mm4_intron_Glipr2_chr4_43972426_R | GTCTCGTGGGCTCGGTTGCCATCTGAAGCTCAGGC | 60.6 | 0.08 |
| mm4_intergenic_Gm15219|Cdkn3_chr14_46579158_F | Primer3: not found at this Tm | N.d. | 0.08 |
| mm4_intergenic_Gm15219|Cdkn3_chr14_46579158_R | Primer3: not found at this Tm | N.d. | 0.08 |
| mm3_intergenic_Gm15998|Efna3_chr3_89320929_F | TCGTCGGCAGCGTCTCTCACGATTTATGGGGCCG | 59.8 | 0.08 |
| mm3_intergenic_Gm15998|Efna3_chr3_89320929_R | GTCTCGTGGGCTCGGACCGACGGAGGTAGGAGG | 59.7 | 0.08 |
| mm4_intron_Pard3_chr8_127274990_F | Primer3: not found at this Tm | N.d. | 0.08 |
| mm4_intron_Pard3_chr8_127274990_R | Primer3: not found at this Tm | N.d. | 0.08 |
| mm4_exon_Tmem82_chr4_141618102_F | TCGTCGGCAGCGTCGGGAGGGACTAGGAAAGGGT | 59.9 | 0.08 |
| mm4_exon_Tmem82_chr4_141618102_R | GTCTCGTGGGCTCGGAGTGCCACTGAATCCAGCAA | 59.8 | 0.08 |
| mm4_exon_Anpep_chr7_79842096_F | TCGTCGGCAGCGTCCATCTACAGCAGGGGTGGTG | 60.1 | 0.08 |
| mm4_exon_Anpep_chr7_79842096_R | GTCTCGTGGGCTCGGGGCAGCTGTGTGTACCATCA | 60.3 | 0.08 |
| mm4_intergenic_Gm24338|Ppp2r3a_chr9_101251415_F | TCGTCGGCAGCGTCTCCTGTTAACGAGTTCCCGG | 59.3 | 0.08 |
| mm4_intergenic_Gm24338|Ppp2r3a_chr9_101251415_R | GTCTCGTGGGCTCGGCCACGCCAGAGGACTCCC | 61.7 | 0.08 |
| mm4_intergenic_Hdac5/mmu-mir-8101|BC030867_chr11_102248443_F | Primer3: not found at this Tm | N.d. | 0.08 |
| mm4_intergenic_Hdac5/mmu-mir-8101|BC030867_chr11_102248443_R | Primer3: not found at this Tm | N.d. | 0.08 |
| mm4_intergenic_Gm21614|Gm23249_chr12_93648223_F | Primer3: not found at this Tm | N.d. | 0.08 |
| mm4_intergenic_Gm21614|Gm23249_chr12_93648223_R | Primer3: not found at this Tm | N.d. | 0.08 |
| mm4_intergenic_Gm12580|Olfr267_chr4_58666345_F | Primer3: not found at this Tm | N.d. | 0.08 |
| mm4_intergenic_Gm12580|Olfr267_chr4_58666345_R | Primer3: not found at this Tm | N.d. | 0.08 |
| mm4_intergenic_Ccne1|Gm22203_chr7_38128470_F | TCGTCGGCAGCGTCTAGTCATAGGCCTGGGAGCT | 59.4 | 0.08 |
| mm4_intergenic_Ccne1|Gm22203_chr7_38128470_R | GTCTCGTGGGCTCGGCTGGCCTCTACACACTCACG | 60.1 | 0.08 |
| mm4_exon_Gm4980/Gm10605_chr7_99626955_F | Primer3: not found at this Tm | N.d. | 0.07 |
| mm4_exon_Gm4980/Gm10605_chr7_99626955_R | Primer3: not found at this Tm | N.d. | 0.07 |
| mm4_intergenic_Gm26859|Syt7_chr19_10402886_F | Primer3: not found at this Tm | N.d. | 0.07 |
| mm4_intergenic_Gm26859|Syt7_chr19_10402886_R | Primer3: not found at this Tm | N.d. | 0.07 |
| mm4_intergenic_AC124326.1|Mir802_chr16_93087459_F | TCGTCGGCAGCGTCAGGCTACAATGTGGCGAGAG | 59.8 | 0.07 |
| mm4_intergenic_AC124326.1|Mir802_chr16_93087459_R | GTCTCGTGGGCTCGGTGTCCCAGTCTCCCTGTCTT | 59.8 | 0.07 |
| mm4_intergenic_Gm5356|Gm26331_chr8_89242210_F | TCGTCGGCAGCGTCGCAGTGGCTTTTGAACCGAG | 60.0 | 0.06 |
| mm4_intergenic_Gm5356|Gm26331_chr8_89242210_R | GTCTCGTGGGCTCGGGGTGTTCCCTGGCTAACTGG | 60.3 | 0.06 |
| mm4_intergenic_Gm12125|Tenm2_chr11_36002603_F | Primer3: not found at this Tm | N.d. | 0.06 |
| mm4_intergenic_Gm12125|Tenm2_chr11_36002603_R | Primer3: not found at this Tm | N.d. | 0.06 |
| mm4_intron_Nap1l4_chr7_143545155_F | Primer3: not found at this Tm | N.d. | 0.06 |
| mm4_intron_Nap1l4_chr7_143545155_R | Primer3: not found at this Tm | N.d. | 0.06 |
| mm4_exon_Phf1_chr17_26933422_F | TCGTCGGCAGCGTCCTTTGGCTGCTGCGTCATAC | 59.9 | 0.06 |
| mm4_exon_Phf1_chr17_26933422_R | GTCTCGTGGGCTCGGGGGAAGACTGAGTGTGAGCG | 60.3 | 0.06 |
| mm4_intergenic_Fnbp1l|Pde5a_chr3_122727713_F | Primer3: not found at this Tm | N.d. | 0.06 |
| mm4_intergenic_Fnbp1l|Pde5a_chr3_122727713_R | Primer3: not found at this Tm | N.d. | 0.06 |
| mm4_intergenic_Metap1|Eif4e_chr3_138489657_F | TCGTCGGCAGCGTCCTGACAGCCACGCCCTCTC | 62.6 | 0.06 |
| mm4_intergenic_Metap1|Eif4e_chr3_138489657_R | GTCTCGTGGGCTCGGGTGTAGGATCTCCGCTGACC | 59.6 | 0.06 |
| mm4_intron_Eif2ak3_chr6_70867917_F | Primer3: not found at this Tm | N.d. | 0.06 |
| mm4_intron_Eif2ak3_chr6_70867917_R | Primer3: not found at this Tm | N.d. | 0.06 |
| mm4_intergenic_Catsperb|Tc2n/Gm16285_chr12_101630320_F | Primer3: not found at this Tm | N.d. | 0.06 |
| mm4_intergenic_Catsperb|Tc2n/Gm16285_chr12_101630320_R | Primer3: not found at this Tm | N.d. | 0.06 |
| mm4_intergenic_A830012C17Rik|Gm11780_chr4_4252358_F | Primer3: not found at this Tm | N.d. | 0.06 |
| mm4_intergenic_A830012C17Rik|Gm11780_chr4_4252358_R | Primer3: not found at this Tm | N.d. | 0.06 |
| mm4_intergenic_Tnfrsf21|Gpr110_chr17_43264081_F | Primer3: not found at this Tm | N.d. | 0.06 |
| mm4_intergenic_Tnfrsf21|Gpr110_chr17_43264081_R | Primer3: not found at this Tm | N.d. | 0.06 |
| mm4_exon_Drap1_chr19_5424797_F | TCGTCGGCAGCGTCTTCTTGCTTGGCATCTCGGG | 60.6 | 0.06 |
| mm4_exon_Drap1_chr19_5424797_R | GTCTCGTGGGCTCGGGGAGTAAACGGCACCAGGAC | 60.6 | 0.06 |
| mm4_intron_Zcchc6_chr13_59780398_F | Primer3: not found at this Tm | N.d. | 0.06 |
| mm4_intron_Zcchc6_chr13_59780398_R | Primer3: not found at this Tm | N.d. | 0.06 |
| mm4_intergenic_Eya4|Rps12_chr10_23387942_F | Primer3: not found at this Tm | N.d. | 0.06 |
| mm4_intergenic_Eya4|Rps12_chr10_23387942_R | Primer3: not found at this Tm | N.d. | 0.06 |
| mm4_intron_Ccdc33_chr9_58113454_F | TCGTCGGCAGCGTCCCGTAGCAGGTGGAAGCTTT | 60.3 | 0.06 |
| mm4_intron_Ccdc33_chr9_58113454_R | GTCTCGTGGGCTCGGCTGCCCATTCACTCTCAGGG | 60.1 | 0.06 |
| mm4_intron_Clip1_chr5_123684060_F | Primer3: not found at this Tm | N.d. | 0.06 |
| mm4_intron_Clip1_chr5_123684060_R | Primer3: not found at this Tm | N.d. | 0.06 |
| mm4_intergenic_Gm23624|4930593C16Rik_chr9_120846292_F | TCGTCGGCAGCGTCATCCCAGATAGCCCAAGGGT | 60.0 | 0.06 |
| mm4_intergenic_Gm23624|4930593C16Rik_chr9_120846292_R | GTCTCGTGGGCTCGGTGGCCACAGTCCACACTATG | 59.6 | 0.06 |
| mm4_intergenic_Gm14236|Gm24327_chr2_168034059_F | TCGTCGGCAGCGTCGCTCCCTTTCGCTGTCCTT | 60.0 | 0.06 |
| mm4_intergenic_Gm14236|Gm24327_chr2_168034059_R | GTCTCGTGGGCTCGGAGCTTTCTGTAGGCTGCTGG | 60.0 | 0.06 |
| mm3_intron_Gm8091_chr5_100272309_F | Primer3: not found at this Tm | N.d. | 0.05 |
| mm3_intron_Gm8091_chr5_100272309_R | Primer3: not found at this Tm | N.d. | 0.05 |
| mm3_intergenic_Rragc|Gm12916_chr4_124291608_F | TCGTCGGCAGCGTCCCCCGTTGTCCTTGAGTGAG | 60.3 | 0.05 |
| mm3_intergenic_Rragc|Gm12916_chr4_124291608_R | GTCTCGTGGGCTCGGGGAGGTGGGGATGCAAATGA | 60.0 | 0.05 |
| mm4_intron_Wdfy3_chr5_101867415_F | Primer3: not found at this Tm | N.d. | 0.05 |
| mm4_intron_Wdfy3_chr5_101867415_R | Primer3: not found at this Tm | N.d. | 0.05 |
| mm4_intergenic_Ptplad2|Ifnb1_chr4_88447868_F | Primer3: not found at this Tm | N.d. | 0.05 |
| mm4_intergenic_Ptplad2|Ifnb1_chr4_88447868_R | Primer3: not found at this Tm | N.d. | 0.05 |
| mm4_intron_Tnfaip8_chr18_49997644_F | Primer3: not found at this Tm | N.d. | 0.05 |
| mm4_intron_Tnfaip8_chr18_49997644_R | Primer3: not found at this Tm | N.d. | 0.05 |
| mm4_intergenic_Thsd7a|Gm16123_chr6_12563047_F | Primer3: not found at this Tm | N.d. | 0.05 |
| mm4_intergenic_Thsd7a|Gm16123_chr6_12563047_R | Primer3: not found at this Tm | N.d. | 0.05 |
| mm4_exon_Mkl1_chr15_81026467_F | Primer3: not found at this Tm | N.d. | 0.05 |
| mm4_exon_Mkl1_chr15_81026467_R | Primer3: not found at this Tm | N.d. | 0.05 |
| mm4_intergenic_Dhrs3|Vps13d_chr4_144938916_F | Primer3: not found at this Tm | N.d. | 0.05 |
| mm4_intergenic_Dhrs3|Vps13d_chr4_144938916_R | Primer3: not found at this Tm | N.d. | 0.05 |
| mm4_intergenic_Tjp2|Fxn_chr19_24225517_F | Primer3: not found at this Tm | N.d. | 0.05 |
| mm4_intergenic_Tjp2|Fxn_chr19_24225517_R | Primer3: not found at this Tm | N.d. | 0.05 |
| mm4_intergenic_Dcst1|Zbtb7b_chr3_89365636_F | Primer3: not found at this Tm | N.d. | 0.05 |
| mm4_intergenic_Dcst1|Zbtb7b_chr3_89365636_R | Primer3: not found at this Tm | N.d. | 0.05 |
| mm4_intron_Chd6_chr2_161017889_F | TCGTCGGCAGCGTCCCTCGCAGTTCCAGGTTACA | 59.6 | 0.05 |
| mm4_intron_Chd6_chr2_161017889_R | GTCTCGTGGGCTCGGAGTATCCCATGGCCTTGTGC | 60.1 | 0.05 |
| mm4_intergenic_Kcnc4|Slc6a17_chr3_107459057_F | TCGTCGGCAGCGTCCTTCTGCGGAGTGGCTCTG | 60.4 | 0.05 |
| mm4_intergenic_Kcnc4|Slc6a17_chr3_107459057_R | GTCTCGTGGGCTCGGAAGCCAACTCTTCCTGCTCC | 59.9 | 0.05 |
| mm4_intergenic_Gm23186|Arid1b_chr17_4763300_F | TCGTCGGCAGCGTCAACAGGCAGAAGCAACCTGT | 60.1 | 0.05 |
| mm4_intergenic_Gm23186|Arid1b_chr17_4763300_R | GTCTCGTGGGCTCGGGAAAGAGGCCTGGTTCCACA | 59.8 | 0.05 |
| mm3_intron_Sez6_chr11_77931461_F | TCGTCGGCAGCGTCTCCACTCCAGGCGTCTAGG | 60.3 | 0.05 |
| mm3_intron_Sez6_chr11_77931461_R | GTCTCGTGGGCTCGGTCGAGCGAAGTTTGGAGACC | 60.0 | 0.05 |
| mm4_intergenic_Gm26626|Runx1_chr16_92634574_F | TCGTCGGCAGCGTCTGCTCACCCATATGCATCCC | 59.8 | 0.05 |
| mm4_intergenic_Gm26626|Runx1_chr16_92634574_R | GTCTCGTGGGCTCGGGGTGGGCCACTCCTTCTTTT | 60.1 | 0.05 |
| mm4_intron_Dach2_chrX_113726532_F | Primer3: not found at this Tm | N.d. | 0.05 |
| mm4_intron_Dach2_chrX_113726532_R | Primer3: not found at this Tm | N.d. | 0.05 |
| mm4_intergenic_Spty2d1|Tmem86a_chr7_47008600_F | TCGTCGGCAGCGTCGCGAGAGAGGGTTTCAGTGT | 59.6 | 0.05 |
| mm4_intergenic_Spty2d1|Tmem86a_chr7_47008600_R | GTCTCGTGGGCTCGGTCTGTACATCCACGCGTGAC | 60.1 | 0.05 |
| mm4_intergenic_Gm5616|Rexo2_chr9_48468338_F | TCGTCGGCAGCGTCACGTGGTGGAGAGTGGTCTA | 59.8 | 0.05 |
| mm4_intergenic_Gm5616|Rexo2_chr9_48468338_R | GTCTCGTGGGCTCGGCGTGTGTTTCGAACAGGGAG | 59.1 | 0.05 |
| mm4_intergenic_Elk3|mmu-mir-7688_chr10_93376680_F | TCGTCGGCAGCGTCTCGGAGTCAACATTCCCCAA | 58.9 | 0.05 |
| mm4_intergenic_Elk3|mmu-mir-7688_chr10_93376680_R | GTCTCGTGGGCTCGGTCTCTTGTCCTGAGTTGCCT | 58.2 | 0.05 |
| mm4_intergenic_Smug1|Cbx5_chr15_103177359_F | TCGTCGGCAGCGTCAGGCTCGTCCCATCCAATTG | 60.1 | 0.04 |
| mm4_intergenic_Smug1|Cbx5_chr15_103177359_R | GTCTCGTGGGCTCGGTCTGTAGAGGGATCAGGGCC | 60.1 | 0.04 |
| mm4_intron_Eps8_chr6_137482763_F | Primer3: not found at this Tm | N.d. | 0.04 |
| mm4_intron_Eps8_chr6_137482763_R | Primer3: not found at this Tm | N.d. | 0.04 |
| mm4_intron_Gm26801_chr1_177442275_F | Primer3: not found at this Tm | N.d. | 0.04 |
| mm4_intron_Gm26801_chr1_177442275_R | Primer3: not found at this Tm | N.d. | 0.04 |
| mm4_intron_Tiam1_chr16_89832645_F | TCGTCGGCAGCGTCACCGAGGAAAAGGAGCAAGG | 59.9 | 0.04 |
| mm4_intron_Tiam1_chr16_89832645_R | GTCTCGTGGGCTCGGGATCGCATCAGATCCTGGCA | 59.9 | 0.04 |
| mm4_intron_Anxa3_chr5_96796831_F | Primer3: not found at this Tm | N.d. | 0.04 |
| mm4_intron_Anxa3_chr5_96796831_R | Primer3: not found at this Tm | N.d. | 0.04 |
| mm4_exon_Frmd4a_chr2_4601199_F | TCGTCGGCAGCGTCTTACAGTCGCCACACAAGGG | 60.2 | 0.04 |
| mm4_exon_Frmd4a_chr2_4601199_R | GTCTCGTGGGCTCGGGTGATAGTGCAGCTGCCTGA | 60.1 | 0.04 |
| mm4_intron_Trio_chr15_27834999_F | Primer3: not found at this Tm | N.d. | 0.04 |
| mm4_intron_Trio_chr15_27834999_R | Primer3: not found at this Tm | N.d. | 0.04 |
| mm3_intron_Zzz3_chr3_152396151_F | Primer3: not found at this Tm | N.d. | 0.04 |
| mm3_intron_Zzz3_chr3_152396151_R | Primer3: not found at this Tm | N.d. | 0.04 |
| mm4_intron_Dlg1_chr16_31833904_F | Primer3: not found at this Tm | N.d. | 0.04 |
| mm4_intron_Dlg1_chr16_31833904_R | Primer3: not found at this Tm | N.d. | 0.04 |
| mm4_intergenic_Gm10505|Grm4_chr17_27418492_F | Primer3: not found at this Tm | N.d. | 0.04 |
| mm4_intergenic_Gm10505|Grm4_chr17_27418492_R | Primer3: not found at this Tm | N.d. | 0.04 |
| mm4_intergenic_Wwox|Gm16116_chr8_114568478_F | Primer3: not found at this Tm | N.d. | 0.04 |
| mm4_intergenic_Wwox|Gm16116_chr8_114568478_R | Primer3: not found at this Tm | N.d. | 0.04 |
| mm4_intergenic_Thbs4|Mtx3_chr13_92794858_F | TCGTCGGCAGCGTCCCCGCGCTTTATGGTCCA | 60.1 | 0.04 |
| mm4_intergenic_Thbs4|Mtx3_chr13_92794858_R | GTCTCGTGGGCTCGGGCTCTTCCTGGCAAATGGGG | 61.3 | 0.04 |
| mm4_intergenic_Gm10220|Gm7361_chr5_26234307_F | Primer3: not found at this Tm | N.d. | 0.04 |
| mm4_intergenic_Gm10220|Gm7361_chr5_26234307_R | Primer3: not found at this Tm | N.d. | 0.04 |
| mm4_intergenic_4930445N18Rik|Zfp516_chr18_82873952_F | TCGTCGGCAGCGTCGAGCCAACAGAGCTGACACT | 59.9 | 0.04 |
| mm4_intergenic_4930445N18Rik|Zfp516_chr18_82873952_R | GTCTCGTGGGCTCGGTTACCTCCACAGGAATGCCC | 59.3 | 0.04 |
| mm3_intergenic_Morc1|Trat1_chr16_48710839_F | Primer3: not found at this Tm | N.d. | 0.04 |
| mm3_intergenic_Morc1|Trat1_chr16_48710839_R | Primer3: not found at this Tm | N.d. | 0.04 |
| mm3_intergenic_Prima1|Fam181a_chr12_103242696_F | TCGTCGGCAGCGTCGGAAAACAGACGTGAGCGGA | 60.5 | 0.04 |
| mm3_intergenic_Prima1|Fam181a_chr12_103242696_R | GTCTCGTGGGCTCGGAGACGAGGAATCACTGCAGC | 60.1 | 0.04 |
| mm4_intron_Sos1_chr17_80469097_F | Primer3: not found at this Tm | N.d. | 0.04 |
| mm4_intron_Sos1_chr17_80469097_R | Primer3: not found at this Tm | N.d. | 0.04 |
| mm4_intergenic_Ogfrl1|Gm7784_chr1_23383331_F | Primer3: not found at this Tm | N.d. | 0.04 |
| mm4_intergenic_Ogfrl1|Gm7784_chr1_23383331_R | Primer3: not found at this Tm | N.d. | 0.04 |
| mm4_exon_Myo16_chr8_10634659_F | TCGTCGGCAGCGTCTGTCTTTCTGCCCACTGTCC | 59.8 | 0.04 |
| mm4_exon_Myo16_chr8_10634659_R | GTCTCGTGGGCTCGGGGCAATGGCGGAAATGAATGA | 59.8 | 0.04 |
| mm4_intergenic_Gm23752|Gm24815_chr12_7171843_F | TCGTCGGCAGCGTCACGGAATGCTCCAGTCCTTG | 60.0 | 0.03 |
| mm4_intergenic_Gm23752|Gm24815_chr12_7171843_R | GTCTCGTGGGCTCGGTGGGAGATGGTGAGAGACAGA | 59.6 | 0.03 |
| mm4_intron_Spata21_chr4_141097164_F | TCGTCGGCAGCGTCCCAACCCTGTCCAGCTCTTC | 60.3 | 0.03 |
| mm4_intron_Spata21_chr4_141097164_R | GTCTCGTGGGCTCGGCCGCTCCTAATCTCTGCACA | 59.5 | 0.03 |
| mm4_intron_Dock9_chr14_121727260_F | Primer3: not found at this Tm | N.d. | 0.03 |
| mm4_intron_Dock9_chr14_121727260_R | Primer3: not found at this Tm | N.d. | 0.03 |
| mm4_intergenic_Gm10782|Slc25a48_chr13_56432662_F | TCGTCGGCAGCGTCGCTCCAGCCCATCAGTATCC | 59.9 | 0.03 |
| mm4_intergenic_Gm10782|Slc25a48_chr13_56432662_R | GTCTCGTGGGCTCGGTAGCAAGTGGGAAGATGGCG | 60.1 | 0.03 |
| mm4_intergenic_Crispld2|Gm15684_chr8_120041715_F | TCGTCGGCAGCGTCGCGCTATGTGATGGGCCTAG | 60.6 | 0.03 |
| mm4_intergenic_Crispld2|Gm15684_chr8_120041715_R | GTCTCGTGGGCTCGGGCCGCTTTGCTGTAGCTTTT | 60.0 | 0.03 |
| mm4_intergenic_Cacng2|Cacng2/A730060N03Rik_chr15_78075639_F | Primer3: not found at this Tm | N.d. | 0.03 |
| mm4_intergenic_Cacng2|Cacng2/A730060N03Rik_chr15_78075639_R | Primer3: not found at this Tm | N.d. | 0.03 |
| mm4_exon_Polm_chr11_5835585_F | Primer3: not found at this Tm | N.d. | 0.03 |
| mm4_exon_Polm_chr11_5835585_R | Primer3: not found at this Tm | N.d. | 0.03 |
| mm4_intron_Nedd4_chr9_72662662_F | TCGTCGGCAGCGTCGTTCATCGTGGCGAGGGG | 60.5 | 0.03 |
| mm4_intron_Nedd4_chr9_72662662_R | GTCTCGTGGGCTCGGCGCCTCTCTCCATCTCCCC | 61.2 | 0.03 |
| mm3_intron_Hoxc9_chr15_102977535_F | Primer3: not found at this Tm | N.d. | 0.03 |
| mm3_intron_Hoxc9_chr15_102977535_R | Primer3: not found at this Tm | N.d. | 0.03 |
| mm4_intron_Wasf1_chr10_40884207_F | Primer3: not found at this Tm | N.d. | 0.03 |
| mm4_intron_Wasf1_chr10_40884207_R | Primer3: not found at this Tm | N.d. | 0.03 |
| mm4_intron_Osbpl8_chr10_111165438_F | TCGTCGGCAGCGTCAGCGGTACAAAGCCCAGTG | 60.3 | 0.03 |
| mm4_intron_Osbpl8_chr10_111165438_R | GTCTCGTGGGCTCGGCTGTCAAACTTCGGGAGGGG | 60.3 | 0.03 |
| mm4_intergenic_Gm11650|Cacng4_chr11_107794160_F | TCGTCGGCAGCGTCTTCTTTGTGTCTCGCGTGGA | 59.8 | 0.03 |
| mm4_intergenic_Gm11650|Cacng4_chr11_107794160_R | GTCTCGTGGGCTCGGTTGCATCGAAGGTAGGACCC | 59.4 | 0.03 |
| mm4_intergenic_Adamts6|Cwc27_chr13_104510294_F | TCGTCGGCAGCGTCGAGGGACAGATGTGGCTTCC | 60.1 | 0.03 |
| mm4_intergenic_Adamts6|Cwc27_chr13_104510294_R | GTCTCGTGGGCTCGGCCAGTGTCCAGATGGCAGAG | 60.1 | 0.03 |
| mm4_intron_Fras1_chr5_96617427_F | Primer3: not found at this Tm | N.d. | 0.03 |
| mm4_intron_Fras1_chr5_96617427_R | Primer3: not found at this Tm | N.d. | 0.03 |
| mm4_intergenic_Cela2a|Ctrc_chr4_141836457_F | Primer3: not found at this Tm | N.d. | 0.03 |
| mm4_intergenic_Cela2a|Ctrc_chr4_141836457_R | Primer3: not found at this Tm | N.d. | 0.03 |
| mm4_intergenic_Tacc3|Fgfr3_chr5_33689460_F | TCGTCGGCAGCGTCTGGGCAAATTCAGAAGGGCT | 59.8 | 0.03 |
| mm4_intergenic_Tacc3|Fgfr3_chr5_33689460_R | GTCTCGTGGGCTCGGGAGTCCCTTGAGTCCAGCC | 59.4 | 0.03 |
| mm4_intron_Mpped1_chr15_83846661_F | TCGTCGGCAGCGTCACACCAGGATCCAGGTTCCT | 60.1 | 0.03 |
| mm4_intron_Mpped1_chr15_83846661_R | GTCTCGTGGGCTCGGGCCCCTGGCTAATCATCCTC | 59.9 | 0.03 |
| mm4_exon_Anks1b_chr10_90829454_F | TCGTCGGCAGCGTCGAGCTCGTGGGGATCCGG | 61.9 | 0.03 |
| mm4_exon_Anks1b_chr10_90829454_R | GTCTCGTGGGCTCGGCCTTAGCCGTCGCCTCTAAG | 59.9 | 0.03 |
| mm4_intron_Afg3l1_chr8_123478077_F | TCGTCGGCAGCGTCCTGTGGCATTGCTCTGCAG | 59.4 | 0.02 |
| mm4_intron_Afg3l1_chr8_123478077_R | GTCTCGTGGGCTCGGAGGCAGAAATCGGGAAGACG | 60.1 | 0.02 |
| mm4_intron_Siglece_chr7_43658050_F | Primer3: not found at this Tm | N.d. | 0.02 |
| mm4_intron_Siglece_chr7_43658050_R | Primer3: not found at this Tm | N.d. | 0.02 |
| mm4_exon_Dgkd_chr1_87853291_F | Primer3: not found at this Tm | N.d. | 0.02 |
| mm4_exon_Dgkd_chr1_87853291_R | Primer3: not found at this Tm | N.d. | 0.02 |
| mm2_intergenic_Gm22227|Zfp703_chr8_26595343_F | Primer3: not found at this Tm | N.d. | 0.02 |
| mm2_intergenic_Gm22227|Zfp703_chr8_26595343_R | Primer3: not found at this Tm | N.d. | 0.02 |
| mm4_exon_Pcolce_chr5_137610682_F | TCGTCGGCAGCGTCCAGTCCAAGGACCACGGAAA | 59.8 | 0.02 |
| mm4_exon_Pcolce_chr5_137610682_R | GTCTCGTGGGCTCGGGGGGTAGAGGAGGTTAGGGG | 60.1 | 0.02 |
| mm4_intron_Slitrk2_chrX_66652911_F | TCGTCGGCAGCGTCCACTCACAGGGAAGGGAAGC | 60.3 | 0.02 |
| mm4_intron_Slitrk2_chrX_66652911_R | GTCTCGTGGGCTCGGAGAGGTTTTGCAGGCTCCTC | 59.9 | 0.02 |
| mm4_intron_Elf2_chr3_51276961_F | TCGTCGGCAGCGTCCGACTCCCCAACTTAGCCG | 60.1 | 0.02 |
| mm4_intron_Elf2_chr3_51276961_R | GTCTCGTGGGCTCGGGAGTAACCTGCCTCGGATCC | 59.6 | 0.02 |
| mm3_exon_Snx27_chr3_94582441_F | TCGTCGGCAGCGTCATTCGGACTTGACAATGCGC | 59.5 | 0.02 |
| mm3_exon_Snx27_chr3_94582441_R | GTCTCGTGGGCTCGGACGAGGACGGGGAAGGTATT | 60.3 | 0.02 |
| mm4_intergenic_Gm5544|Notch2_chr3_97977990_F | Primer3: not found at this Tm | N.d. | 0.02 |
| mm4_intergenic_Gm5544|Notch2_chr3_97977990_R | Primer3: not found at this Tm | N.d. | 0.02 |
| mm4_intergenic_Bri3|Nptx2_chr5_144510698_F | Primer3: not found at this Tm | N.d. | 0.02 |
| mm4_intergenic_Bri3|Nptx2_chr5_144510698_R | Primer3: not found at this Tm | N.d. | 0.02 |
| mm4_intergenic_Gpr108|Trip10_chr17_57248622_F | TCGTCGGCAGCGTCGGCGGAGAAAGCACCTACAG | 60.7 | 0.02 |
| mm4_intergenic_Gpr108|Trip10_chr17_57248622_R | GTCTCGTGGGCTCGGCTGGGGCTTAGGATTTCGGG | 60.1 | 0.02 |
| mm3_intron_Nkx6-3_chr8_23154502_F | Primer3: not found at this Tm | N.d. | 0.02 |
| mm3_intron_Nkx6-3_chr8_23154502_R | Primer3: not found at this Tm | N.d. | 0.02 |
| mm4_intergenic_Asb3|Gm12105_chr11_31111519_F | Primer3: not found at this Tm | N.d. | 0.02 |
| mm4_intergenic_Asb3|Gm12105_chr11_31111519_R | Primer3: not found at this Tm | N.d. | 0.02 |
| mm4_intergenic_Ddx11|Soga2_chr17_66290106_F | Primer3: not found at this Tm | N.d. | 0.02 |
| mm4_intergenic_Ddx11|Soga2_chr17_66290106_R | Primer3: not found at this Tm | N.d. | 0.02 |
| mm4_intergenic_Krt2|Krt1_chr15_101818615_F | Primer3: not found at this Tm | N.d. | 0.02 |
| mm4_intergenic_Krt2|Krt1_chr15_101818615_R | Primer3: not found at this Tm | N.d. | 0.02 |
| mm4_intergenic_A530064D06Rik|Trem1_chr17_48188687_F | Primer3: not found at this Tm | N.d. | 0.02 |
| mm4_intergenic_A530064D06Rik|Trem1_chr17_48188687_R | Primer3: not found at this Tm | N.d. | 0.02 |
| mm4_intron_Gm11100_chr14_13937637_F | TCGTCGGCAGCGTCGTGGACAGATCCCAGTGTGG | 60.0 | 0.02 |
| mm4_intron_Gm11100_chr14_13937637_R | GTCTCGTGGGCTCGGAACAAGAGAGAACAGCGGGA | 58.9 | 0.02 |
| mm4_intron_Cabin1_chr10_75706140_F | Primer3: not found at this Tm | N.d. | 0.02 |
| mm4_intron_Cabin1_chr10_75706140_R | Primer3: not found at this Tm | N.d. | 0.02 |
| mm4_intron_Mrpl48_chr7_100572247_F | TCGTCGGCAGCGTCCAGGCTTCAGCTCCAGTTCA | 59.9 | 0.02 |
| mm4_intron_Mrpl48_chr7_100572247_R | GTCTCGTGGGCTCGGGGTGTGTCAGAGCAGTCCAT | 59.6 | 0.02 |
| mm3_intron_Mgat5_chr1_127304728_F | Primer3: not found at this Tm | N.d. | 0.02 |
| mm3_intron_Mgat5_chr1_127304728_R | Primer3: not found at this Tm | N.d. | 0.02 |
| mm4_intron_Nrg2_chr18_36196030_F | Primer3: not found at this Tm | N.d. | 0.02 |
| mm4_intron_Nrg2_chr18_36196030_R | Primer3: not found at this Tm | N.d. | 0.02 |
| mm4_intron_Dgki_chr6_37187530_F | Primer3: not found at this Tm | N.d. | 0.01 |
| mm4_intron_Dgki_chr6_37187530_R | Primer3: not found at this Tm | N.d. | 0.01 |
| mm4_intron_Bmp6_chr13_38394704_F | TCGTCGGCAGCGTCGGTAGAGTCCAGGTGCCATG | 59.8 | 0.01 |
| mm4_intron_Bmp6_chr13_38394704_R | GTCTCGTGGGCTCGGAACCCACCACACTAGCTTGG | 59.8 | 0.01 |
| mm4_intergenic_Gm22684|Anxa1_chr19_20275103_F | Primer3: not found at this Tm | N.d. | 0.01 |
| mm4_intergenic_Gm22684|Anxa1_chr19_20275103_R | Primer3: not found at this Tm | N.d. | 0.01 |
| mm4_intergenic_Gm15131|Maged2_chrX_150768182_F | Primer3: not found at this Tm | N.d. | 0.01 |
| mm4_intergenic_Gm15131|Maged2_chrX_150768182_R | Primer3: not found at this Tm | N.d. | 0.01 |
| mm4_intron_N6amt2_chr14_57571508_F | Primer3: not found at this Tm | N.d. | 0.01 |
| mm4_intron_N6amt2_chr14_57571508_R | Primer3: not found at this Tm | N.d. | 0.01 |
| mm4_intron_Tmem206_chr1_191328604_F | Primer3: not found at this Tm | N.d. | 0.01 |
| mm4_intron_Tmem206_chr1_191328604_R | Primer3: not found at this Tm | N.d. | 0.01 |
| mm4_intergenic_Gm22097|Gm23041_chr10_109101233_F | Primer3: not found at this Tm | N.d. | 0.01 |
| mm4_intergenic_Gm22097|Gm23041_chr10_109101233_R | Primer3: not found at this Tm | N.d. | 0.01 |
| mm3_intron_Jarid2_chr13_44730343_F | TCGTCGGCAGCGTCCTCCAACCCCTCGCTGAC | 59.7 | 0.01 |
| mm3_intron_Jarid2_chr13_44730343_R | GTCTCGTGGGCTCGGCGCCTGTGGAATCGAGGAAT | 60.1 | 0.01 |
| mm4_exon_Diras1_chr10_81019769_F | TCGTCGGCAGCGTCGTCCCCAGCACCAGAGATG | 59.7 | 0.01 |
| mm4_exon_Diras1_chr10_81019769_R | GTCTCGTGGGCTCGGCTTCTCCTGGCTGGCCTTG | 60.3 | 0.01 |
| mm4_intron_Sirt1_chr10_63339100_F | TCGTCGGCAGCGTCCTCGGCTGCGGGAGATTTAA | 60.1 | 0.01 |
| mm4_intron_Sirt1_chr10_63339100_R | GTCTCGTGGGCTCGGGTGACCCGGCGTGTTGTG | 61.6 | 0.01 |
| mm4_intron_Hic1_chr11_75168680_F | Primer3: not found at this Tm | N.d. | 0.01 |
| mm4_intron_Hic1_chr11_75168680_R | Primer3: not found at this Tm | N.d. | 0.01 |
| mm4_intergenic_Kcnj8|Abcc9_chr6_142571503_F | Primer3: not found at this Tm | N.d. | 0.01 |
| mm4_intergenic_Kcnj8|Abcc9_chr6_142571503_R | Primer3: not found at this Tm | N.d. | 0.01 |
| mm3_exon_Gm10760/Mctp1_chr13_76384445_F | Primer3: not found at this Tm | N.d. | 0.01 |
| mm3_exon_Gm10760/Mctp1_chr13_76384445_R | Primer3: not found at this Tm | N.d. | 0.01 |
| mm4_intergenic_Nrg3|Gm10713_chr14_39473278_F | TCGTCGGCAGCGTCTGTGTGCGCTCCAGCCTC | 62.6 | 0.01 |
| mm4_intergenic_Nrg3|Gm10713_chr14_39473278_R | GTCTCGTGGGCTCGGACGTGAGGATTTGAGGTGGG | 59.6 | 0.01 |
| mm4_intron_Nrg2_chr18_36037082_F | TCGTCGGCAGCGTCGCCAAGGCAGTGATAAGGGT | 60.0 | 0.01 |
| mm4_intron_Nrg2_chr18_36037082_R | GTCTCGTGGGCTCGGGGTCTTGACCAGGCTTTCCT | 59.5 | 0.01 |
| mm4_intergenic_Gm12142|A230004M16Rik_chr11_41605430_F | Primer3: not found at this Tm | N.d. | 0.01 |
| mm4_intergenic_Gm12142|A230004M16Rik_chr11_41605430_R | Primer3: not found at this Tm | N.d. | 0.01 |
| mm4_intergenic_Fbxl4|Pou3f2_chr4_22477760_F | Primer3: not found at this Tm | N.d. | 0.01 |
| mm4_intergenic_Fbxl4|Pou3f2_chr4_22477760_R | Primer3: not found at this Tm | N.d. | 0.01 |
| mm4_intergenic_Atg5|Prdm1_chr10_44368925_F | Primer3: not found at this Tm | N.d. | 0.01 |
| mm4_intergenic_Atg5|Prdm1_chr10_44368925_R | Primer3: not found at this Tm | N.d. | 0.01 |
| mm4_intergenic_A430105J06Rik|Gm3809_chr1_186795034_F | Primer3: not found at this Tm | N.d. | 0.01 |
| mm4_intergenic_A430105J06Rik|Gm3809_chr1_186795034_R | Primer3: not found at this Tm | N.d. | 0.01 |
| mm4_intron_Klf10_chr15_38299855_F | TCGTCGGCAGCGTCTCTGCAGGCTCCCAGACG | 61.3 | 0.01 |
| mm4_intron_Klf10_chr15_38299855_R | GTCTCGTGGGCTCGGCAGGGTCCTGCCTTGGAG | 59.3 | 0.01 |
| mm3_intergenic_Asphd2|Sez6l_chr5_112395407_F | TCGTCGGCAGCGTCTCCTTGGAACAGTGCATGGG | 60.2 | 0.01 |
| mm3_intergenic_Asphd2|Sez6l_chr5_112395407_R | GTCTCGTGGGCTCGGGAGGACAGACACAGATGGGC | 60.1 | 0.01 |
| mm4_intergenic_Ralyl|Gm25981_chr3_13818202_F | Primer3: not found at this Tm | N.d. | 0.01 |
| mm4_intergenic_Ralyl|Gm25981_chr3_13818202_R | Primer3: not found at this Tm | N.d. | 0.01 |
| mm4_intron_G730013B05Rik_chr16_50530245_F | Primer3: not found at this Tm | N.d. | 0.01 |
| mm4_intron_G730013B05Rik_chr16_50530245_R | Primer3: not found at this Tm | N.d. | 0.01 |
| mm4_intergenic_Gm22495|Dtna_chr18_23310015_F | Primer3: not found at this Tm | N.d. | 0.01 |
| mm4_intergenic_Gm22495|Dtna_chr18_23310015_R | Primer3: not found at this Tm | N.d. | 0.01 |
| mm4_exon_Arl4c_chr1_88702220_F | TCGTCGGCAGCGTCTCTAGTCCCGCCCACAGG | 60.3 | 0.01 |
| mm4_exon_Arl4c_chr1_88702220_R | GTCTCGTGGGCTCGGTGGGCGAGTTTCGAACGATC | 60.7 | 0.01 |
| mm4_intron_Lmo3_chr6_138551012_F | Primer3: not found at this Tm | N.d. | 0.01 |
| mm4_intron_Lmo3_chr6_138551012_R | Primer3: not found at this Tm | N.d. | 0.01 |
| mm4_intron_Crtac1_chr19_42310505_F | TCGTCGGCAGCGTCCCTCACCTGCTTCCTGGAAA | 59.5 | 0.01 |
| mm4_intron_Crtac1_chr19_42310505_R | GTCTCGTGGGCTCGGACTCCAGCAGCTTGTGAGAA | 59.2 | 0.01 |
| mm4_intergenic_AY702102|A630075F10Rik_chr2_169997009_F | TCGTCGGCAGCGTCTCATTACTGGAGGCGAGGGA | 60.0 | 0.01 |
| mm4_intergenic_AY702102|A630075F10Rik_chr2_169997009_R | GTCTCGTGGGCTCGGTCCTCTCTCTTCCCAGAGCC | 60.0 | 0.01 |
| mm4_intergenic_Slain1|Ednrb_chr14_103755222_F | Primer3: not found at this Tm | N.d. | 0.01 |
| mm4_intergenic_Slain1|Ednrb_chr14_103755222_R | Primer3: not found at this Tm | N.d. | 0.01 |
| mm4_exon_Coro1c_chr5_113849647_F | Primer3: not found at this Tm | N.d. | 0.01 |
| mm4_exon_Coro1c_chr5_113849647_R | Primer3: not found at this Tm | N.d. | 0.01 |
| mm4_intron_Phlpp2_chr8_109868877_F | Primer3: not found at this Tm | N.d. | 0.01 |
| mm4_intron_Phlpp2_chr8_109868877_R | Primer3: not found at this Tm | N.d. | 0.01 |
| mm4_exon_Cacnb4_chr2_52676381_F | TCGTCGGCAGCGTCCGTACGAGGACGACATGGTT | 59.8 | 0.01 |
| mm4_exon_Cacnb4_chr2_52676381_R | GTCTCGTGGGCTCGGAGGAGCCGGGTAGGGAAG | 60.0 | 0.01 |
| mm4_intergenic_Sh3pxd2a|Obfc1_chr19_47465164_F | Primer3: not found at this Tm | N.d. | 0.01 |
| mm4_intergenic_Sh3pxd2a|Obfc1_chr19_47465164_R | Primer3: not found at this Tm | N.d. | 0.01 |
| mm4_exon_Adra2c_chr5_35279251_F | Primer3: not found at this Tm | N.d. | 0.01 |
| mm4_exon_Adra2c_chr5_35279251_R | Primer3: not found at this Tm | N.d. | 0.01 |
| mm4_exon_C77080_chr4_129248342_F | Primer3: not found at this Tm | N.d. | 0.01 |
| mm4_exon_C77080_chr4_129248342_R | Primer3: not found at this Tm | N.d. | 0.01 |
| mm4_intron_Exoc4_chr6_33249349_F | Primer3: not found at this Tm | N.d. | 0.01 |
| mm4_intron_Exoc4_chr6_33249349_R | Primer3: not found at this Tm | N.d. | 0.01 |
| mm4_intergenic_Gm14169|Dlgap4_chr2_156613491_F | Primer3: not found at this Tm | N.d. | 0.01 |
| mm4_intergenic_Gm14169|Dlgap4_chr2_156613491_R | Primer3: not found at this Tm | N.d. | 0.01 |
| mm4_intergenic_Pard3b|Gm11610_chr1_62441938_F | TCGTCGGCAGCGTCGGCCAGGCATTTCAACACTC | 59.7 | 0.01 |
| mm4_intergenic_Pard3b|Gm11610_chr1_62441938_R | GTCTCGTGGGCTCGGCCAGTACTCCAGGGTTGGGA | 60.5 | 0.01 |
| mm4_exon_Inpp5a_chr7_139389380_F | TCGTCGGCAGCGTCCCACCCAGTCCAGAGCCC | 61.7 | 0.01 |
| mm4_exon_Inpp5a_chr7_139389380_R | GTCTCGTGGGCTCGGGGCACTTACGTCGTCGAAGA | 60.1 | 0.01 |
| mm4_intergenic_Ccne1|Gm22203_chr7_38130150_F | TCGTCGGCAGCGTCGGCCTCTTCAACAGACTGCT | 59.9 | 0.01 |
| mm4_intergenic_Ccne1|Gm22203_chr7_38130150_R | GTCTCGTGGGCTCGGGCTCGATCCTGCTCTCCAC | 59.9 | 0.01 |
| mm4_exon_Cited4_chr4_120667161_F | Primer3: not found at this Tm | N.d. | 0.00 |
| mm4_exon_Cited4_chr4_120667161_R | Primer3: not found at this Tm | N.d. | 0.00 |
| mm4_intergenic_Cryl1|Gm23593_chr14_57320717_F | Primer3: not found at this Tm | N.d. | 0.00 |
| mm4_intergenic_Cryl1|Gm23593_chr14_57320717_R | Primer3: not found at this Tm | N.d. | 0.00 |
| mm4_exon_Has1_chr17_17850049_F | Primer3: not found at this Tm | N.d. | 0.00 |
| mm4_exon_Has1_chr17_17850049_R | Primer3: not found at this Tm | N.d. | 0.00 |
| mm4_exon_Cenpb_chr2_131179934_F | Primer3: not found at this Tm | N.d. | 0.00 |
| mm4_exon_Cenpb_chr2_131179934_R | Primer3: not found at this Tm | N.d. | 0.00 |
| mm4_intron_Sh3glb1_chr3_144719804_F | TCGTCGGCAGCGTCGGTGAACCCAAGGTGTCCG | 60.6 | 0.00 |
| mm4_intron_Sh3glb1_chr3_144719804_R | GTCTCGTGGGCTCGGTACCCAGGCCTGCCGATG | 61.4 | 0.00 |
| mm4_exon_Pianp_chr6_124996773_F | Primer3: not found at this Tm | N.d. | 0.00 |
| mm4_exon_Pianp_chr6_124996773_R | Primer3: not found at this Tm | N.d. | 0.00 |
| mm4_intron_Adamtsl3_chr7_82396989_F | TCGTCGGCAGCGTCTCCTGTGAAGAGGACTGGGT | 59.8 | 0.00 |
| mm4_intron_Adamtsl3_chr7_82396989_R | GTCTCGTGGGCTCGGCTGGCCTCTCTTGTGTCCTG | 60.0 | 0.00 |
| mm4_exon_Plod2_chr9_92542467_F | TCGTCGGCAGCGTCCGTCTCGCGAGAAGTCCTC | 59.9 | 0.00 |
| mm4_exon_Plod2_chr9_92542467_R | GTCTCGTGGGCTCGGGAGAGCAGGGCGAGCATG | 60.5 | 0.00 |
| mm4_exon_Tfap2c_chr2_172549709_F | TCGTCGGCAGCGTCCACATCTCTGTGCACAGCCA | 60.6 | 0.00 |
| mm4_exon_Tfap2c_chr2_172549709_R | GTCTCGTGGGCTCGGCCCGAGCGGTAAATCCACAA | 60.3 | 0.00 |
| mm4_intergenic_Gm24298|4921513I03Rik_chr10_120694322_F | Primer3: not found at this Tm | N.d. | 0.00 |
| mm4_intergenic_Gm24298|4921513I03Rik_chr10_120694322_R | Primer3: not found at this Tm | N.d. | 0.00 |
| mm4_exon_Foxc1_chr13_31807917_F | TCGTCGGCAGCGTCGCGCATCCAGGACATCAAGA | 60.4 | 0.00 |
| mm4_exon_Foxc1_chr13_31807917_R | GTCTCGTGGGCTCGGCTGTCGGGGCTCTCGATTTT | 60.1 | 0.00 |
| mm4_intergenic_Nckipsd|Celsr3_chr9_108826276_F | Primer3: not found at this Tm | N.d. | 0.00 |
| mm4_intergenic_Nckipsd|Celsr3_chr9_108826276_R | Primer3: not found at this Tm | N.d. | 0.00 |
| mm4_exon_Rsbn1_chr3_103914878_F | TCGTCGGCAGCGTCGTCCCGGGCCCTGTTGAA | 61.9 | 0.00 |
| mm4_exon_Rsbn1_chr3_103914878_R | GTCTCGTGGGCTCGGGAGGCGAGAAGGTGAAGAGG | 59.8 | 0.00 |
| mm4_intergenic_Gm14060|Btbd3_chr2_138468354_F | TCGTCGGCAGCGTCAGCTGACCAACCAACTCCAG | 59.8 | 0.00 |
| mm4_intergenic_Gm14060|Btbd3_chr2_138468354_R | GTCTCGTGGGCTCGGGTACCTAGCTGTCGCGGTC | 59.9 | 0.00 |
| mm4_intron_Myl12a_chr17_71002070_F | Primer3: not found at this Tm | N.d. | 0.00 |
| mm4_intron_Myl12a_chr17_71002070_R | Primer3: not found at this Tm | N.d. | 0.00 |
| mm4_intron_Slit1_chr19_41685610_F | TCGTCGGCAGCGTCCCCTGCCCAATTAACACCCT | 59.9 | 0.00 |
| mm4_intron_Slit1_chr19_41685610_R | GTCTCGTGGGCTCGGGAAGAGGAGGCAGGAACACC | 60.0 | 0.00 |
| mm4_intron_Mrvi1_chr7_110963006_F | TCGTCGGCAGCGTCCAGTTCCCACCCCAGCTTC | 60.3 | 0.00 |
| mm4_intron_Mrvi1_chr7_110963006_R | GTCTCGTGGGCTCGGTCAGGAGATAGAGGCCAGCA | 59.7 | 0.00 |
| mm4_intron_Dapp1_chr3_137977797_F | TCGTCGGCAGCGTCGGAGGAGTAGACCTAGCCGT | 59.8 | 0.00 |
| mm4_intron_Dapp1_chr3_137977797_R | GTCTCGTGGGCTCGGCCTCTTCAGTGCATCAGGGG | 60.1 | 0.00 |
| mm4_intron_Cyth3_chr5_143694353_F | Primer3: not found at this Tm | N.d. | 0.00 |
| mm4_intron_Cyth3_chr5_143694353_R | Primer3: not found at this Tm | N.d. | 0.00 |
| mm4_intergenic_n-R5s30|Rbfox1_chr16_5495572_F | TCGTCGGCAGCGTCAGGGTTCCAGGTTAGGGTCA | 59.8 | 0.00 |
| mm4_intergenic_n-R5s30|Rbfox1_chr16_5495572_R | GTCTCGTGGGCTCGGGCCCCTTTCATCCTGAGGAG | 59.8 | 0.00 |
| mm4_intergenic_Sbno1|Setd8_chr5_124426415_F | Primer3: not found at this Tm | N.d. | 0.00 |
| mm4_intergenic_Sbno1|Setd8_chr5_124426415_R | Primer3: not found at this Tm | N.d. | 0.00 |
| mm4_intergenic_Pabpc6|Qk_chr17_9928012_F | TCGTCGGCAGCGTCACCCTAAGCTGTTTCCCGTC | 59.6 | 0.00 |
| mm4_intergenic_Pabpc6|Qk_chr17_9928012_R | GTCTCGTGGGCTCGGTTTGCTCTCTGGAGGACGC | 59.7 | 0.00 |
| mm4_intergenic_En1|B230209K01Rik_chr1_120942147_F | TCGTCGGCAGCGTCTGTGTGCAATGAATTCACAGAACA | 59.9 | 0.00 |
| mm4_intergenic_En1|B230209K01Rik_chr1_120942147_R | GTCTCGTGGGCTCGGCTGGCTTCTGTTGGAGGGTT | 59.8 | 0.00 |
| mm4_intergenic_Cdc7|Tgfbr3_chr5_107044947_F | Primer3: not found at this Tm | N.d. | 0.00 |
| mm4_intergenic_Cdc7|Tgfbr3_chr5_107044947_R | Primer3: not found at this Tm | N.d. | 0.00 |
| mm4_intergenic_3110047P20Rik|Gm3687_chr5_63656245_F | Primer3: not found at this Tm | N.d. | 0.00 |
| mm4_intergenic_3110047P20Rik|Gm3687_chr5_63656245_R | Primer3: not found at this Tm | N.d. | 0.00 |
| mm4_exon_Tnk2_chr16_32668298_F | Primer3: not found at this Tm | N.d. | 0.00 |
| mm4_exon_Tnk2_chr16_32668298_R | Primer3: not found at this Tm | N.d. | 0.00 |
| mm4_exon_Pcbp1_chr6_86525964_F | TCGTCGGCAGCGTCTCACGTTGAGTCCGCTTTCA | 59.8 | 0.00 |
| mm4_exon_Pcbp1_chr6_86525964_R | GTCTCGTGGGCTCGGCAGTTCGGGCCTACTCCTC | 59.1 | 0.00 |
| mm4_exon_Insm1_chr2_146222501_F | Primer3: not found at this Tm | N.d. | 0.00 |
| mm4_exon_Insm1_chr2_146222501_R | Primer3: not found at this Tm | N.d. | 0.00 |
| mm4_exon_Ica1_chr6_8778337_F | Primer3: not found at this Tm | N.d. | 0.00 |
| mm4_exon_Ica1_chr6_8778337_R | Primer3: not found at this Tm | N.d. | 0.00 |
| mm3_intron_Tbc1d5_chr17_51179033_F | Primer3: not found at this Tm | N.d. | 0.00 |
| mm3_intron_Tbc1d5_chr17_51179033_R | Primer3: not found at this Tm | N.d. | 0.00 |
These only list off-targets that have primers in the table above. Primers underlined, off-targets in bold.
| ontarget_mm0_exon_5730457N03Rik/Evx1_chr6_52314013 |
AACCGCCAGAGAAGATGGTGCCCCACGGTTGCCTGAGCCCGCGAGCCGGCCCTCCGACTTCCCGGGAGCGTGGCGGGGGA GGCCAGGAGGAGGAGCCGGTCGATGGACTAGCAGGCAG |
| mm4_intron_Fam186b_chr15_99285113 |
CCTGGCCTCTTCCTGTTCTCTGCTTTCTGGTTGCATGAGTGGAGCAGCCTCCTCTGCCACAATCCCTGGGACTCACTCTC ACCATGAGCTAAGTGATAGGGCCAAGAGATCACCACTG |
| mm3_intergenic_Tenm4|Gm15414_chr7_96559034 |
GGGTATCTCCAGGGCATGTGAAGAGAGCGCTTACCAAGTCGGCTTGCTTCACCCTCCACGCTCCCCGGCCCCAGACTCTT GAGAGTTATTCTTACCAAGATCTAGAAGAAAAACTGTCAGGAAGCTCGAAATGT |
| mm2_exon_Clu_chr14_65974704 |
TGGACAGGGAAGCTTAGGGAATGGCTGGGCCTTGAAGAAGGAGAGGCTCCTGAGAGCGTGGCTGGGGAGGCCCAACAGAA GGGCTAGAGCG |
| mm4_intron_Mat2b_chr11_40692368 |
GACTACTGAAACGGGAGCCAGCCCGCGGGAGGCGGCGGGAGGCACCGGGAGTCTCCACCTCCGCGCTCCCCGGGCTGCAG CGGGCGTGAGCGCAGCCCTACAGGGAGAGAGGTAAACAAACTCAAAGGCGCCAC |
| mm4_intergenic_Uncx|Micall2_chr5_139613841 |
CCATGTCTGTCTGGCACCTGCCCCAGCTGCCTGGGTGCATGGTGGGTGAGGCTCCGGCTAGATCCTGGGGACCTGGTGGC AAGGGAGGGCTGGGCTCTGGCTCTGCCTGCTAAGAGGGGTTTG |
| mm4_intron_Tjp1_chr7_65370531 |
GGTACCAACCACTCCTCCAGAGCCAGCCCCGCGGCTACCCACCCACCCTCCTGCTGCAGCTGACACCCCCGGGTCTCCGC AGACACGCTCCCGGGACCTGAGAATCCTCACCCGGGG |
| mm4_intron_Cux2_chr5_122030644 |
CTCCGTGAAGGCAGACAGCGAGTCTACTTTGATCACNNNNNNNNNNNNNNNNNNNNNCCTGGGGGCGTGGAGGGGGCGTC CCTGGTGTGTGGCTGGCTGCCTCGCAGTGAGGAGATGCAA |
| mm4_exon_Hck_chr2_153136741 |
TTTCCCCAGCCACCTACAACAAGCACACCAAAGTGGCGGTGAAGACAATGAAGCCAGGGAGCATGTCCGTGGAGGCCTTC CTGGCTGAGGCCAACCTGATGAAGTCGCTGCAGCATG |
| mm3_intron_Impdh1_chr6_29215976 |
GCAATGGCAGTAGAGGGGACCTGCCTCTGGCCTCCCCCGCAGCGCTACCCGGTCTCCCGGCGTTGCCGCGCCCTTCTCTG CCGCCCGCCCCGGATGCGCCCGCGCGCCTTGCCCTGGGCGTCACCTCTCCGGCTCGTA |
| mm4_intergenic_Gm11468|Gm14268_chr2_166318552 |
TCAGGTTCGGAAAGACCACGGCCTCTGTTTGACGGTTTGAGAGGCATCTGTTTGCCCACTCTGTTTCTGACTTCCCCACC ACGCTCTCTGGGGGTCACTCATTTTCCCCTTTGTAGTCCTCCAGGCTCACA |
| mm4_intron_Ahdc1_chr4_133016462 |
GTCAGGCTTCCAAGAGCTGAGGATGTGAGAGCCAGGGAGCTTGGAGGGAGAGGGCAGGGAGGGCTGCTCTGAAGGGGGAG AGAGAAAGAGCCCAGCCAG |
| mm4_exon_Slc16a2_chrX_103707915 |
ACTGAACCAGAAAGCGCTGTCGCAGGGTGTGGGCACCTCTCTTGCTTGGGGTGTCCTGGGAGCTTGGCAGGAGGGGCCGG TAAGTGAGTGAGAGCAGCGTAAGGACA |
| mm4_intergenic_Fam46a|Gm25125_chr9_85469361 |
CATCCCCTAGCACACAGAGGGAATTATACAACGGCTGATAAAGAGAATTGTAAACTGTGCCTCCCCCACCACCACCCCAG GGTTAAAATGGAAGGAAGTTGAGGAGCAGTGACCCAGCTCCTACAGAAAAGCCGCTCC |
| mm4_intron_Rem2_chr14_54476545 |
GGAGACCCCTGCACTTTTGAGGTCCGGACGGCCAAGGGGAAGGGGGAAAGCTGCCAGGGTGCCCCTCCCCCAACGCTCCC AGGGCTTCGCCAGAGAAACTGGCACTTGGCCCCTAGGTTAA |
| mm4_intron_Zcchc11_chr4_108459714 |
ACCTCCATCCCCTCCTCATTGTTTCCGGGCGACCGCCACGAGCCCCGGAACGAAGCCCCTCCCCCCACGCCCCCCGGTCT ACCCCCTCCTCCGCCGAGGTTTGACGGGTGCTTGG |
| mm4_intergenic_Lrrc55|Gm13713_chr2_85163729 | GGGATGGGCAATGTGGAGAAGCCAGGGAATGTGGAGGGGGAGGGGAAAACCCCTAGCTACTGGGACAG |
| mm4_intron_Scaf8_chr17_3115619 |
AGGGCTGAGGGAAGGCAGGGGGAGGGCCGGTCCCCAAGGCGGCCGCGCCACGCTCCCGGGTGGGTTCCACCGAGGACTAT CACCTCCCACCC |
| mm4_intergenic_Gm23534|Gm22727_chr1_137671266 |
TGGATGGGTACGCATTGCTTCTTGTCAACTGCTTCTGCTCCACCAGCTGTGTGGAGCACAGCTAACTTCCAGGGAGCTTG GCAAGGCAGGCATTCAGTTCGTTCTCTGGGGA |
| mm4_intergenic_St6galnac5|St6galnac3_chr3_153064142 |
CACCTGGACACTACAGCACGCCCCCCCCCCCCACACGCTCCCTGGGGGCAAACTTAACATGAAAGAAGATCAGACTGTCT TCCCCTGCT |
| mm2_intergenic_Olfm1|Gm13373_chr2_28290288 |
ATGCACCTGCTTAATGCCCTAATGTCAGAGCAAATAAATATCCTTGGAGCTGCCCCTCCCCCGCCACGCCCCCCAGCGGC TGTTCTCCTGAGCCCTGCATGTCTTT |
| mm4_intergenic_Gm5083|Gm27007_chr13_44374757 |
AGTGCACAACTCCAAGTGGGTAATGCCTAGAGCTGTCTGCCTCCCCCACCCCACCCCCAGGAGCCGAGTCTTCTGCCACC CTGTGAAGTCAT |
| mm4_exon_Cnnm1_chr19_43440894 | GACGTGGAGGTCCTGGGGCCCCTGCGCCCCGGGGGCGTGGCGGGCTCGGCCCTGGTCCAGGTGCGGGTG |
| mm4_intron_Eif4enif1_chr11_3227569 |
TGGCAGGTAAGATGACTTCACATACTAGCCTTGTATGTCAAGTGGGCCTCCCCTGCCATGCTTCTAGGGTTAAAGAGACT TTAGATATGGAAAAGCCTTCAGTTTCTATTCTCTTTATGCTGTGGAAGGGAAGTTTTC |
| mm4_intron_Afap1l2_chr19_57006846 |
CGACCTTGGAAGTCGGGATTTCCAGTGAGGAGACGCCCAAGGCCCCAATCGGCTCCCCCTCCTCGCCCCCAGGTTCCCTC CCTAAGTGGGGAGCAGCAAGAGCCGCCTCTCTTCTACCAAG |
| mm4_intron_Tmod2_chr9_75601800 |
TCAACACGCAACAGGATCCTAAATCACACCCTGGGATGGAGCACGTGCGCCCCCCCCCCCCCCACGCTTCCAGGAGCCCA GGTGGGCAAACACAGAGCCCATTAGCAAACTGGAAACTGGGAGTGACAGCGA |
| mm4_intergenic_Bnip1|Nkx2-5_chr17_26828086 |
GGGCTCAGAGGCTAATTGCTTGCCTCACCTGCCACAGTCCCCGGCTCAACCTGCACTTGACTCCAGACCGCAGGTCCCAG AGGCTGTGGATGAAAGAGCAGAAAATGAATTCCAGGTCTTGATTTCAGCCCACAGCCT |
| mm3_intron_Fblim1_chr4_141599204 |
TCCTCAGGCTACCGGTCTTTTGTANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGGGAGGCCAGCTGGTCGTTCAGCCCCAG |
| mm4_intron_Caln1_chr5_130618015 |
TGAGACCTGCTTAGCACTGCCAGGCTGTGCCTCCCCCACCACATTCACTGGGCCTGGGATTTATACAAGTCTCACACTCA GAGCCCT |
| mm4_intron_Sez6_chr11_77960122 |
CCAGCAGAACACGATCAGGTACAGGTTAGAAGTCAAGCTGGAGATACAAGAAACTAGGAAGAAAATTCTTCCTTGATTTC AACCCCCTGCCTCCTCCTCCACCCTTCCTGGAGGCACTCTGAGAGACCCACCTG |
| mm4_intron_Prpf18_chr2_4639984 |
ATGCTGAGCAGAAGAGCCAGGGAGCAGGGCTGGGGATGCTGAGCAGAAGAGCCAGGGAGCAGGGCTGGGGATGCTGTTAC AAATCTAAAAATCCAAGGAGCTAAGGAGC |
| mm4_intron_Ctdsp2_chr10_126979703 | CCGGAGTTTTCACGCAGGACCGGGATGCCCGGGAGCTCGGCGGTGGCGGCGCGGGGACTCGGGACGAAGTTCAC |
| mm4_intergenic_Wnt4|Cdc42_chr4_137315009 |
TTCAGTCATTACACGCCCCGCCTCCCCCGTCCCCCTTACCACCTCCCTGCCCCGCCAAGCCCCCAGGATGGACTTGGAGT CAACATACCCCTTTTCAGTATTTACCAACATGGCCTTGCTAACT |
| mm4_exon_Usp49/Gm20517_chr17_47672699 |
CTGGAGGAGCTGGCCAGTGCGCCGCCGCGGAAGAGTGCGCGCCTGCTCCTGCACGCTCCCGGGCCCGTGGCCGTGCGCCC TGCCACCCTCGCTACCTC |
| mm4_exon_Ephb4_chr5_137372201 |
GTCAGCGCTCTGGACAAGATGATCCGGAATCCCGCTAGCCTCAAAATCGTGGCCAGGGAGAATGGCGGGTGAGGATCCCA AAGGACAGCTCCGACCCACAACCCAAGAGTCC |
| mm4_intron_B230219D22Rik_chr13_55693576 |
AGTCTCGCCCTGGAGCTGCGGTCGTCCCCGCATCCCGAGAGCGCGGCGGGGAACGCCTCGGGGTCCCGTTAGGATGCTGA CTTGGGGAAGCGCCGTGGGGCACGGCTAAGGAGCGCAGAGAAGA |
| mm4_intergenic_Taf1b|Grhl1_chr12_24566625 |
GTTGCTCACAGGGGACTCAAAGGTTAAGCAGCTTCCTACATCTCAAGCTAGAGAAGGTGGGGAAAGTCAAACTCCGTTGC CTCCCACACCCTGCTCCCCGGAGTGGAAAGTCCTTCATCTCTGGCTGGC |
| mm4_intron_Lrrc41_chr4_116075661 |
GGGGTAAGTCGCGGAGTGAGGGGCGACCTCCGGCAGCGANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNAGGC CGAGAGGCCCGGGGCCAGGCCCAGCTGGGAGCCCCGGGAGTTCGATGGTGGAGTC |
| mm4_intron_Fosl2_chr5_32152046 |
ACAAGTCAGGTGCTGTCTGTTTCAGTCCCATNNNNNNNNNNNNNNNNNNNNNNNNNNNNTAGAGGGCTGTCATGGGGGTC TGCTCTTGTGCAGCTCAGGCTGTGTGCGCTGGTGGGCTGAGATGGTAA |
| mm4_intron_Ndrg2_chr14_51911843 |
CCAAGACACACGGAGAGCTTTTCTGGCTCCCCCGCCCCACTTCCAGGGCAATACCAAACAGGACAGCACATCTCTTCAGA CCACCGGCCCCATGGCTGCCGGCTGCCCCTCAACCCCAACATTCTCACCTCG |
| mm4_intron_Igf2bp3_chr6_49117016 |
TGTGAGACCAACAACGCATGATCAGGTGACAAGGCTTCCCCTGCCACAGTCCCAGGTACTGTAGAAGAGAACTCCTGGCT TTGTCCAGAGAGACATCAAGTTCCTGCATCCAACCCTGA |
| mm4_intron_Glipr2_chr4_43972426 |
CCTTAGGTGCAGATCTGGGACATTTCTGGTTCAGTTAGCANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN GGTTGCTAGGCTGAGGAGCAGCTAGCTGCTGCCTGAGCTTCAGATGGCAA |
| mm3_intergenic_Gm15998|Efna3_chr3_89320929 |
TCTCACGATTTATGGGGCCGCGGATGCCGCAGTGAGAGAGCCGGGGAGTCCGGGCGCAGCGGCAACAAAGGCCCGGGAAG CGGGGCGGGGGCGGCAGCGGCCTCCTGGTCCGGTGTGCGCCGCCTCCTACCTCCGTCGGT |
| mm4_exon_Tmem82_chr4_141618102 |
GGGAGGGACTAGGAAAGGGTCAAAGGCCTGGGGGCGGGGCCGGGGAGACAGCTGCCTTAGATCTTCCAGGTTGCTGGATT CAGTGGCACT |
| mm4_exon_Anpep_chr7_79842096 |
CATCTACAGCAGGGGTGGTGGTTGCGGTGGTGGCTGAGGTGCTGCCCGGGAGCGTGGGGGCTGTGGCAGAGTTCTCTGCA TTCCTATTCTTCTCCTGAGCGTAGACCACCGACAGAGCTATGATGGTACACACAGCTGCC |
| mm4_intergenic_Gm24338|Ppp2r3a_chr9_101251415 |
TCCTGTTAACGAGTTCCCGGCCCGGGCGTCCCGCGAGGTGGGAGGCGCCGGCCATCCGGCCCCCTGGCCTCCTCCGCGGA GCTCCCGGGCCACCGTTCTCCACGGCCGCCAGCCCCGGGAGTCCTCTGGCGTGG |
| mm4_intergenic_Ccne1|Gm22203_chr7_38128470 |
TAGTCATAGGCCTGGGAGCTGGTGTCCAGCTGGCCCCACCCACCACTCTCCCTGGCTTGTGGTATCCCGTGAGTGTGTAG AGGCCAG |
| mm4_intergenic_AC124326.1|Mir802_chr16_93087459 |
AGGCTACAATGTGGCGAGAGGCTCAGCCTGATTCCTCTAGCCTGGGAGCGGGGTGGGGTGGGCTGCCCTTCTGAGGTATG CAGAATATAAATGCTCTCATTTGGTAAGACAGGGAGACTGGGACA |
| mm4_intergenic_Gm5356|Gm26331_chr8_89242210 |
GCAGTGGCTTTTGAACCGAGAAATGGAACAAGGTGTTAGATTNNNNNNNNNNNNNNNNNNNNNNAGGGAAGGCTGTAACT AGTGGGCTTAATCCTGTCCAGTTAGCCAGGGAACACC |
| mm4_exon_Phf1_chr17_26933422 |
CTTTGGCTGCTGCGTCATACGCCCCAGAGCCGCCAGGACGGAGGGGCTGGGCCCGGGGACCCCCTGGCCTCCGCCTGCAC GCCCCCCGGCGCTCACACTCAGTCTTCCC |
| mm4_intergenic_Metap1|Eif4e_chr3_138489657 |
CTGACAGCCACGCCCTCTCCGCGCACGCGTAGTGGCGACCCGCCCGGCAGCCTTTACGCCGCCTCCCCTGCCCCGCCCCA AGGCTTGCGGTGGCGGCGACGCCACGTGGGGTCAGCGGAGATCCTACAC |
| mm4_exon_Drap1_chr19_5424797 |
TTCTTGCTTGGCATCTCGGGGCCTCTCGTTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNACCCTCCCCGGGTCCTGGTGCCGTTTACTCC |
| mm4_intron_Ccdc33_chr9_58113454 |
CCGTAGCAGGTGGAAGCTTTGAAAGACCAGAGAAGCAGGTCGGCACGGAAGGACGGGGGACAACAAAGAGGTGCCCAGGC CTCCCTCCCCACCCTTCCAGGCCAGCCCCCTGAGAGTGAATGGGCAG |
| mm4_intergenic_Gm23624|4930593C16Rik_chr9_120846292 |
ATCCCAGATAGCCCAAGGGTANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNTGCTTGGCCATAGTGTGGACTGTGGCCA |
| mm4_intergenic_Gm14236|Gm24327_chr2_168034059 |
GCTCCCTTTCGCTGTCCTTCTCCTCCCCCACCCCGTTCCCAGGCTTGCTCGACAGAACGAAGCCAGAGGCCAGGCTGAGA TAGCCTCAAGGCCAGACACTAAGATAAGAGCACCTGCAGCCAGCAGCCTACAGAAAGCT |
| mm3_intergenic_Rragc|Gm12916_chr4_124291608 |
CCCCGTTGTCCTTGAGTGAGTCTTTCCTTTTAGCCTCCCCCCCCCCGCCCCCCGGATCTGAAGGCAAGCTAAAAAACCAA AATCCAAAGTTTCTCATTTCTCAGATACCCACTTATCATTTGCATCCCCACCTCC |
| mm4_intron_Chd6_chr2_161017889 |
CCTCGCAGTTCCAGGTTACAAATTCCATGTTATTTTAGTGCTTTCTAGCCTCCCCCCCAACCCCCCCAGGGAATCAATCT GTGGCACAAAGGATGTGGATGTGCACAAGGCCATGGGATACT |
| mm4_intergenic_Kcnc4|Slc6a17_chr3_107459057 | CTTCTGCGGAGTGGCTCTGCCCCTGCCTCCCCCCCAACCCCCCCGGGGCGCGGAGCAGGAAGAGTTGGCTT |
| mm4_intergenic_Gm23186|Arid1b_chr17_4763300 |
AACAGGCAGAAGCAACCTGTATGGACCTGGGGGGGTGGGGGGGGAGGGTAAGCTTTCTTTAAAGTCTTGAGTGCCTGAAG AGGAGAAACCTGTGGAACCAGGCCTCTTTC |
| mm3_intron_Sez6_chr11_77931461 |
TCCACTCCAGGCGTCTAGGGGCGCCCGGGCGCGTTGCGGGGGGGGCGGCAGGTCGCGGGTGCAGAGTCCGGACAGCCCAG CTACCAGCCCGCCGTTCTGCCTACCCCGCTGGTCTCCAAACTTCGCTCGA |
| mm4_intergenic_Gm26626|Runx1_chr16_92634574 |
TGCTCACCCATATGCATCCCCCCCACCTCCCCCCCCCCGCCCCCTGGAGAAAGATGTATGGGGAGATGGGGAGTGTCAGG CACTATGAAAAAGAAGGAGTGGCCCACC |
| mm4_intergenic_Spty2d1|Tmem86a_chr7_47008600 |
GCGAGAGAGGGTTTCAGTGTGAGATCCGGGGAGGGTGGGGTGGGAGGGGGGGGGGTGGAGAAGAAGAGAGACCCGACCCC CTTCTAGAGCTGGGCTCTGTAGGTGTCACGCGTGGATGTACAGA |
| mm4_intergenic_Gm5616|Rexo2_chr9_48468338 |
ACGTGGTGGAGAGTGGTCTATCCCAGAGCTTGTTAGCTGGGTAATGATGAGCCCAAATCTTACAACCTAGCTCCTCCCCC TCCACTCTCACGGGTAAAGCAAAAGAAATTTAAGTTTACTCCCTGTTCGAAACACACG |
| mm4_intergenic_Elk3|mmu-mir-7688_chr10_93376680 |
TCGGAGTCAACATTCCCCAACGAATAGAGTAACTTCAAGGGTGTGATGATAAAAACAGAGATCGGACTGAATTCTGTCTC CAGGGAGCGGGGGGGGGGGGACAGAAATACAAAGGCAACTCAGGACAAGAGA |
| mm4_intergenic_Smug1|Cbx5_chr15_103177359 |
AGGCTCGTCCCATCCAATTGCTCCCCTCCCCCGCCCCGCCCTCCGGGATCCCAGGAAAGGCTGTGATAAGAATGAGACGG ATTCTCCACTGGCCCTGATCCCTCTACAGA |
| mm4_intron_Tiam1_chr16_89832645 |
ACCGAGGAAAAGGAGCAAGGCGGGGCAGACTCCGGGGAGCGAGACGGAGAAGGCTAAAGTACGATTCAGCATGCCAGGAT CTGATGCGATC |
| mm4_exon_Frmd4a_chr2_4601199 |
TTACAGTCGCCACACAAGGGACTCCCTCCTCGGCCACCTTCATCACACAACAGGCCTCCTCCCCCACAGTCCCTGGAGGG ACTCAGGCAGCTGCACTATCAC |
| mm4_intergenic_Thbs4|Mtx3_chr13_92794858 |
CCCGCGCTTTATGGTCCANNNNNNNNNNNNNNNNNNNNNNNNAGGGTGCGGGGGAGGACCGAGTCAGGGCGGCCCCCTTG GCCAGGATCCCCCATTTGCCAGGAAGAGC |
| mm4_intergenic_4930445N18Rik|Zfp516_chr18_82873952 |
GAGCCAACAGAGCTGACACTTGTCCAGTCTAGACCTTGTGGTCCCCTGGGGGCGGGGGGGGGGAGGGGGGGCATGGGGCA TTCCTGTGGAGGTAA |
| mm3_intergenic_Prima1|Fam181a_chr12_103242696 |
GGAAAACAGACGTGAGCGGAGCCAGAGCCTCGCCCGCCTCCCTCCCGGGCTGCACTCCCGCCCGCGCTCCCCGCTGCCGC GGCCGCCAGCGCCGCTGCAGTGATTCCTCGTCT |
| mm4_exon_Myo16_chr8_10634659 |
TGTCTTTCTGCCCACTGTCCGTGAGTTCTGAGCAGTGGCTCCACCAGCCATCTGCCACCTCCCCCGCCCCGCCCCTTGGA CTTGTTCATTCATTTCCGCCATTGCC |
| mm4_intergenic_Gm23752|Gm24815_chr12_7171843 |
ACGGAATGCTCCAGTCCTTGACCAATGCTCTGTATTGAAACTCCAGCCTCTCCCCCCTCCCCCCCCACCCTCCAGGGTCT CTTTGCCTAACTCTGTCTCTCACCATCTCCCA |
| mm4_intron_Spata21_chr4_141097164 |
CCAACCCTGTCCAGCTCTTCAGCTAAGCCAGGGAGCNNNNNNNNNNNNNNNNNNNNAGCCAGCGCAGCCCATGTGCAGAG ATTAGGAGCGG |
| mm4_intergenic_Gm10782|Slc25a48_chr13_56432662 |
GCTCCAGCCCATCAGTATCCTGCCCCACCAGGGAGCAAAGGACTGCTGATCANNNNNNNNNNNNNNNNNNNNGCTCCCAG GCCACTGCGCAGGCGTACCGTGGCTCCGCGCCATCTTCCCACTTGCTA |
| mm4_intergenic_Crispld2|Gm15684_chr8_120041715 |
GCGCTATGTGATGGGCCTAGTGAATCCTGTAAGTCTCAGGAGCTTCCTAAGCCTTGTAAGGCTCATTTCTNNNNNNNNNN NNNNNNNNNNNAGGAGGGAAAGTTGTGATTGGGAATCAAAAGCTACAGCAAAGCGGC |
| mm4_intron_Nedd4_chr9_72662662 |
GTTCATCGTGGCGAGGGGTGGCCGGGGTGGGTAGCGGGGGTGGCGGGCGATCGGGGCCCGAATTTGGCCCCGCGCTCCGG AGCGGGGCAGGCGGTGAGGGGGAGATGGAGAGAGGCG |
| mm4_intron_Osbpl8_chr10_111165438 |
AGCGGTACAAAGCCCAGTGGGGACCTGGGATGGGGGCGGGGGCGGCTCGGCGGCGTTCCGGGTCCCGAGTGTGTCTGCCC CTCCCGAAGTTTGACAG |
| mm4_intergenic_Gm11650|Cacng4_chr11_107794160 |
TTCTTTGTGTCTCGCGTGGAGCCAGCGCCGCGCCCACCCCTCCCCCGGCCCACTCCCCGGGGCAANNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNTGGGGGTAGGGGTCCTACCTTCGATGCAA |
| mm4_intergenic_Adamts6|Cwc27_chr13_104510294 |
GAGGGACAGATGTGGCTTCCCCGGTCAGCGTCCTCTGCTGGAGGGAAGGAGACACCAGACACCCCTGACGCGTGGTGGGG GAGGCTCACCCCTGGGGCTCTGCCATCTGGACACTGG |
| mm4_intergenic_Tacc3|Fgfr3_chr5_33689460 |
TGGGCAAATTCAGAAGGGCTGGGGGCTCTTGTCAGGCCTGGGAACGATGCGGGGGTGGCCATGGGGTGCGGCCAGGGCGG ATCCATCCAGGGCTGGACTCAAGGGACTC |
| mm4_intron_Mpped1_chr15_83846661 |
ACACCAGGATCCAGGTTCCTTCTCGCACAATGGGCACACTCTGCCCCTCCCCCCCAACCCTCCCCCGCCTCCCACCCTGG GCTGGCTGGCTCCTGAGAGGGTGAGGATGATTAGCCAGGGGC |
| mm4_exon_Anks1b_chr10_90829454 |
GAGCTCGTGGGGATCCGGCGCCTCTCCCACCACCCTCGCCGGCGCGCTCCCTCCTCTCCCTCGCTTGCTCACGTTCACTG GAGGGGGCTCTGCGGGGAGGAGGGGGAAGATGCTTAGAGGCGACGGCTAAGG |
| mm4_intron_Afg3l1_chr8_123478077 |
CTGTGGCATTGCTCTGCAGGTGAGCAGGGCAGCGCTGGGGCCACGGGTTCCGGGCGGCGTGGCGGGGGCCGCGCTGGGCG TCGCGGTGACGTCATCGGCCTGCGGCTGGGCCGGGCGCAGCGTCTTCCCGATTTCTGCCT |
| mm4_exon_Pcolce_chr5_137610682 |
CAGTCCAAGGACCACGGAAAGTGGGGCTAGGCAACCGCCCCGTCTCTCCATCCCCTAGAGGCTCCACCCCCACGCTGCCA GGAATTCCGGGAATCCTTCTCAGTCCCCCTAACCTCCTCTACCCC |
| mm4_intron_Slitrk2_chrX_66652911 |
CACTCACAGGGAAGGGAAGCGTCTGCCCCACCCTCCCCCACCAAGCGCCCTGGATACACTGCCCACACTCCTCTCCTCCG TGACGTCACCCCTAGTCCTGTCCCGAGGAGCCTGCAAAACCTCT |
| mm4_intron_Elf2_chr3_51276961 |
CGACTCCCCAACTTAGCCGCGGCTCCGCGCCCGGCCCCTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTCTCCCC GGAGCGACAGCCCGGATCCGAGGCAGGTTACTC |
| mm3_exon_Snx27_chr3_94582441 |
ATTCGGACTTGACAATGCGCACGACCCGCGGGCCGCCGCCTCCCCCGCCACCGTTCCCGGCGCAGTGGAGCCCAGACCCC CCGCCGCCGCCTCCATTCCGGTGCGGGGCTGAGGGGTGAATACCTTCCCCGTCCTCGT |
| mm4_intergenic_Gpr108|Trip10_chr17_57248622 |
GGCGGAGAAAGCACCTACAGCCAGGGAGAGTGGGGTGGGAGCCAACAGGGCCTCTTCCCTTTTATCCGGGAGCCTTAAGG GGGTTTACAAGGCGTGAAAGGACTTTTATGATTGGGAGGACCCGAAATCCTAAGCCCCAG |
| mm4_intron_Gm11100_chr14_13937637 |
GTGGACAGATCCCAGTGTGGCCAGCACCAGGAGCACTCACCTGTGTTGTGCCTCCCCCACCACTCACCTTGGCATTATGC TATGAAATGTTTCTTGTTTCCAAAACATGTATATCCCGCTGTTCTCTCTTGTT |
| mm4_intron_Mrpl48_chr7_100572247 |
CAGGCTTCAGCTCCAGTTCAGGCTCCCAAAGGTGTCCAGGCTCTTTTAAGGGCCCCAGGGGGCTGGGGGGGGGAGGCTTC TATCTGCCAATGTGAAGACAGATGGACTGCTCTGACACACC |
| mm4_intron_Bmp6_chr13_38394704 |
GGTAGAGTCCAGGTGCCATGCAGCCCCCCCCCCCCAGCTCCCTGGGTTTGAGGCCTGATTGTGTAGGATTGGTCTTCCAT GCCCTGGAGACAGCTGCCAAGCTAGTGTGGTGGGTT |
| mm3_intron_Jarid2_chr13_44730343 |
CTCCAACCCCTCGCTGACANNNNNNNNNNNNNNNNNNNNNNNNACGCTCCGAGGCCTTTCCCCCGGGAAGCCTGGCGGCT TGCCCTCGCGGGCCCGCGGGCGCGCTCTCGCGCGCCGATTCCTCGATTCCACAGGCG |
| mm4_exon_Diras1_chr10_81019769 |
GTCCCCAGCACCAGAGATGCCTGGGCAGGTTGGCCAGCAGCCAGGGTGGGCTCCGGCCTCCCCTGCCACCCAGCCCGGTT CTCCCCAGGATGGGCAAGGCCAGCCAGGAGAAG |
| mm4_intron_Sirt1_chr10_63339100 |
CTCGGCTGCGGGAGATTTAAACCCCGTCACGTGACCCGCCCCTCCCCGCCCCCGCGCCTCTCCCGCCACCCACGCGGGCC GGACCACAACACGCCGGGTCAC |
| mm4_intergenic_Nrg3|Gm10713_chr14_39473278 |
TGTGTGCGCTCCAGCCTCGCCGGCATCCTCGGTGCGCCGCGCCCGGCCCGCTCCCTGGGGCGTCCGGCCGCACCGCCGCT GTCCCCACCTCAAATCCTCACGT |
| mm4_intron_Nrg2_chr18_36037082 |
GCCAAGGCAGTGATAAGGGTGTAAGATCTGACCTGGGGGGGGGGGGGGGGAGGCAGAGGCAGGAAAGCCTGGTCAAGACC |
| mm4_intron_Klf10_chr15_38299855 |
TCTGCAGGCTCCCAGACGTGCGGCGCCCACAGCACGGGCTCCAGGCGCGCGGCCCCACGGTTCCCGCCTCGACACGCGGC CCCCGCGTCTCGCGGTCCCGACTCCCCCGCCAAGCTGTCGGGCTCCAAGGCAGGACCCTG |
| mm3_intergenic_Asphd2|Sez6l_chr5_112395407 | TCCTTGGAACAGTGCATGGGCGTTCTGGGAGCGTGGGGTGGGATGCCAGCCCACAGCCCATCTGTGTCTGTCCTC |
| mm4_exon_Arl4c_chr1_88702220 |
TCTAGTCCCGCCCACAGGCCACGCCCCTCGCCCGCCACGCCCCGCGGTCTCCCGGGGTCAGGCGGGGTCTTCTCGGTCGG TTGCGTCTTTTCGCGCGCTCCGATCGTTCGAAACTCGCCCA |
| mm4_intron_Crtac1_chr19_42310505 |
CCTCACCTGCTTCCTGGAAAAACCACCCACATCTAGGAAGCCTCACCAGCCACGGGCCCTGGATGCTGGCAATTGTTAAG ATACCCCACAAAGAACTAATGCAGATTCTCACAAGCTGCTGGAGT |
| mm4_intergenic_AY702102|A630075F10Rik_chr2_169997009 | TCATTACTGGAGGCGAGGGACCTGGGCGGGTGGCGGGGTAGGGGTGGCTCTGGGAAGAGAGAGGA |
| mm4_exon_Cacnb4_chr2_52676381 |
CGTACGAGGACGACATGGTTCAGAGGCGCCGCATGGCCCTCGCAGCGCGGTGGGCGGAGGGCGCGGGCCGGTGCGGGTGG AGGGGGAGGCAGGACTTCCCTACCCGGCTCCT |
| mm4_intergenic_Pard3b|Gm11610_chr1_62441938 |
GGCCAGGCATTTCAACACTCACAGATTGAGGACCACGGAGGGTGGAGGTGGAGGCTAACCGTGTGGTGTTGTTCCCAACC CTGGAGTACTGG |
| mm4_exon_Inpp5a_chr7_139389380 |
CCACCCAGTCCAGAGCCCGCTCCGCCCGGGCACCATGGCGGGGAAGGCGGCCGCCCCCGGCACCGCGGTCCTGCTGGTCA CGGCCAACGTGGGCTCGCTCTTCGACGACGTAAGTGCC |
| mm4_intergenic_Ccne1|Gm22203_chr7_38130150 |
GGCCTCTTCAACAGACTGCTAATGGGAAATGGCCCATGAGGCTCCCCTGCCACGCGGCCTGGGGCACACGCAGGAGTTAT TAAATAATACGGCCGCGTGGAGAGCAGGATCGAGC |
| mm4_intron_Sh3glb1_chr3_144719804 |
GGTGAACCCAAGGTGTCCGCCCTGGGCCGCGTCCCGACTCGCCTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNAGCGAG GCGGAAACGGCCAGCGGGGCAGGGGCGCCAGGCCGCGCCCATCGGCAGGCCTGGGTA |
| mm4_intron_Adamtsl3_chr7_82396989 |
TCCTGTGAAGAGGACTGGGTTCTCCCCGAGGATTCATAAGGAAGCTGCTCCTGGCAGCGGGGGGGGGGGGGCTGAGCTCT CCCAGGACACAAGAGAGGCCAG |
| mm4_exon_Plod2_chr9_92542467 |
CGTCTCGCGAGAAGTCCTCGCCACAGGCCTTCGGCTCCCGGGTTCAGGGGCGGATGGGGGACCGCGGAGCGAGGCCGGGG CGGCTGATGCCCATGCTCGCCCTGCTCTC |
| mm4_exon_Tfap2c_chr2_172549709 |
CACATCTCTGTGCACAGCCACCGATGCGCGTCCAGTGACTGGGACAGCAANNNNNNNNNNNNNNNNNNNNNNNNNNNNAG ACGCCTGGCCACCGTGACCCCGATTGTGGATTTACCGCTCGGG |
| mm4_exon_Foxc1_chr13_31807917 |
GCGCATCCAGGACATCAAGACGGAGAACGGTACGTGTCCCTCGCCTCCCCAGCCCCTGTCCCCGGCTGCCGCCCTAGGCA GCGGCAGCGCCGCCACAGTGCCCAAAATCGAGAGCCCCGACAG |
| mm4_exon_Rsbn1_chr3_103914878 |
GTCCCGGGCCCTGTTGAANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNGGCACCTCGGCCCTCTTCACCTTCTCGCCTC |
| mm4_intergenic_Gm14060|Btbd3_chr2_138468354 |
AGCTGACCAACCAACTCCAGTACGGGCCCCACTGCCTCCCCCGCCCCTGACCCCGGCGGCAGAAGGGCGATCCCCCCGGG GGTCTTTAAACCTCCACTCCGGACCGCGACAGCTAGGTAC |
| mm4_intron_Slit1_chr19_41685610 |
CCCTGCCCAATTAACACCCTAGAGGATGCCAGCAAGCAGCTGCCTCGGCAGCCAGGCTCCCTGGGGAGGGGGGCCCAGGT GTTCCTGCCTCCTCTTC |
| mm4_intron_Mrvi1_chr7_110963006 |
CAGTTCCCACCCCAGCTTCCCACTCCAGCCTCCCACCCCAGCCTCCCACCCCAGCCTCCCAGGGTTTGGCTTTTCAGATT CCATACAACAGCTTTTAGACTTTCAACTCCCTCAAGTGCTGGCCTCTATCTCCTGA |
| mm4_intron_Dapp1_chr3_137977797 |
GGAGGAGTAGACCTAGCCGTTCCCAGAGCTGAGCCTCCCCTGCCTGGTTCCCTGGGCCTGCCCTGTTAGTCCTTACACCT CCACAACAAATAGGGCTTTGTTTTTCTTCTCCTTTGAGGCCCCCTGATGCACTGAAGAGG |
| mm4_intergenic_n-R5s30|Rbfox1_chr16_5495572 | AGGGTTCCAGGTTAGGGTCATCCCAGGGAGCCTGGAAGGGGAGGGTTATAAGAGCCACTCCTCAGGATGAAAGGGGC |
| mm4_intergenic_Pabpc6|Qk_chr17_9928012 |
ACCCTAAGCTGTTTCCCGTCTCTTTTGAAAGCTTCCCCAGCCAGCCAGCACCTCACTTGCAGGGCCCAGGGAGCCTTGTG GGGGAGGAGGACTGGGGGTGGGGGAGCCCCAGGAAGCTGGTGCGTCCTCCAGAGAGCAAA |
| mm4_intergenic_En1|B230209K01Rik_chr1_120942147 |
TGTGTGCAATGAATTCACAGAACAACTAACCTGAGAGCCTGGAGGGGGATGCTCGCCCACCAAAAATCTCACTGGAGTCC CCCACTGTGCATCCTAACCCTCCAACAGAAGCCAG |
| mm4_exon_Pcbp1_chr6_86525964 |
TCACGTTGAGTCCGCTTTCAGTCACACCGGCGTCCATGGCGAGCGGCGGGCGGCGTTCGGGAGTTGGGCTCGTTACGTGG TCAAGTCCTGGGCGGCTGGCGGGGGAGGGGAGGAGTAGGCCCGAACTG |