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Contents:In the table below, Illumina Nextera Handle sequences have been added and highlighted in bold. Primers for the on-target have been added for convenience. The table below is sorted by the CFD off-target score. Sites with very low CFD scores < 0.02 are unlikely to be cleaved, see our study Haeussler et al. 2016, Figure 2.
In the protocol by Matthew Canver, Harvard, two PCRs are run: one PCR to amplify the potential off-target, then a second PCR to extend the handles with Illumina barcodes. Please click here to download the protocol. Alternatively, you can have a look at Fu et al, 2014.
If a primer was not found, the reason is usually that the region around the off-target is too repetitive. To avoid unspecific primers, all repeats are masked for the primer design (not for off-target search). If you think that we should change the parameters here or should use different primer3 settings, please let us know.
| Name | Primer Sequence | Tm | CFD Score |
|---|---|---|---|
| ontarget_mm0_exon_5730457N03Rik/Evx1_chr6_52313855_F | Primer3: not found at this Tm | N.d. | 1.00 |
| ontarget_mm0_exon_5730457N03Rik/Evx1_chr6_52313855_R | Primer3: not found at this Tm | N.d. | 1.00 |
| mm3_intergenic_Gm3307|Otud7a_chr7_63614814_F | TCGTCGGCAGCGTCACTCAAAGTTGGCCCCTAATGA | 59.6 | 0.68 |
| mm3_intergenic_Gm3307|Otud7a_chr7_63614814_R | GTCTCGTGGGCTCGGTGTTGTAAGCTTCTTGGCTCTG | 58.8 | 0.68 |
| mm4_intergenic_Cd274|Pdcd1lg2_chr19_29400397_F | TCGTCGGCAGCGTCTGCAGACCCTTGTAAGTGGA | 58.5 | 0.65 |
| mm4_intergenic_Cd274|Pdcd1lg2_chr19_29400397_R | GTCTCGTGGGCTCGGGAAAGCTTTGGATCAGGCCAC | 59.7 | 0.65 |
| mm4_intergenic_Tmc1|Zfand5_chr19_21074030_F | TCGTCGGCAGCGTCTCAGAGAAATGGAGGAGAAACC | 57.4 | 0.59 |
| mm4_intergenic_Tmc1|Zfand5_chr19_21074030_R | GTCTCGTGGGCTCGGTCCCAGAAAACAAATTCTTCCCA | 58.4 | 0.59 |
| mm4_intron_Dnah8_chr17_30793736_F | TCGTCGGCAGCGTCTGTGAGCCATTAGAGATGTGAA | 57.1 | 0.53 |
| mm4_intron_Dnah8_chr17_30793736_R | GTCTCGTGGGCTCGGTCCAACACGTCTGACAACTGT | 59.7 | 0.53 |
| mm4_intergenic_Gm26235|Gm25392_chr18_18578527_F | TCGTCGGCAGCGTCAGCATTAAATGTGGCTTCATGCA | 59.8 | 0.46 |
| mm4_intergenic_Gm26235|Gm25392_chr18_18578527_R | GTCTCGTGGGCTCGGAGGGAAGAATTAAGAGGTAAGCAA | 57.6 | 0.46 |
| mm4_intergenic_Gm13191|Frmd4a_chr2_3970891_F | Primer3: not found at this Tm | N.d. | 0.45 |
| mm4_intergenic_Gm13191|Frmd4a_chr2_3970891_R | Primer3: not found at this Tm | N.d. | 0.45 |
| mm4_intergenic_1700003H04Rik|Gm23673_chr3_124614934_F | Primer3: not found at this Tm | N.d. | 0.43 |
| mm4_intergenic_1700003H04Rik|Gm23673_chr3_124614934_R | Primer3: not found at this Tm | N.d. | 0.43 |
| mm4_intergenic_Gm24601|Gm26501_chr6_95000924_F | Primer3: not found at this Tm | N.d. | 0.40 |
| mm4_intergenic_Gm24601|Gm26501_chr6_95000924_R | Primer3: not found at this Tm | N.d. | 0.40 |
| mm4_intergenic_Ifng|Dyrk2/4932442E05Rik_chr10_118712062_F | Primer3: not found at this Tm | N.d. | 0.38 |
| mm4_intergenic_Ifng|Dyrk2/4932442E05Rik_chr10_118712062_R | Primer3: not found at this Tm | N.d. | 0.38 |
| mm4_intergenic_Gm25715|N6amt1_chr16_86945902_F | TCGTCGGCAGCGTCTGGGAAGTTCCACGTTCATGA | 59.5 | 0.37 |
| mm4_intergenic_Gm25715|N6amt1_chr16_86945902_R | GTCTCGTGGGCTCGGGGGGACTGGGTCTGATAAGA | 57.8 | 0.37 |
| mm4_intron_Tmem229b_chr12_78989660_F | TCGTCGGCAGCGTCTCTCTTCCCAGGATCAGGTGA | 59.6 | 0.36 |
| mm4_intron_Tmem229b_chr12_78989660_R | GTCTCGTGGGCTCGGAGGTACATTGTGACCAGGCA | 58.9 | 0.36 |
| mm4_exon_Vta1_chr10_14684120_F | Primer3: not found at this Tm | N.d. | 0.33 |
| mm4_exon_Vta1_chr10_14684120_R | Primer3: not found at this Tm | N.d. | 0.33 |
| mm3_intergenic_Gm23342|Myt1l_chr12_29326735_F | TCGTCGGCAGCGTCCTGATCAAGAGCAGCACGTT | 58.5 | 0.33 |
| mm3_intergenic_Gm23342|Myt1l_chr12_29326735_R | GTCTCGTGGGCTCGGGCAGGATATACACTGGCCCC | 59.9 | 0.33 |
| mm4_intergenic_RP24-399L6.2|9230113P08Rik_chr9_35864710_F | TCGTCGGCAGCGTCAGTGTCAGGAGCCAACAAGT | 59.1 | 0.32 |
| mm4_intergenic_RP24-399L6.2|9230113P08Rik_chr9_35864710_R | GTCTCGTGGGCTCGGTCCAAGATCCCACCTCTTCCT | 59.9 | 0.32 |
| mm4_intergenic_Gm11279|Gm11280_chr13_21904803_F | TCGTCGGCAGCGTCTGAAGGATCTCAGGGAGGACT | 59.3 | 0.32 |
| mm4_intergenic_Gm11279|Gm11280_chr13_21904803_R | GTCTCGTGGGCTCGGAGCAGTCCTACTTGTCTGCAC | 59.9 | 0.32 |
| mm4_intron_Wdr48_chr9_119906695_F | TCGTCGGCAGCGTCGAGTGCTAACTCCCCACCTC | 59.4 | 0.31 |
| mm4_intron_Wdr48_chr9_119906695_R | GTCTCGTGGGCTCGGACAACCCAAACCCCAAACAA | 58.3 | 0.31 |
| mm3_intergenic_Gm15696|Senp5_chr16_31975263_F | Primer3: not found at this Tm | N.d. | 0.31 |
| mm3_intergenic_Gm15696|Senp5_chr16_31975263_R | Primer3: not found at this Tm | N.d. | 0.31 |
| mm4_intron_Nrg2_chr18_36030766_F | TCGTCGGCAGCGTCATCAGCTGGGGCCCAAATG | 60.3 | 0.31 |
| mm4_intron_Nrg2_chr18_36030766_R | GTCTCGTGGGCTCGGTGGCACATCCAGAAACACGT | 60.1 | 0.31 |
| mm3_intron_Mtmr1_chrX_71410481_F | Primer3: not found at this Tm | N.d. | 0.30 |
| mm3_intron_Mtmr1_chrX_71410481_R | Primer3: not found at this Tm | N.d. | 0.30 |
| mm4_intergenic_Ccdc85a|2810471M01Rik_chr11_28633770_F | TCGTCGGCAGCGTCCACCTCTGTTGACCTCTGACC | 59.9 | 0.30 |
| mm4_intergenic_Ccdc85a|2810471M01Rik_chr11_28633770_R | GTCTCGTGGGCTCGGCCCACTGCACTACCAAGGAG | 60.0 | 0.30 |
| mm4_intergenic_Gm24905|Traf1_chr2_34921611_F | Primer3: not found at this Tm | N.d. | 0.30 |
| mm4_intergenic_Gm24905|Traf1_chr2_34921611_R | Primer3: not found at this Tm | N.d. | 0.30 |
| mm4_intergenic_Kcnq1|KCNQ1OT1_1_chr7_143243207_F | Primer3: not found at this Tm | N.d. | 0.28 |
| mm4_intergenic_Kcnq1|KCNQ1OT1_1_chr7_143243207_R | Primer3: not found at this Tm | N.d. | 0.28 |
| mm4_intergenic_Tcof1|Arsi_chr18_60895046_F | Primer3: not found at this Tm | N.d. | 0.28 |
| mm4_intergenic_Tcof1|Arsi_chr18_60895046_R | Primer3: not found at this Tm | N.d. | 0.28 |
| mm3_intron_Tecta_chr9_42390265_F | Primer3: not found at this Tm | N.d. | 0.28 |
| mm3_intron_Tecta_chr9_42390265_R | Primer3: not found at this Tm | N.d. | 0.28 |
| mm4_intergenic_mmu-mir-6370|Gm22828_chr6_19605289_F | TCGTCGGCAGCGTCAACGTGGAATAGGAACATGGT | 57.2 | 0.27 |
| mm4_intergenic_mmu-mir-6370|Gm22828_chr6_19605289_R | GTCTCGTGGGCTCGGTCACCATGCATCCACCTCAC | 60.0 | 0.27 |
| mm3_intergenic_Gm26535|Gm24710_chr10_37883313_F | TCGTCGGCAGCGTCATAGTCTCTTTTGAGCAGCTGA | 57.1 | 0.27 |
| mm3_intergenic_Gm26535|Gm24710_chr10_37883313_R | GTCTCGTGGGCTCGGAGATGTTTCTTCTGGGAATGCA | 57.9 | 0.27 |
| mm4_intron_H2-Q6_chr17_35428828_F | TCGTCGGCAGCGTCTATGGCCTGATTGCAGAGGG | 59.5 | 0.26 |
| mm4_intron_H2-Q6_chr17_35428828_R | GTCTCGTGGGCTCGGCACAGGGGATTGTGGGAGTC | 60.0 | 0.26 |
| mm4_intron_H2-Q4_chr17_35383823_F | TCGTCGGCAGCGTCTATGGCCTGATTGCAGAGGG | 59.5 | 0.26 |
| mm4_intron_H2-Q4_chr17_35383823_R | GTCTCGTGGGCTCGGCACAGGGGATTGTGGGAGTC | 60.0 | 0.26 |
| mm4_intron_Mvb12b_chr2_33832707_F | Primer3: not found at this Tm | N.d. | 0.24 |
| mm4_intron_Mvb12b_chr2_33832707_R | Primer3: not found at this Tm | N.d. | 0.24 |
| mm2_intergenic_Alcam|Gm25723_chr16_52596593_F | Primer3: not found at this Tm | N.d. | 0.23 |
| mm2_intergenic_Alcam|Gm25723_chr16_52596593_R | Primer3: not found at this Tm | N.d. | 0.23 |
| mm4_intron_Catsperg2_chr7_29718377_F | Primer3: not found at this Tm | N.d. | 0.23 |
| mm4_intron_Catsperg2_chr7_29718377_R | Primer3: not found at this Tm | N.d. | 0.23 |
| mm4_intergenic_Ednrb|RP24-312G4.2_chr14_104427783_F | TCGTCGGCAGCGTCGCGATAAGGCTTCAGCAAAGT | 59.2 | 0.23 |
| mm4_intergenic_Ednrb|RP24-312G4.2_chr14_104427783_R | GTCTCGTGGGCTCGGAGTCCTACAGTTATGGTCTGCA | 58.5 | 0.23 |
| mm3_intron_Reep5_chr18_34351996_F | Primer3: not found at this Tm | N.d. | 0.23 |
| mm3_intron_Reep5_chr18_34351996_R | Primer3: not found at this Tm | N.d. | 0.23 |
| mm3_intergenic_Dleu2|Gm26969_chr14_62047863_F | Primer3: not found at this Tm | N.d. | 0.23 |
| mm3_intergenic_Dleu2|Gm26969_chr14_62047863_R | Primer3: not found at this Tm | N.d. | 0.23 |
| mm4_intron_Ncoa7_chr10_30761273_F | Primer3: not found at this Tm | N.d. | 0.23 |
| mm4_intron_Ncoa7_chr10_30761273_R | Primer3: not found at this Tm | N.d. | 0.23 |
| mm4_intergenic_Gm25723|Gm22459_chr16_53257551_F | Primer3: not found at this Tm | N.d. | 0.22 |
| mm4_intergenic_Gm25723|Gm22459_chr16_53257551_R | Primer3: not found at this Tm | N.d. | 0.22 |
| mm3_intergenic_Gm23225|Gm24127_chr14_92148520_F | TCGTCGGCAGCGTCGGTATAACCATTTCCTTCTCAATGC | 58.2 | 0.21 |
| mm3_intergenic_Gm23225|Gm24127_chr14_92148520_R | GTCTCGTGGGCTCGGAGAAATCAATTCACAGAGCATGAA | 57.1 | 0.21 |
| mm2_intergenic_Gm25562|AI593442_chr9_52405929_F | Primer3: not found at this Tm | N.d. | 0.21 |
| mm2_intergenic_Gm25562|AI593442_chr9_52405929_R | Primer3: not found at this Tm | N.d. | 0.21 |
| mm4_intergenic_4930480K15Rik|Nrxn1_chr17_90870150_F | TCGTCGGCAGCGTCCCCCATATAGCCTGCAGTTTCT | 59.8 | 0.20 |
| mm4_intergenic_4930480K15Rik|Nrxn1_chr17_90870150_R | GTCTCGTGGGCTCGGAGGCTTGAATCTGCTCTGGT | 59.0 | 0.20 |
| mm4_intron_Edil3_chr13_88860287_F | Primer3: not found at this Tm | N.d. | 0.20 |
| mm4_intron_Edil3_chr13_88860287_R | Primer3: not found at this Tm | N.d. | 0.20 |
| mm4_intergenic_Grik1|Cldn17_chr16_88464276_F | Primer3: not found at this Tm | N.d. | 0.20 |
| mm4_intergenic_Grik1|Cldn17_chr16_88464276_R | Primer3: not found at this Tm | N.d. | 0.20 |
| mm4_intergenic_Rpl31-ps23|Ppp1r3b_chr8_35184128_F | Primer3: not found at this Tm | N.d. | 0.19 |
| mm4_intergenic_Rpl31-ps23|Ppp1r3b_chr8_35184128_R | Primer3: not found at this Tm | N.d. | 0.19 |
| mm4_intergenic_Gm6421|Hcn1_chr13_117399116_F | Primer3: not found at this Tm | N.d. | 0.19 |
| mm4_intergenic_Gm6421|Hcn1_chr13_117399116_R | Primer3: not found at this Tm | N.d. | 0.19 |
| mm4_intron_Zswim2_chr2_83922584_F | Primer3: not found at this Tm | N.d. | 0.19 |
| mm4_intron_Zswim2_chr2_83922584_R | Primer3: not found at this Tm | N.d. | 0.19 |
| mm4_intergenic_Nrg3|Gm10713_chr14_39687638_F | TCGTCGGCAGCGTCAGGCTAGCATTGATGGACAGA | 58.8 | 0.19 |
| mm4_intergenic_Nrg3|Gm10713_chr14_39687638_R | GTCTCGTGGGCTCGGGCTCACTCTGTGTAGCTCTGT | 59.4 | 0.19 |
| mm3_intron_Man1a_chr10_53957815_F | Primer3: not found at this Tm | N.d. | 0.19 |
| mm3_intron_Man1a_chr10_53957815_R | Primer3: not found at this Tm | N.d. | 0.19 |
| mm3_intergenic_A930039A15Rik|Gm25336_chr1_153920158_F | Primer3: not found at this Tm | N.d. | 0.18 |
| mm3_intergenic_A930039A15Rik|Gm25336_chr1_153920158_R | Primer3: not found at this Tm | N.d. | 0.18 |
| mm2_intron_Vstm2a_chr11_16333000_F | Primer3: not found at this Tm | N.d. | 0.18 |
| mm2_intron_Vstm2a_chr11_16333000_R | Primer3: not found at this Tm | N.d. | 0.18 |
| mm4_intron_Tbc1d8_chr1_39396731_F | TCGTCGGCAGCGTCCTTATGCTGCCGGCTTACCT | 60.1 | 0.17 |
| mm4_intron_Tbc1d8_chr1_39396731_R | GTCTCGTGGGCTCGGCATGTGGACAGGAACACCGA | 59.9 | 0.17 |
| mm4_intergenic_1700063H04Rik|Rimklb_chr6_122434199_F | Primer3: not found at this Tm | N.d. | 0.17 |
| mm4_intergenic_1700063H04Rik|Rimklb_chr6_122434199_R | Primer3: not found at this Tm | N.d. | 0.17 |
| mm4_intron_Ptprk_chr10_28354232_F | TCGTCGGCAGCGTCTCAGCTTCTTGGGTGATGGC | 60.3 | 0.17 |
| mm4_intron_Ptprk_chr10_28354232_R | GTCTCGTGGGCTCGGTGAACAACAGTCCTTAATGGGC | 58.8 | 0.17 |
| mm4_intron_Atp8a1_chr5_67742950_F | TCGTCGGCAGCGTCTCTTCCCATGGCACTTTCCA | 59.2 | 0.17 |
| mm4_intron_Atp8a1_chr5_67742950_R | GTCTCGTGGGCTCGGAGAAAGTGTCCTTCCCAGCC | 59.5 | 0.17 |
| mm4_intron_Pcdh9_chr14_93432676_F | Primer3: not found at this Tm | N.d. | 0.16 |
| mm4_intron_Pcdh9_chr14_93432676_R | Primer3: not found at this Tm | N.d. | 0.16 |
| mm3_intron_Rnf216_chr5_143074093_F | Primer3: not found at this Tm | N.d. | 0.16 |
| mm3_intron_Rnf216_chr5_143074093_R | Primer3: not found at this Tm | N.d. | 0.16 |
| mm4_intergenic_Gm6031|Ube2v2_chr16_15455014_F | Primer3: not found at this Tm | N.d. | 0.15 |
| mm4_intergenic_Gm6031|Ube2v2_chr16_15455014_R | Primer3: not found at this Tm | N.d. | 0.15 |
| mm3_intron_Jak1_chr4_101189210_F | TCGTCGGCAGCGTCGGCGAAGAGGTTGTGACAGA | 59.9 | 0.15 |
| mm3_intron_Jak1_chr4_101189210_R | GTCTCGTGGGCTCGGTGGGAACAGATGGCCAAGTG | 60.2 | 0.15 |
| mm4_intergenic_Gm22116|Slc35f4_chr14_49521992_F | Primer3: not found at this Tm | N.d. | 0.15 |
| mm4_intergenic_Gm22116|Slc35f4_chr14_49521992_R | Primer3: not found at this Tm | N.d. | 0.15 |
| mm4_intergenic_Gm24298|4921513I03Rik_chr10_120657602_F | Primer3: not found at this Tm | N.d. | 0.15 |
| mm4_intergenic_Gm24298|4921513I03Rik_chr10_120657602_R | Primer3: not found at this Tm | N.d. | 0.15 |
| mm4_intron_Enox1_chr14_77386221_F | Primer3: not found at this Tm | N.d. | 0.15 |
| mm4_intron_Enox1_chr14_77386221_R | Primer3: not found at this Tm | N.d. | 0.15 |
| mm4_intergenic_5S_rRNA|Cops8_chr1_90573178_F | TCGTCGGCAGCGTCGCCATCGTGACAGGTGACAT | 60.3 | 0.14 |
| mm4_intergenic_5S_rRNA|Cops8_chr1_90573178_R | GTCTCGTGGGCTCGGAGCACACACACCCTTGGATT | 59.8 | 0.14 |
| mm4_exon_Ubr2_chr17_46968382_F | Primer3: not found at this Tm | N.d. | 0.14 |
| mm4_exon_Ubr2_chr17_46968382_R | Primer3: not found at this Tm | N.d. | 0.14 |
| mm4_intergenic_Gm20698/Vmn2r7/Gm26939|Vmn2r7/Gm26939_chr3_64780153_F | TCGTCGGCAGCGTCTGAAGGTTTCATAAACTTTAGGAGG | 57.0 | 0.14 |
| mm4_intergenic_Gm20698/Vmn2r7/Gm26939|Vmn2r7/Gm26939_chr3_64780153_R | GTCTCGTGGGCTCGGTCATAGAGGACAGAATGTAGCAGA | 58.5 | 0.14 |
| mm4_exon_Bche_chr3_73701266_F | Primer3: not found at this Tm | N.d. | 0.14 |
| mm4_exon_Bche_chr3_73701266_R | Primer3: not found at this Tm | N.d. | 0.14 |
| mm4_intergenic_2810055G20Rik|Gm11146_chr16_77564451_F | TCGTCGGCAGCGTCAGTCGCCACTTACATTACTAACA | 57.6 | 0.14 |
| mm4_intergenic_2810055G20Rik|Gm11146_chr16_77564451_R | GTCTCGTGGGCTCGGAGACCTTCAATGTGAACGAGAT | 57.4 | 0.14 |
| mm4_intron_Spred2_chr11_19958037_F | Primer3: not found at this Tm | N.d. | 0.14 |
| mm4_intron_Spred2_chr11_19958037_R | Primer3: not found at this Tm | N.d. | 0.14 |
| mm4_intergenic_Gimap3|Tmem176b_chr6_48782100_F | TCGTCGGCAGCGTCGGAACACGCATCCCTGTTGA | 60.6 | 0.13 |
| mm4_intergenic_Gimap3|Tmem176b_chr6_48782100_R | GTCTCGTGGGCTCGGTGAAAGTGTATGTGATGCATTGGT | 59.2 | 0.13 |
| mm4_intergenic_Gm26250|Gm11819_chr4_13274246_F | Primer3: not found at this Tm | N.d. | 0.13 |
| mm4_intergenic_Gm26250|Gm11819_chr4_13274246_R | Primer3: not found at this Tm | N.d. | 0.13 |
| mm4_intergenic_Ttc8|Rpl30-ps8_chr12_99021720_F | Primer3: not found at this Tm | N.d. | 0.13 |
| mm4_intergenic_Ttc8|Rpl30-ps8_chr12_99021720_R | Primer3: not found at this Tm | N.d. | 0.13 |
| mm4_intergenic_Gm22735|5930412G12Rik_chr5_128457561_F | Primer3: not found at this Tm | N.d. | 0.12 |
| mm4_intergenic_Gm22735|5930412G12Rik_chr5_128457561_R | Primer3: not found at this Tm | N.d. | 0.12 |
| mm4_intergenic_Kcnk1|Slc35f3_chr8_126122363_F | Primer3: not found at this Tm | N.d. | 0.12 |
| mm4_intergenic_Kcnk1|Slc35f3_chr8_126122363_R | Primer3: not found at this Tm | N.d. | 0.12 |
| mm4_intergenic_Gm24246|Pik3c3_chr18_29785027_F | TCGTCGGCAGCGTCGGTAGGTCTTGTCAGGGTGC | 60.0 | 0.12 |
| mm4_intergenic_Gm24246|Pik3c3_chr18_29785027_R | GTCTCGTGGGCTCGGTTGTTCAGGCCTCCTTGACC | 59.8 | 0.12 |
| mm4_intron_Xkr4_chr1_3352572_F | Primer3: not found at this Tm | N.d. | 0.12 |
| mm4_intron_Xkr4_chr1_3352572_R | Primer3: not found at this Tm | N.d. | 0.12 |
| mm4_intergenic_Slk|Gm16068_chr19_47583728_F | Primer3: not found at this Tm | N.d. | 0.12 |
| mm4_intergenic_Slk|Gm16068_chr19_47583728_R | Primer3: not found at this Tm | N.d. | 0.12 |
| mm4_intergenic_mmu-mir-6344|Irs1/Gm9747_chr1_82204713_F | TCGTCGGCAGCGTCAGCAGTGGTTGGTAAGTGCC | 60.5 | 0.11 |
| mm4_intergenic_mmu-mir-6344|Irs1/Gm9747_chr1_82204713_R | GTCTCGTGGGCTCGGTGTCTCACTAGTTGCCGACA | 58.6 | 0.11 |
| mm4_intergenic_Wdr75|Gm5526_chr1_45841739_F | Primer3: not found at this Tm | N.d. | 0.11 |
| mm4_intergenic_Wdr75|Gm5526_chr1_45841739_R | Primer3: not found at this Tm | N.d. | 0.11 |
| mm4_intergenic_Prkca|Gm11655_chr11_108066049_F | Primer3: not found at this Tm | N.d. | 0.11 |
| mm4_intergenic_Prkca|Gm11655_chr11_108066049_R | Primer3: not found at this Tm | N.d. | 0.11 |
| mm4_intergenic_Gm27034|Rpl36a-ps1_chr14_98954014_F | Primer3: not found at this Tm | N.d. | 0.11 |
| mm4_intergenic_Gm27034|Rpl36a-ps1_chr14_98954014_R | Primer3: not found at this Tm | N.d. | 0.11 |
| mm4_intergenic_Gm8730|Cdh5_chr8_103714788_F | Primer3: not found at this Tm | N.d. | 0.11 |
| mm4_intergenic_Gm8730|Cdh5_chr8_103714788_R | Primer3: not found at this Tm | N.d. | 0.11 |
| mm4_intergenic_Gm5913|Gm7191_chr8_97443335_F | Primer3: not found at this Tm | N.d. | 0.11 |
| mm4_intergenic_Gm5913|Gm7191_chr8_97443335_R | Primer3: not found at this Tm | N.d. | 0.11 |
| mm4_intergenic_Dab1|Gm12719_chr4_103824348_F | Primer3: not found at this Tm | N.d. | 0.11 |
| mm4_intergenic_Dab1|Gm12719_chr4_103824348_R | Primer3: not found at this Tm | N.d. | 0.11 |
| mm4_intron_Tectb_chr19_55185828_F | TCGTCGGCAGCGTCTGGGTGTTTCCAAAGCAACA | 58.4 | 0.11 |
| mm4_intron_Tectb_chr19_55185828_R | GTCTCGTGGGCTCGGGCTTAGACTCTGGGCTTCCC | 59.8 | 0.11 |
| mm4_intron_Slc6a3_chr13_73541000_F | Primer3: not found at this Tm | N.d. | 0.11 |
| mm4_intron_Slc6a3_chr13_73541000_R | Primer3: not found at this Tm | N.d. | 0.11 |
| mm4_intergenic_Lrrtm1|Ctnna2_chr6_77271533_F | TCGTCGGCAGCGTCAGCACTACCTTGGAATTCCTACT | 58.8 | 0.10 |
| mm4_intergenic_Lrrtm1|Ctnna2_chr6_77271533_R | GTCTCGTGGGCTCGGTCACGCTCATCTTCTCCCCT | 60.3 | 0.10 |
| mm4_intron_Ppp1r7_chr1_93353112_F | TCGTCGGCAGCGTCCCCAGTAAACAGGGCTAGCC | 60.1 | 0.10 |
| mm4_intron_Ppp1r7_chr1_93353112_R | GTCTCGTGGGCTCGGTCCCATTCTGACCCATGGTT | 58.6 | 0.10 |
| mm4_intergenic_Atp9b|Sall3_chr18_80941962_F | TCGTCGGCAGCGTCGGAGGGGCAGCAATTACTCA | 59.7 | 0.10 |
| mm4_intergenic_Atp9b|Sall3_chr18_80941962_R | GTCTCGTGGGCTCGGTGGAATGAATCAGGGCAGGG | 59.7 | 0.10 |
| mm4_intron_Thsd7b_chr1_129565713_F | Primer3: not found at this Tm | N.d. | 0.10 |
| mm4_intron_Thsd7b_chr1_129565713_R | Primer3: not found at this Tm | N.d. | 0.10 |
| mm4_intron_Angpt4_chr2_151921024_F | TCGTCGGCAGCGTCTGTGCTGGCAAGTTTCTTCT | 57.9 | 0.10 |
| mm4_intron_Angpt4_chr2_151921024_R | GTCTCGTGGGCTCGGCCTGTGGTGGGTGTGTGTAA | 59.8 | 0.10 |
| mm4_intron_Tcf12_chr9_71855392_F | Primer3: not found at this Tm | N.d. | 0.10 |
| mm4_intron_Tcf12_chr9_71855392_R | Primer3: not found at this Tm | N.d. | 0.10 |
| mm4_intergenic_Gm25235|Atf6_chr1_170833044_F | TCGTCGGCAGCGTCTGGCCAAAACATCCACACCT | 60.1 | 0.10 |
| mm4_intergenic_Gm25235|Atf6_chr1_170833044_R | GTCTCGTGGGCTCGGGTGGGGCTCTCAGGATTCAG | 59.8 | 0.10 |
| mm4_intergenic_Gm14980|Pcdh19_chrX_133451663_F | Primer3: not found at this Tm | N.d. | 0.09 |
| mm4_intergenic_Gm14980|Pcdh19_chrX_133451663_R | Primer3: not found at this Tm | N.d. | 0.09 |
| mm4_intergenic_Adc|Ak2_chr4_128974314_F | Primer3: not found at this Tm | N.d. | 0.09 |
| mm4_intergenic_Adc|Ak2_chr4_128974314_R | Primer3: not found at this Tm | N.d. | 0.09 |
| mm4_intron_Ptpn11_chr5_121186170_F | Primer3: not found at this Tm | N.d. | 0.09 |
| mm4_intron_Ptpn11_chr5_121186170_R | Primer3: not found at this Tm | N.d. | 0.09 |
| mm4_intergenic_Qpct|Cdc42ep3_chr17_79139730_F | TCGTCGGCAGCGTCTCTGGCTCTCTGGTAGGCAA | 60.2 | 0.09 |
| mm4_intergenic_Qpct|Cdc42ep3_chr17_79139730_R | GTCTCGTGGGCTCGGCCCCACTACATCATCTACCCC | 59.0 | 0.09 |
| mm4_intergenic_Gm25974|Epha4_chr1_77260382_F | Primer3: not found at this Tm | N.d. | 0.09 |
| mm4_intergenic_Gm25974|Epha4_chr1_77260382_R | Primer3: not found at this Tm | N.d. | 0.09 |
| mm4_intergenic_PCA3_1|Prune2_chr19_17070736_F | TCGTCGGCAGCGTCTGGAAACAGAGAGGGAAATTACA | 57.4 | 0.09 |
| mm4_intergenic_PCA3_1|Prune2_chr19_17070736_R | GTCTCGTGGGCTCGGTTCACTGATAGAATGGCTACCTT | 57.0 | 0.09 |
| mm4_intergenic_Lrp1b|Gm24350_chr2_42753590_F | Primer3: not found at this Tm | N.d. | 0.09 |
| mm4_intergenic_Lrp1b|Gm24350_chr2_42753590_R | Primer3: not found at this Tm | N.d. | 0.09 |
| mm4_intergenic_Gm26235|Gm25392_chr18_19395436_F | Primer3: not found at this Tm | N.d. | 0.09 |
| mm4_intergenic_Gm26235|Gm25392_chr18_19395436_R | Primer3: not found at this Tm | N.d. | 0.09 |
| mm4_intergenic_Gm16013|9230020A06Rik_chr11_71490149_F | Primer3: not found at this Tm | N.d. | 0.09 |
| mm4_intergenic_Gm16013|9230020A06Rik_chr11_71490149_R | Primer3: not found at this Tm | N.d. | 0.09 |
| mm4_intergenic_Gm9603|Gm3373_chr14_5694933_F | Primer3: not found at this Tm | N.d. | 0.09 |
| mm4_intergenic_Gm9603|Gm3373_chr14_5694933_R | Primer3: not found at this Tm | N.d. | 0.09 |
| mm4_intergenic_Gm8356|Gm3629_chr14_6544769_F | TCGTCGGCAGCGTCTGTCTTGACTTGTCTGTGACCA | 59.5 | 0.09 |
| mm4_intergenic_Gm8356|Gm3629_chr14_6544769_R | GTCTCGTGGGCTCGGCGGAGATCCAGATCAGTGCC | 59.9 | 0.09 |
| mm4_intergenic_Gm8265|Gm9603_chr14_5644424_F | Primer3: not found at this Tm | N.d. | 0.09 |
| mm4_intergenic_Gm8265|Gm9603_chr14_5644424_R | Primer3: not found at this Tm | N.d. | 0.09 |
| mm4_intergenic_Gm6356|Gm10406_chr14_6981004_F | TCGTCGGCAGCGTCGTCTGAACTGTGTCAGGCCT | 59.6 | 0.09 |
| mm4_intergenic_Gm6356|Gm10406_chr14_6981004_R | GTCTCGTGGGCTCGGTGCCTAGGGTACAGAAAGCC | 59.0 | 0.09 |
| mm4_intergenic_Gm3542|Gm17126_chr14_5342386_F | TCGTCGGCAGCGTCTGTCTTGACTTGTCTGTGACCA | 59.5 | 0.09 |
| mm4_intergenic_Gm3542|Gm17126_chr14_5342386_R | GTCTCGTGGGCTCGGCGGAGATCCAGATCAGTGCC | 59.9 | 0.09 |
| mm4_intergenic_Gm3500|Gm3194_chr14_5407009_F | Primer3: not found at this Tm | N.d. | 0.09 |
| mm4_intergenic_Gm3500|Gm3194_chr14_5407009_R | Primer3: not found at this Tm | N.d. | 0.09 |
| mm4_intergenic_Gm3373|Gm26557_chr14_5759555_F | TCGTCGGCAGCGTCTGTCTTGACTTGTCTGTGACCA | 59.5 | 0.09 |
| mm4_intergenic_Gm3373|Gm26557_chr14_5759555_R | GTCTCGTGGGCTCGGCGGAGATCCAGATCAGTGCC | 59.9 | 0.09 |
| mm4_intergenic_Gm3339|Gm3542_chr14_5291910_F | Primer3: not found at this Tm | N.d. | 0.09 |
| mm4_intergenic_Gm3339|Gm3542_chr14_5291910_R | Primer3: not found at this Tm | N.d. | 0.09 |
| mm4_intergenic_Gm17223|Gm10413_chr14_3387992_F | TCGTCGGCAGCGTCCGGAGATCCAGATCAGTGCC | 59.9 | 0.09 |
| mm4_intergenic_Gm17223|Gm10413_chr14_3387992_R | GTCTCGTGGGCTCGGAGGGGTCTTTGTCTTGACTTGT | 59.4 | 0.09 |
| mm4_intergenic_Gm17221|Gm17188_chr14_3181071_F | TCGTCGGCAGCGTCCGGAGATCCAGATCAGTGCC | 59.9 | 0.09 |
| mm4_intergenic_Gm17221|Gm17188_chr14_3181071_R | GTCTCGTGGGCTCGGAGGGGTCTTTGTCTTGACTTGT | 59.4 | 0.09 |
| mm4_intergenic_Gm17107|Gm3012_chr14_3627393_F | Primer3: not found at this Tm | N.d. | 0.09 |
| mm4_intergenic_Gm17107|Gm3012_chr14_3627393_R | Primer3: not found at this Tm | N.d. | 0.09 |
| mm4_intergenic_Gm17069|Gm8279_chr14_5124367_F | Primer3: not found at this Tm | N.d. | 0.09 |
| mm4_intergenic_Gm17069|Gm8279_chr14_5124367_R | Primer3: not found at this Tm | N.d. | 0.09 |
| mm4_intergenic_Gm17051|Gm10340_chr14_3122338_F | Primer3: not found at this Tm | N.d. | 0.09 |
| mm4_intergenic_Gm17051|Gm10340_chr14_3122338_R | Primer3: not found at this Tm | N.d. | 0.09 |
| mm4_intergenic_Gm11107|Gm3115_chr14_4072370_F | TCGTCGGCAGCGTCCGGAGATCCAGATCAGTGCC | 59.9 | 0.09 |
| mm4_intergenic_Gm11107|Gm3115_chr14_4072370_R | GTCTCGTGGGCTCGGCAGGCCTTTTACTAGGGGTCT | 58.8 | 0.09 |
| mm4_intergenic_Gm11105|Gm3138_chr14_4242069_F | TCGTCGGCAGCGTCCGGAGATCCAGATCAGTGCC | 59.9 | 0.09 |
| mm4_intergenic_Gm11105|Gm3138_chr14_4242069_R | GTCTCGTGGGCTCGGTGTCTTGACTTGTCTGTGACCA | 59.5 | 0.09 |
| mm4_intergenic_Gm10338|Gm10128_chr14_7602707_F | Primer3: not found at this Tm | N.d. | 0.09 |
| mm4_intergenic_Gm10338|Gm10128_chr14_7602707_R | Primer3: not found at this Tm | N.d. | 0.09 |
| mm4_intergenic_Gap|Gm2888_chr14_3023099_F | TCGTCGGCAGCGTCCGGAGATCCAGATCAGTGCC | 59.9 | 0.09 |
| mm4_intergenic_Gap|Gm2888_chr14_3023099_R | GTCTCGTGGGCTCGGAGGGGTCTTTGTCTTGACTTGT | 59.4 | 0.09 |
| mm4_intergenic_4933406F09Rik|Gm3558_chr14_7513260_F | Primer3: not found at this Tm | N.d. | 0.09 |
| mm4_intergenic_4933406F09Rik|Gm3558_chr14_7513260_R | Primer3: not found at this Tm | N.d. | 0.09 |
| mm4_intergenic_Gm5105|1110002E22Rik/Gm5105_chr3_138061533_F | TCGTCGGCAGCGTCGGTTTGCCTTCTGTGAACGG | 59.6 | 0.09 |
| mm4_intergenic_Gm5105|1110002E22Rik/Gm5105_chr3_138061533_R | GTCTCGTGGGCTCGGGAAGAACGAAGGCCAGACCA | 59.9 | 0.09 |
| mm3_intergenic_Olfr576|Olfr578_chr7_102976242_F | TCGTCGGCAGCGTCAGGGCACACTACAACTCGAA | 58.9 | 0.08 |
| mm3_intergenic_Olfr576|Olfr578_chr7_102976242_R | GTCTCGTGGGCTCGGCTCTCCAGTTAAGTCTGCCTCC | 59.8 | 0.08 |
| mm4_intergenic_Gm25258|Hao1_chr2_133670554_F | Primer3: not found at this Tm | N.d. | 0.08 |
| mm4_intergenic_Gm25258|Hao1_chr2_133670554_R | Primer3: not found at this Tm | N.d. | 0.08 |
| mm4_intergenic_Gm5641|Gm26678_chr3_54579127_F | TCGTCGGCAGCGTCTGTTGTTTCTTCTGTGTTCCTACT | 58.2 | 0.08 |
| mm4_intergenic_Gm5641|Gm26678_chr3_54579127_R | GTCTCGTGGGCTCGGTCACAAATATCACTTACCAACCTGA | 58.2 | 0.08 |
| mm4_intergenic_Gm25434|Rergl_chr6_139466643_F | TCGTCGGCAGCGTCCCAAAGACCACTTGCATGCA | 59.3 | 0.08 |
| mm4_intergenic_Gm25434|Rergl_chr6_139466643_R | GTCTCGTGGGCTCGGGCAAAGACTTGGGAAGGGTTC | 59.3 | 0.08 |
| mm4_intergenic_Gm27037|Gm23859_chr18_89954897_F | Primer3: not found at this Tm | N.d. | 0.08 |
| mm4_intergenic_Gm27037|Gm23859_chr18_89954897_R | Primer3: not found at this Tm | N.d. | 0.08 |
| mm4_intron_Ncam1_chr9_49697711_F | TCGTCGGCAGCGTCGTCTGTGCTCTGACCCCTTC | 60.0 | 0.08 |
| mm4_intron_Ncam1_chr9_49697711_R | GTCTCGTGGGCTCGGTGGGGATATTCTTATGAAGTAGCC | 57.6 | 0.08 |
| mm4_intergenic_Megf9|Gm11227_chr4_70721682_F | TCGTCGGCAGCGTCGGGCACTTGTATTCTCCCACA | 59.9 | 0.08 |
| mm4_intergenic_Megf9|Gm11227_chr4_70721682_R | GTCTCGTGGGCTCGGAGCATCTGAAAATGTGTTGCCT | 59.1 | 0.08 |
| mm4_intron_Gpr39_chr1_125768322_F | Primer3: not found at this Tm | N.d. | 0.07 |
| mm4_intron_Gpr39_chr1_125768322_R | Primer3: not found at this Tm | N.d. | 0.07 |
| mm4_intron_Khdrbs2_chr1_32406170_F | Primer3: not found at this Tm | N.d. | 0.07 |
| mm4_intron_Khdrbs2_chr1_32406170_R | Primer3: not found at this Tm | N.d. | 0.07 |
| mm3_intron_Nell1_chr7_50853281_F | Primer3: not found at this Tm | N.d. | 0.07 |
| mm3_intron_Nell1_chr7_50853281_R | Primer3: not found at this Tm | N.d. | 0.07 |
| mm4_intergenic_Smg6|Gm12333/Smg6_chr11_75030015_F | Primer3: not found at this Tm | N.d. | 0.06 |
| mm4_intergenic_Smg6|Gm12333/Smg6_chr11_75030015_R | Primer3: not found at this Tm | N.d. | 0.06 |
| mm4_intergenic_1700061I17Rik|D3Bwg0562e/Gm22408_chr3_117084777_F | Primer3: not found at this Tm | N.d. | 0.06 |
| mm4_intergenic_1700061I17Rik|D3Bwg0562e/Gm22408_chr3_117084777_R | Primer3: not found at this Tm | N.d. | 0.06 |
| mm4_intron_5430435G22Rik_chr1_131695319_F | Primer3: not found at this Tm | N.d. | 0.06 |
| mm4_intron_5430435G22Rik_chr1_131695319_R | Primer3: not found at this Tm | N.d. | 0.06 |
| mm4_intergenic_Cabp5|Bsph1_chr7_13427790_F | Primer3: not found at this Tm | N.d. | 0.06 |
| mm4_intergenic_Cabp5|Bsph1_chr7_13427790_R | Primer3: not found at this Tm | N.d. | 0.06 |
| mm4_intergenic_Zfp451|Gm15455_chr1_33831036_F | Primer3: not found at this Tm | N.d. | 0.06 |
| mm4_intergenic_Zfp451|Gm15455_chr1_33831036_R | Primer3: not found at this Tm | N.d. | 0.06 |
| mm4_intergenic_Glra2|Gm15236_chrX_165520262_F | Primer3: not found at this Tm | N.d. | 0.06 |
| mm4_intergenic_Glra2|Gm15236_chrX_165520262_R | Primer3: not found at this Tm | N.d. | 0.06 |
| mm4_intron_Spon1_chr7_113827975_F | TCGTCGGCAGCGTCAGGAGCTGAAAGATGCCACA | 59.3 | 0.06 |
| mm4_intron_Spon1_chr7_113827975_R | GTCTCGTGGGCTCGGCGGGCTCCCTTTGTTGACTT | 60.5 | 0.06 |
| mm4_intergenic_Mir128-1|R3hdm1_chr1_128210609_F | Primer3: not found at this Tm | N.d. | 0.06 |
| mm4_intergenic_Mir128-1|R3hdm1_chr1_128210609_R | Primer3: not found at this Tm | N.d. | 0.06 |
| mm4_intergenic_Ap3b1|Tbca_chr13_94653125_F | Primer3: not found at this Tm | N.d. | 0.06 |
| mm4_intergenic_Ap3b1|Tbca_chr13_94653125_R | Primer3: not found at this Tm | N.d. | 0.06 |
| mm4_intergenic_Gm12026|Gm12027_chr11_19454226_F | TCGTCGGCAGCGTCGGGACTTCATGAGTGAGGGC | 60.1 | 0.06 |
| mm4_intergenic_Gm12026|Gm12027_chr11_19454226_R | GTCTCGTGGGCTCGGCCGGTGCTCACTAACCACTT | 59.9 | 0.06 |
| mm4_intergenic_Gm22327|Zfand3_chr17_29985544_F | TCGTCGGCAGCGTCTTCGAATCCACGACCTCACC | 59.7 | 0.05 |
| mm4_intergenic_Gm22327|Zfand3_chr17_29985544_R | GTCTCGTGGGCTCGGCAGAAGAAAGCCTGGCCAGA | 59.9 | 0.05 |
| mm3_intron_Ank2_chr3_127480376_F | Primer3: not found at this Tm | N.d. | 0.05 |
| mm3_intron_Ank2_chr3_127480376_R | Primer3: not found at this Tm | N.d. | 0.05 |
| mm3_exon_Mrpl32_chr13_14610685_F | Primer3: not found at this Tm | N.d. | 0.05 |
| mm3_exon_Mrpl32_chr13_14610685_R | Primer3: not found at this Tm | N.d. | 0.05 |
| mm3_exon_Gm6578_chr6_12099905_F | TCGTCGGCAGCGTCTTTGTCGTCTCCTGGCGTAC | 60.0 | 0.05 |
| mm3_exon_Gm6578_chr6_12099905_R | GTCTCGTGGGCTCGGCCGATGTAGGAGAGGAAACCC | 59.5 | 0.05 |
| mm3_exon_Cntn3_chr6_102164003_F | TCGTCGGCAGCGTCGCCATGTCTTCCACAGTCCT | 59.6 | 0.05 |
| mm3_exon_Cntn3_chr6_102164003_R | GTCTCGTGGGCTCGGCAGGCAGCCTTTTCCATTCC | 59.4 | 0.05 |
| mm4_intergenic_Gm22937|1700049L16Rik_chr10_71952383_F | Primer3: not found at this Tm | N.d. | 0.05 |
| mm4_intergenic_Gm22937|1700049L16Rik_chr10_71952383_R | Primer3: not found at this Tm | N.d. | 0.05 |
| mm3_intron_Col17a1_chr19_47684306_F | TCGTCGGCAGCGTCATGTGTGTGGGAGGAGGGAT | 60.2 | 0.05 |
| mm3_intron_Col17a1_chr19_47684306_R | GTCTCGTGGGCTCGGTCATGTGGAGGGCAGGGATA | 60.0 | 0.05 |
| mm4_intron_Ahdc1_chr4_133050869_F | TCGTCGGCAGCGTCGGGTGGGATGCCATGTCTAG | 59.8 | 0.05 |
| mm4_intron_Ahdc1_chr4_133050869_R | GTCTCGTGGGCTCGGCGCCATGGGAGAAGTCTCTT | 59.4 | 0.05 |
| mm4_intron_A230071N21Rik_chr7_112527649_F | TCGTCGGCAGCGTCGTGGTCATGTCATGGAGCCA | 60.0 | 0.05 |
| mm4_intron_A230071N21Rik_chr7_112527649_R | GTCTCGTGGGCTCGGACAGAGCAGTAAGGAACAGACT | 58.7 | 0.05 |
| mm4_intron_Gm15155_chrX_156186531_F | Primer3: not found at this Tm | N.d. | 0.05 |
| mm4_intron_Gm15155_chrX_156186531_R | Primer3: not found at this Tm | N.d. | 0.05 |
| mm4_intron_4930556M19Rik_chr15_10736219_F | TCGTCGGCAGCGTCCCCAACGAAGGATCTGGTTACA | 60.0 | 0.05 |
| mm4_intron_4930556M19Rik_chr15_10736219_R | GTCTCGTGGGCTCGGAGGGATGCGAAGTGTTTGGA | 59.6 | 0.05 |
| mm4_intergenic_Gm12702|Ror1_chr4_100070538_F | Primer3: not found at this Tm | N.d. | 0.05 |
| mm4_intergenic_Gm12702|Ror1_chr4_100070538_R | Primer3: not found at this Tm | N.d. | 0.05 |
| mm4_intergenic_Gm25923|Gm25564_chr12_28325579_F | Primer3: not found at this Tm | N.d. | 0.05 |
| mm4_intergenic_Gm25923|Gm25564_chr12_28325579_R | Primer3: not found at this Tm | N.d. | 0.05 |
| mm3_intergenic_Gm23745|Gm24177_chr4_53979284_F | Primer3: not found at this Tm | N.d. | 0.05 |
| mm3_intergenic_Gm23745|Gm24177_chr4_53979284_R | Primer3: not found at this Tm | N.d. | 0.05 |
| mm4_intergenic_Gm25602|Tbc1d32_chr10_55057347_F | Primer3: not found at this Tm | N.d. | 0.05 |
| mm4_intergenic_Gm25602|Tbc1d32_chr10_55057347_R | Primer3: not found at this Tm | N.d. | 0.05 |
| mm4_intergenic_Gm22183|mmu-mir-378d_chr10_126100846_F | Primer3: not found at this Tm | N.d. | 0.04 |
| mm4_intergenic_Gm22183|mmu-mir-378d_chr10_126100846_R | Primer3: not found at this Tm | N.d. | 0.04 |
| mm3_intergenic_AC166333.1|Scg2_chr1_79153746_F | Primer3: not found at this Tm | N.d. | 0.04 |
| mm3_intergenic_AC166333.1|Scg2_chr1_79153746_R | Primer3: not found at this Tm | N.d. | 0.04 |
| mm4_intron_Disp1_chr1_183117541_F | Primer3: not found at this Tm | N.d. | 0.04 |
| mm4_intron_Disp1_chr1_183117541_R | Primer3: not found at this Tm | N.d. | 0.04 |
| mm3_intergenic_Robo1|Gm25699_chr16_73389541_F | TCGTCGGCAGCGTCTGCTTTCTGATGAGGTGAACTGA | 59.9 | 0.04 |
| mm3_intergenic_Robo1|Gm25699_chr16_73389541_R | GTCTCGTGGGCTCGGACAATACACTACCTGGCTCTACT | 58.3 | 0.04 |
| mm4_intergenic_Gm8805|Crygf_chr1_65725868_F | TCGTCGGCAGCGTCTGTGCATTGAGGAAGTCTCTCT | 59.0 | 0.04 |
| mm4_intergenic_Gm8805|Crygf_chr1_65725868_R | GTCTCGTGGGCTCGGAAGTAAACACTAACCTGTAGCCA | 57.4 | 0.04 |
| mm4_intron_Diap3_chr14_86726916_F | TCGTCGGCAGCGTCTGTCAAGATTGGAGAAGTGAAGA | 57.4 | 0.04 |
| mm4_intron_Diap3_chr14_86726916_R | GTCTCGTGGGCTCGGCCCCTTTCCTAGAGTCCTCTCA | 60.0 | 0.04 |
| mm4_intergenic_Ces5a|Gm26843_chr8_93602267_F | Primer3: not found at this Tm | N.d. | 0.04 |
| mm4_intergenic_Ces5a|Gm26843_chr8_93602267_R | Primer3: not found at this Tm | N.d. | 0.04 |
| mm4_intergenic_Poteg|Gm1698_chr8_27548647_F | TCGTCGGCAGCGTCGCTTGTCTTGAAGGGCATGC | 60.1 | 0.04 |
| mm4_intergenic_Poteg|Gm1698_chr8_27548647_R | GTCTCGTGGGCTCGGAGGAGTTGCACAGAGATTTCCT | 59.3 | 0.04 |
| mm4_intron_Dcc_chr18_71898460_F | Primer3: not found at this Tm | N.d. | 0.04 |
| mm4_intron_Dcc_chr18_71898460_R | Primer3: not found at this Tm | N.d. | 0.04 |
| mm4_intron_Lama2_chr10_27281504_F | Primer3: not found at this Tm | N.d. | 0.04 |
| mm4_intron_Lama2_chr10_27281504_R | Primer3: not found at this Tm | N.d. | 0.04 |
| mm4_intergenic_Bbs9|Bmper_chr9_23145779_F | TCGTCGGCAGCGTCGGGGCATAGGAATGACACACT | 59.7 | 0.04 |
| mm4_intergenic_Bbs9|Bmper_chr9_23145779_R | GTCTCGTGGGCTCGGCCTCCAAAATGAACATGGCCC | 59.7 | 0.04 |
| mm4_exon_Ap2a2_chr7_141631708_F | TCGTCGGCAGCGTCGCCACTGGCTCAATCTCAGA | 59.7 | 0.04 |
| mm4_exon_Ap2a2_chr7_141631708_R | GTCTCGTGGGCTCGGGACACTGCCTAGCCCATGAG | 60.1 | 0.04 |
| mm4_exon_Matn4_chr2_164389783_F | TCGTCGGCAGCGTCCTCAGAGATCCCTTCACCCG | 59.2 | 0.04 |
| mm4_exon_Matn4_chr2_164389783_R | GTCTCGTGGGCTCGGGAAAGCCTCGTGGAGTTCCA | 59.9 | 0.04 |
| mm4_intergenic_Npsr1|Gm10701_chr9_24332976_F | Primer3: not found at this Tm | N.d. | 0.04 |
| mm4_intergenic_Npsr1|Gm10701_chr9_24332976_R | Primer3: not found at this Tm | N.d. | 0.04 |
| mm3_intergenic_Gm11850|Gm11849_chr4_17063909_F | Primer3: not found at this Tm | N.d. | 0.03 |
| mm3_intergenic_Gm11850|Gm11849_chr4_17063909_R | Primer3: not found at this Tm | N.d. | 0.03 |
| mm4_intergenic_Gm12468|Gm23745_chr4_53889063_F | Primer3: not found at this Tm | N.d. | 0.03 |
| mm4_intergenic_Gm12468|Gm23745_chr4_53889063_R | Primer3: not found at this Tm | N.d. | 0.03 |
| mm4_intergenic_Gm23339|Gm25570_chr6_105248042_F | Primer3: not found at this Tm | N.d. | 0.03 |
| mm4_intergenic_Gm23339|Gm25570_chr6_105248042_R | Primer3: not found at this Tm | N.d. | 0.03 |
| mm4_intergenic_Gm7091|Vsig1_chrX_140871959_F | Primer3: not found at this Tm | N.d. | 0.03 |
| mm4_intergenic_Gm7091|Vsig1_chrX_140871959_R | Primer3: not found at this Tm | N.d. | 0.03 |
| mm3_intergenic_Gm25985|Gm6404_chr13_115440290_F | Primer3: not found at this Tm | N.d. | 0.03 |
| mm3_intergenic_Gm25985|Gm6404_chr13_115440290_R | Primer3: not found at this Tm | N.d. | 0.03 |
| mm4_intergenic_Trhr|Gm24903_chr15_44264699_F | Primer3: not found at this Tm | N.d. | 0.03 |
| mm4_intergenic_Trhr|Gm24903_chr15_44264699_R | Primer3: not found at this Tm | N.d. | 0.03 |
| mm4_intergenic_Prpf19|Zp1_chr19_10910417_F | TCGTCGGCAGCGTCAATAACAGCCACAAAGGGCA | 57.9 | 0.03 |
| mm4_intergenic_Prpf19|Zp1_chr19_10910417_R | GTCTCGTGGGCTCGGCGGGGTTCCTTCATGCTTCA | 60.3 | 0.03 |
| mm4_intergenic_Ctnna3|Gm22829_chr10_65677992_F | Primer3: not found at this Tm | N.d. | 0.02 |
| mm4_intergenic_Ctnna3|Gm22829_chr10_65677992_R | Primer3: not found at this Tm | N.d. | 0.02 |
| mm4_intergenic_Msr1|Fgf20_chr8_39671356_F | Primer3: not found at this Tm | N.d. | 0.02 |
| mm4_intergenic_Msr1|Fgf20_chr8_39671356_R | Primer3: not found at this Tm | N.d. | 0.02 |
| mm4_intergenic_Nrp1|Gm26002_chr8_128650858_F | Primer3: not found at this Tm | N.d. | 0.02 |
| mm4_intergenic_Nrp1|Gm26002_chr8_128650858_R | Primer3: not found at this Tm | N.d. | 0.02 |
| mm4_intergenic_Crp|Gm24817_chr1_172757952_F | Primer3: not found at this Tm | N.d. | 0.02 |
| mm4_intergenic_Crp|Gm24817_chr1_172757952_R | Primer3: not found at this Tm | N.d. | 0.02 |
| mm4_intron_Gas7_chr11_67516235_F | TCGTCGGCAGCGTCAGCCTTCTGTGGAATCGCTC | 60.1 | 0.02 |
| mm4_intron_Gas7_chr11_67516235_R | GTCTCGTGGGCTCGGGCTGCATGAACCTGAGTCCA | 60.3 | 0.02 |
| mm4_intergenic_5S_rRNA|Gm10649_chr8_76627640_F | Primer3: not found at this Tm | N.d. | 0.02 |
| mm4_intergenic_5S_rRNA|Gm10649_chr8_76627640_R | Primer3: not found at this Tm | N.d. | 0.02 |
| mm4_intergenic_Gm23203|Gm23447_chr17_59657621_F | Primer3: not found at this Tm | N.d. | 0.02 |
| mm4_intergenic_Gm23203|Gm23447_chr17_59657621_R | Primer3: not found at this Tm | N.d. | 0.02 |
| mm4_intron_Tbc1d4_chr14_101540221_F | Primer3: not found at this Tm | N.d. | 0.02 |
| mm4_intron_Tbc1d4_chr14_101540221_R | Primer3: not found at this Tm | N.d. | 0.02 |
| mm4_intergenic_Gm5976|Tmem194b_chr1_52547245_F | TCGTCGGCAGCGTCAGGGCTTGGGAGAGTTCTACT | 59.9 | 0.02 |
| mm4_intergenic_Gm5976|Tmem194b_chr1_52547245_R | GTCTCGTGGGCTCGGGCCATGGCTGAAGAGGTCTT | 60.0 | 0.02 |
| mm4_intergenic_Gm14631|Gm25023_chrX_57783115_F | Primer3: not found at this Tm | N.d. | 0.02 |
| mm4_intergenic_Gm14631|Gm25023_chrX_57783115_R | Primer3: not found at this Tm | N.d. | 0.02 |
| mm3_intergenic_Zic4|Gm26101_chr9_91592804_F | Primer3: not found at this Tm | N.d. | 0.02 |
| mm3_intergenic_Zic4|Gm26101_chr9_91592804_R | Primer3: not found at this Tm | N.d. | 0.02 |
| mm4_intergenic_Gm23526|Grik4_chr9_42933357_F | Primer3: not found at this Tm | N.d. | 0.02 |
| mm4_intergenic_Gm23526|Grik4_chr9_42933357_R | Primer3: not found at this Tm | N.d. | 0.02 |
| mm4_intergenic_Gm16477|Gpr26_chr7_131896789_F | TCGTCGGCAGCGTCCCCATAGTGTCATGACCATGGT | 59.8 | 0.02 |
| mm4_intergenic_Gm16477|Gpr26_chr7_131896789_R | GTCTCGTGGGCTCGGTGTTGCCAACAAAATCACCAA | 57.3 | 0.02 |
| mm4_intergenic_Gm14809|Gm14812_chrX_99427019_F | Primer3: not found at this Tm | N.d. | 0.01 |
| mm4_intergenic_Gm14809|Gm14812_chrX_99427019_R | Primer3: not found at this Tm | N.d. | 0.01 |
| mm3_intergenic_Nrcam|Stxbp6_chr12_44638821_F | TCGTCGGCAGCGTCTTGGCAGGGTTCAGCTCATT | 59.8 | 0.01 |
| mm3_intergenic_Nrcam|Stxbp6_chr12_44638821_R | GTCTCGTGGGCTCGGGTCACAGAATCAGATCCTTCGC | 59.1 | 0.01 |
| mm4_intergenic_Ttc32|Gm7099_chr12_9192537_F | TCGTCGGCAGCGTCGCACCGTGGACTTTGGGTAA | 60.5 | 0.01 |
| mm4_intergenic_Ttc32|Gm7099_chr12_9192537_R | GTCTCGTGGGCTCGGTCCCTACATCCAGGTCCCAG | 60.0 | 0.01 |
| mm4_intergenic_Gm22289|Gm22373_chr7_59917578_F | Primer3: not found at this Tm | N.d. | 0.01 |
| mm4_intergenic_Gm22289|Gm22373_chr7_59917578_R | Primer3: not found at this Tm | N.d. | 0.01 |
| mm4_intergenic_Gm23464|S100a2_chr3_90562004_F | TCGTCGGCAGCGTCGCCACTGCCTGGTATGTTCA | 60.3 | 0.01 |
| mm4_intergenic_Gm23464|S100a2_chr3_90562004_R | GTCTCGTGGGCTCGGATCACAGGTGCTTGCATCCA | 59.9 | 0.01 |
| mm3_intergenic_Lmo1|Stk33_chr7_109211235_F | Primer3: not found at this Tm | N.d. | 0.01 |
| mm3_intergenic_Lmo1|Stk33_chr7_109211235_R | Primer3: not found at this Tm | N.d. | 0.01 |
| mm4_intergenic_Rpl21-ps5|Gm24508_chr16_83614777_F | Primer3: not found at this Tm | N.d. | 0.01 |
| mm4_intergenic_Rpl21-ps5|Gm24508_chr16_83614777_R | Primer3: not found at this Tm | N.d. | 0.01 |
| mm4_intergenic_Prickle1|Adamts20_chr15_94166831_F | Primer3: not found at this Tm | N.d. | 0.01 |
| mm4_intergenic_Prickle1|Adamts20_chr15_94166831_R | Primer3: not found at this Tm | N.d. | 0.01 |
| mm4_intergenic_Gm7488|Tbl1xr1_chr3_21860778_F | Primer3: not found at this Tm | N.d. | 0.01 |
| mm4_intergenic_Gm7488|Tbl1xr1_chr3_21860778_R | Primer3: not found at this Tm | N.d. | 0.01 |
| mm3_intergenic_Arid5b|1700040L02Rik_chr10_68401693_F | TCGTCGGCAGCGTCGTTTGCTTGCGTTGGTAGGG | 60.0 | 0.01 |
| mm3_intergenic_Arid5b|1700040L02Rik_chr10_68401693_R | GTCTCGTGGGCTCGGTCAGGAATGCAGCAAGGGAG | 60.0 | 0.01 |
| mm4_intron_Tfdp2_chr9_96299120_F | Primer3: not found at this Tm | N.d. | 0.01 |
| mm4_intron_Tfdp2_chr9_96299120_R | Primer3: not found at this Tm | N.d. | 0.01 |
| mm4_intergenic_Gm5356|Gm26331_chr8_89245838_F | Primer3: not found at this Tm | N.d. | 0.01 |
| mm4_intergenic_Gm5356|Gm26331_chr8_89245838_R | Primer3: not found at this Tm | N.d. | 0.01 |
| mm4_intron_Nrxn3_chr12_90145376_F | TCGTCGGCAGCGTCTGGAAGATCCACCCGTCTAT | 57.5 | 0.01 |
| mm4_intron_Nrxn3_chr12_90145376_R | GTCTCGTGGGCTCGGACAAGTGTCATTAGCAGACAGGT | 59.9 | 0.01 |
| mm4_intron_Atp8a2_chr14_59672141_F | Primer3: not found at this Tm | N.d. | 0.01 |
| mm4_intron_Atp8a2_chr14_59672141_R | Primer3: not found at this Tm | N.d. | 0.01 |
| mm4_intergenic_Gm22227|Zfp703_chr8_26501939_F | TCGTCGGCAGCGTCAATAGACGCCGCTGACCTTC | 60.1 | 0.01 |
| mm4_intergenic_Gm22227|Zfp703_chr8_26501939_R | GTCTCGTGGGCTCGGAGATTCTGTTCTGCACCGCA | 59.9 | 0.01 |
| mm4_intergenic_Fars2|Gm26395_chr13_36617940_F | Primer3: not found at this Tm | N.d. | 0.00 |
| mm4_intergenic_Fars2|Gm26395_chr13_36617940_R | Primer3: not found at this Tm | N.d. | 0.00 |
| mm4_intergenic_Gm7936|Gm24396_chr18_30535689_F | Primer3: not found at this Tm | N.d. | 0.00 |
| mm4_intergenic_Gm7936|Gm24396_chr18_30535689_R | Primer3: not found at this Tm | N.d. | 0.00 |
| mm4_intron_Rp1l1_chr14_64019654_F | TCGTCGGCAGCGTCTGGTACTGGGGACATGGTGA | 60.1 | 0.00 |
| mm4_intron_Rp1l1_chr14_64019654_R | GTCTCGTGGGCTCGGCCCTTCAGTCGGCATGTTCT | 60.0 | 0.00 |
| mm4_intron_Dcc_chr18_71881704_F | Primer3: not found at this Tm | N.d. | 0.00 |
| mm4_intron_Dcc_chr18_71881704_R | Primer3: not found at this Tm | N.d. | 0.00 |
| mm4_intergenic_Olfr531|Olfr532_chr7_140404768_F | Primer3: not found at this Tm | N.d. | 0.00 |
| mm4_intergenic_Olfr531|Olfr532_chr7_140404768_R | Primer3: not found at this Tm | N.d. | 0.00 |
| mm4_intron_Cdh13_chr8_118875049_F | TCGTCGGCAGCGTCATCTTTCCCAGGCAGGCATC | 60.1 | 0.00 |
| mm4_intron_Cdh13_chr8_118875049_R | GTCTCGTGGGCTCGGACCTGCTCCAAAGATCCCAA | 58.9 | 0.00 |
| mm4_intron_Fam175b_chr7_132861899_F | Primer3: not found at this Tm | N.d. | 0.00 |
| mm4_intron_Fam175b_chr7_132861899_R | Primer3: not found at this Tm | N.d. | 0.00 |
| mm4_intergenic_Galnt9|Noc4l_chr5_110623643_F | Primer3: not found at this Tm | N.d. | 0.00 |
| mm4_intergenic_Galnt9|Noc4l_chr5_110623643_R | Primer3: not found at this Tm | N.d. | 0.00 |
| mm4_intergenic_Gm14519|Gm14518_chrX_15400845_F | Primer3: not found at this Tm | N.d. | 0.00 |
| mm4_intergenic_Gm14519|Gm14518_chrX_15400845_R | Primer3: not found at this Tm | N.d. | 0.00 |
| mm4_intergenic_Rpn1/mmu-mir-6376|Gata2_chr6_88106392_F | TCGTCGGCAGCGTCGTTCCAGTATTACCGCGCCT | 60.1 | 0.00 |
| mm4_intergenic_Rpn1/mmu-mir-6376|Gata2_chr6_88106392_R | GTCTCGTGGGCTCGGCATGATGCACTGTTCCAGCC | 59.5 | 0.00 |
| mm4_intron_Flt1_chr5_147631485_F | TCGTCGGCAGCGTCGGCAGCTTAGGGGAGTGAAA | 59.6 | 0.00 |
| mm4_intron_Flt1_chr5_147631485_R | GTCTCGTGGGCTCGGGGCCTAACACTGCCCTCATT | 60.0 | 0.00 |
| mm4_intergenic_Tmem37|Dbi_chr1_120102364_F | TCGTCGGCAGCGTCCCACACTCCACACACAGAGG | 60.2 | 0.00 |
| mm4_intergenic_Tmem37|Dbi_chr1_120102364_R | GTCTCGTGGGCTCGGGGTAATGGGTGACTCTAGCAGT | 59.2 | 0.00 |
| mm4_intergenic_Adamts3|Eif5al3-ps_chr5_90071267_F | Primer3: not found at this Tm | N.d. | 0.00 |
| mm4_intergenic_Adamts3|Eif5al3-ps_chr5_90071267_R | Primer3: not found at this Tm | N.d. | 0.00 |
| mm4_intron_Slco5a1_chr1_12885247_F | Primer3: not found at this Tm | N.d. | 0.00 |
| mm4_intron_Slco5a1_chr1_12885247_R | Primer3: not found at this Tm | N.d. | 0.00 |
| mm4_intron_Sh3yl1_chr12_30929979_F | Primer3: not found at this Tm | N.d. | 0.00 |
| mm4_intron_Sh3yl1_chr12_30929979_R | Primer3: not found at this Tm | N.d. | 0.00 |
| mm4_intergenic_Gm11528|Phb_chr11_95655123_F | Primer3: not found at this Tm | N.d. | 0.00 |
| mm4_intergenic_Gm11528|Phb_chr11_95655123_R | Primer3: not found at this Tm | N.d. | 0.00 |
| mm4_intron_Mrgpra3_chr7_47592236_F | TCGTCGGCAGCGTCATAGAGGCTGGCAGAGGACA | 60.0 | 0.00 |
| mm4_intron_Mrgpra3_chr7_47592236_R | GTCTCGTGGGCTCGGTGGCTTTTCTCCCATCCACA | 59.2 | 0.00 |
| mm4_intergenic_Mrgpra2b|Mrgpra3_chr7_47558442_F | TCGTCGGCAGCGTCATAGAGGCTGGCAGAGGACA | 60.0 | 0.00 |
| mm4_intergenic_Mrgpra2b|Mrgpra3_chr7_47558442_R | GTCTCGTGGGCTCGGTGGCTTTTCTCCCATCCACA | 59.2 | 0.00 |
| mm4_intergenic_Gm23061|Ostf1_chr19_17987943_F | Primer3: not found at this Tm | N.d. | 0.00 |
| mm4_intergenic_Gm23061|Ostf1_chr19_17987943_R | Primer3: not found at this Tm | N.d. | 0.00 |
| mm4_intron_Efna5_chr17_62659063_F | TCGTCGGCAGCGTCCAGGTTAAGAAGGGAAAGGAGACA | 59.9 | 0.00 |
| mm4_intron_Efna5_chr17_62659063_R | GTCTCGTGGGCTCGGGACTGATAGGCACACCCAGC | 60.4 | 0.00 |
| mm4_exon_Alg3_chr16_20606516_F | Primer3: not found at this Tm | N.d. | 0.00 |
| mm4_exon_Alg3_chr16_20606516_R | Primer3: not found at this Tm | N.d. | 0.00 |
| mm4_intergenic_Gm24221|Sstr4_chr2_148329941_F | Primer3: not found at this Tm | N.d. | 0.00 |
| mm4_intergenic_Gm24221|Sstr4_chr2_148329941_R | Primer3: not found at this Tm | N.d. | 0.00 |
| mm4_intron_Sec24d_chr3_123314982_F | Primer3: not found at this Tm | N.d. | 0.00 |
| mm4_intron_Sec24d_chr3_123314982_R | Primer3: not found at this Tm | N.d. | 0.00 |
| mm4_intron_Rbms3_chr9_116791965_F | Primer3: not found at this Tm | N.d. | 0.00 |
| mm4_intron_Rbms3_chr9_116791965_R | Primer3: not found at this Tm | N.d. | 0.00 |
| mm4_intron_Ralyl_chr3_14109393_F | TCGTCGGCAGCGTCGCAATTGGCAGTTTAATCCAACAC | 59.8 | 0.00 |
| mm4_intron_Ralyl_chr3_14109393_R | GTCTCGTGGGCTCGGACATCGGGAAACATCCATGACA | 60.0 | 0.00 |
| mm4_intron_Rab3ip_chr10_116939490_F | TCGTCGGCAGCGTCGGGGTCGTTAGCCATAGCAA | 59.8 | 0.00 |
| mm4_intron_Rab3ip_chr10_116939490_R | GTCTCGTGGGCTCGGGCTTTATATGGATTGTTTTACAGCC | 57.0 | 0.00 |
| mm4_intron_Psma8_chr18_14710475_F | Primer3: not found at this Tm | N.d. | 0.00 |
| mm4_intron_Psma8_chr18_14710475_R | Primer3: not found at this Tm | N.d. | 0.00 |
| mm4_intron_Nsmce2_chr15_59517069_F | TCGTCGGCAGCGTCGACTTCCTGGGCCTGTCATG | 60.3 | 0.00 |
| mm4_intron_Nsmce2_chr15_59517069_R | GTCTCGTGGGCTCGGTCAGGGTGCAAGTGCTGAAA | 60.1 | 0.00 |
| mm4_intron_Col14a1_chr15_55465005_F | TCGTCGGCAGCGTCGCCTCGAGTTTTCATGCCAC | 59.8 | 0.00 |
| mm4_intron_Col14a1_chr15_55465005_R | GTCTCGTGGGCTCGGGTCATGAATCTCCTTTTGTGTCTGT | 59.5 | 0.00 |
| mm4_intron_Cntnap2_chr6_45096266_F | Primer3: not found at this Tm | N.d. | 0.00 |
| mm4_intron_Cntnap2_chr6_45096266_R | Primer3: not found at this Tm | N.d. | 0.00 |
| mm4_intergenic_Veph1|Shox2_chr3_66935869_F | Primer3: not found at this Tm | N.d. | 0.00 |
| mm4_intergenic_Veph1|Shox2_chr3_66935869_R | Primer3: not found at this Tm | N.d. | 0.00 |
| mm4_intergenic_Unc5d|4933433F19Rik_chr8_29752915_F | TCGTCGGCAGCGTCGCCGGGATAATGGAGTCTGG | 59.9 | 0.00 |
| mm4_intergenic_Unc5d|4933433F19Rik_chr8_29752915_R | GTCTCGTGGGCTCGGCCCTGTTGGATGAAGACAGCA | 60.2 | 0.00 |
| mm4_intergenic_Tktl2|Gm16330_chr8_66570005_F | Primer3: not found at this Tm | N.d. | 0.00 |
| mm4_intergenic_Tktl2|Gm16330_chr8_66570005_R | Primer3: not found at this Tm | N.d. | 0.00 |
| mm4_intergenic_Slc19a3|Ccl20_chr1_83104736_F | TCGTCGGCAGCGTCAGACAGGTCTTTTGTTTGTTTGT | 57.2 | 0.00 |
| mm4_intergenic_Slc19a3|Ccl20_chr1_83104736_R | GTCTCGTGGGCTCGGTTGTGCATGCTTAGGCCAGA | 59.9 | 0.00 |
| mm4_intergenic_Siglec1|Hspa12b_chr2_131106112_F | Primer3: not found at this Tm | N.d. | 0.00 |
| mm4_intergenic_Siglec1|Hspa12b_chr2_131106112_R | Primer3: not found at this Tm | N.d. | 0.00 |
| mm4_intergenic_Setbp1|Gm25824_chr18_79170828_F | Primer3: not found at this Tm | N.d. | 0.00 |
| mm4_intergenic_Setbp1|Gm25824_chr18_79170828_R | Primer3: not found at this Tm | N.d. | 0.00 |
| mm4_intergenic_Serp2|Lacc1_chr14_76615262_F | TCGTCGGCAGCGTCACAACTGCCAAACCATTGCC | 59.8 | 0.00 |
| mm4_intergenic_Serp2|Lacc1_chr14_76615262_R | GTCTCGTGGGCTCGGGATCCGCCCATCTACCTGTG | 59.9 | 0.00 |
| mm4_intergenic_Rps24-ps2|Gm8775_chr3_3988540_F | Primer3: not found at this Tm | N.d. | 0.00 |
| mm4_intergenic_Rps24-ps2|Gm8775_chr3_3988540_R | Primer3: not found at this Tm | N.d. | 0.00 |
| mm4_intergenic_Pard3|Gm6921_chr8_127551533_F | Primer3: not found at this Tm | N.d. | 0.00 |
| mm4_intergenic_Pard3|Gm6921_chr8_127551533_R | Primer3: not found at this Tm | N.d. | 0.00 |
| mm4_intergenic_Pacrg|A230009B12Rik_chr17_10439142_F | TCGTCGGCAGCGTCGGCCCTGGTCACACATAACA | 59.9 | 0.00 |
| mm4_intergenic_Pacrg|A230009B12Rik_chr17_10439142_R | GTCTCGTGGGCTCGGAAGGGTCTCTCTGAAGCCCA | 60.1 | 0.00 |
| mm4_intergenic_Igkv10-95|Igkv10-94_chr6_68687189_F | Primer3: not found at this Tm | N.d. | 0.00 |
| mm4_intergenic_Igkv10-95|Igkv10-94_chr6_68687189_R | Primer3: not found at this Tm | N.d. | 0.00 |
| mm4_intergenic_Gm833|Gm25779_chr4_152922320_F | TCGTCGGCAGCGTCCTGTCAAGGAGCTGAGCACA | 59.9 | 0.00 |
| mm4_intergenic_Gm833|Gm25779_chr4_152922320_R | GTCTCGTGGGCTCGGTCTCTGAAATAAACCTTAGTGGCCT | 59.7 | 0.00 |
| mm4_intergenic_Gm26326|Dnajb9_chr12_43896987_F | Primer3: not found at this Tm | N.d. | 0.00 |
| mm4_intergenic_Gm26326|Dnajb9_chr12_43896987_R | Primer3: not found at this Tm | N.d. | 0.00 |
| mm4_intergenic_Gm25898|Gm13501_chr2_53297458_F | Primer3: not found at this Tm | N.d. | 0.00 |
| mm4_intergenic_Gm25898|Gm13501_chr2_53297458_R | Primer3: not found at this Tm | N.d. | 0.00 |
| mm4_intergenic_Gm24382|Mbnl1_chr3_60203133_F | TCGTCGGCAGCGTCACAGAGAGAGTGTGCTGAACA | 58.9 | 0.00 |
| mm4_intergenic_Gm24382|Mbnl1_chr3_60203133_R | GTCTCGTGGGCTCGGGCTGATTGGTTCTTTCCTCTGC | 59.8 | 0.00 |
| mm4_intergenic_Gm24063|Rps15a_chr7_117889287_F | Primer3: not found at this Tm | N.d. | 0.00 |
| mm4_intergenic_Gm24063|Rps15a_chr7_117889287_R | Primer3: not found at this Tm | N.d. | 0.00 |
| mm4_intergenic_Gm23924|Gm22254_chr6_74497492_F | Primer3: not found at this Tm | N.d. | 0.00 |
| mm4_intergenic_Gm23924|Gm22254_chr6_74497492_R | Primer3: not found at this Tm | N.d. | 0.00 |
| mm4_intergenic_Gm22308|Cbfa2t2-ps1_chr5_59857937_F | Primer3: not found at this Tm | N.d. | 0.00 |
| mm4_intergenic_Gm22308|Cbfa2t2-ps1_chr5_59857937_R | Primer3: not found at this Tm | N.d. | 0.00 |
| mm4_intergenic_Gm17173|Txndc16_chr14_45128826_F | Primer3: not found at this Tm | N.d. | 0.00 |
| mm4_intergenic_Gm17173|Txndc16_chr14_45128826_R | Primer3: not found at this Tm | N.d. | 0.00 |
| mm4_intergenic_Gm14975|Gm4916_chrX_128353260_F | Primer3: not found at this Tm | N.d. | 0.00 |
| mm4_intergenic_Gm14975|Gm4916_chrX_128353260_R | Primer3: not found at this Tm | N.d. | 0.00 |
| mm4_intergenic_Gm14914|Gm14917_chrX_117788062_F | Primer3: not found at this Tm | N.d. | 0.00 |
| mm4_intergenic_Gm14914|Gm14917_chrX_117788062_R | Primer3: not found at this Tm | N.d. | 0.00 |
| mm4_intergenic_Gm13988|Sema6d_chr2_123803202_F | TCGTCGGCAGCGTCCACCTGTGAATGGTGCAAGT | 58.6 | 0.00 |
| mm4_intergenic_Gm13988|Sema6d_chr2_123803202_R | GTCTCGTGGGCTCGGAGCCATTATTACCTTGTGTAAGTGA | 58.2 | 0.00 |
| mm4_intergenic_Gm10287|Gm26468_chr3_149289830_F | Primer3: not found at this Tm | N.d. | 0.00 |
| mm4_intergenic_Gm10287|Gm26468_chr3_149289830_R | Primer3: not found at this Tm | N.d. | 0.00 |
| mm4_intergenic_Fbxo15|Gm25453_chr18_85297064_F | TCGTCGGCAGCGTCGCCTCCCATGCCAAAATACC | 59.2 | 0.00 |
| mm4_intergenic_Fbxo15|Gm25453_chr18_85297064_R | GTCTCGTGGGCTCGGCGTTGTTTGAGACTCACTGGC | 59.7 | 0.00 |
| mm4_intergenic_Fam174a|Gm15427_chr1_95353720_F | Primer3: not found at this Tm | N.d. | 0.00 |
| mm4_intergenic_Fam174a|Gm15427_chr1_95353720_R | Primer3: not found at this Tm | N.d. | 0.00 |
| mm4_intergenic_Eda2r|Gm9062_chrX_97685398_F | Primer3: not found at this Tm | N.d. | 0.00 |
| mm4_intergenic_Eda2r|Gm9062_chrX_97685398_R | Primer3: not found at this Tm | N.d. | 0.00 |
| mm4_intergenic_Casp12|Pdgfd_chr9_5795438_F | Primer3: not found at this Tm | N.d. | 0.00 |
| mm4_intergenic_Casp12|Pdgfd_chr9_5795438_R | Primer3: not found at this Tm | N.d. | 0.00 |
| mm4_intergenic_Camsap2|9230116N13Rik_chr1_136383615_F | TCGTCGGCAGCGTCACACAGAGATCCCAGGACTT | 57.6 | 0.00 |
| mm4_intergenic_Camsap2|9230116N13Rik_chr1_136383615_R | GTCTCGTGGGCTCGGACTGTCTACTTAAAGCCACACACA | 60.1 | 0.00 |
| mm4_intergenic_Arrdc4|Gm23795_chr7_68822638_F | Primer3: not found at this Tm | N.d. | 0.00 |
| mm4_intergenic_Arrdc4|Gm23795_chr7_68822638_R | Primer3: not found at this Tm | N.d. | 0.00 |
| mm4_intergenic_6330403L08Rik/Pdgfa|Prkar1b_chr5_139011242_F | TCGTCGGCAGCGTCCCACTGGAGCCATCAACTGT | 59.9 | 0.00 |
| mm4_intergenic_6330403L08Rik/Pdgfa|Prkar1b_chr5_139011242_R | GTCTCGTGGGCTCGGAAACTGACAGGCCAAGGAGG | 59.8 | 0.00 |
| mm4_intergenic_5S_rRNA|Auts2_chr5_131613260_F | Primer3: not found at this Tm | N.d. | 0.00 |
| mm4_intergenic_5S_rRNA|Auts2_chr5_131613260_R | Primer3: not found at this Tm | N.d. | 0.00 |
| mm4_intergenic_4631405K08Rik|Plxna2_chr1_193644601_F | Primer3: not found at this Tm | N.d. | 0.00 |
| mm4_intergenic_4631405K08Rik|Plxna2_chr1_193644601_R | Primer3: not found at this Tm | N.d. | 0.00 |
| mm4_intergenic_1700019M22Rik|Gm26480_chr12_96169874_F | TCGTCGGCAGCGTCACCAGGAGATCCCAAAAGTAGA | 58.1 | 0.00 |
| mm4_intergenic_1700019M22Rik|Gm26480_chr12_96169874_R | GTCTCGTGGGCTCGGTGGAGACATGAGCTGAGTTTGA | 59.3 | 0.00 |
| mm4_exon_Spc25_chr2_69199492_F | TCGTCGGCAGCGTCGCCTGCACGTGATCTTAGGA | 59.8 | 0.00 |
| mm4_exon_Spc25_chr2_69199492_R | GTCTCGTGGGCTCGGTGGGAGGAGCCTTTCTCAGA | 59.8 | 0.00 |
| mm4_exon_Ntrk2_chr13_58934623_F | TCGTCGGCAGCGTCTCCCTGGCTTTCTTTGGTCC | 59.8 | 0.00 |
| mm4_exon_Ntrk2_chr13_58934623_R | GTCTCGTGGGCTCGGCCTGTCAGAGAGCACAGACC | 59.7 | 0.00 |
| mm3_intergenic_Pdk3|Supt20-ps_chrX_93912605_F | TCGTCGGCAGCGTCGTTCTCTTCCCATGGCCCAA | 59.9 | 0.00 |
| mm3_intergenic_Pdk3|Supt20-ps_chrX_93912605_R | GTCTCGTGGGCTCGGCTAGCACACCCCTTTCCTGG | 60.0 | 0.00 |
| mm3_intergenic_Gm13810|B230118H07Rik_chr2_101038449_F | Primer3: not found at this Tm | N.d. | 0.00 |
| mm3_intergenic_Gm13810|B230118H07Rik_chr2_101038449_R | Primer3: not found at this Tm | N.d. | 0.00 |
| mm3_intergenic_4930509K18Rik|Gm23338_chr4_40412005_F | Primer3: not found at this Tm | N.d. | 0.00 |
| mm3_intergenic_4930509K18Rik|Gm23338_chr4_40412005_R | Primer3: not found at this Tm | N.d. | 0.00 |
These only list off-targets that have primers in the table above. Primers underlined, off-targets in bold.
| mm3_intergenic_Gm3307|Otud7a_chr7_63614814 |
ACTCAAAGTTGGCCCCTAATGAAAAGAACATCAAGAGAAAATATGTAAATTATTCATGCTCGATTAGCAAAAATCCTGAA ACATAGTCATGTCCTATACTTGTTGATAACAGAGCCAAGAAGCTTACAACA |
| mm4_intergenic_Cd274|Pdcd1lg2_chr19_29400397 |
TGCAGACCCTTGTAAGTGGATCGAGTCCTTTCTGAATTCTAGATCAATAATGTTTAATTTGTTCCAAAAGTCGTCATCAT TTCATGATATAGCCTGGAAAGACACGGTCATGTTTCTGGGTGGCCTGATCCAAAGCTTTC |
| mm4_intergenic_Tmc1|Zfand5_chr19_21074030 |
TCAGAGAAATGGAGGAGAAACCTAAAAATACGTTAGACATCTTTCTCTTTCTCTGTGTCTTTAGATACCCAGAAACATTG CCATGTCTTTATCGTTGTTCCATATAGGATGGGAAGAATTTGTTTTCTGGGA |
| mm4_intron_Dnah8_chr17_30793736 |
TGTGAGCCATTAGAGATGTGAATCATTTAAAGATGTTATGGGTTCTACCTGTTTTTTTTAGAAAGTAAAATATCCTACCA ATAGTAGTGTCTAAGGTCAATGTTATGTTTCTGGTAACAGTTGTCAGACGTGTTGGA |
| mm4_intergenic_Gm26235|Gm25392_chr18_18578527 | AGCATTAAATGTGGCTTCATGCATGAAAAGATCAATGTTATGTTTCAGGCTTTGCTTACCTCTTAATTCTTCCCT |
| mm4_intergenic_Gm25715|N6amt1_chr16_86945902 |
TGGGAAGTTCCACGTTCATGAGAAATTGCCCCCAGAAGACATGGTCATGTATCTGGAGGACATCCTTATTTCTGCTGTCT TTGTTTTCACGACACTAATAGGATTCATCTTATCAGACCCAGTCCCC |
| mm4_intron_Tmem229b_chr12_78989660 |
TCTCTTCCCAGGATCAGGTGATCTGTATTCTAAGGCCAAAAGACATGGTTAAACTTCTGGCATTATACCTACATGTCATT AATGTATTCTGACACCTCATTTCAATGTGCCTGGTCACAATGTACCT |
| mm3_intergenic_Gm23342|Myt1l_chr12_29326735 |
CTGATCAAGAGCAGCACGTTAATAATTAATAATGACAAGGTTATGTTTCAGGTAGCTCAGTGTCAAGTTCATGTGATGAG GATCTTCTGTTGGGAAAGGTCACCCCTTCCGTTCTTCTGGGGCCAGTGTATATCCTGC |
| mm4_intergenic_RP24-399L6.2|9230113P08Rik_chr9_35864710 |
AGTGTCAGGAGCCAACAAGTGGAGCTTGAAAAGTGGATAAGCAACAAGTCTCCCAAAGGAGGTGGCTATATTTCAGGGCT GACTCATTAAGGAAGAGGTGGGATCTTGGA |
| mm4_intergenic_Gm11279|Gm11280_chr13_21904803 |
TGAAGGATCTCAGGGAGGACTCCCAGAAACATTTCCATTTCCTGTATTCCTTTATCTCATCTGTGCTCCTAATAAAGGAA CCTAACATTGGTGCAGACAAGTAGGACTGCT |
| mm4_intron_Wdr48_chr9_119906695 |
GAGTGCTAACTCCCCACCTCGTGTATTTTTGTGAATCAGTTACTGAGGAAAGAGTTCTACATTGGCTTCCAAATCAAAGG GCATGGACATGCTTCTGGCTAAAAGCTTTGCGTTGGATTTTTGTTTGGGGTTTGGGTTGT |
| mm4_intron_Nrg2_chr18_36030766 |
ATCAGCTGGGGCCCAAATGCTCCAAAGGGAGTGGATATGTTTCTGGGCTCTGTTCTGTGGTCTGAGGACAGTTTGAGGAT TCATTTTTCCACCCTAAGGTCCAAACTCTGAAAACGTGTTTCTGGATGTGCCA |
| mm4_intergenic_Ccdc85a|2810471M01Rik_chr11_28633770 |
CACCTCTGTTGACCTCTGACCTAGCTGTTTTAATCACACAGATACAGGAGATGGACAGGGTAATGTTTCAGGAGGCAATT CTCCTTGGTAGTGCAGTGGG |
| mm4_intergenic_mmu-mir-6370|Gm22828_chr6_19605289 | AACGTGGAATAGGAACATGGTAAACGGACAAGATAATGTTTCTGGGAAACTTTACACGTGAGGTGGATGCATGGTGA |
| mm3_intergenic_Gm26535|Gm24710_chr10_37883313 |
ATAGTCTCTTTTGAGCAGCTGAAAAATACATGATTATGTTTCAGGAAAATTTATTCCACTGTTTATGAATTCTTACAATA AAGTCATAGTGTTATTGTTAGTTATTACTCACTTTTTTTGCATTCCCAGAAGAAACATCT |
| mm4_intron_H2-Q6_chr17_35428828 | TATGGCCTGATTGCAGAGGGGCACTGTGGACATGGTTGTGTTTCAGGGACTCCCACAATCCCCTGTG |
| mm4_intron_H2-Q4_chr17_35383823 | TATGGCCTGATTGCAGAGGGGCACTGTGGACATGGTTGTGTTTCAGGGACTCCCACAATCCCCTGTG |
| mm4_intergenic_Ednrb|RP24-312G4.2_chr14_104427783 |
GCGATAAGGCTTCAGCAAAGTACATGATGGATTTTAATGTGTGTGTTCCAGAAACAAAACCATGTCTCCTTTGCAGACCA TAACTGTAGGACT |
| mm3_intergenic_Gm23225|Gm24127_chr14_92148520 |
GGTATAACCATTTCCTTCTCAATGCTTATTGTAAACTTAAATGCCAGAAACATATCCATGTATTTTGCTAACCCAATTTT TTAAATATTTTTCATGCTCTGTGAATTGATTTCT |
| mm4_intergenic_4930480K15Rik|Nrxn1_chr17_90870150 |
CCCCATATAGCCTGCAGTTTCTTTGATGATGTGAATTCAGAGAGCATTTTCCACTTTGATTAGAAAGAAAGGGAAGTAAC AGGACAAGGCTATGTTTTAGGCAAACCAGAGCAGATTCAAGCCT |
| mm4_intergenic_Nrg3|Gm10713_chr14_39687638 |
AGGCTAGCATTGATGGACAGATAAATCACATAAGGGATGAGAGACATTCTACCTTGAAGATGTCTTTCTCTTGCAAATGC CCAGAAACATTAAAATGTCTTTTTCACAGAGCTACACAGAGTGAGC |
| mm4_intron_Tbc1d8_chr1_39396731 |
CTTATGCTGCCGGCTTACCTCAACAGGGCATGGCTATGTGTCTGGAAAATGCAAGGATTAGCAACTCAGAAACAGGGCTC CAAGGGCAGATGGTGCTTTTTCTCGGTGTTCCTGTCCACATG |
| mm4_intron_Ptprk_chr10_28354232 |
TCAGCTTCTTGGGTGATGGCTATCACATAGGGTATACTAGGAAGCTTGGTAGCACCAGAAACAAGACCATCTTCTTTGCC CATTAAGGACTGTTGTTCA |
| mm4_intron_Atp8a1_chr5_67742950 |
TCTTCCCATGGCACTTTCCATAAGCAAAGAGTGTCCAAAAACATAACCATGTGCTAATTTACATGCTGCTTATATCTCCT ATAACAAACAGGGCTGGGAAGGACACTTTCT |
| mm3_intron_Jak1_chr4_101189210 |
GGCGAAGAGGTTGTGACAGAGAGGAGAGATACCTGAGAAGAAAGGACATGGCTAAGTTACAGGCAGATGCACTTGGCCAT CTGTTCCCA |
| mm4_intergenic_5S_rRNA|Cops8_chr1_90573178 |
GCCATCGTGACAGGTGACATCAGACTATTTTTCCAGGTCACAGGGCACTGACAAAGTGTGAGGCATAGATATAAGCCCGG AAACACAGCCAAGTGCTTTCCCAGGTAATCCAAGGGTGTGTGTGCT |
| mm4_intergenic_Gm20698/Vmn2r7/Gm26939|Vmn2r7/Gm26939_chr3_64780153 |
TGAAGGTTTCATAAACTTTAGGAGGTTTTATTTAGTAGGAAGTAGGTAACCAGGAACATATCCATTTTCTTTTCCTATCT ACCATGATCTAAACTGCTAAAATCTGCTACATTCTGTCCTCTATGA |
| mm4_intergenic_2810055G20Rik|Gm11146_chr16_77564451 |
AGTCGCCACTTACATTACTAACATAGTTTTCCACTTTAGAATTTCATGAGCAAAAATAAGTACATGGTTGTATTTCTGGT AGCAAGAACATATTAGAAAATAAATCTCGTTCACATTGAAGGTCT |
| mm4_intergenic_Gimap3|Tmem176b_chr6_48782100 |
GGAACACGCATCCCTGTTGAAAACATGAAACAAAATGTGTTTAAACTGGAAACATAACCATGTTTTCGGTAGAAACACTC TGTAGGATAACAATAATCATTATTTCAAAACCAATGCATCACATACACTTTCA |
| mm4_intergenic_Gm24246|Pik3c3_chr18_29785027 |
GGTAGGTCTTGTCAGGGTGCACTAGTAATGTGTAAAGGACATTGTGAAATTTCAGGCTCTGGTGTGCCCAGCACATGGGA AAATGGAATCACAAACCACCAGAAGGGTCAAGGAGGCCTGAACAA |
| mm4_intergenic_mmu-mir-6344|Irs1/Gm9747_chr1_82204713 |
AGCAGTGGTTGGTAAGTGCCAAGGGACAACTGAACTGCAATTCCTGAAACTTAACCTTGTCACTTTTGACAAGGCCCATT CTAACCAAGTGATCCCTTATACTTAAGACATATTTGTCGGCAACTAGTGAGACA |
| mm4_intron_Tectb_chr19_55185828 |
TGGGTGTTTCCAAAGCAACAACTGCCCCCTTGCATATATTTCCATCAAATTACCAGAAACAGAACCATGCCCTACATAGA ACAATGGATCCACCACACTGCTAATTGCTTAAGATTCTGGGAAGCCCAGAGTCTAAGC |
| mm4_intergenic_Lrrtm1|Ctnna2_chr6_77271533 |
AGCACTACCTTGGAATTCCTACTTGTATGTGAATGGACATGGAAATGTTCCTGGCTAGCAGGATGAAGTGGAAGAGAGAG TGCAGAAAGGGGAGAAGATGAGCGTGA |
| mm4_intron_Ppp1r7_chr1_93353112 |
CCCAGTAAACAGGGCTAGCCCTTTATCCCCTAAACATTAACATGTCCTCTGGCAGGATTTGGTTTGTTGTTCAAGATCTC TTTAACCTTGAAACCATGGGTCAGAATGGGA |
| mm4_intergenic_Atp9b|Sall3_chr18_80941962 |
GGAGGGGCAGCAATTACTCATGATAACTTTATTAGCTATAATTTGCGTTTATCTTCTGAAAGGACAGAGTGATGCTTCTG GGAGCTGTATATTAAATCCAAGGGCTTATACTTGACCCTGCCCTGATTCATTCCA |
| mm4_intron_Angpt4_chr2_151921024 |
TGTGCTGGCAAGTTTCTTCTTATTGAGACATAATTCACATATAGGAAAATCCATGTACTGCCATTTTATGACATAGGACA ATGTCAACATCCCTAAACATTCCCATGTCCCTTTGAAGTTACACACACCCACCACAGG |
| mm4_intergenic_Gm25235|Atf6_chr1_170833044 |
TGGCCAAAACATCCACACCTTCTGTACCTCCTCCCTGTCTTCCTGGTGTGTTGCTTCTTCAGAGGACAGTGTTATGTTGC AGGACAACTGGAATAACGAGACGCTGAATCCTGAGAGCCCCAC |
| mm4_intergenic_Qpct|Cdc42ep3_chr17_79139730 |
TCTGGCTCTCTGGTAGGCAAATACATGTTGAATGTGAATACAGGTATTTATCCAAGTATATGGTTGTGTTTCAGGACATG TTCCAGGAGTAAAAAAATCACAGTGTATCAAGATGGGGTAGATGATGTAGTGGGG |
| mm4_intergenic_PCA3_1|Prune2_chr19_17070736 |
TGGAAACAGAGAGGGAAATTACATACTAGGAAGAAAGAGCATGGTTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNAAGGTAGCCATTCTATCAGTGAA |
| mm4_intergenic_Gm8356|Gm3629_chr14_6544769 |
TGTCTTGACTTGTCTGTGACCAAATAGTCAGACTAAGACAAAGGTCAATAAAAGGGCATTGTTTTGTTTTTGGCTGTGTA TAGGCTTTCTGTACTCTAGGCACTGATCTGGATCTCCG |
| mm4_intergenic_Gm6356|Gm10406_chr14_6981004 |
GTCTGAACTGTGTCAGGCCTTTTACTAGGGGTCTTTGTCTTGACTTGTCTGTGAACAAATAGTCAGACTAAGACAAAGGT CAATAAAAGGGCATTGTTTTGTTTTTGGCCGTGTATAGGCTTTCTGTACCCTAGGCA |
| mm4_intergenic_Gm3542|Gm17126_chr14_5342386 |
TGTCTTGACTTGTCTGTGACCAAATAGTCAGACTAAGACAAAGGTCAATAAAAGGGCATTGTTTTGTTTTTGGCTGTGTA TAGGCTTTCTGTACTCTAGGCACTGATCTGGATCTCCG |
| mm4_intergenic_Gm3373|Gm26557_chr14_5759555 |
TGTCTTGACTTGTCTGTGACCAAATAGTCAGACTAAGACAAAGGTCAATAAAAGGGCATTGTTTTGTTTTTGGCCGTGTA TAGGCTTTCTGTACTCTAGGCACTGATCTGGATCTCCG |
| mm4_intergenic_Gm17223|Gm10413_chr14_3387992 |
CGGAGATCCAGATCAGTGCCTAGAGTACAGAAAGCCCATACACGGCCAAAAACAAAACAATGCCCTTTTATTGACCTTTG TCTTAGTCTGACTATTTGTTCACAGACAAGTCAAGACAAAGACCCCT |
| mm4_intergenic_Gm17221|Gm17188_chr14_3181071 |
CGGAGATCCAGATCAGTGCCTAGAGTACAGAGAGCCCATACACGGCCAAAAACAAAACAATGCCCTTTTATTGACCTTTG TCTTAGTCTGACTATTTGTTCACAGACAAGTCAAGACAAAGACCCCT |
| mm4_intergenic_Gm11107|Gm3115_chr14_4072370 |
CGGAGATCCAGATCAGTGCCTAGAGTACAGAAAGCCTATACACGGCCAAAAACAAAACAATGCCCTTTTATTGACCTTTG TCTTAGTCTGACTATTTGGTCACAGACAAGTCAAGACAAAGACCCCTAGTAAAAGGCCTG |
| mm4_intergenic_Gm11105|Gm3138_chr14_4242069 |
CGGAGATCCAGATCAGTGCCTAGAGTACAGAAAGCCTATACACAGCCAAAAACAAAACAATGCCCTTTTATTGACCTTTG TCTTAGTCTGACTATTTGGTCACAGACAAGTCAAGACA |
| mm4_intergenic_Gap|Gm2888_chr14_3023099 |
CGGAGATCCAGATCAGTGCCTAGAGTACAGAAAGCCCATACACGGCCAAAAACAAAACAATGCCCTTTTATTGACCTTTG TCTTAGTCTGACTATTTGTTCACAGACAAGTCAAGACAAAGACCCCT |
| mm4_intergenic_Gm5105|1110002E22Rik/Gm5105_chr3_138061533 |
GGTTTGCCTTCTGTGAACGGTTTCTTCTCTTGAATAGCACACTTAGTTATCTTATTATGCCAGATTTGGAGACCCAAAAT ATAAGCATGACCTTTAATCAGCTGGTGGGTGGTCTGGCCTTCGTTCTTC |
| mm3_intergenic_Olfr576|Olfr578_chr7_102976242 |
AGGGCACACTACAACTCGAATATATTAGATACGATAATGTTTGTACTAAGGATAGATAAGCATATAGGATACTTATAAAG GACAGGGTTATGTTAAAGGAGAAATATAGGAGGCAGACTTAACTGGAGAG |
| mm4_intergenic_Gm5641|Gm26678_chr3_54579127 |
TGTTGTTTCTTCTGTGTTCCTACTTCATTAGAAATATGTTTCAGCATTCTGGATTTATCCAGAAATGTAACCATGTTATT TGGTTTTCAGGTTGGTAAGTGATATTTGTGA |
| mm4_intergenic_Gm25434|Rergl_chr6_139466643 |
CCAAAGACCACTTGCATGCAATAACTGATACTGAGGGTGTACTTTTCTCCTAACACATGATTACTACTGTATTTATTTTT TGATAGTGAAAAGACTTGTTTAAGTTTCAGGCAACATTTGAACCCTTCCCAAGTCTTTGC |
| mm4_intron_Ncam1_chr9_49697711 |
GTCTGTGCTCTGACCCCTTCTATCTACCACACAGCAGAAACCAACTCCTATGAAGACATTATTTAGGTGCAGTTGCTTCC AGATACATAACCATCACATTTGGCTACTTCATAAGAATATCCCCA |
| mm4_intergenic_Megf9|Gm11227_chr4_70721682 |
GGGCACTTGTATTCTCCCACAGTTTGGAGGAAGAACTGAACAAGCATGGCAATAAAAGGCTCCTTCTCAGTCATAGGACA TGGTATTGTTTTTGGACCTAAAGGCAACACATTTTCAGATGCT |
| mm4_intron_Spon1_chr7_113827975 |
AGGAGCTGAAAGATGCCACATTGTCCATTCTGAATGAACAGGAACCAAACAAATAAACAAACCCCAAAACAAAACCAAGT CTTTTGAGGAACTGCAGAAAAATAAGTCAACAAAGGGAGCCCG |
| mm4_intergenic_Gm12026|Gm12027_chr11_19454226 |
GGGACTTCATGAGTGAGGGCCAGAAACTCTACAGCACAGTTCTTCCTCTTCCCCAGAAACAGAAACATGTCCTACAGGTT CAGTGAGAGGAGTAAAAGTGGTTAGTGAGCACCGG |
| mm4_intergenic_Gm22327|Zfand3_chr17_29985544 |
TTCGAATCCACGACCTCACCCCAGGGTCCCGGGAGACTTCTGTCCTCAGGCTTTGTCCCGTGAATATAAGCATGTCCTTT GATTTCCTCTGTGATCTGGAATGTTCTGGCCAGGCTTTCTTCTG |
| mm3_exon_Gm6578_chr6_12099905 |
TTTGTCGTCTCCTGGCGTACTTTCTCATAGCAGTAGTCACAAAGGACATGTTTCTGCTTCAGGTAACCACATTCAGGGCA AATGTCTATATTGTTCTTAATTTTAATAAGCTTTTGAGGGTTTCCTCTCCTACATCGG |
| mm3_exon_Cntn3_chr6_102164003 |
GCCATGTCTTCCACAGTCCTTTGAAAATCACATATTGAAAGACTCGACTCATCCATATCAAAGCCAGCAACATCACCATG TTCTTTTACAAATTTTACTTGGGAATGGAAAAGGCTGCCTG |
| mm3_intron_Col17a1_chr19_47684306 |
ATGTGTGTGGGAGGAGGGATGGAAGGAGATGGTTATGGTTCAGGCCACTGTATGCCACGTGAAGCCAGCGGTTGGCACCT GCTCTGGCCACGCTGTCCATCTATCCCTGCCCTCCACATGA |
| mm4_intron_Ahdc1_chr4_133050869 |
GGGTGGGATGCCATGTCTAGATGGGGGACTCTGAGAAGGACATGGTTGTGTCCCTGGTCATACTTTGTGGGTGGAAGAGA CTTCTCCCATGGCG |
| mm4_intron_A230071N21Rik_chr7_112527649 |
GTGGTCATGTCATGGAGCCAGATCTCAGAAATGGCTTAGGCCTACTGTCAAAACATAAAGGACAGGGTTCAGCTTCAGGT CTAGTCTGTTCCTTACTGCTCTGT |
| mm4_intron_4930556M19Rik_chr15_10736219 |
CCCAACGAAGGATCTGGTTACATATTTACATGTGATACACAGAGGAAAAGAAAGCCTTTCTTCTTTTTAAAGGATTTGGT TCTGCTTCTGGTTTAAATCAATTTCCTTTCCCTGTTCAGATCCAAACACTTCGCATCCCT |
| mm3_intergenic_Robo1|Gm25699_chr16_73389541 |
TGCTTTCTGATGAGGTGAACTGAACAATCTGACATAATGCACAAAAGAACTTGGTTATGTTTAAAGAAAAATATTGACAC ATTTAAAGTGTATCTAATTGTTTTGTTGTTAAATAGTAGAGCCAGGTAGTGTATTGT |
| mm4_intergenic_Gm8805|Crygf_chr1_65725868 | TGTGCATTGAGGAAGTCTCTCTAAATGTCATGTTTGTGTTTCAGGCAGAAAATAATGGCTACAGGTTAGTGTTTACTT |
| mm4_intron_Diap3_chr14_86726916 |
TGTCAAGATTGGAGAAGTGAAGAAAAGGCCATGTTTTTGTTTATGGTGTTTAGGAGGGATTTTTCTCTCATAGCATCAAC AGAGTATCCCATACCTAGATATTAGCTTTGAGAGGACTCTAGGAAAGGGG |
| mm4_intergenic_Poteg|Gm1698_chr8_27548647 |
GCTTGTCTTGAAGGGCATGCTTACTTTGTTTATATCTAGTTGCTTTAAGAAAGGAAATTGTGATGTTCCTGGAAAGTAGT TAGGAAATCTCTGTGCAACTCCT |
| mm4_intergenic_Bbs9|Bmper_chr9_23145779 |
GGGGCATAGGAATGACACACTGTTACTTATAAAGGATTTGGTTATGTCACAGGCATATGTCACAGATTGAATGATGAGGG CCATGTTCATTTTGGAGG |
| mm4_exon_Ap2a2_chr7_141631708 |
GCCACTGGCTCAATCTCAGAATCCAGAAACAGCGCCATGTGCTTTTAGGGTTAACCCAGGGCTGCGTGGCTCTGCTGGAT GGTGACAGCGGTGGCTTAGAGGTATGTGACCTCATGGGCTAGGCAGTGTC |
| mm4_exon_Matn4_chr2_164389783 |
CTCAGAGATCCCTTCACCCGCCCTGCAACCCGCACCTCCAGCCCCAAAGGATATGGTTCTGCGTCAGGCTCTCGAGCGCC CCCAGCGTGCGGCCCTGGAACTCCACGAGGCTTTC |
| mm4_intergenic_Prpf19|Zp1_chr19_10910417 |
AATAACAGCCACAAAGGGCAAATGGGCATGGTTATGGTTATGGTTGTATAGGAGAAGGTCTTTGCCATATTCAAAGGTAA AAATGTGAGAGGGAAATGAAGCATGAAGGAACCCCG |
| mm4_intron_Gas7_chr11_67516235 |
AGCCTTCTGTGGAATCGCTCAGCCTGTGAGACCAGTCCAAAAAGCACATGGTTCTGATACTGGCCAGCATAGCTGCAGCC ATGCCTGCTTGTCTATGTTGGACTCAGGTTCATGCAGC |
| mm4_intergenic_Gm5976|Tmem194b_chr1_52547245 |
AGGGCTTGGGAGAGTTCTACTAAAGGAAAAGGTTTTGTTTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNAGTTGCTACACAGAAAGACCTCTTCAGCCATGGC |
| mm4_intergenic_Gm16477|Gpr26_chr7_131896789 |
CCCATAGTGTCATGACCATGGTATGTCAGAAACATAACCATGTTTGTGCTTTTCCACAATACCAGAATTTTTTTTTTCAG AAATTTTTGTATAAAAATAAACTCACAAGTTTTGGTGATTTTGTTGGCAACA |
| mm3_intergenic_Nrcam|Stxbp6_chr12_44638821 |
TTGGCAGGGTTCAGCTCATTATTTTTTCATTTTCTCTCAAGCTATTAAGAGACTTTTGACTAGCCTGTGTTTAAATGTGT GTTTACAAAGGACATTTTTATGTTTGTGGGCGAAGGATCTGATTCTGTGAC |
| mm4_intergenic_Ttc32|Gm7099_chr12_9192537 |
GCACCGTGGACTTTGGGTAATTTAGCCTTGGAAAGGAACCTGGAAGATAGGACATGGATATGATTGAGGATTTTGGAATT TGCATCTGGGTATCTTCTGGGTGAGGTAGGAACTGGGACCTGGATGTAGGGA |
| mm4_intergenic_Gm23464|S100a2_chr3_90562004 |
GCCACTGCCTGGTATGTTCATGTGTTCCACTTCCAATGCAAGAAACTCCACAAACATTAGCATGTTCTTTCTGGACCATG GCACCTGGTGGATGCAAGCACCTGTGAT |
| mm3_intergenic_Arid5b|1700040L02Rik_chr10_68401693 |
GTTTGCTTGCGTTGGTAGGGCTTTTTTGATAGGAGGTTGTGAGAGGAGATGGTTATGTTTATGATTAGCCAGTGTTTTCC CCAGCCTCCCTTGCTGCATTCCTGA |
| mm4_intron_Nrxn3_chr12_90145376 |
TGGAAGATCCACCCGTCTATTAAGAAGACATTTGTGATTCATCCTAACACGTAAACATGTCCTTTGTTCTTCATTGTGGC TTGGAAAAAGATCACACAGACCTGTCTGCTAATGACACTTGT |
| mm4_intergenic_Gm22227|Zfp703_chr8_26501939 |
AATAGACGCCGCTGACCTTCCCAGCAGCTCATAATATCCTGAAACCTCTCCGTGTCCTTTTGCAGCACCCTGGCCTGTGC CCTGTTATGGGATTGGTTCTGTGTACAGTGCGGTGCAGAACAGAATCT |
| mm4_intron_Rp1l1_chr14_64019654 |
TGGTACTGGGGACATGGTGATACTAAGGGACCCAGTGGTGCTGGGGACATGATGCTATCAGGGACATGGTTATGTTGGAG GATACAGAGATGCTGTGGGACATAGTGATGTCAGAGAACATGCCGACTGAAGGG |
| mm4_intron_Cdh13_chr8_118875049 |
ATCTTTCCCAGGCAGGCATCTATCCATCTCTAACTGATACCTGACTCTCCCAAGAGAATGTTAAAGGAAATGGTGATGGT TTTGGCTCTATACCATTTTCCTTCTTGAGACAGTTGTGTTTGGGATCTTTGGAGCAGGT |
| mm4_intergenic_Rpn1/mmu-mir-6376|Gata2_chr6_88106392 |
GTTCCAGTATTACCGCGCCTGAGATTCACGAAGTCCTGCTTCAGGAAGTCGAAGGCAAAGGACATGGTTTTGCTGGTGGC CTAGCGGTGGCGCTCTGGCATCCCTGGGCTGGAACAGTGCATCATG |
| mm4_intron_Flt1_chr5_147631485 |
GGCAGCTTAGGGGAGTGAAACACCTTAAACCTCACCATGTCCTGTGCAGTCAGTGGCATTCCAGTTTCAGAGGTAAACAG GGCCTCGGAGGGCAGGAAAATGAGGGCAGTGTTAGGCC |
| mm4_intergenic_Tmem37|Dbi_chr1_120102364 |
CCACACTCCACACACAGAGGTGTTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTACTGCTAGAGTCACCCATTACC |
| mm4_intron_Mrgpra3_chr7_47592236 |
ATAGAGGCTGGCAGAGGACAGGCAACTTATTAATAACCCCAAAGACCAGGAACCCAACCATCTCCTTTGAGCAGTCCCTT AGAATCATCACCTTGGTGTTTTGATTATATGTGGATGGGAGAAAAGCCA |
| mm4_intergenic_Mrgpra2b|Mrgpra3_chr7_47558442 |
ATAGAGGCTGGCAGAGGACAGGCAACTTATTAATAACCCCAAAGACCAGGAACCCAACCATCTCCTTTGAGCAGTCCCTT AGAATCATCACCTTGGTGTTTTGATTATATGTGGATGGGAGAAAAGCCA |
| mm4_intron_Efna5_chr17_62659063 |
CAGGTTAAGAAGGGAAAGGAGACAAAATTTGGAATGTCAAGAAATTAGATGTTCACTGTCGTCATAAAAAGTATTGAATC CATCCAAAGGAAATGGGTAGGTTTGGGGGCGGGGGGGAGGCTGGGTGTGCCTATCAGTC |
| mm4_intron_Ralyl_chr3_14109393 |
GCAATTGGCAGTTTAATCCAACACTTAACTTTAGTGCCACCAGAAAAAGAACCAAGTACTTTATAAATGCCGGTAAAGAA TAAAGTTCAGTTAGAAAATAAGAAATGTCATGGATGTTTCCCGATGT |
| mm4_intron_Rab3ip_chr10_116939490 |
GGGGTCGTTAGCCATAGCAAAGGCTTCATCATAGGACAACCTAAGCTAAACACAAAAGAACATGGTTATTTCTAGGGACT TACTTCAAACAAAATCAAAATACATAGGCTGTAAAACAATCCATATAAAGC |
| mm4_intron_Nsmce2_chr15_59517069 |
GACTTCCTGGGCCTGTCATGGCTTGGGCGCAGAGATGTTTTTTACAGCAGTGTTTCTGACAGATGGGAACATGCAGCGAC CACAGCTCCCTGAAAGATCACCATGTCTCTTCTGCTTTCAGCACTTGCACCCTGA |
| mm4_intron_Col14a1_chr15_55465005 |
GCCTCGAGTTTTCATGCCACACAAATTTGGAACTGTAGTCATAATCTATATGATACTACCAGAAAACTAAGCATGTCCTA TTTTCTCCTAAAGTTGTATCTACATGTCTATGTACAGACACAAAAGGAGATTCATGAC |
| mm4_intergenic_Unc5d|4933433F19Rik_chr8_29752915 |
GCCGGGATAATGGAGTCTGGTAAGGTCCATTCTGGTGTTCCCAGAAAAATGACCAGGTGCTTTTAAAGGCCAATCCACAA GTCTACCTACTTGCTGTCTTCATCCAACAGGG |
| mm4_intergenic_Slc19a3|Ccl20_chr1_83104736 |
AGACAGGTCTTTTGTTTGTTTGTTTGTTTTTGTTTTTTTTTTAAACCAAAGGACAGAGTTATCCTTCTGGGTTTTTGGAA GATTCATCTGGCCTAAGCATGCACAA |
| mm4_intergenic_Serp2|Lacc1_chr14_76615262 |
ACAACTGCCAAACCATTGCCCCAGCACGTGATATGCAGGCTGCTTTCGATTTAGGTAAAAGGGCATGGTTGTTTTTTAGG ATTCCTGATCTACGCATTACACTGTTTGCACAGGTAGATGGGCGGATC |
| mm4_intergenic_Pacrg|A230009B12Rik_chr17_10439142 |
GGCCCTGGTCACACATAACAGGGATACTGTGACTGTGGAGCAACCTGATGAAAGGACTACTCTCCCAGAACGATAACCAT GGTCTTTGGATGTTGAAATCACGTGGGCTTCAGAGAGACCCTT |
| mm4_intergenic_Gm833|Gm25779_chr4_152922320 |
CTGTCAAGGAGCTGAGCACATGCTCCAGGCAAAGGTCTACAGCATATGTCCAAACTGCAGGAGAGGCAAAGACCTTGGTT ATCTTTCTGGGAGGCCACTAAGGTTTATTTCAGAGA |
| mm4_intergenic_Gm24382|Mbnl1_chr3_60203133 |
ACAGAGAGAGTGTGCTGAACAAGCATGTAACTCAAGGGCATGGTTATTTTTAAGGGTTTATTTTATGACTTTAGGCAGAG GAAAGAACCAATCAGC |
| mm4_intergenic_Gm13988|Sema6d_chr2_123803202 |
CACCTGTGAATGGTGCAAGTTAACATGGCTTTTTGTAGTGCCATCTCAAGAAACACTATCATCGACTAGTCCAGTGGCCT TAAAAATATCCATGACCTTTGCCCCCTTGTCACTTACACAAGGTAATAATGGCT |
| mm4_intergenic_Fbxo15|Gm25453_chr18_85297064 |
GCCTCCCATGCCAAAATACCTCAAAGTGTAAGTCGAATTTTACAACGGCAAAGGGACAAGGTTATTTCTCTGGTAGACTG GGGCATCAGTACTTGCCAGTGAGTCTCAAACAACG |
| mm4_intergenic_Camsap2|9230116N13Rik_chr1_136383615 |
ACACAGAGATCCCAGGACTTTTCTTTCTAGGCAACAGATTTCCAGAAAGATTACCATGTTCATTGAAGCCATGTGTGTGG CTTTAAGTAGACAGT |
| mm4_intergenic_6330403L08Rik/Pdgfa|Prkar1b_chr5_139011242 |
CCACTGGAGCCATCAACTGTATTTCTTCATGAGAGGACACTGTTATCTTTCTGGATTGGAAGCAAAATTTCACTGGTTCC CAGTGCCTCCTTGGCCTGTCAGTTT |
| mm4_intergenic_1700019M22Rik|Gm26480_chr12_96169874 |
ACCAGGAGATCCCAAAAGTAGAATAGAAGACATGGTTATCTATCAGGTTGTCATGTTGTTTCTTGATTTAGCTTTATATT CAAACTCAGCTCATGTCTCCA |
| mm4_exon_Spc25_chr2_69199492 |
GCCTGCACGTGATCTTAGGAAGCCCCAAAACACTATCCATTCTAGCCAATTAACGTATACAGAGATAACAACAGCCTGAA AAACACCCATGTGCTTTTTAACCTAGCAATCCCCCTCTGAGAAAGGCTCCTCCCA |
| mm4_exon_Ntrk2_chr13_58934623 |
TCCCTGGCTTTCTTTGGTCCCCCAGAAGAAATCTGCTCTCTGAGGATTCACAATGGTGTGTATTTTATTTTTACAGTGCC AGGAAGAGAGAAGGGACATTTTTATTTTTCTGGAGTTAGGTCTGTGCTCTCTGACAGG |
| mm3_intergenic_Pdk3|Supt20-ps_chrX_93912605 |
GTTCTCTTCCCATGGCCCAATTCTAGCCCTACTACTCTTCCATCAAAGGCCATGGTCATCTTTCAGGAACCTTTCCCATG GTAAGCACTTCCAGGAAAGGGGTGTGCTAG |