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Contents:In the table below, Illumina Nextera Handle sequences have been added and highlighted in bold. Primers for the on-target have been added for convenience. The table below is sorted by the CFD off-target score. Sites with very low CFD scores < 0.02 are unlikely to be cleaved, see our study Haeussler et al. 2016, Figure 2.
In the protocol by Matthew Canver, Harvard, two PCRs are run: one PCR to amplify the potential off-target, then a second PCR to extend the handles with Illumina barcodes. Please click here to download the protocol. Alternatively, you can have a look at Fu et al, 2014.
If a primer was not found, the reason is usually that the region around the off-target is too repetitive. To avoid unspecific primers, all repeats are masked for the primer design (not for off-target search). If you think that we should change the parameters here or should use different primer3 settings, please let us know.
| Name | Primer Sequence | Tm | CFD Score |
|---|---|---|---|
| ontarget_mm0_exon_5730457N03Rik/Evx1_chr6_52313843_F | TCGTCGGCAGCGTCAGGGAGCCTGGGATTAGGAG | 60.1 | 1.00 |
| ontarget_mm0_exon_5730457N03Rik/Evx1_chr6_52313843_R | GTCTCGTGGGCTCGGTACCAACCAGAGTGCCAAGC | 60.2 | 1.00 |
| mm3_intergenic_Gm26326|Dnajb9_chr12_44032992_F | TCGTCGGCAGCGTCAAGAGCAATTCCCGATCAGAA | 57.3 | 0.53 |
| mm3_intergenic_Gm26326|Dnajb9_chr12_44032992_R | GTCTCGTGGGCTCGGTGGATTCAAGGGGAAACTGCT | 59.5 | 0.53 |
| mm3_intergenic_Pdzrn3|Gm9871_chr6_101662699_F | Primer3: not found at this Tm | N.d. | 0.52 |
| mm3_intergenic_Pdzrn3|Gm9871_chr6_101662699_R | Primer3: not found at this Tm | N.d. | 0.52 |
| mm4_intergenic_4930583K01Rik|Gm23229_chr7_118279526_F | Primer3: not found at this Tm | N.d. | 0.48 |
| mm4_intergenic_4930583K01Rik|Gm23229_chr7_118279526_R | Primer3: not found at this Tm | N.d. | 0.48 |
| mm4_intron_Tek_chr4_94769033_F | TCGTCGGCAGCGTCTGTCGGGCTGGGGTATCTTA | 60.0 | 0.44 |
| mm4_intron_Tek_chr4_94769033_R | GTCTCGTGGGCTCGGTGTCAGCATAGCACCAAGAGA | 59.0 | 0.44 |
| mm3_intron_Scn8a_chr15_100985124_F | TCGTCGGCAGCGTCTGGGCAAAATGTCTCTGGGT | 59.5 | 0.41 |
| mm3_intron_Scn8a_chr15_100985124_R | GTCTCGTGGGCTCGGTGGGCATGCCAGATATACCTC | 59.3 | 0.41 |
| mm4_intergenic_Slc9a9|Chst2_chr9_95290952_F | Primer3: not found at this Tm | N.d. | 0.40 |
| mm4_intergenic_Slc9a9|Chst2_chr9_95290952_R | Primer3: not found at this Tm | N.d. | 0.40 |
| mm4_intergenic_1700112E06Rik|Gm10248_chr14_22866120_F | Primer3: not found at this Tm | N.d. | 0.39 |
| mm4_intergenic_1700112E06Rik|Gm10248_chr14_22866120_R | Primer3: not found at this Tm | N.d. | 0.39 |
| mm4_intergenic_Cyp2a22|Cyp2a12_chr7_27003706_F | Primer3: not found at this Tm | N.d. | 0.36 |
| mm4_intergenic_Cyp2a22|Cyp2a12_chr7_27003706_R | Primer3: not found at this Tm | N.d. | 0.36 |
| mm4_intergenic_Gm5537|Gm26166_chr3_58173557_F | Primer3: not found at this Tm | N.d. | 0.34 |
| mm4_intergenic_Gm5537|Gm26166_chr3_58173557_R | Primer3: not found at this Tm | N.d. | 0.34 |
| mm4_intergenic_Sel1l3|Smim20_chr5_53266578_F | TCGTCGGCAGCGTCCCCATAACCCAGCACACACA | 60.2 | 0.32 |
| mm4_intergenic_Sel1l3|Smim20_chr5_53266578_R | GTCTCGTGGGCTCGGTTCCTGGAGGGTGTTTGAGC | 59.8 | 0.32 |
| mm4_intergenic_Frmd4a|Gm13187_chr2_4194180_F | TCGTCGGCAGCGTCAGCAGAAATGTTGGTAGACTGGA | 59.6 | 0.31 |
| mm4_intergenic_Frmd4a|Gm13187_chr2_4194180_R | GTCTCGTGGGCTCGGCTTCAGGACGAGGCAGATCC | 59.8 | 0.31 |
| mm3_intergenic_Trabd2b|Gm12829_chr4_114661211_F | TCGTCGGCAGCGTCCACAGTCCCTGTAGGCCAAG | 60.0 | 0.30 |
| mm3_intergenic_Trabd2b|Gm12829_chr4_114661211_R | GTCTCGTGGGCTCGGCTGACCCTGCCTGAGAACAG | 60.0 | 0.30 |
| mm4_intron_Svil_chr18_5067499_F | Primer3: not found at this Tm | N.d. | 0.28 |
| mm4_intron_Svil_chr18_5067499_R | Primer3: not found at this Tm | N.d. | 0.28 |
| mm3_intergenic_Tbx20|Gm23893_chr9_24850071_F | TCGTCGGCAGCGTCAATGTAGCAGGAGAGTGGGG | 58.7 | 0.28 |
| mm3_intergenic_Tbx20|Gm23893_chr9_24850071_R | GTCTCGTGGGCTCGGTCCAACTGCAGAGTGTTCCC | 59.8 | 0.28 |
| mm4_intergenic_Scfd1|Coch_chr12_51535783_F | Primer3: not found at this Tm | N.d. | 0.28 |
| mm4_intergenic_Scfd1|Coch_chr12_51535783_R | Primer3: not found at this Tm | N.d. | 0.28 |
| mm4_intron_Hmcn1_chr1_150970247_F | Primer3: not found at this Tm | N.d. | 0.28 |
| mm4_intron_Hmcn1_chr1_150970247_R | Primer3: not found at this Tm | N.d. | 0.28 |
| mm3_intergenic_Snx19|Adamts15_chr9_30788814_F | Primer3: not found at this Tm | N.d. | 0.28 |
| mm3_intergenic_Snx19|Adamts15_chr9_30788814_R | Primer3: not found at this Tm | N.d. | 0.28 |
| mm4_intergenic_Hpse2|Cnnm1_chr19_43418947_F | TCGTCGGCAGCGTCGTTACCAGAACCTACAAACCATTGT | 59.4 | 0.27 |
| mm4_intergenic_Hpse2|Cnnm1_chr19_43418947_R | GTCTCGTGGGCTCGGTTCCAGTGTGGTCTGTCTGG | 59.2 | 0.27 |
| mm3_intergenic_Atp2a3|P2rx1_chr11_72997574_F | TCGTCGGCAGCGTCGGAGTATGGGAGAGGGCGG | 61.2 | 0.27 |
| mm3_intergenic_Atp2a3|P2rx1_chr11_72997574_R | GTCTCGTGGGCTCGGAGAGAGGGACCTGCTCCAAT | 59.9 | 0.27 |
| mm4_intergenic_Gm4419|Gm5633_chr12_21478825_F | Primer3: not found at this Tm | N.d. | 0.26 |
| mm4_intergenic_Gm4419|Gm5633_chr12_21478825_R | Primer3: not found at this Tm | N.d. | 0.26 |
| mm4_intergenic_Gm24963|Gm10742_chr3_17320623_F | TCGTCGGCAGCGTCAGAGGGAGGCACTGACTTCA | 60.1 | 0.26 |
| mm4_intergenic_Gm24963|Gm10742_chr3_17320623_R | GTCTCGTGGGCTCGGTGCAGTCTTTGTTTAGCTTGCA | 59.3 | 0.26 |
| mm4_intergenic_Cxcr4|Gm26686_chr1_128690471_F | Primer3: not found at this Tm | N.d. | 0.24 |
| mm4_intergenic_Cxcr4|Gm26686_chr1_128690471_R | Primer3: not found at this Tm | N.d. | 0.24 |
| mm4_intron_Kcnab1_chr3_65127551_F | Primer3: not found at this Tm | N.d. | 0.24 |
| mm4_intron_Kcnab1_chr3_65127551_R | Primer3: not found at this Tm | N.d. | 0.24 |
| mm3_intergenic_Gm25226|Plxnb3_chrX_73756754_F | TCGTCGGCAGCGTCTGGGGAAAATTGGCTCAAGGA | 59.8 | 0.24 |
| mm3_intergenic_Gm25226|Plxnb3_chrX_73756754_R | GTCTCGTGGGCTCGGAGGGACCTGCTATCTGGTGT | 59.9 | 0.24 |
| mm4_intron_Atp8b1_chr18_64568650_F | Primer3: not found at this Tm | N.d. | 0.23 |
| mm4_intron_Atp8b1_chr18_64568650_R | Primer3: not found at this Tm | N.d. | 0.23 |
| mm4_intergenic_Gm22210|Gm24848_chr18_63545428_F | Primer3: not found at this Tm | N.d. | 0.22 |
| mm4_intergenic_Gm22210|Gm24848_chr18_63545428_R | Primer3: not found at this Tm | N.d. | 0.22 |
| mm4_intron_Pnp2_chr14_50958668_F | Primer3: not found at this Tm | N.d. | 0.22 |
| mm4_intron_Pnp2_chr14_50958668_R | Primer3: not found at this Tm | N.d. | 0.22 |
| mm4_intergenic_Gm23829|Gm5974_chr1_48216750_F | Primer3: not found at this Tm | N.d. | 0.22 |
| mm4_intergenic_Gm23829|Gm5974_chr1_48216750_R | Primer3: not found at this Tm | N.d. | 0.22 |
| mm4_intron_Gng8_chr7_16894618_F | Primer3: not found at this Tm | N.d. | 0.22 |
| mm4_intron_Gng8_chr7_16894618_R | Primer3: not found at this Tm | N.d. | 0.22 |
| mm4_intergenic_Gm15055|Gm8078_chr6_52115412_F | Primer3: not found at this Tm | N.d. | 0.22 |
| mm4_intergenic_Gm15055|Gm8078_chr6_52115412_R | Primer3: not found at this Tm | N.d. | 0.22 |
| mm4_intergenic_Syn2|Pparg_chr6_115345796_F | TCGTCGGCAGCGTCACACGATCTCCCTCCCACAA | 60.5 | 0.21 |
| mm4_intergenic_Syn2|Pparg_chr6_115345796_R | GTCTCGTGGGCTCGGAGTTAGTTAGGACTTTCGCCCA | 59.0 | 0.21 |
| mm4_intergenic_Slc7a3|Snx12_chrX_101097420_F | Primer3: not found at this Tm | N.d. | 0.21 |
| mm4_intergenic_Slc7a3|Snx12_chrX_101097420_R | Primer3: not found at this Tm | N.d. | 0.21 |
| mm4_intron_Nsd1_chr13_55289192_F | TCGTCGGCAGCGTCTGATGACTCTGTCTCAGGAAGG | 58.9 | 0.21 |
| mm4_intron_Nsd1_chr13_55289192_R | GTCTCGTGGGCTCGGAACACGGCAAGATGAGGACT | 59.3 | 0.21 |
| mm4_intron_Il17rd_chr14_27075074_F | Primer3: not found at this Tm | N.d. | 0.20 |
| mm4_intron_Il17rd_chr14_27075074_R | Primer3: not found at this Tm | N.d. | 0.20 |
| mm4_intergenic_Gm22521|Gm25702_chr15_63044474_F | Primer3: not found at this Tm | N.d. | 0.20 |
| mm4_intergenic_Gm22521|Gm25702_chr15_63044474_R | Primer3: not found at this Tm | N.d. | 0.20 |
| mm4_intron_Slk_chr19_47623092_F | Primer3: not found at this Tm | N.d. | 0.20 |
| mm4_intron_Slk_chr19_47623092_R | Primer3: not found at this Tm | N.d. | 0.20 |
| mm4_intergenic_Gm26231|Olfr867_chr9_20038374_F | Primer3: not found at this Tm | N.d. | 0.19 |
| mm4_intergenic_Gm26231|Olfr867_chr9_20038374_R | Primer3: not found at this Tm | N.d. | 0.19 |
| mm4_intron_Slco2a1_chr9_103055158_F | Primer3: not found at this Tm | N.d. | 0.19 |
| mm4_intron_Slco2a1_chr9_103055158_R | Primer3: not found at this Tm | N.d. | 0.19 |
| mm4_intergenic_Gm13483|Gm13488_chr2_50519558_F | Primer3: not found at this Tm | N.d. | 0.18 |
| mm4_intergenic_Gm13483|Gm13488_chr2_50519558_R | Primer3: not found at this Tm | N.d. | 0.18 |
| mm4_intergenic_Gm21614|Gm23249_chr12_92490334_F | Primer3: not found at this Tm | N.d. | 0.18 |
| mm4_intergenic_Gm21614|Gm23249_chr12_92490334_R | Primer3: not found at this Tm | N.d. | 0.18 |
| mm4_intergenic_Gm7481|Prkd1_chr12_50060983_F | Primer3: not found at this Tm | N.d. | 0.18 |
| mm4_intergenic_Gm7481|Prkd1_chr12_50060983_R | Primer3: not found at this Tm | N.d. | 0.18 |
| mm4_intergenic_Ralb|RP23-386K20.2_chr1_119504901_F | TCGTCGGCAGCGTCACATTGAGTGTGTGGGCGT | 59.8 | 0.18 |
| mm4_intergenic_Ralb|RP23-386K20.2_chr1_119504901_R | GTCTCGTGGGCTCGGCCAGACCAGTTCCCAAGCTC | 60.3 | 0.18 |
| mm4_intergenic_Veph1|Shox2_chr3_66689636_F | Primer3: not found at this Tm | N.d. | 0.17 |
| mm4_intergenic_Veph1|Shox2_chr3_66689636_R | Primer3: not found at this Tm | N.d. | 0.17 |
| mm4_intergenic_Adck1|Nrxn3_chr12_88700306_F | TCGTCGGCAGCGTCGGACAGACTGGGTTGAAGCA | 59.8 | 0.17 |
| mm4_intergenic_Adck1|Nrxn3_chr12_88700306_R | GTCTCGTGGGCTCGGCCCTACTCACAGCCATGCTC | 60.1 | 0.17 |
| mm4_intergenic_Sertm1|Ccna1_chr3_55012689_F | TCGTCGGCAGCGTCTCGAGGTGTGAAAACAGACA | 57.0 | 0.17 |
| mm4_intergenic_Sertm1|Ccna1_chr3_55012689_R | GTCTCGTGGGCTCGGGTTCCTTTCAACCAGTGGGG | 58.6 | 0.17 |
| mm4_intergenic_Gm22777|Spock1_chr13_57236950_F | Primer3: not found at this Tm | N.d. | 0.17 |
| mm4_intergenic_Gm22777|Spock1_chr13_57236950_R | Primer3: not found at this Tm | N.d. | 0.17 |
| mm4_intergenic_Gm16391|Gm17538_chr17_76972728_F | TCGTCGGCAGCGTCGCAAATCCAGCAGCCATGAG | 59.8 | 0.17 |
| mm4_intergenic_Gm16391|Gm17538_chr17_76972728_R | GTCTCGTGGGCTCGGGGCAAGCAGAGCTGTAGTCA | 60.0 | 0.17 |
| mm3_intron_Reps1_chr10_18088894_F | TCGTCGGCAGCGTCAAGAGGCAGGCAGAGTTGTC | 59.9 | 0.17 |
| mm3_intron_Reps1_chr10_18088894_R | GTCTCGTGGGCTCGGCTCAGCAGCTGTCAGGTCAG | 60.3 | 0.17 |
| mm3_intergenic_Gm25740|Gm23481_chr10_46626991_F | TCGTCGGCAGCGTCGCAGAGGTGTGGACCAGAAA | 59.8 | 0.17 |
| mm3_intergenic_Gm25740|Gm23481_chr10_46626991_R | GTCTCGTGGGCTCGGCCTGGTGTACTCCCAGCAAG | 60.0 | 0.17 |
| mm4_intron_Antxr2_chr5_97908713_F | TCGTCGGCAGCGTCGTGATGTATAGAGCTGGGTGGG | 59.9 | 0.16 |
| mm4_intron_Antxr2_chr5_97908713_R | GTCTCGTGGGCTCGGTCCTGCACTGCTGTTCTGTT | 59.8 | 0.16 |
| mm4_intron_Cntnap3_chr13_64779285_F | TCGTCGGCAGCGTCAGCCCAATTTAGTAATTGTGAACA | 57.0 | 0.16 |
| mm4_intron_Cntnap3_chr13_64779285_R | GTCTCGTGGGCTCGGGGTAAAGGTAACGGCATGCC | 59.2 | 0.16 |
| mm4_intergenic_Gm10710|Gm22342_chr3_83533239_F | Primer3: not found at this Tm | N.d. | 0.16 |
| mm4_intergenic_Gm10710|Gm22342_chr3_83533239_R | Primer3: not found at this Tm | N.d. | 0.16 |
| mm4_intron_Nup62cl_chrX_140019469_F | TCGTCGGCAGCGTCTGAGAACCTACCTGGAACTAACT | 58.2 | 0.16 |
| mm4_intron_Nup62cl_chrX_140019469_R | GTCTCGTGGGCTCGGTGGGAAGAACTAGTTACTGGTTGT | 59.3 | 0.16 |
| mm4_intergenic_Gm4918|Hmgb1-ps2_chrX_146131732_F | Primer3: not found at this Tm | N.d. | 0.15 |
| mm4_intergenic_Gm4918|Hmgb1-ps2_chrX_146131732_R | Primer3: not found at this Tm | N.d. | 0.15 |
| mm4_intron_Grid1_chr14_35178770_F | TCGTCGGCAGCGTCTCACACACAACCAGGTCTTGT | 59.7 | 0.15 |
| mm4_intron_Grid1_chr14_35178770_R | GTCTCGTGGGCTCGGGGGAGATATGTGAACCCTGGG | 59.5 | 0.15 |
| mm3_intergenic_Hs3st6|Meiob_chr17_24792723_F | Primer3: not found at this Tm | N.d. | 0.15 |
| mm3_intergenic_Hs3st6|Meiob_chr17_24792723_R | Primer3: not found at this Tm | N.d. | 0.15 |
| mm4_intergenic_Amer1|Asb12_chrX_95469336_F | Primer3: not found at this Tm | N.d. | 0.15 |
| mm4_intergenic_Amer1|Asb12_chrX_95469336_R | Primer3: not found at this Tm | N.d. | 0.15 |
| mm4_intron_AI987944_chr7_41381848_F | Primer3: not found at this Tm | N.d. | 0.15 |
| mm4_intron_AI987944_chr7_41381848_R | Primer3: not found at this Tm | N.d. | 0.15 |
| mm3_intergenic_Kap|Etv6_chr6_133863543_F | Primer3: not found at this Tm | N.d. | 0.15 |
| mm3_intergenic_Kap|Etv6_chr6_133863543_R | Primer3: not found at this Tm | N.d. | 0.15 |
| mm4_intergenic_Pkib|Gm5777_chr10_57741426_F | Primer3: not found at this Tm | N.d. | 0.14 |
| mm4_intergenic_Pkib|Gm5777_chr10_57741426_R | Primer3: not found at this Tm | N.d. | 0.14 |
| mm4_intergenic_Gm24394|Gm25204_chr14_36632234_F | Primer3: not found at this Tm | N.d. | 0.14 |
| mm4_intergenic_Gm24394|Gm25204_chr14_36632234_R | Primer3: not found at this Tm | N.d. | 0.14 |
| mm4_intron_Ass1_chr2_31471339_F | TCGTCGGCAGCGTCCACTTGCTCACTGGGTCTGG | 60.6 | 0.14 |
| mm4_intron_Ass1_chr2_31471339_R | GTCTCGTGGGCTCGGTCTTCCTTCTGAAAGCCTTGTCT | 59.6 | 0.14 |
| mm4_intergenic_Gm25570|Gm15631_chr6_105608565_F | TCGTCGGCAGCGTCTCGGGGTGTTTGCCTACTTC | 59.9 | 0.14 |
| mm4_intergenic_Gm25570|Gm15631_chr6_105608565_R | GTCTCGTGGGCTCGGTCTGTGTAAAGCAGGGGCAC | 60.2 | 0.14 |
| mm4_intergenic_Sst|Rtp2_chr16_23897834_F | Primer3: not found at this Tm | N.d. | 0.14 |
| mm4_intergenic_Sst|Rtp2_chr16_23897834_R | Primer3: not found at this Tm | N.d. | 0.14 |
| mm4_intergenic_Gm13602|Gm13598_chr2_67142183_F | Primer3: not found at this Tm | N.d. | 0.13 |
| mm4_intergenic_Gm13602|Gm13598_chr2_67142183_R | Primer3: not found at this Tm | N.d. | 0.13 |
| mm4_intergenic_Pax5|Gm12463_chr4_44733296_F | TCGTCGGCAGCGTCTGCGATGAGAGATCACTGGG | 59.2 | 0.13 |
| mm4_intergenic_Pax5|Gm12463_chr4_44733296_R | GTCTCGTGGGCTCGGTGCTGTCTACCTTCTCTCCT | 57.0 | 0.13 |
| mm4_intergenic_Gm10782|Slc25a48_chr13_56421836_F | Primer3: not found at this Tm | N.d. | 0.13 |
| mm4_intergenic_Gm10782|Slc25a48_chr13_56421836_R | Primer3: not found at this Tm | N.d. | 0.13 |
| mm4_intergenic_Cadm2|Gm24681_chr16_67994506_F | TCGTCGGCAGCGTCTCCCCTGCAAGTCCAATAGC | 59.7 | 0.13 |
| mm4_intergenic_Cadm2|Gm24681_chr16_67994506_R | GTCTCGTGGGCTCGGGGCAGAGAATTTGGGTAGGGG | 60.4 | 0.13 |
| mm4_intergenic_Pex16|1700029I15Rik_chr2_92381772_F | TCGTCGGCAGCGTCGGGCCTCAACTCTTCTGTCC | 60.0 | 0.13 |
| mm4_intergenic_Pex16|1700029I15Rik_chr2_92381772_R | GTCTCGTGGGCTCGGAGCTTAGCCCTATGGTCCCA | 60.0 | 0.13 |
| mm4_intron_Gm12023_chr11_18664479_F | Primer3: not found at this Tm | N.d. | 0.13 |
| mm4_intron_Gm12023_chr11_18664479_R | Primer3: not found at this Tm | N.d. | 0.13 |
| mm4_intron_Gm17089_chr6_134239467_F | TCGTCGGCAGCGTCGGCCCTTCCTTCCTGTTTCA | 59.8 | 0.13 |
| mm4_intron_Gm17089_chr6_134239467_R | GTCTCGTGGGCTCGGTGGTGGGAGATAGCAAGGGA | 59.9 | 0.13 |
| mm4_intergenic_RP24-86O15.2|Gm10698_chr9_33495682_F | TCGTCGGCAGCGTCACAGCCTCATGACCAGCAAA | 59.8 | 0.13 |
| mm4_intergenic_RP24-86O15.2|Gm10698_chr9_33495682_R | GTCTCGTGGGCTCGGTTGGTCCCGGTAACATGGTC | 59.6 | 0.13 |
| mm4_intergenic_Olfr513|Olfr514_chr7_108769603_F | Primer3: not found at this Tm | N.d. | 0.13 |
| mm4_intergenic_Olfr513|Olfr514_chr7_108769603_R | Primer3: not found at this Tm | N.d. | 0.13 |
| mm4_intergenic_Neurl1b|Dusp1_chr17_26498140_F | Primer3: not found at this Tm | N.d. | 0.12 |
| mm4_intergenic_Neurl1b|Dusp1_chr17_26498140_R | Primer3: not found at this Tm | N.d. | 0.12 |
| mm4_intergenic_Ahr|Agr3_chr12_35749117_F | Primer3: not found at this Tm | N.d. | 0.12 |
| mm4_intergenic_Ahr|Agr3_chr12_35749117_R | Primer3: not found at this Tm | N.d. | 0.12 |
| mm4_intergenic_Npvf|G930045G22Rik_chr6_50738462_F | Primer3: not found at this Tm | N.d. | 0.12 |
| mm4_intergenic_Npvf|G930045G22Rik_chr6_50738462_R | Primer3: not found at this Tm | N.d. | 0.12 |
| mm4_intergenic_Gm20713|Gpc5_chr14_115973891_F | TCGTCGGCAGCGTCTCTCCAGGGATGGATGCAGA | 60.0 | 0.12 |
| mm4_intergenic_Gm20713|Gpc5_chr14_115973891_R | GTCTCGTGGGCTCGGTCCTTGCTTTGTGGGTCCTC | 59.8 | 0.12 |
| mm4_intergenic_Gm26682|Zfp438_chr18_5187169_F | Primer3: not found at this Tm | N.d. | 0.12 |
| mm4_intergenic_Gm26682|Zfp438_chr18_5187169_R | Primer3: not found at this Tm | N.d. | 0.12 |
| mm4_intergenic_Gm15985|Gm6116_chr5_74906476_F | TCGTCGGCAGCGTCTCCAAGCTCAGTCAAAAGGCT | 59.8 | 0.11 |
| mm4_intergenic_Gm15985|Gm6116_chr5_74906476_R | GTCTCGTGGGCTCGGACCACTGCCCTTTCCATGTT | 59.8 | 0.11 |
| mm4_intergenic_Adtrp|Gm22157_chr13_41887219_F | Primer3: not found at this Tm | N.d. | 0.11 |
| mm4_intergenic_Adtrp|Gm22157_chr13_41887219_R | Primer3: not found at this Tm | N.d. | 0.11 |
| mm3_intron_Trp63_chr16_25886728_F | Primer3: not found at this Tm | N.d. | 0.10 |
| mm3_intron_Trp63_chr16_25886728_R | Primer3: not found at this Tm | N.d. | 0.10 |
| mm4_intergenic_Shank3|Gm15609/Shank3_chr15_89513353_F | Primer3: not found at this Tm | N.d. | 0.10 |
| mm4_intergenic_Shank3|Gm15609/Shank3_chr15_89513353_R | Primer3: not found at this Tm | N.d. | 0.10 |
| mm4_intergenic_Hmgb1-ps9|Pik3r1_chr13_101505202_F | TCGTCGGCAGCGTCTTAAGGGTGGGAAAGGAAAAGA | 57.1 | 0.10 |
| mm4_intergenic_Hmgb1-ps9|Pik3r1_chr13_101505202_R | GTCTCGTGGGCTCGGCCCAGCCAAAAGTAGGGTGA | 59.5 | 0.10 |
| mm4_intron_Lmbr1_chr5_29362084_F | TCGTCGGCAGCGTCACTTACCAGCTAAAGGGAATATGT | 57.4 | 0.10 |
| mm4_intron_Lmbr1_chr5_29362084_R | GTCTCGTGGGCTCGGACGGCTAAGACACACCACTG | 59.9 | 0.10 |
| mm4_intergenic_Mettl21e|Gulp1_chr1_44425904_F | TCGTCGGCAGCGTCTGCTTTGCCCTTTCCTGAGT | 59.8 | 0.10 |
| mm4_intergenic_Mettl21e|Gulp1_chr1_44425904_R | GTCTCGTGGGCTCGGACAGCCAGTTGAAAGTGAGGA | 59.5 | 0.10 |
| mm4_intergenic_Gm17571|Maml2/Gm22643_chr9_13609864_F | Primer3: not found at this Tm | N.d. | 0.10 |
| mm4_intergenic_Gm17571|Maml2/Gm22643_chr9_13609864_R | Primer3: not found at this Tm | N.d. | 0.10 |
| mm4_intergenic_A730045E13Rik|Gm26714_chr8_24237937_F | TCGTCGGCAGCGTCATAGCCACGCGGACAATGAT | 59.8 | 0.10 |
| mm4_intergenic_A730045E13Rik|Gm26714_chr8_24237937_R | GTCTCGTGGGCTCGGTAGTGTGTAGCAGCGGGAAC | 59.7 | 0.10 |
| mm4_intergenic_Zic3|Gm14649_chrX_58144263_F | Primer3: not found at this Tm | N.d. | 0.10 |
| mm4_intergenic_Zic3|Gm14649_chrX_58144263_R | Primer3: not found at this Tm | N.d. | 0.10 |
| mm4_intron_Mfsd9_chr1_40775932_F | TCGTCGGCAGCGTCTGGGAGGAAGGGTACAGGAG | 59.9 | 0.10 |
| mm4_intron_Mfsd9_chr1_40775932_R | GTCTCGTGGGCTCGGCTCCTATGAGGGAATGTCTGCA | 59.2 | 0.10 |
| mm4_intergenic_C2cd3|Ucp3_chr7_100472736_F | Primer3: not found at this Tm | N.d. | 0.10 |
| mm4_intergenic_C2cd3|Ucp3_chr7_100472736_R | Primer3: not found at this Tm | N.d. | 0.10 |
| mm4_intergenic_Abcg2|Herc3_chr6_58749375_F | TCGTCGGCAGCGTCAAGGCAAGCAGAGCAGTAGG | 60.0 | 0.09 |
| mm4_intergenic_Abcg2|Herc3_chr6_58749375_R | GTCTCGTGGGCTCGGCCCAGCAGCTAAGAGGTCTG | 59.8 | 0.09 |
| mm4_intron_Iqub_chr6_24465135_F | TCGTCGGCAGCGTCTTCCTGGAAGGGCAAGTTCC | 59.8 | 0.09 |
| mm4_intron_Iqub_chr6_24465135_R | GTCTCGTGGGCTCGGGCATGGCAATCTCTCCTGGT | 60.1 | 0.09 |
| mm4_intergenic_Epha5|Gm24626_chr5_85336335_F | Primer3: not found at this Tm | N.d. | 0.09 |
| mm4_intergenic_Epha5|Gm24626_chr5_85336335_R | Primer3: not found at this Tm | N.d. | 0.09 |
| mm4_intron_Kcnd2_chr6_21316753_F | Primer3: not found at this Tm | N.d. | 0.09 |
| mm4_intron_Kcnd2_chr6_21316753_R | Primer3: not found at this Tm | N.d. | 0.09 |
| mm4_intron_Sec61a2_chr2_5892671_F | TCGTCGGCAGCGTCACACTTGGGCAGGAAACAGT | 59.7 | 0.09 |
| mm4_intron_Sec61a2_chr2_5892671_R | GTCTCGTGGGCTCGGTCTCTTTCCCTGTGGGTCTG | 58.6 | 0.09 |
| mm4_intergenic_4930564G21Rik|Grip1_chr10_119806449_F | TCGTCGGCAGCGTCGCCCCGCTGAGAGATTGATA | 59.3 | 0.09 |
| mm4_intergenic_4930564G21Rik|Grip1_chr10_119806449_R | GTCTCGTGGGCTCGGAATCCACAGCACAGGACAGC | 60.6 | 0.09 |
| mm4_intergenic_Gm24921|Fscb_chr12_64443166_F | Primer3: not found at this Tm | N.d. | 0.09 |
| mm4_intergenic_Gm24921|Fscb_chr12_64443166_R | Primer3: not found at this Tm | N.d. | 0.09 |
| mm4_intergenic_Gm11371|Gm11372_chr13_31156641_F | Primer3: not found at this Tm | N.d. | 0.09 |
| mm4_intergenic_Gm11371|Gm11372_chr13_31156641_R | Primer3: not found at this Tm | N.d. | 0.09 |
| mm4_intron_Sept11_chr5_93156203_F | TCGTCGGCAGCGTCCTTCTGCCTTGTCTGCTCCA | 59.9 | 0.09 |
| mm4_intron_Sept11_chr5_93156203_R | GTCTCGTGGGCTCGGTGGATGCATTTGTTCAGCTCC | 59.1 | 0.09 |
| mm4_intergenic_Eed/Gm26529|Gm5341_chr7_90015767_F | Primer3: not found at this Tm | N.d. | 0.09 |
| mm4_intergenic_Eed/Gm26529|Gm5341_chr7_90015767_R | Primer3: not found at this Tm | N.d. | 0.09 |
| mm4_intergenic_1600014K23Rik|Gm14765_chrX_85356941_F | Primer3: not found at this Tm | N.d. | 0.08 |
| mm4_intergenic_1600014K23Rik|Gm14765_chrX_85356941_R | Primer3: not found at this Tm | N.d. | 0.08 |
| mm4_intergenic_Zfp770|Gm25103_chr2_114269357_F | Primer3: not found at this Tm | N.d. | 0.08 |
| mm4_intergenic_Zfp770|Gm25103_chr2_114269357_R | Primer3: not found at this Tm | N.d. | 0.08 |
| mm4_intron_4930451C15Rik_chr16_17558954_F | Primer3: not found at this Tm | N.d. | 0.08 |
| mm4_intron_4930451C15Rik_chr16_17558954_R | Primer3: not found at this Tm | N.d. | 0.08 |
| mm4_intergenic_n-R5s30|Rbfox1_chr16_6338652_F | Primer3: not found at this Tm | N.d. | 0.08 |
| mm4_intergenic_n-R5s30|Rbfox1_chr16_6338652_R | Primer3: not found at this Tm | N.d. | 0.08 |
| mm4_intergenic_Cntnap4|Gm25766_chr8_113158137_F | Primer3: not found at this Tm | N.d. | 0.07 |
| mm4_intergenic_Cntnap4|Gm25766_chr8_113158137_R | Primer3: not found at this Tm | N.d. | 0.07 |
| mm4_intergenic_Dynlrb2|Cdyl2_chr8_116538488_F | Primer3: not found at this Tm | N.d. | 0.07 |
| mm4_intergenic_Dynlrb2|Cdyl2_chr8_116538488_R | Primer3: not found at this Tm | N.d. | 0.07 |
| mm4_intron_Prkdc_chr16_15781009_F | Primer3: not found at this Tm | N.d. | 0.07 |
| mm4_intron_Prkdc_chr16_15781009_R | Primer3: not found at this Tm | N.d. | 0.07 |
| mm4_intergenic_Gm26260|4930564G21Rik_chr10_119572375_F | TCGTCGGCAGCGTCCCTGGGCATATTGGGCGTAT | 59.9 | 0.07 |
| mm4_intergenic_Gm26260|4930564G21Rik_chr10_119572375_R | GTCTCGTGGGCTCGGGGCTAGCACCAGAAACAGCT | 60.3 | 0.07 |
| mm4_intergenic_Gm24710|Gm24889_chr10_37978023_F | Primer3: not found at this Tm | N.d. | 0.07 |
| mm4_intergenic_Gm24710|Gm24889_chr10_37978023_R | Primer3: not found at this Tm | N.d. | 0.07 |
| mm4_intergenic_Ccne1|Gm22203_chr7_38146998_F | TCGTCGGCAGCGTCGGTCTGTGAGTGTGACCTCC | 59.6 | 0.07 |
| mm4_intergenic_Ccne1|Gm22203_chr7_38146998_R | GTCTCGTGGGCTCGGTCACCACCAAGGAACCCAAG | 59.8 | 0.07 |
| mm4_intron_Gse1_chr8_120452341_F | TCGTCGGCAGCGTCTGTGGAGCAAGGCTTTCAGG | 60.5 | 0.07 |
| mm4_intron_Gse1_chr8_120452341_R | GTCTCGTGGGCTCGGCATACAGGAGGCCTTTGGGG | 60.1 | 0.07 |
| mm4_intron_Dcaf5_chr12_80406400_F | TCGTCGGCAGCGTCAGATAAGCTACATGGGCAGCA | 59.2 | 0.07 |
| mm4_intron_Dcaf5_chr12_80406400_R | GTCTCGTGGGCTCGGACCACTAGCTTGGCCATTCC | 60.0 | 0.07 |
| mm4_intergenic_Slitrk5|Gm22764_chr14_111756121_F | Primer3: not found at this Tm | N.d. | 0.07 |
| mm4_intergenic_Slitrk5|Gm22764_chr14_111756121_R | Primer3: not found at this Tm | N.d. | 0.07 |
| mm4_intron_Zbtb20_chr16_43274013_F | TCGTCGGCAGCGTCTCTCTGTTGATGGGCTAGAGC | 59.2 | 0.07 |
| mm4_intron_Zbtb20_chr16_43274013_R | GTCTCGTGGGCTCGGCGTTCAGGAAAATTTGGGGAGG | 59.7 | 0.07 |
| mm4_intergenic_Gm11923|Gm11925_chr4_30132083_F | Primer3: not found at this Tm | N.d. | 0.06 |
| mm4_intergenic_Gm11923|Gm11925_chr4_30132083_R | Primer3: not found at this Tm | N.d. | 0.06 |
| mm4_intergenic_Gm8824|Bbx_chr16_50182696_F | Primer3: not found at this Tm | N.d. | 0.06 |
| mm4_intergenic_Gm8824|Bbx_chr16_50182696_R | Primer3: not found at this Tm | N.d. | 0.06 |
| mm4_intron_Gm14486_chr2_30666971_F | Primer3: not found at this Tm | N.d. | 0.06 |
| mm4_intron_Gm14486_chr2_30666971_R | Primer3: not found at this Tm | N.d. | 0.06 |
| mm4_intron_Dmd_chrX_83373190_F | Primer3: not found at this Tm | N.d. | 0.06 |
| mm4_intron_Dmd_chrX_83373190_R | Primer3: not found at this Tm | N.d. | 0.06 |
| mm4_intergenic_Vangl2|Nhlh1_chr1_172049688_F | Primer3: not found at this Tm | N.d. | 0.06 |
| mm4_intergenic_Vangl2|Nhlh1_chr1_172049688_R | Primer3: not found at this Tm | N.d. | 0.06 |
| mm4_intergenic_Gm6893|Gm15270_chr10_24571459_F | TCGTCGGCAGCGTCTGAGTCTGGCTGCAGTACCT | 60.5 | 0.06 |
| mm4_intergenic_Gm6893|Gm15270_chr10_24571459_R | GTCTCGTGGGCTCGGGCGACACGAAGGTTACGTCT | 60.3 | 0.06 |
| mm4_intergenic_Igsf3|Atp1a1_chr3_101547670_F | TCGTCGGCAGCGTCCAGAACCTGTGCTGAGGAGG | 60.0 | 0.06 |
| mm4_intergenic_Igsf3|Atp1a1_chr3_101547670_R | GTCTCGTGGGCTCGGAGATCCAGGCCCTCTGAGAG | 60.1 | 0.06 |
| mm4_intron_Grik2_chr10_49369235_F | Primer3: not found at this Tm | N.d. | 0.06 |
| mm4_intron_Grik2_chr10_49369235_R | Primer3: not found at this Tm | N.d. | 0.06 |
| mm4_intron_Fam120b_chr17_15396643_F | Primer3: not found at this Tm | N.d. | 0.06 |
| mm4_intron_Fam120b_chr17_15396643_R | Primer3: not found at this Tm | N.d. | 0.06 |
| mm4_intron_St18_chr1_6852671_F | TCGTCGGCAGCGTCCCCATTTCACTCCTACCTGCA | 59.7 | 0.06 |
| mm4_intron_St18_chr1_6852671_R | GTCTCGTGGGCTCGGAGGCAATGGAGAAATGGGCA | 59.9 | 0.06 |
| mm4_intron_2310014F06Rik_chr7_112644146_F | Primer3: not found at this Tm | N.d. | 0.05 |
| mm4_intron_2310014F06Rik_chr7_112644146_R | Primer3: not found at this Tm | N.d. | 0.05 |
| mm4_intergenic_Ppp1r2-ps2|Nup210_chr6_90911029_F | Primer3: not found at this Tm | N.d. | 0.05 |
| mm4_intergenic_Ppp1r2-ps2|Nup210_chr6_90911029_R | Primer3: not found at this Tm | N.d. | 0.05 |
| mm4_intron_Adam12_chr7_133967202_F | TCGTCGGCAGCGTCGAGCCACTCACCAGATGCTT | 60.0 | 0.05 |
| mm4_intron_Adam12_chr7_133967202_R | GTCTCGTGGGCTCGGTGGGGAACATCTGTCTGCTG | 59.6 | 0.05 |
| mm4_intergenic_Syt14|Gm23583_chr1_192987831_F | Primer3: not found at this Tm | N.d. | 0.05 |
| mm4_intergenic_Syt14|Gm23583_chr1_192987831_R | Primer3: not found at this Tm | N.d. | 0.05 |
| mm4_intron_Pola2_chr19_5952219_F | TCGTCGGCAGCGTCCTCAGGCTCTTGCATCTTCC | 58.3 | 0.05 |
| mm4_intron_Pola2_chr19_5952219_R | GTCTCGTGGGCTCGGGGCTATGAATGACTTCCTCTGGA | 59.6 | 0.05 |
| mm4_intergenic_Sgcd|Gm23039_chr11_47823394_F | TCGTCGGCAGCGTCAACAGAAAATGTGCAAAGGCT | 57.1 | 0.05 |
| mm4_intergenic_Sgcd|Gm23039_chr11_47823394_R | GTCTCGTGGGCTCGGAAGTAGCGCCTAAGCTTGGG | 60.1 | 0.05 |
| mm4_intergenic_Gm8730|Cdh5_chr8_103750865_F | Primer3: not found at this Tm | N.d. | 0.05 |
| mm4_intergenic_Gm8730|Cdh5_chr8_103750865_R | Primer3: not found at this Tm | N.d. | 0.05 |
| mm3_exon_Ctif_chr18_75435106_F | TCGTCGGCAGCGTCTGCTCAGTTCTCTTTCCCGC | 60.3 | 0.05 |
| mm3_exon_Ctif_chr18_75435106_R | GTCTCGTGGGCTCGGAAACTGACAGCCTGACAGCC | 60.5 | 0.05 |
| mm4_intergenic_Igkv6-23|Gm11065_chr6_70267240_F | Primer3: not found at this Tm | N.d. | 0.05 |
| mm4_intergenic_Igkv6-23|Gm11065_chr6_70267240_R | Primer3: not found at this Tm | N.d. | 0.05 |
| mm4_intergenic_Gm26259|Pitrm1_chr13_6487494_F | Primer3: not found at this Tm | N.d. | 0.05 |
| mm4_intergenic_Gm26259|Pitrm1_chr13_6487494_R | Primer3: not found at this Tm | N.d. | 0.05 |
| mm4_intergenic_Ceacam1|Ceacam2_chr7_25510937_F | Primer3: not found at this Tm | N.d. | 0.05 |
| mm4_intergenic_Ceacam1|Ceacam2_chr7_25510937_R | Primer3: not found at this Tm | N.d. | 0.05 |
| mm4_intergenic_5830416P10Rik|Dusp5_chr19_53480953_F | Primer3: not found at this Tm | N.d. | 0.05 |
| mm4_intergenic_5830416P10Rik|Dusp5_chr19_53480953_R | Primer3: not found at this Tm | N.d. | 0.05 |
| mm4_intergenic_Phlda3|Tnni1_chr1_135781864_F | Primer3: not found at this Tm | N.d. | 0.05 |
| mm4_intergenic_Phlda3|Tnni1_chr1_135781864_R | Primer3: not found at this Tm | N.d. | 0.05 |
| mm4_intergenic_Guca2b|Hivep3_chr4_119704294_F | TCGTCGGCAGCGTCAGCTTCCTGGGCTGATGTTC | 60.0 | 0.05 |
| mm4_intergenic_Guca2b|Hivep3_chr4_119704294_R | GTCTCGTGGGCTCGGGCAGCTGCATCATGACATGG | 59.9 | 0.05 |
| mm4_intron_Gcnt4_chr13_96929396_F | Primer3: not found at this Tm | N.d. | 0.05 |
| mm4_intron_Gcnt4_chr13_96929396_R | Primer3: not found at this Tm | N.d. | 0.05 |
| mm4_intron_Myocd_chr11_65204755_F | Primer3: not found at this Tm | N.d. | 0.05 |
| mm4_intron_Myocd_chr11_65204755_R | Primer3: not found at this Tm | N.d. | 0.05 |
| mm4_intron_Pirt_chr11_66916562_F | Primer3: not found at this Tm | N.d. | 0.05 |
| mm4_intron_Pirt_chr11_66916562_R | Primer3: not found at this Tm | N.d. | 0.05 |
| mm4_intergenic_Fat4|Gm9845_chr3_39083201_F | Primer3: not found at this Tm | N.d. | 0.05 |
| mm4_intergenic_Fat4|Gm9845_chr3_39083201_R | Primer3: not found at this Tm | N.d. | 0.05 |
| mm4_intron_Gbp2_chr3_142631322_F | TCGTCGGCAGCGTCAGAGAGTGCCCCACTGAAGA | 60.1 | 0.05 |
| mm4_intron_Gbp2_chr3_142631322_R | GTCTCGTGGGCTCGGTACATCCCTGCCTGGCAAAG | 60.0 | 0.05 |
| mm4_intergenic_Gm8244|Gm6754_chrX_62997108_F | TCGTCGGCAGCGTCCCCAGGAGCCATGTTGTCTG | 60.6 | 0.04 |
| mm4_intergenic_Gm8244|Gm6754_chrX_62997108_R | GTCTCGTGGGCTCGGTAGATCTGTGGCCTGGGGAA | 59.9 | 0.04 |
| mm4_intergenic_Gm14624|Gm22103_chrX_56031244_F | TCGTCGGCAGCGTCAGGTTGTAGGCATGGTGTGG | 59.9 | 0.04 |
| mm4_intergenic_Gm14624|Gm22103_chrX_56031244_R | GTCTCGTGGGCTCGGCCCAGGAGCCATGTTGTCTG | 60.6 | 0.04 |
| mm3_intergenic_Kcne1|Rcan1_chr16_92361524_F | Primer3: not found at this Tm | N.d. | 0.04 |
| mm3_intergenic_Kcne1|Rcan1_chr16_92361524_R | Primer3: not found at this Tm | N.d. | 0.04 |
| mm4_intergenic_Enpep|Elovl6_chr3_129414706_F | Primer3: not found at this Tm | N.d. | 0.04 |
| mm4_intergenic_Enpep|Elovl6_chr3_129414706_R | Primer3: not found at this Tm | N.d. | 0.04 |
| mm4_intergenic_Gm2574|Gm24728_chr3_143628018_F | Primer3: not found at this Tm | N.d. | 0.04 |
| mm4_intergenic_Gm2574|Gm24728_chr3_143628018_R | Primer3: not found at this Tm | N.d. | 0.04 |
| mm4_intron_Cep128_chr12_91383886_F | Primer3: not found at this Tm | N.d. | 0.04 |
| mm4_intron_Cep128_chr12_91383886_R | Primer3: not found at this Tm | N.d. | 0.04 |
| mm4_intron_Spag16_chr1_70191424_F | Primer3: not found at this Tm | N.d. | 0.04 |
| mm4_intron_Spag16_chr1_70191424_R | Primer3: not found at this Tm | N.d. | 0.04 |
| mm4_intergenic_Mex3b|Gm22934_chr7_82893587_F | TCGTCGGCAGCGTCTGTGTTTGGGAAGCCTACCA | 59.1 | 0.04 |
| mm4_intergenic_Mex3b|Gm22934_chr7_82893587_R | GTCTCGTGGGCTCGGTCTTTCCATACAGCAGAAGAGGA | 58.9 | 0.04 |
| mm4_intron_Necab2_chr8_119454632_F | TCGTCGGCAGCGTCAAGAGCGGAGATAAGCCACG | 59.8 | 0.04 |
| mm4_intron_Necab2_chr8_119454632_R | GTCTCGTGGGCTCGGAGACTTCCACTCCAGGACCA | 59.8 | 0.04 |
| mm4_intergenic_Gm6457|Ss18_chr18_14600331_F | TCGTCGGCAGCGTCAAGATGCCACCAGAGACACC | 59.6 | 0.04 |
| mm4_intergenic_Gm6457|Ss18_chr18_14600331_R | GTCTCGTGGGCTCGGGCATGCAACCTTCTGTGCTC | 60.1 | 0.04 |
| mm4_intergenic_2510009E07Rik|Ehhadh_chr16_21718673_F | TCGTCGGCAGCGTCACAGTCCATCCCTCTACCCA | 59.2 | 0.04 |
| mm4_intergenic_2510009E07Rik|Ehhadh_chr16_21718673_R | GTCTCGTGGGCTCGGTGCAAGGGGAGAAGTTGGTG | 60.1 | 0.04 |
| mm4_intergenic_Gm23280|Gm14706_chrX_76845753_F | Primer3: not found at this Tm | N.d. | 0.04 |
| mm4_intergenic_Gm23280|Gm14706_chrX_76845753_R | Primer3: not found at this Tm | N.d. | 0.04 |
| mm4_intron_9130019P16Rik_chr6_54397583_F | TCGTCGGCAGCGTCGGCTCAAGGCTGATCCAAGT | 60.0 | 0.04 |
| mm4_intron_9130019P16Rik_chr6_54397583_R | GTCTCGTGGGCTCGGGGCAACTCCAGGTGGATGAA | 59.9 | 0.04 |
| mm4_intergenic_Gm4944|Zfp944_chr17_22263377_F | Primer3: not found at this Tm | N.d. | 0.04 |
| mm4_intergenic_Gm4944|Zfp944_chr17_22263377_R | Primer3: not found at this Tm | N.d. | 0.04 |
| mm4_intergenic_Gm17131|Tmem132d_chr5_127952178_F | TCGTCGGCAGCGTCTCTCAAAACAGACCCTGGGG | 59.2 | 0.04 |
| mm4_intergenic_Gm17131|Tmem132d_chr5_127952178_R | GTCTCGTGGGCTCGGCCCAGCATCCTCTCTGTGTG | 60.1 | 0.04 |
| mm4_intergenic_BC147527|Tcstv3_chr13_120309618_F | Primer3: not found at this Tm | N.d. | 0.04 |
| mm4_intergenic_BC147527|Tcstv3_chr13_120309618_R | Primer3: not found at this Tm | N.d. | 0.04 |
| mm4_intergenic_mmu-mir-21c|Nrp1/Mir1903_chr8_128332167_F | TCGTCGGCAGCGTCAGTGTAGACAAAATGGTCCCTGA | 59.3 | 0.04 |
| mm4_intergenic_mmu-mir-21c|Nrp1/Mir1903_chr8_128332167_R | GTCTCGTGGGCTCGGTTCAGCTGCTACCACACCTG | 59.9 | 0.04 |
| mm4_intron_Gramd3_chr18_56458758_F | Primer3: not found at this Tm | N.d. | 0.04 |
| mm4_intron_Gramd3_chr18_56458758_R | Primer3: not found at this Tm | N.d. | 0.04 |
| mm3_intergenic_Rftn2/Gm10561|Gm10561_chr1_55226821_F | Primer3: not found at this Tm | N.d. | 0.04 |
| mm3_intergenic_Rftn2/Gm10561|Gm10561_chr1_55226821_R | Primer3: not found at this Tm | N.d. | 0.04 |
| mm4_intron_Mpp7_chr18_7387587_F | TCGTCGGCAGCGTCAGGAAGGGAGGGCTGAGATT | 59.9 | 0.03 |
| mm4_intron_Mpp7_chr18_7387587_R | GTCTCGTGGGCTCGGGGAATCCATAGCCCTCGTGG | 59.9 | 0.03 |
| mm3_intron_Nipal2_chr15_34603062_F | Primer3: not found at this Tm | N.d. | 0.03 |
| mm3_intron_Nipal2_chr15_34603062_R | Primer3: not found at this Tm | N.d. | 0.03 |
| mm4_intron_Nrg2_chr18_36154357_F | Primer3: not found at this Tm | N.d. | 0.03 |
| mm4_intron_Nrg2_chr18_36154357_R | Primer3: not found at this Tm | N.d. | 0.03 |
| mm4_intergenic_Gm13855|Gm14546_chr6_34248565_F | Primer3: not found at this Tm | N.d. | 0.03 |
| mm4_intergenic_Gm13855|Gm14546_chr6_34248565_R | Primer3: not found at this Tm | N.d. | 0.03 |
| mm4_intron_Itm2b_chr14_73380301_F | TCGTCGGCAGCGTCTGGTTTGGGAACGATGTCCT | 59.2 | 0.03 |
| mm4_intron_Itm2b_chr14_73380301_R | GTCTCGTGGGCTCGGCTAGGTAGCCCAGGCCCTTA | 60.1 | 0.03 |
| mm4_intergenic_Gm14558|Slc6a14_chrX_21706206_F | TCGTCGGCAGCGTCAGTGGAGGACTTTTGAAAAGACA | 58.1 | 0.03 |
| mm4_intergenic_Gm14558|Slc6a14_chrX_21706206_R | GTCTCGTGGGCTCGGAGCAAAGTGGTCAGTGCCTC | 60.5 | 0.03 |
| mm3_intergenic_Nipal2|Kcns2_chr15_34744174_F | Primer3: not found at this Tm | N.d. | 0.03 |
| mm3_intergenic_Nipal2|Kcns2_chr15_34744174_R | Primer3: not found at this Tm | N.d. | 0.03 |
| mm3_intron_Dgat2_chr7_99162328_F | Primer3: not found at this Tm | N.d. | 0.03 |
| mm3_intron_Dgat2_chr7_99162328_R | Primer3: not found at this Tm | N.d. | 0.03 |
| mm4_intron_Cse1l_chr2_166906973_F | Primer3: not found at this Tm | N.d. | 0.03 |
| mm4_intron_Cse1l_chr2_166906973_R | Primer3: not found at this Tm | N.d. | 0.03 |
| mm4_intergenic_Gramd1b|Gramd1b/Gm17540_chr9_40481091_F | Primer3: not found at this Tm | N.d. | 0.03 |
| mm4_intergenic_Gramd1b|Gramd1b/Gm17540_chr9_40481091_R | Primer3: not found at this Tm | N.d. | 0.03 |
| mm4_intron_Armc8_chr9_99488240_F | Primer3: not found at this Tm | N.d. | 0.03 |
| mm4_intron_Armc8_chr9_99488240_R | Primer3: not found at this Tm | N.d. | 0.03 |
| mm4_intron_Aff2_chrX_69745688_F | Primer3: not found at this Tm | N.d. | 0.03 |
| mm4_intron_Aff2_chrX_69745688_R | Primer3: not found at this Tm | N.d. | 0.03 |
| mm4_intergenic_Npy2r|Gm22038_chr3_82570303_F | Primer3: not found at this Tm | N.d. | 0.03 |
| mm4_intergenic_Npy2r|Gm22038_chr3_82570303_R | Primer3: not found at this Tm | N.d. | 0.03 |
| mm4_intergenic_Gm6395|Gm527_chr12_64906405_F | Primer3: not found at this Tm | N.d. | 0.03 |
| mm4_intergenic_Gm6395|Gm527_chr12_64906405_R | Primer3: not found at this Tm | N.d. | 0.03 |
| mm4_intron_Tmem132b_chr5_125767867_F | Primer3: not found at this Tm | N.d. | 0.03 |
| mm4_intron_Tmem132b_chr5_125767867_R | Primer3: not found at this Tm | N.d. | 0.03 |
| mm4_intergenic_2810407A14Rik|Grik1_chr16_87878938_F | TCGTCGGCAGCGTCGAGGCTTAGAACTGCTTTGGC | 59.5 | 0.03 |
| mm4_intergenic_2810407A14Rik|Grik1_chr16_87878938_R | GTCTCGTGGGCTCGGAGAAAGAGGAAAGGAGTTGAGGA | 58.7 | 0.03 |
| mm4_intergenic_Sult5a1|Dpep1_chr8_123184046_F | Primer3: not found at this Tm | N.d. | 0.03 |
| mm4_intergenic_Sult5a1|Dpep1_chr8_123184046_R | Primer3: not found at this Tm | N.d. | 0.03 |
| mm4_intergenic_Gm22433|Mme_chr3_63265053_F | Primer3: not found at this Tm | N.d. | 0.03 |
| mm4_intergenic_Gm22433|Mme_chr3_63265053_R | Primer3: not found at this Tm | N.d. | 0.03 |
| mm4_intron_Lrrk2_chr15_91781106_F | Primer3: not found at this Tm | N.d. | 0.03 |
| mm4_intron_Lrrk2_chr15_91781106_R | Primer3: not found at this Tm | N.d. | 0.03 |
| mm4_exon_Serpine3_chr14_62672994_F | TCGTCGGCAGCGTCCCCAGATAGCCCGTTGTGG | 60.1 | 0.02 |
| mm4_exon_Serpine3_chr14_62672994_R | GTCTCGTGGGCTCGGGCTGCAGGACCACAGAGAAT | 60.0 | 0.02 |
| mm4_intron_Rhobtb1_chr10_69259292_F | TCGTCGGCAGCGTCTCCTTGTACTTTCCCTTCCTGAC | 59.6 | 0.02 |
| mm4_intron_Rhobtb1_chr10_69259292_R | GTCTCGTGGGCTCGGTTTTGCGGAGTTGGTGGAGT | 60.1 | 0.02 |
| mm3_intergenic_Gm20594|Gm4409_chr6_79895208_F | TCGTCGGCAGCGTCGTTGGTGAGACGGGTGAAGA | 59.6 | 0.02 |
| mm3_intergenic_Gm20594|Gm4409_chr6_79895208_R | GTCTCGTGGGCTCGGGTGTATGAGTGCACACCTGC | 59.2 | 0.02 |
| mm4_intergenic_Snap25|Gm14053_chr2_136714080_F | Primer3: not found at this Tm | N.d. | 0.02 |
| mm4_intergenic_Snap25|Gm14053_chr2_136714080_R | Primer3: not found at this Tm | N.d. | 0.02 |
| mm4_exon_Arrb1_chr7_99601475_F | TCGTCGGCAGCGTCATGCTCATTCCCAGGAAGGC | 60.1 | 0.02 |
| mm4_exon_Arrb1_chr7_99601475_R | GTCTCGTGGGCTCGGCCCTCCACATCTTCACACCC | 60.0 | 0.02 |
| mm4_intergenic_St3gal1|Zfat_chr15_67883721_F | Primer3: not found at this Tm | N.d. | 0.02 |
| mm4_intergenic_St3gal1|Zfat_chr15_67883721_R | Primer3: not found at this Tm | N.d. | 0.02 |
| mm4_intergenic_Itm2b|Med4_chr14_73385618_F | Primer3: not found at this Tm | N.d. | 0.02 |
| mm4_intergenic_Itm2b|Med4_chr14_73385618_R | Primer3: not found at this Tm | N.d. | 0.02 |
| mm4_intron_Trappc10_chr10_78217392_F | Primer3: not found at this Tm | N.d. | 0.02 |
| mm4_intron_Trappc10_chr10_78217392_R | Primer3: not found at this Tm | N.d. | 0.02 |
| mm4_intron_Nkd1_chr8_88528762_F | TCGTCGGCAGCGTCGCATCCCGTGACATCAGCTA | 59.8 | 0.02 |
| mm4_intron_Nkd1_chr8_88528762_R | GTCTCGTGGGCTCGGAACCTGCAACCACTCTGACA | 59.4 | 0.02 |
| mm4_intergenic_Gm22976|Ppargc1a_chr5_51439124_F | TCGTCGGCAGCGTCTGCAGAAAAGTGTGACGGAGA | 59.8 | 0.02 |
| mm4_intergenic_Gm22976|Ppargc1a_chr5_51439124_R | GTCTCGTGGGCTCGGCACTTAATGACAACAGCCACCA | 59.1 | 0.02 |
| mm4_intron_Trf/Gm20425_chr9_103214176_F | Primer3: not found at this Tm | N.d. | 0.02 |
| mm4_intron_Trf/Gm20425_chr9_103214176_R | Primer3: not found at this Tm | N.d. | 0.02 |
| mm4_intron_Atp8a2_chr14_59814506_F | TCGTCGGCAGCGTCAGGACTGAGGAGAGGGATGC | 60.3 | 0.02 |
| mm4_intron_Atp8a2_chr14_59814506_R | GTCTCGTGGGCTCGGGCCCTTCATAGCTAGCTTCCA | 59.5 | 0.02 |
| mm4_exon_Dopey1_chr9_86512689_F | Primer3: not found at this Tm | N.d. | 0.02 |
| mm4_exon_Dopey1_chr9_86512689_R | Primer3: not found at this Tm | N.d. | 0.02 |
| mm4_intergenic_Gm13317|Plxdc2_chr2_16314332_F | TCGTCGGCAGCGTCACATGAACAAGTTCCAAGATACAGA | 58.4 | 0.02 |
| mm4_intergenic_Gm13317|Plxdc2_chr2_16314332_R | GTCTCGTGGGCTCGGCCAACGCACCTCCTACTACC | 59.8 | 0.02 |
| mm4_intergenic_Gm12947|4930471C06Rik_chr4_127431150_F | TCGTCGGCAGCGTCTCACCTAGGAAGTGGCAGAGA | 59.9 | 0.02 |
| mm4_intergenic_Gm12947|4930471C06Rik_chr4_127431150_R | GTCTCGTGGGCTCGGAGTAAGGAAGGTGAAAGAGAATCAC | 58.5 | 0.02 |
| mm4_intron_Esr1_chr10_4779568_F | Primer3: not found at this Tm | N.d. | 0.02 |
| mm4_intron_Esr1_chr10_4779568_R | Primer3: not found at this Tm | N.d. | 0.02 |
| mm4_intergenic_Gm14645|Gm16436_chrX_58436723_F | Primer3: not found at this Tm | N.d. | 0.02 |
| mm4_intergenic_Gm14645|Gm16436_chrX_58436723_R | Primer3: not found at this Tm | N.d. | 0.02 |
| mm4_intron_Mlycd_chr8_119400355_F | Primer3: not found at this Tm | N.d. | 0.02 |
| mm4_intron_Mlycd_chr8_119400355_R | Primer3: not found at this Tm | N.d. | 0.02 |
| mm4_intergenic_Smad2|Skor2_chr18_76392972_F | Primer3: not found at this Tm | N.d. | 0.02 |
| mm4_intergenic_Smad2|Skor2_chr18_76392972_R | Primer3: not found at this Tm | N.d. | 0.02 |
| mm4_intron_Prdm16_chr4_154365000_F | Primer3: not found at this Tm | N.d. | 0.02 |
| mm4_intron_Prdm16_chr4_154365000_R | Primer3: not found at this Tm | N.d. | 0.02 |
| mm4_intergenic_Bank1|Ppp3ca_chr3_136341378_F | Primer3: not found at this Tm | N.d. | 0.02 |
| mm4_intergenic_Bank1|Ppp3ca_chr3_136341378_R | Primer3: not found at this Tm | N.d. | 0.02 |
| mm4_intron_Clcn5_chrX_7166693_F | Primer3: not found at this Tm | N.d. | 0.01 |
| mm4_intron_Clcn5_chrX_7166693_R | Primer3: not found at this Tm | N.d. | 0.01 |
| mm4_intergenic_Gm8888|Slc38a4_chr15_96931183_F | Primer3: not found at this Tm | N.d. | 0.01 |
| mm4_intergenic_Gm8888|Slc38a4_chr15_96931183_R | Primer3: not found at this Tm | N.d. | 0.01 |
| mm4_intergenic_Gm12650|Gm12651_chr4_93888069_F | Primer3: not found at this Tm | N.d. | 0.01 |
| mm4_intergenic_Gm12650|Gm12651_chr4_93888069_R | Primer3: not found at this Tm | N.d. | 0.01 |
| mm4_intergenic_Gm10247|Grin2a_chr16_9128743_F | TCGTCGGCAGCGTCCAGTTGCTCCTCCCTTGACC | 60.3 | 0.01 |
| mm4_intergenic_Gm10247|Grin2a_chr16_9128743_R | GTCTCGTGGGCTCGGCCCCACAACAGAACTCACCA | 59.8 | 0.01 |
| mm4_intergenic_Gm23454|Arx_chrX_93281727_F | TCGTCGGCAGCGTCAAACTGTATGCGGACCCCTC | 59.7 | 0.01 |
| mm4_intergenic_Gm23454|Arx_chrX_93281727_R | GTCTCGTGGGCTCGGGAGGGAAACTTCTCAGCCCC | 60.0 | 0.01 |
| mm4_intergenic_Snx29|Cpped1_chr16_11776866_F | TCGTCGGCAGCGTCAGGGGCAGCAAATGAAAGGA | 59.8 | 0.01 |
| mm4_intergenic_Snx29|Cpped1_chr16_11776866_R | GTCTCGTGGGCTCGGCATGTCCCCTTCCCTCCTCT | 60.3 | 0.01 |
| mm4_intergenic_Jhdm1d|Gm26008_chr6_39221649_F | Primer3: not found at this Tm | N.d. | 0.01 |
| mm4_intergenic_Jhdm1d|Gm26008_chr6_39221649_R | Primer3: not found at this Tm | N.d. | 0.01 |
| mm4_intergenic_Tmem45b|Barx2_chr9_31613803_F | Primer3: not found at this Tm | N.d. | 0.01 |
| mm4_intergenic_Tmem45b|Barx2_chr9_31613803_R | Primer3: not found at this Tm | N.d. | 0.01 |
| mm4_intron_Klhdc1_chr12_69251627_F | TCGTCGGCAGCGTCCCCACACATGTGCAAATGGT | 59.3 | 0.01 |
| mm4_intron_Klhdc1_chr12_69251627_R | GTCTCGTGGGCTCGGCTAATTGAGGTGGGGTGGGG | 59.7 | 0.01 |
| mm3_intergenic_Tab2|Ust_chr10_8059285_F | TCGTCGGCAGCGTCTTCAGTGGATGGGGCTTTGG | 60.2 | 0.01 |
| mm3_intergenic_Tab2|Ust_chr10_8059285_R | GTCTCGTGGGCTCGGGTGTTTAGGTGTGTGCTTTCCA | 59.3 | 0.01 |
| mm3_intergenic_Gm13546|Cytip_chr2_58193194_F | Primer3: not found at this Tm | N.d. | 0.01 |
| mm3_intergenic_Gm13546|Cytip_chr2_58193194_R | Primer3: not found at this Tm | N.d. | 0.01 |
| mm4_intron_Ncam1_chr9_49792418_F | TCGTCGGCAGCGTCTAACCTGCATGGCCAACAGA | 59.5 | 0.01 |
| mm4_intron_Ncam1_chr9_49792418_R | GTCTCGTGGGCTCGGTGGTTGCTAAGTGTCCCAACA | 59.7 | 0.01 |
| mm4_intron_Zfp182_chrX_21047252_F | Primer3: not found at this Tm | N.d. | 0.01 |
| mm4_intron_Zfp182_chrX_21047252_R | Primer3: not found at this Tm | N.d. | 0.01 |
| mm4_intergenic_Kazn|Gm13062_chr4_142176412_F | Primer3: not found at this Tm | N.d. | 0.01 |
| mm4_intergenic_Kazn|Gm13062_chr4_142176412_R | Primer3: not found at this Tm | N.d. | 0.01 |
| mm4_intron_Dgkd_chr1_87913673_F | Primer3: not found at this Tm | N.d. | 0.01 |
| mm4_intron_Dgkd_chr1_87913673_R | Primer3: not found at this Tm | N.d. | 0.01 |
| mm4_intergenic_Gm14635|Rpl30-ps11_chrX_12355994_F | Primer3: not found at this Tm | N.d. | 0.01 |
| mm4_intergenic_Gm14635|Rpl30-ps11_chrX_12355994_R | Primer3: not found at this Tm | N.d. | 0.01 |
| mm4_intergenic_Gm23228|Fbxo4_chr15_3900613_F | Primer3: not found at this Tm | N.d. | 0.01 |
| mm4_intergenic_Gm23228|Fbxo4_chr15_3900613_R | Primer3: not found at this Tm | N.d. | 0.01 |
| mm4_intergenic_Gm26070|Slit3_chr11_35231461_F | TCGTCGGCAGCGTCTTAACCTGCCTTGCCTCCTG | 59.9 | 0.01 |
| mm4_intergenic_Gm26070|Slit3_chr11_35231461_R | GTCTCGTGGGCTCGGTGATGTGACTCTGGCACTGG | 59.6 | 0.01 |
| mm4_intergenic_Rnf138|Mep1b_chr18_21054753_F | TCGTCGGCAGCGTCTCTGAGCTTTCCCTTCTCCAC | 59.3 | 0.01 |
| mm4_intergenic_Rnf138|Mep1b_chr18_21054753_R | GTCTCGTGGGCTCGGTAACAAGTGGGGCCTGGTTG | 60.1 | 0.01 |
| mm4_intron_Camta1_chr4_151519360_F | TCGTCGGCAGCGTCGGGCTGGAGAAGTGTCTGTG | 60.3 | 0.01 |
| mm4_intron_Camta1_chr4_151519360_R | GTCTCGTGGGCTCGGCTCCACCGTGAGCCATTTTG | 59.4 | 0.01 |
| mm4_intergenic_Gm22242|Ddx10_chr9_52919105_F | Primer3: not found at this Tm | N.d. | 0.01 |
| mm4_intergenic_Gm22242|Ddx10_chr9_52919105_R | Primer3: not found at this Tm | N.d. | 0.01 |
| mm4_intron_Cntnap5c_chr17_58124555_F | Primer3: not found at this Tm | N.d. | 0.01 |
| mm4_intron_Cntnap5c_chr17_58124555_R | Primer3: not found at this Tm | N.d. | 0.01 |
| mm4_exon_Fhod1_chr8_105329333_F | TCGTCGGCAGCGTCTGTTCACAATACTGGTTTCTGGG | 58.8 | 0.01 |
| mm4_exon_Fhod1_chr8_105329333_R | GTCTCGTGGGCTCGGGAGGTGTGAGGTGCTACCAC | 60.0 | 0.01 |
| mm4_intron_Kcnh1_chr1_192325995_F | Primer3: not found at this Tm | N.d. | 0.00 |
| mm4_intron_Kcnh1_chr1_192325995_R | Primer3: not found at this Tm | N.d. | 0.00 |
| mm4_intergenic_Gm24244|Gm15405_chr17_92020160_F | Primer3: not found at this Tm | N.d. | 0.00 |
| mm4_intergenic_Gm24244|Gm15405_chr17_92020160_R | Primer3: not found at this Tm | N.d. | 0.00 |
| mm4_exon_Hnrnpm_chr17_33646611_F | TCGTCGGCAGCGTCAGCCACCTCTGGAGACTCAA | 60.1 | 0.00 |
| mm4_exon_Hnrnpm_chr17_33646611_R | GTCTCGTGGGCTCGGTGCGTGTGGTCTCTTCTTCC | 59.9 | 0.00 |
| mm4_exon_Map2k2_chr10_81121052_F | TCGTCGGCAGCGTCAGGACCGGCTCTCTCAAGAT | 60.0 | 0.00 |
| mm4_exon_Map2k2_chr10_81121052_R | GTCTCGTGGGCTCGGGTCCAGCAGCTCAAAGATGG | 58.9 | 0.00 |
| mm3_exon_Nrp2_chr1_62785024_F | TCGTCGGCAGCGTCCACACCGGATGAACCAGGAA | 59.9 | 0.00 |
| mm3_exon_Nrp2_chr1_62785024_R | GTCTCGTGGGCTCGGATCTCTCCCGATCGTCCCTT | 59.8 | 0.00 |
| mm4_intergenic_Grik1|Cldn17_chr16_88488638_F | TCGTCGGCAGCGTCACCAAAACATATGGGGCCGT | 59.9 | 0.00 |
| mm4_intergenic_Grik1|Cldn17_chr16_88488638_R | GTCTCGTGGGCTCGGTACTTCCTCTGCTCTGCCCT | 59.9 | 0.00 |
| mm4_intergenic_Gm23494|Gm15679_chr8_98724372_F | Primer3: not found at this Tm | N.d. | 0.00 |
| mm4_intergenic_Gm23494|Gm15679_chr8_98724372_R | Primer3: not found at this Tm | N.d. | 0.00 |
| mm4_intergenic_Gm11680|BC006965_chr11_112499946_F | Primer3: not found at this Tm | N.d. | 0.00 |
| mm4_intergenic_Gm11680|BC006965_chr11_112499946_R | Primer3: not found at this Tm | N.d. | 0.00 |
| mm4_intron_1500016L03Rik_chr11_84530629_F | TCGTCGGCAGCGTCAGCCGGAGAGGTTTAGCATG | 59.8 | 0.00 |
| mm4_intron_1500016L03Rik_chr11_84530629_R | GTCTCGTGGGCTCGGCCCTCGTCTTTGGTCTAGCC | 59.8 | 0.00 |
| mm4_intron_Lgr6_chr1_135057290_F | Primer3: not found at this Tm | N.d. | 0.00 |
| mm4_intron_Lgr6_chr1_135057290_R | Primer3: not found at this Tm | N.d. | 0.00 |
| mm4_intron_Stard8_chrX_99022492_F | Primer3: not found at this Tm | N.d. | 0.00 |
| mm4_intron_Stard8_chrX_99022492_R | Primer3: not found at this Tm | N.d. | 0.00 |
| mm4_intron_Smurf2_chr11_106872774_F | Primer3: not found at this Tm | N.d. | 0.00 |
| mm4_intron_Smurf2_chr11_106872774_R | Primer3: not found at this Tm | N.d. | 0.00 |
| mm4_intergenic_Ovol2|Ovol2/1700108N11Rik_chr2_144318605_F | TCGTCGGCAGCGTCGAGTAGGGGAGGACGGAGAG | 60.1 | 0.00 |
| mm4_intergenic_Ovol2|Ovol2/1700108N11Rik_chr2_144318605_R | GTCTCGTGGGCTCGGACCAGGTGACCCATATCCCA | 59.9 | 0.00 |
| mm4_intergenic_Gm15163|Gm22666_chrX_157025186_F | Primer3: not found at this Tm | N.d. | 0.00 |
| mm4_intergenic_Gm15163|Gm22666_chrX_157025186_R | Primer3: not found at this Tm | N.d. | 0.00 |
| mm4_intergenic_Gm11207|4930507D10Rik_chr11_80829338_F | Primer3: not found at this Tm | N.d. | 0.00 |
| mm4_intergenic_Gm11207|4930507D10Rik_chr11_80829338_R | Primer3: not found at this Tm | N.d. | 0.00 |
| mm4_intergenic_Gfra2|Gm9192_chr14_71277184_F | TCGTCGGCAGCGTCCTTGTGGGCTCTGTCAGGTT | 59.8 | 0.00 |
| mm4_intergenic_Gfra2|Gm9192_chr14_71277184_R | GTCTCGTGGGCTCGGACTGACTCCCCAGTTACCCT | 59.5 | 0.00 |
| mm4_intergenic_Adora1/Mybph|Adora1_chr1_134213294_F | Primer3: not found at this Tm | N.d. | 0.00 |
| mm4_intergenic_Adora1/Mybph|Adora1_chr1_134213294_R | Primer3: not found at this Tm | N.d. | 0.00 |
These only list off-targets that have primers in the table above. Primers underlined, off-targets in bold.
| ontarget_mm0_exon_5730457N03Rik/Evx1_chr6_52313843 |
AGGGAGCCTGGGATTAGGAGCTTACTTGGGGGTTTTCCCCCTCCCCCCCTCTGGAGAGTCCGGGGATGGAGAGCCGAAAG GACATGGTTATGTTTCTGGATGGGGGTCAGCTTGGCACTCTGGTTGGTA |
| mm3_intergenic_Gm26326|Dnajb9_chr12_44032992 |
AAGAGCAATTCCCGATCAGAATATGTCATAGATAAAGAATAGGAGGGATGGGAAGCAGAAAGGACAGGGTTTCCTCTGGT TATAGCACTAACTTCAGTGCACATGTATTTTCTGAAGCAGTTTCCCCTTGAATCCA |
| mm4_intron_Tek_chr4_94769033 |
TGTCGGGCTGGGGTATCTTATCCCTGCGTATCCCTGTTCTTTTTGCTGTCCATCTTTTCCTACTTTTTGATTACTTCTTT TCAGTCTCTTTTCTCCATCATCCTAGTTTCTCTTGGTGCTATGCTGACA |
| mm3_intron_Scn8a_chr15_100985124 |
TGGGCAAAATGTCTCTGGGTGATCTGTGTTAGGACTCTAGGAAGCTGTTGACTGTACAGATAAAGATCCGAAAGGACAGG GCTGGTATATGGAACTTAATGGAAGCAGAGGTATATCTGGCATGCCCA |
| mm4_intergenic_Sel1l3|Smim20_chr5_53266578 |
CCCATAACCCAGCACACACAATATGGAGAGCAAAGAGGACAAGGGATCAAAGTTAGATCACTTACTGTGCTCAAACACCC TCCAGGAA |
| mm4_intergenic_Frmd4a|Gm13187_chr2_4194180 |
AGCAGAAATGTTGGTAGACTGGATGATGGAGAGACAGAAGGACTGGGACACACATACAACAAAATTCAAACCTGGCTGAT TTGCTTGTCTCCTGGGAGTTGAGTAGAATGGAACCAGGATCTGCCTCGTCCTGAAG |
| mm3_intergenic_Trabd2b|Gm12829_chr4_114661211 |
CACAGTCCCTGTAGGCCAAGAGAAGTCATCGCTCCTTCATATCTGAGCTCTATGAAGGACAGGGCCATGTCCTCTCTTCT CTCCATCCTGTCTCTGTTCTCAGGCAGGGTCAG |
| mm3_intergenic_Tbx20|Gm23893_chr9_24850071 |
AATGTAGCAGGAGAGTGGGGCATGGAGAGCACAAAGGACAGGGATTCATCTAATCCCCCAGCCAGTCTTAAGAAGCAGTG CTCTCAACCGGGAACACTCTGCAGTTGGA |
| mm4_intergenic_Hpse2|Cnnm1_chr19_43418947 |
GTTACCAGAACCTACAAACCATTGTTGGCTTGCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNTGGCGGCAAATAGCCAGACAGACCACACTGGAA |
| mm3_intergenic_Atp2a3|P2rx1_chr11_72997574 |
GGAGTATGGGAGAGGGCGGCTGTGGCATGAAGCAACATACTGGACAATGACTGCCTTCCTTTTCCTTTCTTCTCTCCATC CTTTCTCTTCTCCCTCAATTGGAGCAGGTCCCTCTCT |
| mm4_intergenic_Gm24963|Gm10742_chr3_17320623 |
AGAGGGAGGCACTGACTTCATAGTAACAGTTTTAAAACCTATTTCTTTGAGAACCCTTGTTCTCTTGGTTCTCCATCAAT TTAAAGACATTGGTTAAGTAAATGAACAAAATGTTAAATGCAAGCTAAACAAAGACTGCA |
| mm3_intergenic_Gm25226|Plxnb3_chrX_73756754 |
TGGGGAAAATTGGCTCAAGGAAACCCTGTCCTTTTGTCTCTACATCCCAGGGGGTTTCTCCCTGGAGATGGGGAGTGGCA GGGAGCTCCCTGGCTAGAACAGCCAGAGTGGGGGTAAGAACACCAGATAGCAGGTCCCT |
| mm4_intergenic_Syn2|Pparg_chr6_115345796 |
ACACGATCTCCCTCCCACAATACAAAAAATAATGTCACAAAGGTGAATCTTAGATACATATTGACAATAAAGAGCTGAAA GGACACGGTGGGCGAAAGTCCTAACTAACT |
| mm4_intron_Nsd1_chr13_55289192 |
TGATGACTCTGTCTCAGGAAGGGAGGGAGAGAAGGAAGGACAGGGGGGAAGAAAAAGTGTGCCTATTATGTACAGTTTTA GTATTTTATCTCTTACTTGGCATTTGTAGTCCTCATCTTGCCGTGTT |
| mm4_intergenic_Ralb|RP23-386K20.2_chr1_119504901 |
ACATTGAGTGTGTGGGCGTGGCACCCACGGAACGGCCCCACCCATTCCCCCTTCCTTTCGGCTCCCCAGCCGGACTCGCG CACGTGACCGCTGCTGCAGTGGCAGAGCTTGGGAACTGGTCTGG |
| mm4_intergenic_Adck1|Nrxn3_chr12_88700306 |
GGACAGACTGGGTTGAAGCAAGATGGAGAGGAGGAAGAACAAGGCTAAGACACCACAGGAGAACTTGCATTTTCATCTGA GCATGGCTGTGAGTAGGG |
| mm4_intergenic_Sertm1|Ccna1_chr3_55012689 |
TCGAGGTGTGAAAACAGACATTAAAATGAGGTGAGATGGGGGAGGCAGAGCAGAAAGGACTTGGAGGTCCCCTCCCCCAC TGGTTGAAAGGAAC |
| mm4_intergenic_Gm16391|Gm17538_chr17_76972728 |
GCAAATCCAGCAGCCATGAGGTCTGCCCTGTCTTTTCTGAGCTCCATCTTCTGGTCCACACCTCTATCTGTGATCATATG TGTGCACTGCCCTCACCTGACTACAGCTCTGCTTGCC |
| mm3_intron_Reps1_chr10_18088894 |
AAGAGGCAGGCAGAGTTGTCAACTGGGGAGTAAGGTACAGATCTGCCATTGCAGGTAGACTTGTGGACTGAAAGATGGAG CTCAGAAAGGACAGGGCTGACCTGACAGCTGCTGAG |
| mm3_intergenic_Gm25740|Gm23481_chr10_46626991 |
GCAGAGGTGTGGACCAGAAAAAAGATGGAGCTCAGAAAGGACAGGGCAGACTTTAATACTGTGTGCTGAGCTTGCTGGGA GTACACCAGG |
| mm4_intron_Antxr2_chr5_97908713 | GTGATGTATAGAGCTGGGTGGGGGTGGGGAGGAGAAAGGACAGGGAGGGTAAGAACAGAACAGCAGTGCAGGA |
| mm4_intron_Cntnap3_chr13_64779285 |
AGCCCAATTTAGTAATTGTGAACATTTTTAAAGAAAGGAGTTGCAGGAGAGGAGAAAGGACAGGGACGTTTTCTGTATTA TAGCAATGTGCTTTGAGAAATATTGAATAGATTTTTTAAAGGCATGCCGTTACCTTTACC |
| mm4_intron_Nup62cl_chrX_140019469 |
TGAGAACCTACCTGGAACTAACTTCTTTAGATCCAATTTAATAGCTACCTTTGAATCCCATGACCTTTCTGATCTCCACC CCCATACAAAAACAGCACAAATTTTAACAACCAGTAACTAGTTCTTCCCA |
| mm4_intron_Grid1_chr14_35178770 |
TCACACACAACCAGGTCTTGTTATCCTGATGCATAGATGGCAAATGTTCTACTCTTGTTTTTATAGAGCTTAGGTTAGGG CATGGAGAGCCAAAAACACAGGGTTCACATATCTCCCAGGGTTCACATATCTCCC |
| mm4_intron_Ass1_chr2_31471339 |
CACTTGCTCACTGGGTCTGGGATGAAGACCTGAAAAGACAGGGTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNAGACAAGGCTTTCAGAAGGAAGA |
| mm4_intergenic_Gm25570|Gm15631_chr6_105608565 |
TCGGGGTGTTTGCCTACTTCTGAAGATGCATTCCTTGTCCTTCCAGCTTACCATCAGCATCAACCATGCCCCTGTGCCCC TGCTTTACACAGA |
| mm4_intergenic_Pax5|Gm12463_chr4_44733296 |
TGCGATGAGAGATCACTGGGTATGTGAATTCCTTAAGGGCGAGATGTCTTGAAAGAGGGAGAGGAGAAAGAACAAGGAAA AAAAAGGAGAGAAGGTAGACAGCA |
| mm4_intergenic_Cadm2|Gm24681_chr16_67994506 |
TCCCCTGCAAGTCCAATAGCCTTATAGTCTGCCCTGTCCTATCTGCACTCCAGCTTCTGATCCAATCCTCTAACCACAAT CCCAGACATCTTCAGACATCAGCAAATACAAGAAGAGACCCCCTACCCAAATTCTCTGCC |
| mm4_intergenic_Pex16|1700029I15Rik_chr2_92381772 |
GGGCCTCAACTCTTCTGTCCATACTCCCTGTCCTTTCCTCTCTTCTTCTGCCCTTCCCTTTTAGACAAGAGACTTGTGGG CTTCAAACTCAATGGCAGTCTCATTGTGGGACCATAGGGCTAAGCT |
| mm4_intron_Gm17089_chr6_134239467 |
GGCCCTTCCTTCCTGTTTCAGGGCCATGGCTGACTTGCCCTTGTCCTTTCTGACCGCCATCCCTCCTCAGCAGATGCTAG CCACAGCAAAGGAAGGCACCCGACAGTACACATAGTCCCTTGCTATCTCCCACCA |
| mm4_intergenic_RP24-86O15.2|Gm10698_chr9_33495682 |
ACAGCCTCATGACCAGCAAACTCATTGAGCCCTGTACTTTCTGCTCTGCATTTTCTTCTGTTATGAGCTGAACCATTAGT CCATGTTTCAAAACTAGACCATGTTACCGGGACCAA |
| mm4_intergenic_Gm20713|Gpc5_chr14_115973891 |
TCTCCAGGGATGGATGCAGAGCTGTGGCCTTGGAAATGGAGAGCAGAGAGGGCAGGGTGGAGTTGGAGCTTCTGGGTTTT CCTAGAGGACCCACAAAGCAAGGA |
| mm4_intergenic_Gm15985|Gm6116_chr5_74906476 |
TCCAAGCTCAGTCAAAAGGCTAGAGATGTCCTTGTCCTTACGGCTCTTCCTTCCTGTTGGGAAAGGCAACCCACTAAATA ACCGAATTCAGGTATCAATAAAGCCATAAAAAAAAAAACATGGAAAGGGCAGTGGT |
| mm4_intergenic_Hmgb1-ps9|Pik3r1_chr13_101505202 |
TTAAGGGTGGGAAAGGAAAAGAGATGTAGACAAGAAAGGACAGGGTAAGGAATGTGTGTTTCTGTAAGACAGATGGTATT GTTCACCCTACTTTTGGCTGGG |
| mm4_intron_Lmbr1_chr5_29362084 |
ACTTACCAGCTAAAGGGAATATGTAAATACACAAATACTGCAAAACCCTCCCAGTCCTTCCAGCTCTTCATCTGCCTCAT GTCCTTGAGTCTCTGGATCTCTCTAGCCTCCATGTCAGTGGTGTGTCTTAGCCGT |
| mm4_intergenic_Mettl21e|Gulp1_chr1_44425904 |
TGCTTTGCCCTTTCCTGAGTTGGAGCCTTGACCTTTCTGTGCTCCATCTGGTTTACCCAGATGCTTCCTTAAATTCCTTT TTCTTGTTCCTCACTTTCAACTGGCTGT |
| mm4_intergenic_A730045E13Rik|Gm26714_chr8_24237937 |
ATAGCCACGCGGACAATGATCTGGTAACACTGAGATTTTATGGCATCCCCCATCCTTTCGGCTCTCAACCGATGTTCCCG CTGCTACACACTA |
| mm4_intron_Mfsd9_chr1_40775932 |
TGGGAGGAAGGGTACAGGAGGGGCTGGAGAGCAGAAAGGGAAGGGCCAAGTGATATACNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNGGGAATCAATCACTATGCAGACATTCCCTCATAGGAG |
| mm4_intergenic_Abcg2|Herc3_chr6_58749375 |
AAGGCAAGCAGAGCAGTAGGTGGGGTATTGAGTTCAGATCCTAGAGATTGCACGCAGAGGTCTGGACCTTAAGATGGATC TCAGAAAGGACAAGGCAGACCTCTTAGCTGCTGGG |
| mm4_intron_Iqub_chr6_24465135 |
TTCCTGGAAGGGCAAGTTCCACCCTGTCCCCTCTGCACTCCATCCCTCAGGCCACAGCTCAGCCTATATCCTTGGAAGCC TGTTGCTACCCAGGACAACCAGGAGAGATTGCCATGC |
| mm4_intron_Sec61a2_chr2_5892671 |
ACACTTGGGCAGGAAACAGTATAACTTACAACACTATCTTTGACAGACTGAGAATCATGCCTAGNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCAGACCCACAGGGAAAGAGA |
| mm4_intergenic_4930564G21Rik|Grip1_chr10_119806449 |
GCCCCGCTGAGAGATTGATAATGGAACACCAAAGGAGGGGGGTGGGGAGCGGGAAGGACAGGGTGTAAATTTACTCCAGA GCTGTCCTGTGCTGTGGATT |
| mm4_intron_Sept11_chr5_93156203 |
CTTCTGCCTTGTCTGCTCCACTTCGAAGGCTAAGCATCCGTTTGTTAGAGGCATTCTAAAGAAAGGTGTGGGTTGTAGCT TTCTGTTGGAGAGTTGAAAGGAAAAGGAGAAAACTAGGAGCTGAACAAATGCATCCA |
| mm4_intergenic_Gm26260|4930564G21Rik_chr10_119572375 |
CCTGGGCATATTGGGCGTATGCTGGTAGTACAGATCTTCAAATGTACTATAACAAAAGTCTTGGATGGAGAGCCTAAGGG TCTGGGCCTATCTCAGCTCTCCAGCTGTTTCTGGTGCTAGCC |
| mm4_intergenic_Ccne1|Gm22203_chr7_38146998 |
GGTCTGTGAGTGTGACCTCCTGTTAATCCATCTATCACAAGACCCTGTCCTGTCTGCTATCCAGCCTTCTTCCTGCCCCT GACCCCAGTAAGGAAAAGCTCCAATAAGGTCCCCCCTTGGGTTCCTTGGTGGTGA |
| mm4_intron_Gse1_chr8_120452341 |
TGTGGAGCAAGGCTTTCAGGCTGATGGTGGCACACAGGCCCAGTCAGTGCCATGACCTTCCAGCTCACCATCCTCAGATC AGACCAAACTAGATGGAACCCAACTGAGATCCATATAGCCCCCAAAGGCCTCCTGTATG |
| mm4_intron_Dcaf5_chr12_80406400 |
AGATAAGCTACATGGGCAGCAATTAACAGTAGCCCTGAGCTTCTGGCTCTCCATCTACCCAAGGTTAAAAATATAAGGAC TGGAATGGCCAAGCTAGTGGT |
| mm4_intron_Zbtb20_chr16_43274013 |
TCTCTGTTGATGGGCTAGAGCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCAAGCAAAC AAACAAAAGAAGTTAGGTTTTTTTATGCATATCCTCCCCAAATTTTCCTGAACG |
| mm4_intergenic_Gm6893|Gm15270_chr10_24571459 |
TGAGTCTGGCTGCAGTACCTATGAACATGGAAGGCCAGCTATGTAGTGACACAAAAAAACTATGTGACTTGTTGAGATGA AGAGCAGAAAGGAACAGGATAATGACATGAGACAGGACTGAGACGTAACCTTCGTGTCGC |
| mm4_intergenic_Igsf3|Atp1a1_chr3_101547670 |
CAGAACCTGTGCTGAGGAGGACATGAGTGATTGGATTGTCCAAAGGATGGTCACTGAAGTCAGAAAGGATGGAGGGCACA CAGGACAAGGCTTAATAACCACAGTGCTGACACCTGCTCTCAGAGGGCCTGGATCT |
| mm4_intron_St18_chr1_6852671 |
CCCATTTCACTCCTACCTGCATCCATGTACTTTCTGTTCTCCCTCTGGAATGCTCATCTTGTTCATGTCATTTGCCCATT TCTCCATTGCCT |
| mm4_intron_Adam12_chr7_133967202 |
GAGCCACTCACCAGATGCTTTGGGACAGTTGTACCTCCCCTGTCCTTTCACATCTCCATTGCACTTTCTACTCTAATGCT TTCCATTCTTTTGCTTTCTCTCAGCAGACAGATGTTCCCCA |
| mm4_intron_Pola2_chr19_5952219 |
CTCAGGCTCTTGCATCTTCCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNACCACACAGGATATCATATTGTCACTTCCAGAGGAAGTCATTCATAGCC |
| mm4_intergenic_Sgcd|Gm23039_chr11_47823394 |
AACAGAAAATGTGCAAAGGCTATTATCATCATGTTTATCCATGTCCTCTCCGCTGTCCATGTGTTATACATGAAGGACTC ATCCCTTTATACATATCACATCATTTAATCACCCCAAGCTTAGGCGCTACTT |
| mm3_exon_Ctif_chr18_75435106 |
TGCTCAGTTCTCTTTCCCGCCAGGGCCACCCCTGTCCTTGCGCCTGTCCATCTGGCCCTGTGCACTAGGGCCCCAGCTGC CCACGGGCTGCCTGCCAGGCCCCCTCGGCTGGGCTGTCAGGCTGTCAGTTT |
| mm4_intergenic_Guca2b|Hivep3_chr4_119704294 |
AGCTTCCTGGGCTGATGTTCAGAGGGTCCAGTGGTGTTTGGAAAGCTGAACAGATACATGGTGCTCCATCTCCTTTCTGC CCTCCAGCGCCCAAGCTTCTGCTCTGGTATGGTTTACCCATGTCATGATGCAGCTGC |
| mm4_intron_Gbp2_chr3_142631322 |
AGAGAGTGCCCCACTGAAGAAGTGTGGAAGGATGGTGTCCTGAAAGGACAGGGATATGATTTAAGGACATCACCATGGAT TCAAAGCTCTATGGAGACTTTGCCAGGCAGGGATGTA |
| mm4_intergenic_Gm8244|Gm6754_chrX_62997108 |
CCCAGGAGCCATGTTGTCTGCCATGTCCTTTCAGAGGTCCATCTTCCTTCTGGCCCACACCATGCCTGCAGCCTTGGATC AGCACCCCAAATTCCCCAGGCCACAGATCTA |
| mm4_intergenic_Gm14624|Gm22103_chrX_56031244 | AGGTTGTAGGCATGGTGTGGGCCAGAAGGAAGATGGACCTCTGAAAGGACATGGCAGACAACATGGCTCCTGGG |
| mm4_intergenic_Mex3b|Gm22934_chr7_82893587 | TGTGTTTGGGAAGCCTACCACCATGGTCCTTCGCCTCTCCATCTTTCCTCTTCTGCTGTATGGAAAGA |
| mm4_intron_Necab2_chr8_119454632 |
AAGAGCGGAGATAAGCCACGTACTTAGAGGAGCACCTTGGTGGCGAGCCCTGTCCTGTAGGCTGTGCATCAGAGTGTGAG GGCCTTTCCCAGGGTCAAGGGTGGTCCTGGAGTGGAAGTCT |
| mm4_intergenic_Gm6457|Ss18_chr18_14600331 |
AAGATGCCACCAGAGACACCGAGAGACTTCGAAGGCCAGATGGGGATCCCCAAGGACAAGGAGCAGAGTCTCTGTGCCCA TTTGAGGTGACAGTGACTGACTGAGCACAGAAGGTTGCATGC |
| mm4_intergenic_2510009E07Rik|Ehhadh_chr16_21718673 |
ACAGTCCATCCCTCTACCCATCCTTACCCCTAGACTGGGTCCTGTCCTTTCGTCTCTTTATTTGGGTTCCACCTACAGCT TCACCAGCAAACCTATGACCCAAAGTTGCCTGGTCTACACCACCAACTTCTCCCCTTGCA |
| mm4_intron_9130019P16Rik_chr6_54397583 |
GGCTCAAGGCTGATCCAAGTATCATGAGTCACCATCTCCTTCCGAATCTCCATCTTCCTCATCCCACATTCTTTCCACTC CTTCATCCACCTGGAGTTGCC |
| mm4_intergenic_Gm17131|Tmem132d_chr5_127952178 |
TCTCAAAACAGACCCTGGGGCAGGGATCAGAGGCCATATACTTATCAATGTGTGAAGAGTGTCAGCCATAGAGTTAGGAG GGAGAGAAGAAAGGAGATGGAGCCTGTAGGGAACTAACACACAGAGAGGATGCTGGG |
| mm4_intergenic_mmu-mir-21c|Nrp1/Mir1903_chr8_128332167 |
AGTGTAGACAAAATGGTCCCTGAATGATGGATAGCTGAAAGGTTAAGGATAAGACCAGAGAAGCAACTTCACCTGTGGCA CGCAGGAGGGTATAGGGATCTGGACAAAAGCAATGTCACAGGTGTGGTAGCAGCTGAA |
| mm4_intron_Mpp7_chr18_7387587 |
AGGAAGGGAGGGCTGAGATTTCTGTGTGTATGTGCAGAGACAAAGCCCAATACCAGGAGAAGCTCTCCATGGAGAGAGGA AAGTACATGGGCAAGCTGAAGGTGTCTCTGAAACCACGAGGGCTATGGATTCC |
| mm4_intron_Itm2b_chr14_73380301 |
TGGTTTGGGAACGATGTCCTTAGGGTCACTTCTGCAATGTAACCCCAAACCCTGAACTTTCAGCTCTCTATCCCATAAAA GACTAGCACTGTGAAACTCCATGCAGATAGAGTAAGGGCCTGGGCTACCTAG |
| mm4_intergenic_Gm14558|Slc6a14_chrX_21706206 |
AGTGGAGGACTTTTGAAAAGACAATATCGTGCAGAATACCTTACCCCTTGTACTTTAGGCTCTCCCTGTGATAAAGGGAG GCACTGACCACTTTGCT |
| mm4_intergenic_2810407A14Rik|Grik1_chr16_87878938 |
GAGGCTTAGAACTGCTTTGGCATGTAAGTAGCTGTGTTTGTCAGTGATGAGGAGAGGTTTGTTGTTGGAGAGACGAATGC ACAGGGAAACATTTCATAGACTGACAATTTCCTCAACTCCTTTCCTCTTTCT |
| mm4_exon_Serpine3_chr14_62672994 |
CCCAGATAGCCCGTTGTGGGGCCGGGCCGATGCCCTGTCTACTCAGCTCTCCATCATGAGCACCATGACTTTCCAAAGTA CCTGGCAGAAGAGATTCTCTGTGGTCCTGCAGC |
| mm4_intron_Rhobtb1_chr10_69259292 |
TCCTTGTACTTTCCCTTCCTGACCCCTGGCCCTTGGGCACTCCATCACCTGTTTAATCAGATAACTATCCTAACAATGAG ATTAGCTCATTCAACTAGAAAGTATACTCCACCAACTCCGCAAAA |
| mm3_intergenic_Gm20594|Gm4409_chr6_79895208 |
GTTGGTGAGACGGGTGAAGATTCAAATGTGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNGTGTGTATGAAAGCATATGAACATGGTGCAGGTGTGCACTCATACAC |
| mm4_exon_Arrb1_chr7_99601475 |
ATGCTCATTCCCAGGAAGGCCACACTGCCTGGCCTTGGGATTTGGCTTGAGATGGGGAGCAGAAAGGGGAGGGTGGGGCC TGAAGGCACAATGATGATGGGTGTGAAGATGTGGAGGG |
| mm4_intron_Nkd1_chr8_88528762 |
GCATCCCGTGACATCAGCTAAAGGGCCTTTCCCTCCCCTGAACTTTGGCCTCTCCATCTGAGAAGTGGGATGATGTCACT CTAATTTAGTATGTGTAGGACGGCAGAGGGGGAATGTCAGAGTGGTTGCAGGTT |
| mm4_intergenic_Gm22976|Ppargc1a_chr5_51439124 |
TGCAGAAAAGTGTGACGGAGATTGTGAAACTCCTGATGTAGAACTGAAAGGAAAGGGGTACTAAATAAATGGTGGCTGTT GTCATTAAGTG |
| mm4_intron_Atp8a2_chr14_59814506 | AGGACTGAGGAGAGGGATGCGAGGAAGGAGAGCTGAGAGCACACGGGTGTGGAAGCTAGCTATGAAGGGC |
| mm4_intergenic_Gm13317|Plxdc2_chr2_16314332 |
ACATGAACAAGTTCCAAGATACAGAAAAATATATCAGATTTTAAGAAGATGAGTAAGTTGTTGTCATTGATGGATAGAGG AAAGGCCAAGGTGGTAGTAGGAGGTGCGTTGG |
| mm4_intergenic_Gm12947|4930471C06Rik_chr4_127431150 |
TCACCTAGGAAGTGGCAGAGAGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNATCCTTTGTGTGTGATTCTCTTTCACCTTCCTTACT |
| mm4_intergenic_Gm10247|Grin2a_chr16_9128743 |
CAGTTGCTCCTCCCTTGACCCCATGCCCATTCAGCTCTGCATCTCCTCCAGGACTCCCACAAGTGCCATTTGAGTCTGGT GAGTTCTGTTGTGGGG |
| mm4_intergenic_Gm23454|Arx_chrX_93281727 |
AAACTGTATGCGGACCCCTCCAGCCTGGATGCACACCCGGGGTCCTGAGGTCCGGTTGGTGATGGAGAGAAGAAAGCAGA TGGCGGCGATTAAGGGGCTGAGAAGTTTCCCTC |
| mm4_intergenic_Snx29|Cpped1_chr16_11776866 |
AGGGGCAGCAAATGAAAGGAATANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNATGGAATAAGAGGAGGGAAGGGGACATG |
| mm4_intron_Klhdc1_chr12_69251627 |
CCCACACATGTGCAAATGGTTTAAAAGGAAGATAACAGGGGTACATCCTAAGCTTGTAGTTACTAGGCTTAAAATACAGA TGGAGAACCGAGCGGCCATGGTCTTCCTCCATGTTCCCCCACCCCACCTCAATTAG |
| mm3_intergenic_Tab2|Ust_chr10_8059285 |
TTCAGTGGATGGGGCTTTGGCCACAGCGGTAGCTGAAGCTGTTTCCATAGGTAGAAGTCAGGCAGTAGTGGGTCGAGAGC CCAAAGGACAGGAATTGGAAAGCACACACCTAAACAC |
| mm4_intron_Ncam1_chr9_49792418 |
TAACCTGCATGGCCAACAGAACCATATCCGTCCTTGTACTGATGGCTCTCCATCTTACCATCAAGTCACTTTTTCCTCTT AAAGCCTCCCAACATAGCAATGTTGGGACACTTAGCAACCA |
| mm4_intergenic_Gm26070|Slit3_chr11_35231461 |
TTAACCTGCCTTGCCTCCTGCTGACCTTATCTCTGCTGGCCTCACCCAGGTCCATTCGGCTCTACATTCAGCCCACTGTT CATTCTAACTCGAACAGTGGCTAGAGATGGCCACCTCCAGTGCCAGAGTCACATCA |
| mm4_intergenic_Rnf138|Mep1b_chr18_21054753 |
TCTGAGCTTTCCCTTCTCCACTTTTCTACATTCTTCCCAGGCCTTCTCTTTTCCCCTCTCCATCATACAGTTCTAGTAAT ATCTATCTACCAACAGTCCTCCAACCAGGCCCCACTTGTTA |
| mm4_intron_Camta1_chr4_151519360 |
GGGCTGGAGAAGTGTCTGTGTGAACCAGATGGAGGGCTGACAGCACAAGGTTCCAGAAGGACCCAGGTATCTTGGAGAGT GGGGGGACCTCAGTAACCAAAATGGCTCACGGTGGAG |
| mm4_exon_Fhod1_chr8_105329333 |
TGTTCACAATACTGGTTTCTGGGTATAAGCTTCTGAAACCAGGTTTCTGTTCCAGGCCCTTTCCGCACTCCATCTCTTGT GCATGTCGCTGTCATGTCCAGGCGTGGTAGCACCTCACACCTC |
| mm4_exon_Hnrnpm_chr17_33646611 |
AGCCACCTCTGGAGACTCAAACTTAACCACACCGCACCCCTTGGACTTTCCGTTCTCCATCTTGATGTCGGCGTACAGCA CGTGGCCTGGCACAGGGAGGGAAGAAGAGACCACACGCA |
| mm4_exon_Map2k2_chr10_81121052 |
AGGACCGGCTCTCTCAAGATTTGTGTCCCTCACAGTTATGTGTTCTTTGTACTGTCAAGTAGGTCATGGGATGGACAGCC GACCGGCCATGGCCATCTTTGAGCTGCTGGAC |
| mm3_exon_Nrp2_chr1_62785024 |
CACACCGGATGAACCAGGAAGATTAGCTAATCTTGGCTCTTGTCCTTCCGGCTCTAGATCGTGTTCGAGGGAGTGATAGG GAAGGGACGATCGGGAGAGAT |
| mm4_intergenic_Grik1|Cldn17_chr16_88488638 |
ACCAAAACATATGGGGCCGTTTATCTGAGCCAAGTGAACAGGAAAGGAGAGACATGAGATGGAGAGCTGAATGAAGAAGG AAGGAGACCATGACTGACAGCCAGAGGCTTCCAGGTGAGGGCAGAGCAGAGGAAGTA |
| mm4_intron_1500016L03Rik_chr11_84530629 |
AGCCGGAGAGGTTTAGCATGGGTGCCAAACTGCTTGAGAAGGATGGAGAGACGACAGTAGAAGGGATGAGGCTAGACCAA AGACGAGGG |
| mm4_intergenic_Ovol2|Ovol2/1700108N11Rik_chr2_144318605 |
GAGTAGGGGAGGACGGAGAGGATTTCTCTCCCCCTGAACCTAGGCAGGCTCGTGAATAATGGAGAGCAGAAATGACGTGG TAATTCTGGGATATGGGTCACCTGGT |
| mm4_intergenic_Gfra2|Gm9192_chr14_71277184 |
CTTGTGGGCTCTGTCAGGTTATTGCTTTTACATTTTTCTTCTGTCCCCCTCCTTCCATGTCCCTGTCATATCTGCACTCC ATCCACTAAGATCTAACTGCAGGGTAACTGGGGAGTCAGT |