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Contents:In the table below, Illumina Nextera Handle sequences have been added and highlighted in bold. Primers for the on-target have been added for convenience. The table below is sorted by the CFD off-target score. Sites with very low CFD scores < 0.02 are unlikely to be cleaved, see our study Haeussler et al. 2016, Figure 2.
In the protocol by Matthew Canver, Harvard, two PCRs are run: one PCR to amplify the potential off-target, then a second PCR to extend the handles with Illumina barcodes. Please click here to download the protocol. Alternatively, you can have a look at Fu et al, 2014.
If a primer was not found, the reason is usually that the region around the off-target is too repetitive. To avoid unspecific primers, all repeats are masked for the primer design (not for off-target search). If you think that we should change the parameters here or should use different primer3 settings, please let us know.
| Name | Primer Sequence | Tm | CFD Score |
|---|---|---|---|
| ontarget_mm0_exon_5730457N03Rik/Evx1_chr6_52313852_F | Primer3: not found at this Tm | N.d. | 1.00 |
| ontarget_mm0_exon_5730457N03Rik/Evx1_chr6_52313852_R | Primer3: not found at this Tm | N.d. | 1.00 |
| mm2_intergenic_Gm12726|Gm12728_chr4_105618332_F | Primer3: not found at this Tm | N.d. | 0.62 |
| mm2_intergenic_Gm12726|Gm12728_chr4_105618332_R | Primer3: not found at this Tm | N.d. | 0.62 |
| mm4_intergenic_Wnt5b|Erc1_chr6_119569581_F | Primer3: not found at this Tm | N.d. | 0.36 |
| mm4_intergenic_Wnt5b|Erc1_chr6_119569581_R | Primer3: not found at this Tm | N.d. | 0.36 |
| mm4_intergenic_Gm23447|Gm23773_chr17_60668315_F | Primer3: not found at this Tm | N.d. | 0.33 |
| mm4_intergenic_Gm23447|Gm23773_chr17_60668315_R | Primer3: not found at this Tm | N.d. | 0.33 |
| mm4_intergenic_Gm22673|Gm23059_chr12_60661446_F | Primer3: not found at this Tm | N.d. | 0.32 |
| mm4_intergenic_Gm22673|Gm23059_chr12_60661446_R | Primer3: not found at this Tm | N.d. | 0.32 |
| mm3_intergenic_Gm11850|Gm11849_chr4_17063912_F | Primer3: not found at this Tm | N.d. | 0.32 |
| mm3_intergenic_Gm11850|Gm11849_chr4_17063912_R | Primer3: not found at this Tm | N.d. | 0.32 |
| mm4_intergenic_Gm10076|Gm22406_chr14_105719112_F | TCGTCGGCAGCGTCACACTCGATATTGTTGGGCA | 57.2 | 0.31 |
| mm4_intergenic_Gm10076|Gm22406_chr14_105719112_R | GTCTCGTGGGCTCGGAGAGAGCAGTGTTAGTGAAACA | 57.3 | 0.31 |
| mm4_intergenic_Hs6st2|Gm14581_chrX_51603450_F | TCGTCGGCAGCGTCCTCTGGACAATGTGAGCATGA | 58.0 | 0.30 |
| mm4_intergenic_Hs6st2|Gm14581_chrX_51603450_R | GTCTCGTGGGCTCGGTCACCCATACGTTCATGATAGTCT | 59.1 | 0.30 |
| mm3_intergenic_Gm13810|B230118H07Rik_chr2_101038452_F | Primer3: not found at this Tm | N.d. | 0.29 |
| mm3_intergenic_Gm13810|B230118H07Rik_chr2_101038452_R | Primer3: not found at this Tm | N.d. | 0.29 |
| mm4_intron_Rsu1_chr2_13125918_F | TCGTCGGCAGCGTCCAACCCATGTTTCCTCTTCTGA | 58.2 | 0.28 |
| mm4_intron_Rsu1_chr2_13125918_R | GTCTCGTGGGCTCGGCCTGGCAAACACATTCCACA | 58.9 | 0.28 |
| mm4_intergenic_Gm23022|Rab28_chr5_41280730_F | Primer3: not found at this Tm | N.d. | 0.26 |
| mm4_intergenic_Gm23022|Rab28_chr5_41280730_R | Primer3: not found at this Tm | N.d. | 0.26 |
| mm4_intergenic_Fbxo30|Gm25979_chr10_11319392_F | Primer3: not found at this Tm | N.d. | 0.25 |
| mm4_intergenic_Fbxo30|Gm25979_chr10_11319392_R | Primer3: not found at this Tm | N.d. | 0.25 |
| mm4_intergenic_Gm7336|Fancf/Gas2_chr7_51829943_F | Primer3: not found at this Tm | N.d. | 0.25 |
| mm4_intergenic_Gm7336|Fancf/Gas2_chr7_51829943_R | Primer3: not found at this Tm | N.d. | 0.25 |
| mm4_intergenic_March3|C330018D20Rik_chr18_56941664_F | Primer3: not found at this Tm | N.d. | 0.25 |
| mm4_intergenic_March3|C330018D20Rik_chr18_56941664_R | Primer3: not found at this Tm | N.d. | 0.25 |
| mm2_intergenic_Alcam|Gm25723_chr16_52596596_F | Primer3: not found at this Tm | N.d. | 0.24 |
| mm2_intergenic_Alcam|Gm25723_chr16_52596596_R | Primer3: not found at this Tm | N.d. | 0.24 |
| mm4_intergenic_Olfr805|Gm24485_chr10_129727170_F | Primer3: not found at this Tm | N.d. | 0.24 |
| mm4_intergenic_Olfr805|Gm24485_chr10_129727170_R | Primer3: not found at this Tm | N.d. | 0.24 |
| mm4_intergenic_AI314831|WT1-AS_8_chr2_105117073_F | Primer3: not found at this Tm | N.d. | 0.23 |
| mm4_intergenic_AI314831|WT1-AS_8_chr2_105117073_R | Primer3: not found at this Tm | N.d. | 0.23 |
| mm4_intergenic_Neurod6|Ccdc129_chr6_55728417_F | Primer3: not found at this Tm | N.d. | 0.23 |
| mm4_intergenic_Neurod6|Ccdc129_chr6_55728417_R | Primer3: not found at this Tm | N.d. | 0.23 |
| mm4_intron_Cdk14_chr5_5260111_F | TCGTCGGCAGCGTCCGCAAAGTGGCTCTCAATGC | 60.4 | 0.22 |
| mm4_intron_Cdk14_chr5_5260111_R | GTCTCGTGGGCTCGGAGTTGTGTTTAAACCTGTACATTCT | 57.1 | 0.22 |
| mm3_intergenic_Gm22451|Sis_chr3_72745729_F | TCGTCGGCAGCGTCATTTCCTCCTTCAGGTGACTATTAT | 57.3 | 0.22 |
| mm3_intergenic_Gm22451|Sis_chr3_72745729_R | GTCTCGTGGGCTCGGACATCCAATTATGCCAAATGGACA | 59.2 | 0.22 |
| mm4_intron_Unc80_chr1_66480556_F | TCGTCGGCAGCGTCACTTCTCCTTGTGATACCTATGTG | 57.7 | 0.21 |
| mm4_intron_Unc80_chr1_66480556_R | GTCTCGTGGGCTCGGGCAGGCAAGTTGCTGACTTT | 59.6 | 0.21 |
| mm4_intron_Lama2_chr10_27183958_F | Primer3: not found at this Tm | N.d. | 0.21 |
| mm4_intron_Lama2_chr10_27183958_R | Primer3: not found at this Tm | N.d. | 0.21 |
| mm3_intergenic_Gm15501|Gm5899_chr7_93587864_F | TCGTCGGCAGCGTCACTACACCATATCCTATTCCCCT | 57.6 | 0.21 |
| mm3_intergenic_Gm15501|Gm5899_chr7_93587864_R | GTCTCGTGGGCTCGGTGTTTTCTTCCTCTGTGAAGGCT | 60.1 | 0.21 |
| mm4_intergenic_Gm23036|Gm22034_chr1_102709211_F | Primer3: not found at this Tm | N.d. | 0.20 |
| mm4_intergenic_Gm23036|Gm22034_chr1_102709211_R | Primer3: not found at this Tm | N.d. | 0.20 |
| mm4_intergenic_Tnfrsf23|Osbpl5_chr7_143687907_F | Primer3: not found at this Tm | N.d. | 0.20 |
| mm4_intergenic_Tnfrsf23|Osbpl5_chr7_143687907_R | Primer3: not found at this Tm | N.d. | 0.20 |
| mm4_intergenic_Vmn1r11|Vmn1r12_chr6_57151925_F | Primer3: not found at this Tm | N.d. | 0.20 |
| mm4_intergenic_Vmn1r11|Vmn1r12_chr6_57151925_R | Primer3: not found at this Tm | N.d. | 0.20 |
| mm4_intergenic_Cox5a|Gm26631/Cox5a_chr9_57531099_F | Primer3: not found at this Tm | N.d. | 0.20 |
| mm4_intergenic_Cox5a|Gm26631/Cox5a_chr9_57531099_R | Primer3: not found at this Tm | N.d. | 0.20 |
| mm3_exon_Gm5431_chr11_48894615_F | TCGTCGGCAGCGTCCCAGTGATGCCTCATCCAGG | 60.1 | 0.20 |
| mm3_exon_Gm5431_chr11_48894615_R | GTCTCGTGGGCTCGGCTACCATACCATCCCGGGGA | 60.1 | 0.20 |
| mm3_exon_Gm12187_chr11_49070168_F | TCGTCGGCAGCGTCCTCATCCAGGCCAAAGGAGG | 60.1 | 0.20 |
| mm3_exon_Gm12187_chr11_49070168_R | GTCTCGTGGGCTCGGTGGGCTACCATACCATCCCT | 59.7 | 0.20 |
| mm3_exon_Gm12185_chr11_48915458_F | Primer3: not found at this Tm | N.d. | 0.20 |
| mm3_exon_Gm12185_chr11_48915458_R | Primer3: not found at this Tm | N.d. | 0.20 |
| mm3_exon_9930111J21Rik2_chr11_49038864_F | Primer3: not found at this Tm | N.d. | 0.20 |
| mm3_exon_9930111J21Rik2_chr11_49038864_R | Primer3: not found at this Tm | N.d. | 0.20 |
| mm3_exon_9930111J21Rik1_chr11_48967021_F | Primer3: not found at this Tm | N.d. | 0.20 |
| mm3_exon_9930111J21Rik1_chr11_48967021_R | Primer3: not found at this Tm | N.d. | 0.20 |
| mm4_intergenic_Ythdf3|Gm26485_chr3_16812069_F | Primer3: not found at this Tm | N.d. | 0.19 |
| mm4_intergenic_Ythdf3|Gm26485_chr3_16812069_R | Primer3: not found at this Tm | N.d. | 0.19 |
| mm4_intergenic_Gm5652|Gm23752_chr12_5670296_F | TCGTCGGCAGCGTCGCCATCCACTGCATACCTGT | 60.1 | 0.19 |
| mm4_intergenic_Gm5652|Gm23752_chr12_5670296_R | GTCTCGTGGGCTCGGGCAGTGACACACAAGTATTAAGCT | 59.5 | 0.19 |
| mm4_intron_Nisch_chr14_31193017_F | TCGTCGGCAGCGTCGCTGGAGGTGGAAGAAAAGC | 59.1 | 0.19 |
| mm4_intron_Nisch_chr14_31193017_R | GTCTCGTGGGCTCGGTTGTGCAGACCATTCCGACA | 59.8 | 0.19 |
| mm3_intergenic_Grik3|Ftl2/Mir692-2a_chr4_125497358_F | TCGTCGGCAGCGTCACAGTGTGAGGCCTCAAAGC | 60.5 | 0.19 |
| mm3_intergenic_Grik3|Ftl2/Mir692-2a_chr4_125497358_R | GTCTCGTGGGCTCGGGAAAACACCAGCAGGAGGGA | 59.8 | 0.19 |
| mm4_intergenic_Gm25850|Gm23646_chr8_107689137_F | Primer3: not found at this Tm | N.d. | 0.17 |
| mm4_intergenic_Gm25850|Gm23646_chr8_107689137_R | Primer3: not found at this Tm | N.d. | 0.17 |
| mm4_intergenic_Gm26685|Dpt_chr1_164648246_F | Primer3: not found at this Tm | N.d. | 0.17 |
| mm4_intergenic_Gm26685|Dpt_chr1_164648246_R | Primer3: not found at this Tm | N.d. | 0.17 |
| mm4_intergenic_Gm16294|Zfpm2_chr15_40551357_F | TCGTCGGCAGCGTCACAGCCAGAGCATAGCCTTC | 59.8 | 0.16 |
| mm4_intergenic_Gm16294|Zfpm2_chr15_40551357_R | GTCTCGTGGGCTCGGGCATACGCTTTGCCTGGTTT | 59.7 | 0.16 |
| mm4_intergenic_Olfr827|Neurod4_chr10_130242555_F | Primer3: not found at this Tm | N.d. | 0.16 |
| mm4_intergenic_Olfr827|Neurod4_chr10_130242555_R | Primer3: not found at this Tm | N.d. | 0.16 |
| mm4_intergenic_Ftmt|Srfbp1_chr18_52353515_F | TCGTCGGCAGCGTCGAGGCTTCTGTCTGTCTGCA | 59.6 | 0.15 |
| mm4_intergenic_Ftmt|Srfbp1_chr18_52353515_R | GTCTCGTGGGCTCGGTGACAATCCTGCCACCAAAA | 57.9 | 0.15 |
| mm4_exon_Olfr1287_chr2_111449403_F | Primer3: not found at this Tm | N.d. | 0.15 |
| mm4_exon_Olfr1287_chr2_111449403_R | Primer3: not found at this Tm | N.d. | 0.15 |
| mm4_exon_Olfr1283_chr2_111368895_F | Primer3: not found at this Tm | N.d. | 0.15 |
| mm4_exon_Olfr1283_chr2_111368895_R | Primer3: not found at this Tm | N.d. | 0.15 |
| mm4_exon_Olfr1280_chr2_111315742_F | TCGTCGGCAGCGTCCCTTTCCTCAGTTACCACCCC | 59.9 | 0.15 |
| mm4_exon_Olfr1280_chr2_111315742_R | GTCTCGTGGGCTCGGCAGAGGATCTGGCTCATGCA | 59.5 | 0.15 |
| mm3_intron_Kcnh7_chr2_62781340_F | TCGTCGGCAGCGTCGTGTTCAGATAAGTTATGGCAATCA | 57.6 | 0.15 |
| mm3_intron_Kcnh7_chr2_62781340_R | GTCTCGTGGGCTCGGTGGGACGTAGGATAGGTTGGT | 59.9 | 0.15 |
| mm4_intergenic_Ak8|Mir3088_chr2_28726797_F | Primer3: not found at this Tm | N.d. | 0.15 |
| mm4_intergenic_Ak8|Mir3088_chr2_28726797_R | Primer3: not found at this Tm | N.d. | 0.15 |
| mm3_intron_Sorcs3_chr19_48627012_F | TCGTCGGCAGCGTCGCAGACCCACCTTCTCCATC | 60.1 | 0.15 |
| mm3_intron_Sorcs3_chr19_48627012_R | GTCTCGTGGGCTCGGTGCCCTCTTTCAAACTGCAA | 58.2 | 0.15 |
| mm4_intergenic_Gm13483|Gm13488_chr2_50467292_F | Primer3: not found at this Tm | N.d. | 0.14 |
| mm4_intergenic_Gm13483|Gm13488_chr2_50467292_R | Primer3: not found at this Tm | N.d. | 0.14 |
| mm4_intergenic_Gm6605|Gm25286_chr7_38593577_F | Primer3: not found at this Tm | N.d. | 0.14 |
| mm4_intergenic_Gm6605|Gm25286_chr7_38593577_R | Primer3: not found at this Tm | N.d. | 0.14 |
| mm4_intron_Glrx2_chr1_143745665_F | Primer3: not found at this Tm | N.d. | 0.14 |
| mm4_intron_Glrx2_chr1_143745665_R | Primer3: not found at this Tm | N.d. | 0.14 |
| mm4_intron_Stk32a_chr18_43269276_F | Primer3: not found at this Tm | N.d. | 0.14 |
| mm4_intron_Stk32a_chr18_43269276_R | Primer3: not found at this Tm | N.d. | 0.14 |
| mm4_intergenic_B930036N10Rik/Gm24871/Alyref2|Gm9765_chr1_171506759_F | Primer3: not found at this Tm | N.d. | 0.14 |
| mm4_intergenic_B930036N10Rik/Gm24871/Alyref2|Gm9765_chr1_171506759_R | Primer3: not found at this Tm | N.d. | 0.14 |
| mm4_intergenic_Gm23481|Gm25650_chr10_46715542_F | Primer3: not found at this Tm | N.d. | 0.14 |
| mm4_intergenic_Gm23481|Gm25650_chr10_46715542_R | Primer3: not found at this Tm | N.d. | 0.14 |
| mm4_intergenic_RP24-399L6.2|9230113P08Rik_chr9_35864707_F | TCGTCGGCAGCGTCAGTGTCAGGAGCCAACAAGT | 59.1 | 0.14 |
| mm4_intergenic_RP24-399L6.2|9230113P08Rik_chr9_35864707_R | GTCTCGTGGGCTCGGTCCAAGATCCCACCTCTTCCT | 59.9 | 0.14 |
| mm4_intergenic_Ftl2/Mir692-2a|Grik3_chr4_125543580_F | Primer3: not found at this Tm | N.d. | 0.14 |
| mm4_intergenic_Ftl2/Mir692-2a|Grik3_chr4_125543580_R | Primer3: not found at this Tm | N.d. | 0.14 |
| mm3_intron_Insc_chr7_114809900_F | TCGTCGGCAGCGTCATTGACTGTCTAGGCAGGGC | 59.4 | 0.14 |
| mm3_intron_Insc_chr7_114809900_R | GTCTCGTGGGCTCGGTAGCCACCCCTCTGATTCCT | 59.6 | 0.14 |
| mm4_intron_Ogdh_chr11_6339419_F | Primer3: not found at this Tm | N.d. | 0.14 |
| mm4_intron_Ogdh_chr11_6339419_R | Primer3: not found at this Tm | N.d. | 0.14 |
| mm4_intergenic_Gm22603|Gria1_chr11_56558042_F | Primer3: not found at this Tm | N.d. | 0.13 |
| mm4_intergenic_Gm22603|Gria1_chr11_56558042_R | Primer3: not found at this Tm | N.d. | 0.13 |
| mm4_intergenic_n-R5s61|Gm15571_chr12_68848052_F | Primer3: not found at this Tm | N.d. | 0.13 |
| mm4_intergenic_n-R5s61|Gm15571_chr12_68848052_R | Primer3: not found at this Tm | N.d. | 0.13 |
| mm4_exon_Sis_chr3_72941081_F | TCGTCGGCAGCGTCAAATCCACAGATGTCCGCCC | 60.3 | 0.12 |
| mm4_exon_Sis_chr3_72941081_R | GTCTCGTGGGCTCGGAGTGCAAGTAGACCATGAGCA | 59.3 | 0.12 |
| mm4_intergenic_Tas2r134|Gm13490_chr2_51650740_F | Primer3: not found at this Tm | N.d. | 0.12 |
| mm4_intergenic_Tas2r134|Gm13490_chr2_51650740_R | Primer3: not found at this Tm | N.d. | 0.12 |
| mm4_intron_Ythdf2_chr4_132210400_F | Primer3: not found at this Tm | N.d. | 0.12 |
| mm4_intron_Ythdf2_chr4_132210400_R | Primer3: not found at this Tm | N.d. | 0.12 |
| mm4_intergenic_Gm14981|Gm26406_chrX_132196511_F | Primer3: not found at this Tm | N.d. | 0.11 |
| mm4_intergenic_Gm14981|Gm26406_chrX_132196511_R | Primer3: not found at this Tm | N.d. | 0.11 |
| mm4_exon_Matn4_chr2_164389780_F | Primer3: not found at this Tm | N.d. | 0.11 |
| mm4_exon_Matn4_chr2_164389780_R | Primer3: not found at this Tm | N.d. | 0.11 |
| mm4_intergenic_Mob3b|3110043O21Rik_chr4_35187570_F | Primer3: not found at this Tm | N.d. | 0.11 |
| mm4_intergenic_Mob3b|3110043O21Rik_chr4_35187570_R | Primer3: not found at this Tm | N.d. | 0.11 |
| mm4_exon_Ccdc37_chr6_90403743_F | Primer3: not found at this Tm | N.d. | 0.11 |
| mm4_exon_Ccdc37_chr6_90403743_R | Primer3: not found at this Tm | N.d. | 0.11 |
| mm4_intergenic_Gm22566|Akap7_chr10_25091863_F | Primer3: not found at this Tm | N.d. | 0.10 |
| mm4_intergenic_Gm22566|Akap7_chr10_25091863_R | Primer3: not found at this Tm | N.d. | 0.10 |
| mm4_intergenic_Gm22537|Sp8_chr12_118786614_F | TCGTCGGCAGCGTCTGCAACGCACATGACACCAT | 61.1 | 0.10 |
| mm4_intergenic_Gm22537|Sp8_chr12_118786614_R | GTCTCGTGGGCTCGGTGCAAAACCATGGCTTAGGT | 57.9 | 0.10 |
| mm4_intergenic_Skint9|Gm12819_chr4_112435655_F | Primer3: not found at this Tm | N.d. | 0.10 |
| mm4_intergenic_Skint9|Gm12819_chr4_112435655_R | Primer3: not found at this Tm | N.d. | 0.10 |
| mm4_intron_Vps13d_chr4_145047445_F | Primer3: not found at this Tm | N.d. | 0.10 |
| mm4_intron_Vps13d_chr4_145047445_R | Primer3: not found at this Tm | N.d. | 0.10 |
| mm4_intron_Sdk2_chr11_113961008_F | TCGTCGGCAGCGTCCACCATCTGCCTCAAGTGGT | 59.9 | 0.10 |
| mm4_intron_Sdk2_chr11_113961008_R | GTCTCGTGGGCTCGGCTGGGCAGAGCTGAATACCC | 60.1 | 0.10 |
| mm4_intergenic_Gm14975|Gm4916_chrX_128344899_F | Primer3: not found at this Tm | N.d. | 0.10 |
| mm4_intergenic_Gm14975|Gm4916_chrX_128344899_R | Primer3: not found at this Tm | N.d. | 0.10 |
| mm4_intergenic_Klk1b9|Klk1b11_chr7_43992643_F | TCGTCGGCAGCGTCTGGTAGGGGTAGACCAAAGGT | 59.8 | 0.10 |
| mm4_intergenic_Klk1b9|Klk1b11_chr7_43992643_R | GTCTCGTGGGCTCGGGTGGTTTCTGGTCCTGAGCA | 59.8 | 0.10 |
| mm4_intergenic_Klk1b1|Klk1b9_chr7_43971827_F | Primer3: not found at this Tm | N.d. | 0.10 |
| mm4_intergenic_Klk1b1|Klk1b9_chr7_43971827_R | Primer3: not found at this Tm | N.d. | 0.10 |
| mm3_intron_St6galnac3_chr3_153506012_F | Primer3: not found at this Tm | N.d. | 0.10 |
| mm3_intron_St6galnac3_chr3_153506012_R | Primer3: not found at this Tm | N.d. | 0.10 |
| mm4_intergenic_Gm26662|Kirrel3_chr9_34664854_F | TCGTCGGCAGCGTCAGGGGTGAGAGGCTGTATCA | 59.6 | 0.10 |
| mm4_intergenic_Gm26662|Kirrel3_chr9_34664854_R | GTCTCGTGGGCTCGGGGCTGGGTCCTATGCTGTAC | 59.8 | 0.10 |
| mm4_intergenic_Tmed10|Fos_chr12_85393809_F | TCGTCGGCAGCGTCGGCCCTTTCCTTCCTTCACA | 59.8 | 0.10 |
| mm4_intergenic_Tmed10|Fos_chr12_85393809_R | GTCTCGTGGGCTCGGTTTTCTGCTGTGGCCTCGTC | 60.8 | 0.10 |
| mm3_intergenic_Gm4889|Dusp4_chr8_34554326_F | Primer3: not found at this Tm | N.d. | 0.09 |
| mm3_intergenic_Gm4889|Dusp4_chr8_34554326_R | Primer3: not found at this Tm | N.d. | 0.09 |
| mm4_intron_Poteg_chr8_27454780_F | Primer3: not found at this Tm | N.d. | 0.09 |
| mm4_intron_Poteg_chr8_27454780_R | Primer3: not found at this Tm | N.d. | 0.09 |
| mm4_intergenic_Gm24710|Gm24889_chr10_37972587_F | TCGTCGGCAGCGTCGTGGTGACTTCTACCTGCCC | 60.0 | 0.09 |
| mm4_intergenic_Gm24710|Gm24889_chr10_37972587_R | GTCTCGTGGGCTCGGTGCTCCTGCCACATAATGCT | 59.7 | 0.09 |
| mm4_intergenic_Zik1|Vmn1r68_chr7_10520742_F | Primer3: not found at this Tm | N.d. | 0.09 |
| mm4_intergenic_Zik1|Vmn1r68_chr7_10520742_R | Primer3: not found at this Tm | N.d. | 0.09 |
| mm4_intergenic_Rab7l1|Nucks1_chr1_131886996_F | Primer3: not found at this Tm | N.d. | 0.09 |
| mm4_intergenic_Rab7l1|Nucks1_chr1_131886996_R | Primer3: not found at this Tm | N.d. | 0.09 |
| mm4_intergenic_Gm8378|Gm8378/Gm16876_chr12_91683627_F | TCGTCGGCAGCGTCAGGTTCCGACATGTATGCGG | 60.1 | 0.09 |
| mm4_intergenic_Gm8378|Gm8378/Gm16876_chr12_91683627_R | GTCTCGTGGGCTCGGGGCAGTGGAGAGTGACACTC | 60.0 | 0.09 |
| mm4_intergenic_Gm14426|6720416L17Rik_chr2_74757211_F | Primer3: not found at this Tm | N.d. | 0.08 |
| mm4_intergenic_Gm14426|6720416L17Rik_chr2_74757211_R | Primer3: not found at this Tm | N.d. | 0.08 |
| mm4_intergenic_Gm11190|Sez6_chr11_77929802_F | TCGTCGGCAGCGTCTTGAGGGCCTCCTTCTTCCT | 60.1 | 0.08 |
| mm4_intergenic_Gm11190|Sez6_chr11_77929802_R | GTCTCGTGGGCTCGGGCTGTGCAGAACTAGAGGCT | 59.7 | 0.08 |
| mm4_intergenic_Palld|4930512H18Rik_chr8_61763730_F | Primer3: not found at this Tm | N.d. | 0.08 |
| mm4_intergenic_Palld|4930512H18Rik_chr8_61763730_R | Primer3: not found at this Tm | N.d. | 0.08 |
| mm4_intergenic_Tet2|Gm23011_chr3_133578599_F | Primer3: not found at this Tm | N.d. | 0.08 |
| mm4_intergenic_Tet2|Gm23011_chr3_133578599_R | Primer3: not found at this Tm | N.d. | 0.08 |
| mm4_intergenic_Zbbx|Serpini2_chr3_75165681_F | Primer3: not found at this Tm | N.d. | 0.08 |
| mm4_intergenic_Zbbx|Serpini2_chr3_75165681_R | Primer3: not found at this Tm | N.d. | 0.08 |
| mm4_intergenic_Mitf|Gm15531_chr6_97817020_F | TCGTCGGCAGCGTCCCCCATCAGTCACTCAGTCAC | 60.0 | 0.08 |
| mm4_intergenic_Mitf|Gm15531_chr6_97817020_R | GTCTCGTGGGCTCGGAAGGGGAGGAAGGAAAGGGG | 60.8 | 0.08 |
| mm4_intergenic_Aard|Slc30a8_chr15_52097822_F | TCGTCGGCAGCGTCAGAAAGCCTTCCAGAATCTGCA | 59.9 | 0.08 |
| mm4_intergenic_Aard|Slc30a8_chr15_52097822_R | GTCTCGTGGGCTCGGCTAGCACCTAGAAGCCTGGC | 59.8 | 0.08 |
| mm4_intron_Nrxn3_chr12_88791999_F | TCGTCGGCAGCGTCGCTGACAGTAGTTGGGTGGG | 60.3 | 0.08 |
| mm4_intron_Nrxn3_chr12_88791999_R | GTCTCGTGGGCTCGGTGACAGCCCACATTCTCTCC | 59.3 | 0.08 |
| mm4_intergenic_Pard3|mmu-mir-21c_chr8_128089035_F | TCGTCGGCAGCGTCTTCAGCAGTGCGGTCACATA | 59.6 | 0.08 |
| mm4_intergenic_Pard3|mmu-mir-21c_chr8_128089035_R | GTCTCGTGGGCTCGGTCTCCCTGATCCCTCTGCAG | 60.3 | 0.08 |
| mm4_intergenic_Gm13009|Gm26001_chr4_136132230_F | Primer3: not found at this Tm | N.d. | 0.08 |
| mm4_intergenic_Gm13009|Gm26001_chr4_136132230_R | Primer3: not found at this Tm | N.d. | 0.08 |
| mm4_intergenic_Gm24790|Klf6_chr13_5344061_F | Primer3: not found at this Tm | N.d. | 0.08 |
| mm4_intergenic_Gm24790|Klf6_chr13_5344061_R | Primer3: not found at this Tm | N.d. | 0.08 |
| mm4_intergenic_Gm12379|Gm12380_chr4_38153876_F | Primer3: not found at this Tm | N.d. | 0.07 |
| mm4_intergenic_Gm12379|Gm12380_chr4_38153876_R | Primer3: not found at this Tm | N.d. | 0.07 |
| mm4_intergenic_Gm12073|Gm12074_chr11_26977471_F | TCGTCGGCAGCGTCCCACTCATATGATCTCATCAGCCA | 60.0 | 0.07 |
| mm4_intergenic_Gm12073|Gm12074_chr11_26977471_R | GTCTCGTGGGCTCGGTGCAGCTAGTCCTACCAGTAGA | 59.7 | 0.07 |
| mm4_intergenic_Mrps6|Kcne2_chr16_92211539_F | TCGTCGGCAGCGTCACCTGGGCTTCTGTTAGCAC | 59.9 | 0.07 |
| mm4_intergenic_Mrps6|Kcne2_chr16_92211539_R | GTCTCGTGGGCTCGGTGCATATGGCTGCTACCAGA | 58.8 | 0.07 |
| mm4_intron_Atp4a_chr7_30717961_F | Primer3: not found at this Tm | N.d. | 0.07 |
| mm4_intron_Atp4a_chr7_30717961_R | Primer3: not found at this Tm | N.d. | 0.07 |
| mm4_intergenic_Rbbp8|Gm6277_chr18_11756187_F | Primer3: not found at this Tm | N.d. | 0.07 |
| mm4_intergenic_Rbbp8|Gm6277_chr18_11756187_R | Primer3: not found at this Tm | N.d. | 0.07 |
| mm4_intron_1500015L24Rik_chr19_20419618_F | TCGTCGGCAGCGTCTGCGAAGGACATAGCTGACA | 59.1 | 0.07 |
| mm4_intron_1500015L24Rik_chr19_20419618_R | GTCTCGTGGGCTCGGTTAAAATCAAGTATACAGCACCCTG | 57.3 | 0.07 |
| mm4_intron_Myoz1_chr14_20655911_F | Primer3: not found at this Tm | N.d. | 0.07 |
| mm4_intron_Myoz1_chr14_20655911_R | Primer3: not found at this Tm | N.d. | 0.07 |
| mm4_exon_A130066N16Rik_chr9_34918632_F | Primer3: not found at this Tm | N.d. | 0.07 |
| mm4_exon_A130066N16Rik_chr9_34918632_R | Primer3: not found at this Tm | N.d. | 0.07 |
| mm3_intron_Ddx10_chr9_53137510_F | Primer3: not found at this Tm | N.d. | 0.07 |
| mm3_intron_Ddx10_chr9_53137510_R | Primer3: not found at this Tm | N.d. | 0.07 |
| mm4_intergenic_Glrx3|Gm25798_chr7_138076983_F | Primer3: not found at this Tm | N.d. | 0.07 |
| mm4_intergenic_Glrx3|Gm25798_chr7_138076983_R | Primer3: not found at this Tm | N.d. | 0.07 |
| mm3_intergenic_Mrgprb1|Mrgprx2_chr7_48468442_F | Primer3: not found at this Tm | N.d. | 0.06 |
| mm3_intergenic_Mrgprb1|Mrgprx2_chr7_48468442_R | Primer3: not found at this Tm | N.d. | 0.06 |
| mm4_intergenic_Gm20696/Eif4e3|Gpr27_chr6_99683619_F | TCGTCGGCAGCGTCATATCCAGTGACTGCCCAGG | 58.8 | 0.06 |
| mm4_intergenic_Gm20696/Eif4e3|Gpr27_chr6_99683619_R | GTCTCGTGGGCTCGGGCCACCGTGGTTTTAGATGC | 59.8 | 0.06 |
| mm4_intergenic_Zfp191|Ino80c_chr18_24068482_F | Primer3: not found at this Tm | N.d. | 0.06 |
| mm4_intergenic_Zfp191|Ino80c_chr18_24068482_R | Primer3: not found at this Tm | N.d. | 0.06 |
| mm4_intergenic_Gm25715|N6amt1_chr16_86945899_F | Primer3: not found at this Tm | N.d. | 0.06 |
| mm4_intergenic_Gm25715|N6amt1_chr16_86945899_R | Primer3: not found at this Tm | N.d. | 0.06 |
| mm4_intron_Fam135a_chr1_24014074_F | Primer3: not found at this Tm | N.d. | 0.06 |
| mm4_intron_Fam135a_chr1_24014074_R | Primer3: not found at this Tm | N.d. | 0.06 |
| mm4_intron_Arhgap32_chr9_32122839_F | TCGTCGGCAGCGTCGGCTGTCTCTCAGAGCTGTG | 60.1 | 0.06 |
| mm4_intron_Arhgap32_chr9_32122839_R | GTCTCGTGGGCTCGGACTGTCCTCTCCCAGTCAGA | 59.2 | 0.06 |
| mm4_intron_Gbe1_chr16_70421894_F | Primer3: not found at this Tm | N.d. | 0.06 |
| mm4_intron_Gbe1_chr16_70421894_R | Primer3: not found at this Tm | N.d. | 0.06 |
| mm4_intergenic_RP24-225I21.1|Gm26662_chr9_34518385_F | Primer3: not found at this Tm | N.d. | 0.06 |
| mm4_intergenic_RP24-225I21.1|Gm26662_chr9_34518385_R | Primer3: not found at this Tm | N.d. | 0.06 |
| mm3_intergenic_Gm23326|Thy1_chr9_44013475_F | Primer3: not found at this Tm | N.d. | 0.06 |
| mm3_intergenic_Gm23326|Thy1_chr9_44013475_R | Primer3: not found at this Tm | N.d. | 0.06 |
| mm4_intergenic_Gm12361|Gm12362_chr4_34940020_F | Primer3: not found at this Tm | N.d. | 0.06 |
| mm4_intergenic_Gm12361|Gm12362_chr4_34940020_R | Primer3: not found at this Tm | N.d. | 0.06 |
| mm4_intron_Chrdl1_chrX_143309553_F | TCGTCGGCAGCGTCGCTTTGGGTATGGTGTTGGC | 59.7 | 0.06 |
| mm4_intron_Chrdl1_chrX_143309553_R | GTCTCGTGGGCTCGGTGAAGGAATTCACCAAAGCTGC | 59.7 | 0.06 |
| mm4_intron_Pcsk6_chr7_65887916_F | Primer3: not found at this Tm | N.d. | 0.06 |
| mm4_intron_Pcsk6_chr7_65887916_R | Primer3: not found at this Tm | N.d. | 0.06 |
| mm3_intergenic_Btla|Cd200_chr16_45294222_F | Primer3: not found at this Tm | N.d. | 0.06 |
| mm3_intergenic_Btla|Cd200_chr16_45294222_R | Primer3: not found at this Tm | N.d. | 0.06 |
| mm4_intron_Esyt2_chr12_116293418_F | TCGTCGGCAGCGTCTGGACGTTATTTTGAGGGCA | 57.4 | 0.06 |
| mm4_intron_Esyt2_chr12_116293418_R | GTCTCGTGGGCTCGGAGCAATATTTCCATAAGACAGGCA | 58.5 | 0.06 |
| mm4_intergenic_RP24-86O15.2|Gm10698_chr9_33450135_F | Primer3: not found at this Tm | N.d. | 0.05 |
| mm4_intergenic_RP24-86O15.2|Gm10698_chr9_33450135_R | Primer3: not found at this Tm | N.d. | 0.05 |
| mm4_intergenic_Gm7763|Gm5185_chr12_63057009_F | Primer3: not found at this Tm | N.d. | 0.05 |
| mm4_intergenic_Gm7763|Gm5185_chr12_63057009_R | Primer3: not found at this Tm | N.d. | 0.05 |
| mm4_intergenic_2410019O14Rik|Gm25407_chr2_157661501_F | Primer3: not found at this Tm | N.d. | 0.05 |
| mm4_intergenic_2410019O14Rik|Gm25407_chr2_157661501_R | Primer3: not found at this Tm | N.d. | 0.05 |
| mm4_intergenic_Mrgprx1|Mrgprb5_chr7_48113334_F | TCGTCGGCAGCGTCTGAAGTGTGAGTGCCTGTGC | 60.8 | 0.05 |
| mm4_intergenic_Mrgprx1|Mrgprb5_chr7_48113334_R | GTCTCGTGGGCTCGGAGGGGAAGACTTGTGTTGTGT | 59.4 | 0.05 |
| mm4_intron_Tbcd_chr11_121545244_F | TCGTCGGCAGCGTCTGTACTGGCTTGGCTGTGAC | 60.2 | 0.05 |
| mm4_intron_Tbcd_chr11_121545244_R | GTCTCGTGGGCTCGGACTCATTGTGAAACTCCATGGT | 57.8 | 0.05 |
| mm4_intergenic_Cldn1|Cldn16_chr16_26407440_F | TCGTCGGCAGCGTCCAGCGGTGCTATGGTTGAGA | 60.1 | 0.05 |
| mm4_intergenic_Cldn1|Cldn16_chr16_26407440_R | GTCTCGTGGGCTCGGACCTAAACATTGTGAAAGCTGCA | 59.3 | 0.05 |
| mm4_intron_Fmo5_chr3_97634963_F | Primer3: not found at this Tm | N.d. | 0.05 |
| mm4_intron_Fmo5_chr3_97634963_R | Primer3: not found at this Tm | N.d. | 0.05 |
| mm4_intergenic_Lrfn3|Tyrobp_chr7_30394435_F | Primer3: not found at this Tm | N.d. | 0.05 |
| mm4_intergenic_Lrfn3|Tyrobp_chr7_30394435_R | Primer3: not found at this Tm | N.d. | 0.05 |
| mm4_intron_Prkce_chr17_86630799_F | TCGTCGGCAGCGTCGTGGACTCCAGTCAAGGCTC | 60.0 | 0.05 |
| mm4_intron_Prkce_chr17_86630799_R | GTCTCGTGGGCTCGGGCCTGAAGCTAGCGGAGATT | 59.8 | 0.05 |
| mm4_intergenic_Cpeb2|C1qtnf7_chr5_43500895_F | Primer3: not found at this Tm | N.d. | 0.05 |
| mm4_intergenic_Cpeb2|C1qtnf7_chr5_43500895_R | Primer3: not found at this Tm | N.d. | 0.05 |
| mm4_intron_Dnm3_chr1_162289429_F | TCGTCGGCAGCGTCCAGCAGTGCAAAGGCTCAAG | 60.0 | 0.05 |
| mm4_intron_Dnm3_chr1_162289429_R | GTCTCGTGGGCTCGGAGGAGCTTGTGGTCTCTCCT | 59.8 | 0.05 |
| mm4_intergenic_Gm9034|Qrsl1_chr10_43851584_F | Primer3: not found at this Tm | N.d. | 0.05 |
| mm4_intergenic_Gm9034|Qrsl1_chr10_43851584_R | Primer3: not found at this Tm | N.d. | 0.05 |
| mm4_intron_Dgkb_chr12_38284604_F | Primer3: not found at this Tm | N.d. | 0.05 |
| mm4_intron_Dgkb_chr12_38284604_R | Primer3: not found at this Tm | N.d. | 0.05 |
| mm4_intron_Bbx_chr16_50380267_F | TCGTCGGCAGCGTCGAGGCGCCCTAAACATAGGT | 59.5 | 0.05 |
| mm4_intron_Bbx_chr16_50380267_R | GTCTCGTGGGCTCGGACTTCTGAAAGCCTGGCAGG | 60.2 | 0.05 |
| mm4_intergenic_Abcc1|Gm1758_chr16_14493654_F | Primer3: not found at this Tm | N.d. | 0.05 |
| mm4_intergenic_Abcc1|Gm1758_chr16_14493654_R | Primer3: not found at this Tm | N.d. | 0.05 |
| mm4_intergenic_Pex2|Gm25352_chr3_5737444_F | TCGTCGGCAGCGTCCCAAGCCCTCCCTACTTGTT | 59.3 | 0.04 |
| mm4_intergenic_Pex2|Gm25352_chr3_5737444_R | GTCTCGTGGGCTCGGTGTGTTTCCTTTAGCTTCACAGA | 58.2 | 0.04 |
| mm4_intron_Grm5_chr7_87863413_F | Primer3: not found at this Tm | N.d. | 0.04 |
| mm4_intron_Grm5_chr7_87863413_R | Primer3: not found at this Tm | N.d. | 0.04 |
| mm4_intergenic_Calm5/CALM5|Net1_chr13_3869868_F | TCGTCGGCAGCGTCTCACTCCCAGCAACGAATCC | 60.0 | 0.04 |
| mm4_intergenic_Calm5/CALM5|Net1_chr13_3869868_R | GTCTCGTGGGCTCGGAGGCCTGATTTGGTCAAGGG | 59.9 | 0.04 |
| mm4_intergenic_Gm27023|Gm25800_chr17_62452191_F | Primer3: not found at this Tm | N.d. | 0.04 |
| mm4_intergenic_Gm27023|Gm25800_chr17_62452191_R | Primer3: not found at this Tm | N.d. | 0.04 |
| mm4_intron_Cdkal1_chr13_29546330_F | Primer3: not found at this Tm | N.d. | 0.04 |
| mm4_intron_Cdkal1_chr13_29546330_R | Primer3: not found at this Tm | N.d. | 0.04 |
| mm4_intergenic_Nudt2|AI464131_chr4_41490911_F | Primer3: not found at this Tm | N.d. | 0.04 |
| mm4_intergenic_Nudt2|AI464131_chr4_41490911_R | Primer3: not found at this Tm | N.d. | 0.04 |
| mm4_intron_Adam5_chr8_24746396_F | TCGTCGGCAGCGTCATCGGCTACAAACATGCCCT | 59.7 | 0.04 |
| mm4_intron_Adam5_chr8_24746396_R | GTCTCGTGGGCTCGGAGATCAAAGCAGTGTCAGCA | 57.4 | 0.04 |
| mm4_intergenic_Cdh6|Gm9630_chr15_13781773_F | Primer3: not found at this Tm | N.d. | 0.04 |
| mm4_intergenic_Cdh6|Gm9630_chr15_13781773_R | Primer3: not found at this Tm | N.d. | 0.04 |
| mm4_intron_Nek1_chr8_61067071_F | Primer3: not found at this Tm | N.d. | 0.04 |
| mm4_intron_Nek1_chr8_61067071_R | Primer3: not found at this Tm | N.d. | 0.04 |
| mm3_intergenic_Gm6285|Gm22090_chrX_104967336_F | Primer3: not found at this Tm | N.d. | 0.04 |
| mm3_intergenic_Gm6285|Gm22090_chrX_104967336_R | Primer3: not found at this Tm | N.d. | 0.04 |
| mm4_intergenic_Slitrk1|Gm25901_chr14_108988088_F | Primer3: not found at this Tm | N.d. | 0.04 |
| mm4_intergenic_Slitrk1|Gm25901_chr14_108988088_R | Primer3: not found at this Tm | N.d. | 0.04 |
| mm3_intergenic_1700003H04Rik|Gm23673_chr3_124668194_F | TCGTCGGCAGCGTCTCCCCTTAAATTAATTGCAAGGTCT | 58.7 | 0.04 |
| mm3_intergenic_1700003H04Rik|Gm23673_chr3_124668194_R | GTCTCGTGGGCTCGGAGCTTCTCTCTGTCCTCAGGA | 59.6 | 0.04 |
| mm4_intergenic_Epha6|Gm24755_chr16_60227065_F | Primer3: not found at this Tm | N.d. | 0.04 |
| mm4_intergenic_Epha6|Gm24755_chr16_60227065_R | Primer3: not found at this Tm | N.d. | 0.04 |
| mm4_intron_Pard3b_chr1_62266095_F | Primer3: not found at this Tm | N.d. | 0.04 |
| mm4_intron_Pard3b_chr1_62266095_R | Primer3: not found at this Tm | N.d. | 0.04 |
| mm4_intron_Myh11_chr16_14209854_F | Primer3: not found at this Tm | N.d. | 0.04 |
| mm4_intron_Myh11_chr16_14209854_R | Primer3: not found at this Tm | N.d. | 0.04 |
| mm4_intergenic_Gm26257|Gp49a/Lilrb4_chr10_51191962_F | Primer3: not found at this Tm | N.d. | 0.04 |
| mm4_intergenic_Gm26257|Gp49a/Lilrb4_chr10_51191962_R | Primer3: not found at this Tm | N.d. | 0.04 |
| mm4_intron_Garem_chr18_21288317_F | Primer3: not found at this Tm | N.d. | 0.04 |
| mm4_intron_Garem_chr18_21288317_R | Primer3: not found at this Tm | N.d. | 0.04 |
| mm4_intergenic_Sesn1|Armc2_chr10_41914117_F | Primer3: not found at this Tm | N.d. | 0.04 |
| mm4_intergenic_Sesn1|Armc2_chr10_41914117_R | Primer3: not found at this Tm | N.d. | 0.04 |
| mm4_intron_Pir_chrX_164360203_F | Primer3: not found at this Tm | N.d. | 0.04 |
| mm4_intron_Pir_chrX_164360203_R | Primer3: not found at this Tm | N.d. | 0.04 |
| mm3_intergenic_Gm19932|Kcnip4_chr5_49449244_F | TCGTCGGCAGCGTCTGAAAGGGTTCTAAGAATGGGGT | 59.3 | 0.04 |
| mm3_intergenic_Gm19932|Kcnip4_chr5_49449244_R | GTCTCGTGGGCTCGGTCCAACCGAGATGTTCTGTGT | 59.3 | 0.04 |
| mm4_intron_Sugp2_chr8_70241328_F | Primer3: not found at this Tm | N.d. | 0.04 |
| mm4_intron_Sugp2_chr8_70241328_R | Primer3: not found at this Tm | N.d. | 0.04 |
| mm4_intergenic_4933409G03Rik|4932414N04Rik_chr2_68643896_F | TCGTCGGCAGCGTCTCACTCTGTCTTTGCTCACCA | 59.2 | 0.03 |
| mm4_intergenic_4933409G03Rik|4932414N04Rik_chr2_68643896_R | GTCTCGTGGGCTCGGTAAAGACTCCCCTGCTCCCA | 59.8 | 0.03 |
| mm4_intergenic_Vmn2r-ps111|Vmn2r89_chr14_51434480_F | Primer3: not found at this Tm | N.d. | 0.03 |
| mm4_intergenic_Vmn2r-ps111|Vmn2r89_chr14_51434480_R | Primer3: not found at this Tm | N.d. | 0.03 |
| mm4_intron_Cntnap2_chr6_46915008_F | TCGTCGGCAGCGTCTCAGCATCAACCATGTTCACA | 58.1 | 0.03 |
| mm4_intron_Cntnap2_chr6_46915008_R | GTCTCGTGGGCTCGGTGTGGCCAATGAGCTGCATA | 60.0 | 0.03 |
| mm4_intron_Pawr_chr10_108384210_F | Primer3: not found at this Tm | N.d. | 0.03 |
| mm4_intron_Pawr_chr10_108384210_R | Primer3: not found at this Tm | N.d. | 0.03 |
| mm4_intron_AW554918_chr18_25341393_F | TCGTCGGCAGCGTCTGCCTTTAAAAGACAATGAGTTGCA | 60.1 | 0.03 |
| mm4_intron_AW554918_chr18_25341393_R | GTCTCGTGGGCTCGGAGAGGAGGGATGGTGGTCAG | 60.3 | 0.03 |
| mm4_intergenic_Gm572|Gm13203_chr4_148681243_F | Primer3: not found at this Tm | N.d. | 0.03 |
| mm4_intergenic_Gm572|Gm13203_chr4_148681243_R | Primer3: not found at this Tm | N.d. | 0.03 |
| mm4_intergenic_Erbb2ip|Nln_chr13_104014325_F | Primer3: not found at this Tm | N.d. | 0.03 |
| mm4_intergenic_Erbb2ip|Nln_chr13_104014325_R | Primer3: not found at this Tm | N.d. | 0.03 |
| mm4_intergenic_Gm23022|Rab28_chr5_40444393_F | TCGTCGGCAGCGTCGAGGGGTTTGGACTTAGGGA | 58.3 | 0.03 |
| mm4_intergenic_Gm23022|Rab28_chr5_40444393_R | GTCTCGTGGGCTCGGCCACCAAATTCAAGTGGCACT | 59.3 | 0.03 |
| mm4_intergenic_Gm25650|Gm23584_chr10_47883658_F | Primer3: not found at this Tm | N.d. | 0.03 |
| mm4_intergenic_Gm25650|Gm23584_chr10_47883658_R | Primer3: not found at this Tm | N.d. | 0.03 |
| mm4_intergenic_Gm23763|Gm25609_chr1_137160879_F | Primer3: not found at this Tm | N.d. | 0.03 |
| mm4_intergenic_Gm23763|Gm25609_chr1_137160879_R | Primer3: not found at this Tm | N.d. | 0.03 |
| mm4_intergenic_Gm22582|Nedd1_chr10_92675133_F | Primer3: not found at this Tm | N.d. | 0.03 |
| mm4_intergenic_Gm22582|Nedd1_chr10_92675133_R | Primer3: not found at this Tm | N.d. | 0.03 |
| mm4_intergenic_Prrt3|Emc3_chr6_113501994_F | TCGTCGGCAGCGTCCTGCCGATCTCCTCGTCAAG | 60.2 | 0.03 |
| mm4_intergenic_Prrt3|Emc3_chr6_113501994_R | GTCTCGTGGGCTCGGCTCTGACACCATCTGGGCTG | 60.1 | 0.03 |
| mm4_intron_Zfp407_chr18_84355371_F | Primer3: not found at this Tm | N.d. | 0.03 |
| mm4_intron_Zfp407_chr18_84355371_R | Primer3: not found at this Tm | N.d. | 0.03 |
| mm2_intron_Arhgap21_chr2_20906411_F | Primer3: not found at this Tm | N.d. | 0.03 |
| mm2_intron_Arhgap21_chr2_20906411_R | Primer3: not found at this Tm | N.d. | 0.03 |
| mm4_intergenic_Pcdh20|Gm25886_chr14_88568741_F | Primer3: not found at this Tm | N.d. | 0.03 |
| mm4_intergenic_Pcdh20|Gm25886_chr14_88568741_R | Primer3: not found at this Tm | N.d. | 0.03 |
| mm4_intergenic_Gm11363|Cdkal1_chr13_29157131_F | TCGTCGGCAGCGTCGGTGAGGACAACGGGAATCA | 59.6 | 0.03 |
| mm4_intergenic_Gm11363|Cdkal1_chr13_29157131_R | GTCTCGTGGGCTCGGGCATTGCCCCATTCCTATGC | 59.6 | 0.03 |
| mm4_intergenic_Gm22733|Smg6_chr11_74940973_F | Primer3: not found at this Tm | N.d. | 0.03 |
| mm4_intergenic_Gm22733|Smg6_chr11_74940973_R | Primer3: not found at this Tm | N.d. | 0.03 |
| mm4_intron_Myof_chr19_37923291_F | TCGTCGGCAGCGTCCTGCCACTTGGGAAAATGCC | 60.0 | 0.03 |
| mm4_intron_Myof_chr19_37923291_R | GTCTCGTGGGCTCGGCATCCTCCCAACACTGGACC | 60.0 | 0.03 |
| mm4_intergenic_Mapk1|Gm22558_chr16_16992264_F | Primer3: not found at this Tm | N.d. | 0.03 |
| mm4_intergenic_Mapk1|Gm22558_chr16_16992264_R | Primer3: not found at this Tm | N.d. | 0.03 |
| mm4_intergenic_Olfr844|Olfr845_chr9_19327588_F | Primer3: not found at this Tm | N.d. | 0.03 |
| mm4_intergenic_Olfr844|Olfr845_chr9_19327588_R | Primer3: not found at this Tm | N.d. | 0.03 |
| mm4_intergenic_mmu-mir-6379|Gm10356_chr3_46955744_F | TCGTCGGCAGCGTCTCCACTTCAGGAAGAAAATACCT | 57.1 | 0.03 |
| mm4_intergenic_mmu-mir-6379|Gm10356_chr3_46955744_R | GTCTCGTGGGCTCGGATTTGGGGCTAAACGGGCTT | 60.2 | 0.03 |
| mm4_intron_Fam19a2_chr10_123617377_F | TCGTCGGCAGCGTCGCAGAAGAAAATGTTGCGAATGT | 59.0 | 0.03 |
| mm4_intron_Fam19a2_chr10_123617377_R | GTCTCGTGGGCTCGGTCCCAACACCATGTTACAAAGC | 59.3 | 0.03 |
| mm3_intron_Kctd8_chr5_69247924_F | Primer3: not found at this Tm | N.d. | 0.03 |
| mm3_intron_Kctd8_chr5_69247924_R | Primer3: not found at this Tm | N.d. | 0.03 |
| mm4_intron_Lamc3_chr2_31902358_F | TCGTCGGCAGCGTCCCCGGCACTCTACATTACCC | 59.8 | 0.03 |
| mm4_intron_Lamc3_chr2_31902358_R | GTCTCGTGGGCTCGGCACAAGGTCAAGGGACGTGA | 59.8 | 0.03 |
| mm4_intergenic_Gm11363|Cdkal1_chr13_29183436_F | TCGTCGGCAGCGTCCTGGCTCCTGCTTGGTCTAG | 59.8 | 0.03 |
| mm4_intergenic_Gm11363|Cdkal1_chr13_29183436_R | GTCTCGTGGGCTCGGGGTGCTCAATGGGGTCACAT | 60.3 | 0.03 |
| mm4_intergenic_Gm22603|Gria1_chr11_56511254_F | Primer3: not found at this Tm | N.d. | 0.03 |
| mm4_intergenic_Gm22603|Gria1_chr11_56511254_R | Primer3: not found at this Tm | N.d. | 0.03 |
| mm2_intron_Vstm2a_chr11_16332997_F | Primer3: not found at this Tm | N.d. | 0.02 |
| mm2_intron_Vstm2a_chr11_16332997_R | Primer3: not found at this Tm | N.d. | 0.02 |
| mm4_intergenic_Epha5|Gm24626_chr5_84953808_F | TCGTCGGCAGCGTCACAGATGCTGCTTCTGACTCA | 59.3 | 0.02 |
| mm4_intergenic_Epha5|Gm24626_chr5_84953808_R | GTCTCGTGGGCTCGGGCTGCTGAATAACCCAAATGCA | 60.0 | 0.02 |
| mm4_intergenic_Mbd2|Dcc_chr18_71163585_F | Primer3: not found at this Tm | N.d. | 0.02 |
| mm4_intergenic_Mbd2|Dcc_chr18_71163585_R | Primer3: not found at this Tm | N.d. | 0.02 |
| mm4_intron_Map3k1_chr13_111804844_F | Primer3: not found at this Tm | N.d. | 0.02 |
| mm4_intron_Map3k1_chr13_111804844_R | Primer3: not found at this Tm | N.d. | 0.02 |
| mm4_intergenic_Cabp5|Bsph1_chr7_13427787_F | Primer3: not found at this Tm | N.d. | 0.02 |
| mm4_intergenic_Cabp5|Bsph1_chr7_13427787_R | Primer3: not found at this Tm | N.d. | 0.02 |
| mm3_intergenic_Frmpd4|Gm8832_chrX_168158034_F | Primer3: not found at this Tm | N.d. | 0.02 |
| mm3_intergenic_Frmpd4|Gm8832_chrX_168158034_R | Primer3: not found at this Tm | N.d. | 0.02 |
| mm4_intergenic_Gm15064|Gm15065_chrX_75690528_F | Primer3: not found at this Tm | N.d. | 0.02 |
| mm4_intergenic_Gm15064|Gm15065_chrX_75690528_R | Primer3: not found at this Tm | N.d. | 0.02 |
| mm4_intergenic_Impg1|RP24-325L16.1_chr9_80794431_F | TCGTCGGCAGCGTCTGTGTGTTCTAAAGCCTATTTGAGA | 58.4 | 0.02 |
| mm4_intergenic_Impg1|RP24-325L16.1_chr9_80794431_R | GTCTCGTGGGCTCGGGAGTGTGTTTCCATGAAGCCA | 58.7 | 0.02 |
| mm4_intergenic_Gm22594|1110002J07Rik_chr10_66843498_F | TCGTCGGCAGCGTCATTCTGGGTGAGGTGTCCCT | 60.1 | 0.02 |
| mm4_intergenic_Gm22594|1110002J07Rik_chr10_66843498_R | GTCTCGTGGGCTCGGAAACTGAGGTGGGAAGGCTG | 59.8 | 0.02 |
| mm4_intron_Pard3b_chr1_62599030_F | Primer3: not found at this Tm | N.d. | 0.02 |
| mm4_intron_Pard3b_chr1_62599030_R | Primer3: not found at this Tm | N.d. | 0.02 |
| mm4_exon_Gm14266_chr2_171193401_F | TCGTCGGCAGCGTCCCTGGACTCATGGTTGACCC | 60.0 | 0.02 |
| mm4_exon_Gm14266_chr2_171193401_R | GTCTCGTGGGCTCGGACTGCTCGTACCTTGACTGC | 60.0 | 0.02 |
| mm4_intergenic_Pcdh18|Slc7a11_chr3_49910218_F | Primer3: not found at this Tm | N.d. | 0.02 |
| mm4_intergenic_Pcdh18|Slc7a11_chr3_49910218_R | Primer3: not found at this Tm | N.d. | 0.02 |
| mm3_intron_Eed_chr7_89973038_F | Primer3: not found at this Tm | N.d. | 0.02 |
| mm3_intron_Eed_chr7_89973038_R | Primer3: not found at this Tm | N.d. | 0.02 |
| mm4_intergenic_Gm14246|Gm22936_chr2_162714185_F | TCGTCGGCAGCGTCTTCAGAGCCCATCAGAAGCT | 58.7 | 0.02 |
| mm4_intergenic_Gm14246|Gm22936_chr2_162714185_R | GTCTCGTGGGCTCGGGCCCTGGTTAAGCCCCATAA | 59.7 | 0.02 |
| mm4_intergenic_Gm22331|Gm24937_chr1_112914337_F | Primer3: not found at this Tm | N.d. | 0.02 |
| mm4_intergenic_Gm22331|Gm24937_chr1_112914337_R | Primer3: not found at this Tm | N.d. | 0.02 |
| mm4_intron_Dgki_chr6_36870868_F | Primer3: not found at this Tm | N.d. | 0.02 |
| mm4_intron_Dgki_chr6_36870868_R | Primer3: not found at this Tm | N.d. | 0.02 |
| mm3_intron_Txndc11_chr16_11123140_F | Primer3: not found at this Tm | N.d. | 0.02 |
| mm3_intron_Txndc11_chr16_11123140_R | Primer3: not found at this Tm | N.d. | 0.02 |
| mm4_intergenic_Gm15218|Gm8317_chr14_45785030_F | TCGTCGGCAGCGTCTAGCGGTCTCTCCACTGTCA | 59.9 | 0.02 |
| mm4_intergenic_Gm15218|Gm8317_chr14_45785030_R | GTCTCGTGGGCTCGGTCCCTAATTCCCTCTATGTCAAGT | 58.4 | 0.02 |
| mm3_intron_Mgea5_chr19_45756901_F | TCGTCGGCAGCGTCTCCTGAAGCTGATCTCCCCA | 59.9 | 0.02 |
| mm3_intron_Mgea5_chr19_45756901_R | GTCTCGTGGGCTCGGGCCAGTCTTGTTCCCCTTGT | 60.1 | 0.02 |
| mm4_intergenic_Gm25974|Epha4_chr1_77258150_F | Primer3: not found at this Tm | N.d. | 0.02 |
| mm4_intergenic_Gm25974|Epha4_chr1_77258150_R | Primer3: not found at this Tm | N.d. | 0.02 |
| mm4_intergenic_Gm22098|Kdelr1_chr7_45880770_F | Primer3: not found at this Tm | N.d. | 0.02 |
| mm4_intergenic_Gm22098|Kdelr1_chr7_45880770_R | Primer3: not found at this Tm | N.d. | 0.02 |
| mm3_intron_Rspry1_chr8_94638866_F | Primer3: not found at this Tm | N.d. | 0.02 |
| mm3_intron_Rspry1_chr8_94638866_R | Primer3: not found at this Tm | N.d. | 0.02 |
| mm3_intergenic_Gm7164|Wdr44_chrX_23480495_F | Primer3: not found at this Tm | N.d. | 0.02 |
| mm3_intergenic_Gm7164|Wdr44_chrX_23480495_R | Primer3: not found at this Tm | N.d. | 0.02 |
| mm4_intron_Grik4_chr9_42729600_F | Primer3: not found at this Tm | N.d. | 0.02 |
| mm4_intron_Grik4_chr9_42729600_R | Primer3: not found at this Tm | N.d. | 0.02 |
| mm4_intron_Clec3b_chr9_123155987_F | TCGTCGGCAGCGTCTGCATCTGTGTGTTGTGGGT | 60.1 | 0.01 |
| mm4_intron_Clec3b_chr9_123155987_R | GTCTCGTGGGCTCGGACTTAGCCATTCCACCCAGC | 60.0 | 0.01 |
| mm4_intron_Tbc1d22a_chr15_86292517_F | Primer3: not found at this Tm | N.d. | 0.01 |
| mm4_intron_Tbc1d22a_chr15_86292517_R | Primer3: not found at this Tm | N.d. | 0.01 |
| mm4_intergenic_Acot2|Acot1_chr12_84006091_F | Primer3: not found at this Tm | N.d. | 0.01 |
| mm4_intergenic_Acot2|Acot1_chr12_84006091_R | Primer3: not found at this Tm | N.d. | 0.01 |
| mm4_intron_C130060C02Rik_chr19_15986943_F | Primer3: not found at this Tm | N.d. | 0.01 |
| mm4_intron_C130060C02Rik_chr19_15986943_R | Primer3: not found at this Tm | N.d. | 0.01 |
| mm4_exon_Zc3h7b_chr15_81793617_F | Primer3: not found at this Tm | N.d. | 0.01 |
| mm4_exon_Zc3h7b_chr15_81793617_R | Primer3: not found at this Tm | N.d. | 0.01 |
| mm3_intergenic_Gm4906|Gm14515_chrX_11368918_F | TCGTCGGCAGCGTCTCCAGCTCCTCTGATGGTCA | 59.9 | 0.01 |
| mm3_intergenic_Gm4906|Gm14515_chrX_11368918_R | GTCTCGTGGGCTCGGACTCCTGTGAACCCAGAGTT | 58.1 | 0.01 |
| mm4_intron_Fh1_chr1_175617095_F | TCGTCGGCAGCGTCACAACCACAAAAGGGCTGAGA | 60.0 | 0.01 |
| mm4_intron_Fh1_chr1_175617095_R | GTCTCGTGGGCTCGGACACTAGGCTCAGTCACCCA | 60.1 | 0.01 |
| mm4_intergenic_Lmo4|Hs2st1_chr3_144428389_F | TCGTCGGCAGCGTCGCAATGGAGCGGAGTCTGTA | 59.8 | 0.01 |
| mm4_intergenic_Lmo4|Hs2st1_chr3_144428389_R | GTCTCGTGGGCTCGGTGTGTGACAAAGGCTGGTGT | 60.0 | 0.01 |
| mm3_intergenic_Gm10205|4930435H24Rik_chr5_45154387_F | Primer3: not found at this Tm | N.d. | 0.01 |
| mm3_intergenic_Gm10205|4930435H24Rik_chr5_45154387_R | Primer3: not found at this Tm | N.d. | 0.01 |
| mm3_intergenic_Gm23377|Smarcc1_chr9_110129487_F | Primer3: not found at this Tm | N.d. | 0.01 |
| mm3_intergenic_Gm23377|Smarcc1_chr9_110129487_R | Primer3: not found at this Tm | N.d. | 0.01 |
| mm3_intergenic_Galntl6|Gm15881_chr8_58621168_F | TCGTCGGCAGCGTCTGGAACAGAAACCTGACACAGT | 59.7 | 0.01 |
| mm3_intergenic_Galntl6|Gm15881_chr8_58621168_R | GTCTCGTGGGCTCGGTGTGGCAGAAATTCTCTTCCT | 57.2 | 0.01 |
| mm4_intron_Pds5b_chr5_150780565_F | Primer3: not found at this Tm | N.d. | 0.01 |
| mm4_intron_Pds5b_chr5_150780565_R | Primer3: not found at this Tm | N.d. | 0.01 |
| mm4_intergenic_Sox5|Sox5/4933415D12Rik_chr6_143977388_F | TCGTCGGCAGCGTCCTGCTAACATGCTCCCAGCT | 60.1 | 0.01 |
| mm4_intergenic_Sox5|Sox5/4933415D12Rik_chr6_143977388_R | GTCTCGTGGGCTCGGATGCAACCACCATCAAGCCT | 60.2 | 0.01 |
| mm4_intron_Kcnj10_chr1_172346577_F | TCGTCGGCAGCGTCGGTGTCACCAATCCTGTCCT | 59.3 | 0.01 |
| mm4_intron_Kcnj10_chr1_172346577_R | GTCTCGTGGGCTCGGCCCTCTGCTGGGTTTCCAAA | 60.1 | 0.01 |
| mm4_intergenic_Gm12026|Gm12027_chr11_19454229_F | Primer3: not found at this Tm | N.d. | 0.01 |
| mm4_intergenic_Gm12026|Gm12027_chr11_19454229_R | Primer3: not found at this Tm | N.d. | 0.01 |
| mm4_intron_Cluh_chr11_74668941_F | Primer3: not found at this Tm | N.d. | 0.01 |
| mm4_intron_Cluh_chr11_74668941_R | Primer3: not found at this Tm | N.d. | 0.01 |
| mm4_intergenic_Gm25537|Gm24122_chr1_102019408_F | Primer3: not found at this Tm | N.d. | 0.01 |
| mm4_intergenic_Gm25537|Gm24122_chr1_102019408_R | Primer3: not found at this Tm | N.d. | 0.01 |
| mm3_intergenic_Med30|Ext1_chr15_52797333_F | Primer3: not found at this Tm | N.d. | 0.01 |
| mm3_intergenic_Med30|Ext1_chr15_52797333_R | Primer3: not found at this Tm | N.d. | 0.01 |
| mm2_intergenic_Nav3|E2f7_chr10_110148787_F | Primer3: not found at this Tm | N.d. | 0.01 |
| mm2_intergenic_Nav3|E2f7_chr10_110148787_R | Primer3: not found at this Tm | N.d. | 0.01 |
| mm4_intergenic_Gm25248|Gm26326_chr12_43229167_F | Primer3: not found at this Tm | N.d. | 0.01 |
| mm4_intergenic_Gm25248|Gm26326_chr12_43229167_R | Primer3: not found at this Tm | N.d. | 0.01 |
| mm4_intergenic_Nos1ap|Olfml2b_chr1_170592589_F | Primer3: not found at this Tm | N.d. | 0.01 |
| mm4_intergenic_Nos1ap|Olfml2b_chr1_170592589_R | Primer3: not found at this Tm | N.d. | 0.01 |
| mm2_intergenic_Gm11864|Gm11861_chr4_16447796_F | Primer3: not found at this Tm | N.d. | 0.01 |
| mm2_intergenic_Gm11864|Gm11861_chr4_16447796_R | Primer3: not found at this Tm | N.d. | 0.01 |
| mm4_intergenic_Gm7792|AC133095.2_chr5_JH584299_random_904360_F | Primer3: not found at this Tm | N.d. | 0.01 |
| mm4_intergenic_Gm7792|AC133095.2_chr5_JH584299_random_904360_R | Primer3: not found at this Tm | N.d. | 0.01 |
| mm4_intergenic_Gm7792|AC126035.1_chr5_JH584299_random_244864_F | Primer3: not found at this Tm | N.d. | 0.01 |
| mm4_intergenic_Gm7792|AC126035.1_chr5_JH584299_random_244864_R | Primer3: not found at this Tm | N.d. | 0.01 |
| mm4_intergenic_Gm7792|AC125178.2_chr5_JH584298_random_162110_F | Primer3: not found at this Tm | N.d. | 0.01 |
| mm4_intergenic_Gm7792|AC125178.2_chr5_JH584298_random_162110_R | Primer3: not found at this Tm | N.d. | 0.01 |
| mm4_intergenic_Gm3286|Gm7978_chr5_95724295_F | Primer3: not found at this Tm | N.d. | 0.01 |
| mm4_intergenic_Gm3286|Gm7978_chr5_95724295_R | Primer3: not found at this Tm | N.d. | 0.01 |
| mm4_intergenic_Gm3286|Gm7978_chr5_95584965_F | Primer3: not found at this Tm | N.d. | 0.01 |
| mm4_intergenic_Gm3286|Gm7978_chr5_95584965_R | Primer3: not found at this Tm | N.d. | 0.01 |
| mm4_intergenic_Gm3183|Gm3176_chr5_94945379_F | Primer3: not found at this Tm | N.d. | 0.01 |
| mm4_intergenic_Gm3183|Gm3176_chr5_94945379_R | Primer3: not found at this Tm | N.d. | 0.01 |
| mm4_intergenic_Gm3139|Gm3147_chr5_94606443_F | Primer3: not found at this Tm | N.d. | 0.01 |
| mm4_intergenic_Gm3139|Gm3147_chr5_94606443_R | Primer3: not found at this Tm | N.d. | 0.01 |
| mm4_intergenic_Gm3106|Gm16522_chr5_94296845_F | Primer3: not found at this Tm | N.d. | 0.01 |
| mm4_intergenic_Gm3106|Gm16522_chr5_94296845_R | Primer3: not found at this Tm | N.d. | 0.01 |
| mm4_intergenic_Gm16513|Gm10424_chr5_95262815_F | Primer3: not found at this Tm | N.d. | 0.01 |
| mm4_intergenic_Gm16513|Gm10424_chr5_95262815_R | Primer3: not found at this Tm | N.d. | 0.01 |
| mm4_intergenic_Gm16429|BC061212_chr5_94058675_F | Primer3: not found at this Tm | N.d. | 0.01 |
| mm4_intergenic_Gm16429|BC061212_chr5_94058675_R | Primer3: not found at this Tm | N.d. | 0.01 |
| mm4_intergenic_Gm16367|AC163611.1_chr5_JH584299_random_544581_F | Primer3: not found at this Tm | N.d. | 0.01 |
| mm4_intergenic_Gm16367|AC163611.1_chr5_JH584299_random_544581_R | Primer3: not found at this Tm | N.d. | 0.01 |
| mm4_intergenic_GM16522|AC140325.1_chr5_GL456354_random_15118_F | Primer3: not found at this Tm | N.d. | 0.01 |
| mm4_intergenic_GM16522|AC140325.1_chr5_GL456354_random_15118_R | Primer3: not found at this Tm | N.d. | 0.01 |
| mm4_intergenic_C87414|Gm16429_chr5_93919137_F | Primer3: not found at this Tm | N.d. | 0.01 |
| mm4_intergenic_C87414|Gm16429_chr5_93919137_R | Primer3: not found at this Tm | N.d. | 0.01 |
| mm4_intergenic_C87414|Gm16429_chr5_93708602_F | Primer3: not found at this Tm | N.d. | 0.01 |
| mm4_intergenic_C87414|Gm16429_chr5_93708602_R | Primer3: not found at this Tm | N.d. | 0.01 |
| mm4_intergenic_AC165294.2|AC165294.3_chr5_JH584297_random_39789_F | Primer3: not found at this Tm | N.d. | 0.01 |
| mm4_intergenic_AC165294.2|AC165294.3_chr5_JH584297_random_39789_R | Primer3: not found at this Tm | N.d. | 0.01 |
| mm4_intergenic_AC164084.2|AA792892_chr5_JH584296_random_152969_F | Primer3: not found at this Tm | N.d. | 0.01 |
| mm4_intergenic_AC164084.2|AA792892_chr5_JH584296_random_152969_R | Primer3: not found at this Tm | N.d. | 0.01 |
| mm4_intergenic_AC140325.3|Gap_chr5_GL456354_random_169128_F | Primer3: not found at this Tm | N.d. | 0.01 |
| mm4_intergenic_AC140325.3|Gap_chr5_GL456354_random_169128_R | Primer3: not found at this Tm | N.d. | 0.01 |
| mm4_intergenic_Gm22482|Rnls_chr19_33039890_F | Primer3: not found at this Tm | N.d. | 0.01 |
| mm4_intergenic_Gm22482|Rnls_chr19_33039890_R | Primer3: not found at this Tm | N.d. | 0.01 |
| mm4_exon_Pnpla3_chr15_84187032_F | Primer3: not found at this Tm | N.d. | 0.01 |
| mm4_exon_Pnpla3_chr15_84187032_R | Primer3: not found at this Tm | N.d. | 0.01 |
| mm4_intergenic_P4ha1|Gm10273_chr10_59373551_F | TCGTCGGCAGCGTCTACAGTCGAGCATGCCCAAG | 60.1 | 0.01 |
| mm4_intergenic_P4ha1|Gm10273_chr10_59373551_R | GTCTCGTGGGCTCGGTCCTTGCTTTCAATTTGGAGGAC | 59.4 | 0.01 |
| mm4_intron_Nfia_chr4_97931855_F | TCGTCGGCAGCGTCTGTGACTAGAGAGGTGGAAGGA | 59.6 | 0.01 |
| mm4_intron_Nfia_chr4_97931855_R | GTCTCGTGGGCTCGGTGCCACATTTTATTCCTCGAACC | 59.5 | 0.01 |
| mm3_intron_Ptprd_chr4_77169438_F | Primer3: not found at this Tm | N.d. | 0.00 |
| mm3_intron_Ptprd_chr4_77169438_R | Primer3: not found at this Tm | N.d. | 0.00 |
| mm4_intergenic_Irx1|Rpl9-ps4_chr13_72091305_F | Primer3: not found at this Tm | N.d. | 0.00 |
| mm4_intergenic_Irx1|Rpl9-ps4_chr13_72091305_R | Primer3: not found at this Tm | N.d. | 0.00 |
| mm4_intergenic_Gm24765|Rrs1_chr1_9469314_F | Primer3: not found at this Tm | N.d. | 0.00 |
| mm4_intergenic_Gm24765|Rrs1_chr1_9469314_R | Primer3: not found at this Tm | N.d. | 0.00 |
| mm4_intergenic_Gm7910|Khdrbs2_chr1_31881244_F | Primer3: not found at this Tm | N.d. | 0.00 |
| mm4_intergenic_Gm7910|Khdrbs2_chr1_31881244_R | Primer3: not found at this Tm | N.d. | 0.00 |
| mm4_intron_Cdh10_chr15_18959754_F | TCGTCGGCAGCGTCCCGCAGTACTGTCTGGTCAA | 59.6 | 0.00 |
| mm4_intron_Cdh10_chr15_18959754_R | GTCTCGTGGGCTCGGACACATTTGCAACCCTGTGG | 59.2 | 0.00 |
| mm4_intron_Mttp_chr3_138095612_F | TCGTCGGCAGCGTCACCAAGAGGATGAAGGTATTTCCA | 59.4 | 0.00 |
| mm4_intron_Mttp_chr3_138095612_R | GTCTCGTGGGCTCGGTGCAGTTGTGTGTGTTTGCC | 60.1 | 0.00 |
| mm4_intron_Shank2_chr7_144185548_F | TCGTCGGCAGCGTCAGAAATTCCCCTGCATGCCA | 59.9 | 0.00 |
| mm4_intron_Shank2_chr7_144185548_R | GTCTCGTGGGCTCGGCCACAATCCACAGCTCTGGT | 59.9 | 0.00 |
| mm4_intergenic_E130006D01Rik|Miat/MIAT_exon5_3/MIAT_exon5_2/Gm26953/MIAT_exon5_1_chr5_111974941_F | Primer3: not found at this Tm | N.d. | 0.00 |
| mm4_intergenic_E130006D01Rik|Miat/MIAT_exon5_3/MIAT_exon5_2/Gm26953/MIAT_exon5_1_chr5_111974941_R | Primer3: not found at this Tm | N.d. | 0.00 |
| mm4_intergenic_B930078G14Rik|Fam155a_chr8_8745620_F | Primer3: not found at this Tm | N.d. | 0.00 |
| mm4_intergenic_B930078G14Rik|Fam155a_chr8_8745620_R | Primer3: not found at this Tm | N.d. | 0.00 |
| mm4_intergenic_Cntn5|Gm25365_chr9_12061439_F | Primer3: not found at this Tm | N.d. | 0.00 |
| mm4_intergenic_Cntn5|Gm25365_chr9_12061439_R | Primer3: not found at this Tm | N.d. | 0.00 |
| mm4_intergenic_Gm23831|1700017G19Rik_chr3_39932750_F | Primer3: not found at this Tm | N.d. | 0.00 |
| mm4_intergenic_Gm23831|1700017G19Rik_chr3_39932750_R | Primer3: not found at this Tm | N.d. | 0.00 |
| mm4_intergenic_Astn1|Pappa2_chr1_158710783_F | Primer3: not found at this Tm | N.d. | 0.00 |
| mm4_intergenic_Astn1|Pappa2_chr1_158710783_R | Primer3: not found at this Tm | N.d. | 0.00 |
| mm4_intron_Rgs9_chr11_109292477_F | Primer3: not found at this Tm | N.d. | 0.00 |
| mm4_intron_Rgs9_chr11_109292477_R | Primer3: not found at this Tm | N.d. | 0.00 |
| mm4_intergenic_Casp12|Pdgfd_chr9_5795435_F | Primer3: not found at this Tm | N.d. | 0.00 |
| mm4_intergenic_Casp12|Pdgfd_chr9_5795435_R | Primer3: not found at this Tm | N.d. | 0.00 |
| mm4_exon_Tspan8_chr10_115835352_F | TCGTCGGCAGCGTCTCGGACAACACTGATGAGGC | 60.0 | 0.00 |
| mm4_exon_Tspan8_chr10_115835352_R | GTCTCGTGGGCTCGGGGCCAAAGCATTCTATTTACCTCC | 59.9 | 0.00 |
| mm4_intergenic_Mtpn|Gm23273_chr6_35939743_F | Primer3: not found at this Tm | N.d. | 0.00 |
| mm4_intergenic_Mtpn|Gm23273_chr6_35939743_R | Primer3: not found at this Tm | N.d. | 0.00 |
These only list off-targets that have primers in the table above. Primers underlined, off-targets in bold.
| mm4_intergenic_Gm10076|Gm22406_chr14_105719112 |
ACACTCGATATTGTTGGGCAATAATTTGGATTTCAAATTTATTTCTTAAATACAACATGAAAAAAAAAACCACTTTTAAA AAGTAAACATGTCCTTTTGGCAAGAAAGGAAAACATTGTTTCACTAACACTGCTCTCT |
| mm4_intergenic_Hs6st2|Gm14581_chrX_51603450 |
CTCTGGACAATGTGAGCATGAAGATACCAAAAATTGACCTATAGCCAAAAGGACATTGTTATTTTCTGTATAATGGTAAA TATTTGGAATTTGGGGGAAATAGACTATCATGAACGTATGGGTGA |
| mm4_intron_Rsu1_chr2_13125918 |
CAACCCATGTTTCCTCTTCTGATTCCTCCTAAAGGTCATGTTTATTTTTAATTCTTCACTATTNNNNNNNNNNNNNNNNN NNNNGCCCAATGAAACAAAAACCAAACACCAAAACAAAATTGTGGAATGTGTTTGCCAGG |
| mm4_intron_Cdk14_chr5_5260111 |
CGCAAAGTGGCTCTCAATGCACAGCTAATTAGTTTCTTCATCAAGACACTGTTCCCCTAAAGCTGTCAAGAAAAAGTCTA TTTCTGTCCTAAAGGACATTTTTCTCTTTCAAAGAATGTACAGGTTTAAACACAACT |
| mm3_intergenic_Gm22451|Sis_chr3_72745729 | ATTTCCTCCTTCAGGTGACTATTATATACCCAAAGGACATGTTGATCTTTCCTTGTCCATTTGGCATAATTGGATGT |
| mm4_intron_Unc80_chr1_66480556 |
ACTTCTCCTTGTGATACCTATGTGGAAACTCAATCATGTCATTTAGGTATTTACTCTGAACTCAACTTCTTATTTTCTCT CTGACAGTCTGTTTTAGAAAGTCAGCAACTTGCCTGC |
| mm3_intergenic_Gm15501|Gm5899_chr7_93587864 |
ACTACACCATATCCTATTCCCCTTTATATGTCTGAACACCCAAAGGACAAGGTTATGTATTAGTTGAAAATAGGGAATAC CAAAAAAGCCTTCACAGAGGAAGAAAACA |
| mm3_exon_Gm5431_chr11_48894615 |
CCAGTGATGCCTCATCCAGGCCAAAGGAAGATCTATAGTCATTCAAAGTCTGTTGCAACATCTCCATGTCCTTTTGGGTC AGTCCCCGGGATGGTATGGTAG |
| mm3_exon_Gm12187_chr11_49070168 |
CTCATCCAGGCCAAAGGAGGATCTATAGTCATTCAAAGTCTGTTGCAACATCTCCATGTCCTTTTGGGTCAGTCCCAGGG ATGGTATGGTAGCCCA |
| mm4_intergenic_Gm5652|Gm23752_chr12_5670296 |
GCCATCCACTGCATACCTGTACTTTCATTTTCAGTACAATTAGAAACATAATCATACACTTTGGGAAATCTGCTTTTGTA CATCAGTCTGAATTACCCATCATTGTCATCTACTAGCTTAATACTTGTGTGTCACTGC |
| mm4_intron_Nisch_chr14_31193017 |
GCTGGAGGTGGAAGAAAAGCTAGAACAAAGCAAGGAGCTTAGAAACAGAACCATAGAACAAAGCAAGGAGCTTAGAAACA GAACCAAGTATTTTCGGATCTCTGGATGTCGGAATGGTCTGCACAA |
| mm3_intergenic_Grik3|Ftl2/Mir692-2a_chr4_125497358 |
ACAGTGTGAGGCCTCAAAGCCCTCTCTGCCACCCTTCCCCCAAATGACTTGGTTCTGTTTCTTTGGAATCACCCCAGAGT CCAGGCGGTCCCTCCTGCTGGTGTTTTC |
| mm4_intergenic_Gm16294|Zfpm2_chr15_40551357 |
ACAGCCAGAGCATAGCCTTCTAAGGGTAGGGCTTGGTGAATTCTAATTGGTGAGTGTGCCTCTGTAGAACAGAAAACACA AACATGTTCTTTGGGTGAAAAGGATTAAAAACCAGGCAAAGCGTATGC |
| mm4_intergenic_Ftmt|Srfbp1_chr18_52353515 |
GAGGCTTCTGTCTGTCTGCATTGGAACACAGCCATCTCCTTTTGGGTGTGCTTTCTTTAATTTTTTGGTGGCAGGATTGT CA |
| mm4_exon_Olfr1280_chr2_111315742 |
CCTTTCCTCAGTTACCACCCCCAAACTGATAACTGACCTCCTAAAAGATAACAAAACCATTTCCTTTGGGGGCTGCATGA GCCAGATCCTCTG |
| mm3_intron_Kcnh7_chr2_62781340 |
GTGTTCAGATAAGTTATGGCAATCATTCTTTAAGAAATGATGAAACATACACATGTTCTTTTGGTTTAGTCAAAGGGACT ATAGAGTCAGTCAACATTGTAACATTCCGGTTAATGAACCAACCTATCCTACGTCCCA |
| mm3_intron_Sorcs3_chr19_48627012 |
GCAGACCCACCTTCTCCATCCTTAGTGCAATTCCTTAAGCTCCCTGCTTTCTACACTCACTCAGGCTTCCTGCCACCCAA AGGACTTCTTTATGTTTCCCTATTCATTGCAGTTTGAAAGAGGGCA |
| mm4_intergenic_RP24-399L6.2|9230113P08Rik_chr9_35864707 |
AGTGTCAGGAGCCAACAAGTGGAGCTTGAAAAGTGGATAAGCAACAAGTCTCCCAAAGGAGGTGGCTATATTTCAGGGCT GACTCATTAAGGAAGAGGTGGGATCTTGGA |
| mm3_intron_Insc_chr7_114809900 |
ATTGACTGTCTAGGCAGGGCCTTTATGTGAAACATACACATGTCCTATGGGAAAATAAGAAAGCAGGACAAAGGATTACA GATCAAGGAATCAGAGGGGTGGCTA |
| mm4_exon_Sis_chr3_72941081 |
AAATCCACAGATGTCCGCCCCTACCTAAAGGACAAGGTTGTGCTTTCTCAGTGTAGCCCTTCTAATTTACCTAGGACATC CCATTTTATGCACCAGTTAATCAACATTGCTCATGGTCTACTTGCACT |
| mm4_intergenic_Gm22537|Sp8_chr12_118786614 |
TGCAACGCACATGACACCATGATTCATGTCTAGTCTATTTTCCCAAATGACATGGAAATGTTTTCAATAAACATTATTTC TAAATAGTATTCCCATACATAATTAAATTAGTAATAATATACCTAAGCCATGGTTTTGCA |
| mm4_intron_Sdk2_chr11_113961008 |
CACCATCTGCCTCAAGTGGTTGTGACATGGCTGCAAAGATACCCATGTCCCTTAGGTCCTGACTTGCCAACCCAGTTACC TTTCCAGGCCCCGTTCTTGTTTAAGACATGGGTATTCAGCTCTGCCCAG |
| mm4_intergenic_Klk1b9|Klk1b11_chr7_43992643 |
TGGTAGGGGTAGACCAAAGGTTGAAGAGTGACTTAGAACCATGTCCTTTGGGCAGAGAATCAACCATCTTGGAAAAAGGG CTACTAAAAAGGGCTGCTGCTGCTCAGGACCAGAAACCAC |
| mm4_intergenic_Gm26662|Kirrel3_chr9_34664854 |
AGGGGTGAGAGGCTGTATCAAAGTGCTTTTTCTCTAGTCCATGTTAGCTTGTCACTTGGATCTTGGAGGTACATAGCCAT TTCCTTTAGGTGGAAAATATAGTAATGTCTTGTACAGCATAGGACCCAGCC |
| mm4_intergenic_Tmed10|Fos_chr12_85393809 |
GGCCCTTTCCTTCCTTCACACAGATGACACTTGCCTAAGGGACTTGGTTCTTTTTCAAATATAAGTTTAGGAAAATGTAC AACAGGCTTCAAAATAATACTTCATTACATAGGTGGTGACGAGGCCACAGCAGAAAA |
| mm4_intergenic_Gm24710|Gm24889_chr10_37972587 |
GTGGTGACTTCTACCTGCCCTGGGGTAGGACCTCTTCAAAATGCCTACAGGACATTTTTATTTTTCCAAATAAAAGCATT ATGTGGCAGGAGCA |
| mm4_intergenic_Gm8378|Gm8378/Gm16876_chr12_91683627 |
AGGTTCCGACATGTATGCGGCCGCAGTTATTATATCGCATCCCACAAACTAAGGCGCGGCTTCTGCTTTGTTTGGCTTTA GAATAATCACCATGACCTTTTGGAGAGTGTCACTCTCCACTGCC |
| mm4_intergenic_Gm11190|Sez6_chr11_77929802 |
TTGAGGGCCTCCTTCTTCCTCTACAGATATTAACATCAGCCACGTGGTTGTGTCCTGTTGAGTCCACTGAAATTCAGTAA CAAGCCTAACCATGTCCCTTGGGTCTGAATAATAGCCTCTAGTTCTGCACAGC |
| mm4_intergenic_Mitf|Gm15531_chr6_97817020 |
CCCCATCAGTCACTCAGTCACATTAAGCAGGAGAAACATAGCTCTGGAGCCCAAAGGACCTGGCTGTGTTTGTTTTTCTT CTTATCCACCCCCCCTTTCCTTCCTCCCCTT |
| mm4_intergenic_Aard|Slc30a8_chr15_52097822 |
AGAAAGCCTTCCAGAATCTGCAAAGTGATCTTAAATCCTTAATAACATCCTAAATGACATGGAAATGTATCTAGTCCTGA GACACTTGGGGGTGAGCATGCTGTGGGGCTCAACAGATGAGCCAGGCTTCTAGGTGCTAG |
| mm4_intron_Nrxn3_chr12_88791999 |
GCTGACAGTAGTTGGGTGGGGGCTATGATTATTTAACAAAAATCATATATAGCTTTTTTGGCCAGTTGGGCAAATTCCCA AAGGAGATGGGAATGTTCCCAGTTTAAGAAAGACGCTTTAGGAGAGAATGTGGGCTGTCA |
| mm4_intergenic_Pard3|mmu-mir-21c_chr8_128089035 |
TTCAGCAGTGCGGTCACATATTGAGCAAAGGGACAAAACAGACATAGACATTCTGAAAAGTGATTGGCTGCAGAGTCTAA AAGACACAAAGCCTTGTCCTTTTGGTCCCTTGCTGCAGAGGGATCAGGGAGA |
| mm4_intergenic_Gm12073|Gm12074_chr11_26977471 |
CCACTCATATGATCTCATCAGCCATAAATATTATAGTGTACACATAATACACACAATATGTTATATATGTGAAACAGAAC ACTGTCCATTTGGAGTACTGACTAGCTTTTGTGGGGGTTCTACTGGTAGGACTAGCTGCA |
| mm4_intergenic_Mrps6|Kcne2_chr16_92211539 |
ACCTGGGCTTCTGTTAGCACCGTTATTTGAACTGGATCATAAAGGGCTAACCCACAGGATTTGGTTCTGTTTCAGCAAAT CTCAATGAGAAAGATCTGGTAGCAGCCATATGCA |
| mm4_intron_1500015L24Rik_chr19_20419618 |
TGCGAAGGACATAGCTGACACTCTAAATCATAACCATGTCTTCTTGGTGTATTTATTAATTATATTGATTCAGGAATAAA AGCAGTAAATAGTTCCTTTTACAGGGTGCTGTATACTTGATTTTAA |
| mm4_intergenic_Gm20696/Eif4e3|Gpr27_chr6_99683619 |
ATATCCAGTGACTGCCCAGGGAAAGAACACCATGTTCTTTCGGTTTTGCCTACGGAAAAGGAACTTTATGGCAGTTCAAT GTCAAGACATGAAAGCTACATCTATGATATAAAGTAGCATCTAAAACCACGGTGGC |
| mm4_intron_Arhgap32_chr9_32122839 |
GGCTGTCTCTCAGAGCTGTGCTTATCAGTGGAAGTGAAACATAGCCCTGTCCATATGGACAAAAACTGACTAAAAATCCA GAGTTACCCATTGTCTCTGACTGGGAGAGGACAGT |
| mm4_intron_Chrdl1_chrX_143309553 |
GCTTTGGGTATGGTGTTGGCAGGATGTGCTATGCAAGTCCAAACTAGACACTGTGATGACAGTGAAGCATAACCTAAGTG ACATGGTGATGTTTGCAACTGTCACTCAATAGCAGCTTTGGTGAATTCCTTCA |
| mm4_intron_Esyt2_chr12_116293418 |
TGGACGTTATTTTGAGGGCATTATCTTTTTAATCTTCAGAAACATGACTATGACTTTTTGGAATATTGCCTGTCTTATGG AAATATTGCT |
| mm4_intergenic_Mrgprx1|Mrgprb5_chr7_48113334 |
TGAAGTGTGAGTGCCTGTGCAGAGAGGGAACTGAAACATGAGCATGTCTCTTGGGGTACTGCTAAGAGAAATGCAGTAAA TAAGAAAGACAAACCTAACACAACACAAGTCTTCCCCT |
| mm4_intron_Tbcd_chr11_121545244 |
TGTACTGGCTTGGCTGTGACCCCAAAGCACATGGTTCTGCTTATGACTTAGAGAAATTCAGTAAAATGCAGGGTTTATAT TTTAATGTGACTTGCAACTGAAAAAACCATGGAGTTTCACAATGAGT |
| mm4_intergenic_Cldn1|Cldn16_chr16_26407440 |
CAGCGGTGCTATGGTTGAGAACAGCTACATGTATGAGAGTGATGCTTGTCTCTTTTTTAGAAGTAGTATAAGCCAAACTC TATTTCCAGGATACCAAAAGGACCTTGCAATGTTTCTGCAGCTTTCACAATGTTTAGGT |
| mm4_intron_Prkce_chr17_86630799 |
GTGGACTCCAGTCAAGGCTCAACTGGGGAACCAAAGCCATGTCCTGTGGGCTAACCGAACATGGAAGTGTTGGAAGAGCA GGCAACATTATCCACTGAGGTAGTCATTCACACTAAGAATCTCCGCTAGCTTCAGGC |
| mm4_intron_Dnm3_chr1_162289429 |
CAGCAGTGCAAAGGCTCAAGACAGCACACAGCCCAGCATGTAAATGGATGTCTATCCAAAATGGCATGATAATGTTTCCC AAATGTGTTTCTCCTGTTAAGTCTAAACCAGGAGAGACCACAAGCTCCT |
| mm4_intron_Bbx_chr16_50380267 |
GAGGCGCCCTAAACATAGGTTAAGTGTCTAAGTAGAAAGAAACATAAAGAAGTCCGTTGGGATGGGAGGGACTACAGAGC ATCCATCAACATTTCCTTGAAAAGGCCTGCCAGGCTTTCAGAAGT |
| mm4_intergenic_Pex2|Gm25352_chr3_5737444 |
CCAAGCCCTCCCTACTTGTTTCATAAGTAATACTGTAAAAACATAACCATCCCTTTTAGGTAAACAGTCTGACAACATAT TTAAATTCACATGTTAAGTTTAATAATTGATTAATTTTCTGTGAAGCTAAAGGAAACACA |
| mm4_intergenic_Calm5/CALM5|Net1_chr13_3869868 |
TCACTCCCAGCAACGAATCCAACCCTAAGAGACATAACCCACTCCTTTAGGATGTGCATTAATTCCTACTGTGAATGGTA GCCCTTGACCAAATCAGGCCT |
| mm4_intron_Adam5_chr8_24746396 |
ATCGGCTACAAACATGCCCTATATTTTCAAAGAAGAATTATCTGGGAAACATTTCTATGACCTTTAGGGGCTACTACCAT TACTCCCACTTGAAAATTAAAATTTAAATTGCTGACACTGCTTTGATCT |
| mm3_intergenic_1700003H04Rik|Gm23673_chr3_124668194 |
TCCCCTTAAATTAATTGCAAGGTCTTTATTCATGTTTGAGTCATATTGTTATTTTTCCCGGGAAAGCTAACCATGTGCTT TAGGTGTTCCTGAGGACAGAGAGAAGCT |
| mm3_intergenic_Gm19932|Kcnip4_chr5_49449244 |
TGAAAGGGTTCTAAGAATGGGGTAATTTTTAAACCTGATATGAGTTTATCTTTCACTTCAAAGGATTCCTCTTGATAAAA TGAAATATCACCATGTCCTTAGAGACAGTATAATACAATACACAGAACATCTCGGTTGGA |
| mm4_intergenic_4933409G03Rik|4932414N04Rik_chr2_68643896 |
TCACTCTGTCTTTGCTCACCAAAATCTGAAGAAACATTTACATGTCCTTGTGGACACTGGCATTTGAATAAATGGCATGG AAAAGTCTGGGAGCAGGGGAGTCTTTA |
| mm4_intron_Cntnap2_chr6_46915008 |
TCAGCATCAACCATGTTCACATTAGAGACACACTGGGACTAAGATTTCTAATGGTGTAATTTTTATCCCAAAGAACATGC TCATGTGTCCCAATGATAAATGATGCAGCTTATGCAGCTCATTGGCCACA |
| mm4_intron_AW554918_chr18_25341393 |
TGCCTTTAAAAGACAATGAGTTGCACATTTCCTAAAGGAAATGCTTCTGTCTCCTTGTTGTTGCCTCCCTGACCACCATC CCTCCTCT |
| mm4_intergenic_Gm23022|Rab28_chr5_40444393 |
GAGGGGTTTGGACTTAGGGAATGAAAAGAGAAATGCTGTAGGAGAAATATACAACACAAAAGACAGAATGTAGTAGTGGT ACATGAAGAAACAGAACAATGTCATTGTGGAAAGGGCCAAGTGCCACTTGAATTTGGTGG |
| mm4_intergenic_Prrt3|Emc3_chr6_113501994 |
CTGCCGATCTCCTCGTCAAGCCCGCCCACAGGAGCGCGGGATACTTAACCCTTTCCTTTGGGAACGGTCTCTGTTCGCTG CTCCTCACCGCCCCTTTCTCACAAGCAGCACAGCCCAGATGGTGTCAGAG |
| mm4_intergenic_Gm11363|Cdkal1_chr13_29157131 | GGTGAGGACAACGGGAATCAAGAATCTTAAAGGACATGGTCATTGTTTTGCAACTAGTGCATAGGAATGGGGCAATGC |
| mm4_intron_Myof_chr19_37923291 |
CTGCCACTTGGGAAAATGCCACACTTCTTTTAGGGGGTTACATATCTTAGGATCCAGAAGTGGTGTTTCTAGGAATTTAC CAAAAAGAAACATGAGCATGTCCATGTGGTTCAAGAAGGTCCAGTGTTGGGAGGATG |
| mm4_intergenic_mmu-mir-6379|Gm10356_chr3_46955744 |
TCCACTTCAGGAAGAAAATACCTAAAAAGAAACATGTCCAGGTCCTCTTGGTAAGACAAATAGGTTACTCATGCAAGCAG GGCTTCTTGTTATCCTTTAAAACAACATGTTACAAGCCCGTTTAGCCCCAAAT |
| mm4_intron_Fam19a2_chr10_123617377 |
GCAGAAGAAAATGTTGCGAATGTCATGAATTTTCTAATGAAACTTAATCATTTCCTTGTGGTATTGGTGAGGTTTTTGAA ATGTAGCTTTGTAACATGGTGTTGGGA |
| mm4_intron_Lamc3_chr2_31902358 | CCCGGCACTCTACATTACCCACCTCCCAAAGCACATCGTTTTGTTTTTGTGGACTTCACGTCCCTTGACCTTGTG |
| mm4_intergenic_Gm11363|Cdkal1_chr13_29183436 |
CTGGCTCCTGCTTGGTCTAGAACTCTAGAAGCTGTGATAACAAAAAACCTAGGAAGTATCACCATGTCCTTGAGGATGTG ACCCCATTGAGCACC |
| mm4_intergenic_Epha5|Gm24626_chr5_84953808 |
ACAGATGCTGCTTCTGACTCAGAAATCATTGTGTGCTGATCTGAACATGAAAATTAAGCCTTTGATATTGCACTGCCTAA AGCACATGCTTGAGTTTCTGCATTTGGGTTATTCAGCAGC |
| mm4_intergenic_Impg1|RP24-325L16.1_chr9_80794431 |
TGTGTGTTCTAAAGCCTATTTGAGAATTTGAAAAGAAAGATTGCCATGTGCTTTTGGGCAGTGTGTGATTTCTTTTGTGT GCCATTGTGTCAGATTAACTCCTCTAAGTGGGATTACAATGGCTTCATGGAAACACACTC |
| mm4_intergenic_Gm22594|1110002J07Rik_chr10_66843498 |
ATTCTGGGTGAGGTGTCCCTTGGCTCAACTTCTTGACTTTTTTCCAGGGCTACAAAGAAACATCCCCATCTCCTGTCGGC AGCCAGCCTTCCCACCTCAGTTT |
| mm4_exon_Gm14266_chr2_171193401 |
CCTGGACTCATGGTTGACCCTCATTTCATGGATAGAACCACTCTCTATGGGAGAAGTGGAGTTTATAGATGGAAAGAACC TGAGAAGCCACTTCCTGAAAGGACATGGTGATCACTCTGCAGTCAAGGTACGAGCAGT |
| mm4_intergenic_Gm14246|Gm22936_chr2_162714185 |
TTCAGAGCCCATCAGAAGCTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNGAAGCTTATTTATGGGGCTTAACCAGGGC |
| mm4_intergenic_Gm15218|Gm8317_chr14_45785030 |
TAGCGGTCTCTCCACTGTCAGAACTACGCTCTATGTCACAGCCAAGAGGACAAGGTACTGTTTCCCTGTTATGAACTCTC TTGAGTATTTCTCATTGTTACTTGACATAGAGGGAATTAGGGA |
| mm3_intron_Mgea5_chr19_45756901 |
TCCTGAAGCTGATCTCCCCAAAGGTGGCAGCTGCTGCTGTCCAAAAGGCCATGGTCATGCTTCTCATTTGTCCTTTGGAG AAAGAAGCTACAAGGGGAACAAGACTGGC |
| mm4_intron_Clec3b_chr9_123155987 |
TGCATCTGTGTGTTGTGGGTGTGCTTTAGAGTCTGTGACTAAACACTTCTATGAGGCCTAGCTGTCAAATCCCTCAGGGA CATGGGAATGTTTCTCTTTAATATTCGCTGGGTGGAATGGCTAAGT |
| mm3_intergenic_Gm4906|Gm14515_chrX_11368918 |
TCCAGCTCCTCTGATGGTCACATGCCCTTAATTTATCTGGTATAGTAACCCTGCAAAAATACCCATGTCCTTTAGAGCAA GCCACAATCTTCAGATAATGTGGAACTCTGGGTTCACAGGAGT |
| mm4_intron_Fh1_chr1_175617095 |
ACAACCACAAAAGGGCTGAGATGTCAGGTAAGGTGAGAACAACTACACCTAGCTAGTTTTTCAACATGAAAACAGGCAGG GATTTGAATCATAACCATAGCCATTTGGATGGGTGACTGAGCCTAGTGT |
| mm4_intergenic_Lmo4|Hs2st1_chr3_144428389 |
GCAATGGAGCGGAGTCTGTACTGCAGCGCTCAGCACATAGTAGGGTTATTTTAAAAAACAAAAACACAAAACCCACCAAT AATGAAAAATAGCCATTTGCTTTAGGTTGGAGACACCAGCCTTTGTCACACA |
| mm3_intergenic_Galntl6|Gm15881_chr8_58621168 |
TGGAACAGAAACCTGACACAGTTACTGTTCATTTTTTTTTTCAGAATTTCAAAAGGACATGGTCAGATTTCTATTATATT TTTTGATAAAGGAAGAGAATTTCTGCCACA |
| mm4_intergenic_Sox5|Sox5/4933415D12Rik_chr6_143977388 |
CTGCTAACATGCTCCCAGCTGACCCAGAGGAAATGGTGATGTGTCACATGTCTTAAAGGTCATTTGTCTTTCTAAGTGAT TACTTCTTATTATCTAGAACAGGCTTGATGGTGGTTGCAT |
| mm4_intron_Kcnj10_chr1_172346577 |
GGTGTCACCAATCCTGTCCTTCTTATGCTTATGACTTCCTCTAGGACATGCTTGTGTTTCTGTTATACTGAACACCTTCT GCAGCAAAGGCACCTTTGGCTTTTGGAAACCCAGCAGAGGG |
| mm4_intergenic_P4ha1|Gm10273_chr10_59373551 |
TACAGTCGAGCATGCCCAAGGTCCCAGTGAATCTTCAGTCCTCTCCAAAATCACAAGGTTAGGTTTCATAATTTAAATAA TTGTATTACGTTCTGATTCTTTTTATAAGTCCTCCAAATTGAAAGCAAGGA |
| mm4_intron_Nfia_chr4_97931855 |
TGTGACTAGAGAGGTGGAAGGAGTAAATAGAGGAGCAAATAACATTCATTACCATGTCCTTTGGACAAGTTTAAGTCCAC AGATACACGAGTTAAATCATCGGTTCGAGGAATAAAATGTGGCA |
| mm4_intron_Cdh10_chr15_18959754 |
CCGCAGTACTGTCTGGTCAAAGGATTGATAACACCAAGAGCACTGGGTTATGTTTCTCAGACTGAATAAGAAATGTGTAA TGCTTAGAGCTGCCACTTGTAAGATGACCACAGGGTTGCAAATGTGT |
| mm4_intron_Mttp_chr3_138095612 |
ACCAAGAGGATGAAGGTATTTCCATCAGAAACCTAGCCATGGCTTTTTGGGAAACCTGAAGATTGGACAGAGTGATGTTC GAGTCCTGAAGCACTCTGCTAATTGAATGCTGAGGCAAACACACACAACTGCA |
| mm4_intron_Shank2_chr7_144185548 |
AGAAATTCCCCTGCATGCCAGTTTCCCATTGGTCCTTGTGTTAAGTGGCTCCTTCATTTCCTTGCAGGAAGTCTGAGGCC ACTTCTGTGGGCCTAAAGGCCATAGTTAGGTTTAGAAACCAGAGCTGTGGATTGTGG |
| mm4_exon_Tspan8_chr10_115835352 |
TCGGACAACACTGATGAGGCAAAAGACTTCCAGAAGGCCATGATTGTGTTTCAGTCGGAGGTAAATAGAATGCTTTGGCC |