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Contents:In the table below, Illumina Nextera Handle sequences have been added and highlighted in bold. Primers for the on-target have been added for convenience. The table below is sorted by the CFD off-target score. Sites with very low CFD scores < 0.02 are unlikely to be cleaved, see our study Haeussler et al. 2016, Figure 2.
In the protocol by Matthew Canver, Harvard, two PCRs are run: one PCR to amplify the potential off-target, then a second PCR to extend the handles with Illumina barcodes. Please click here to download the protocol. Alternatively, you can have a look at Fu et al, 2014.
If a primer was not found, the reason is usually that the region around the off-target is too repetitive. To avoid unspecific primers, all repeats are masked for the primer design (not for off-target search). If you think that we should change the parameters here or should use different primer3 settings, please let us know.
| Name | Primer Sequence | Tm | CFD Score |
|---|---|---|---|
| ontarget_mm0_exon_5730457N03Rik/Evx1_chr6_52313767_F | TCGTCGGCAGCGTCCCTTGTCGCCTTAGCTCCTC | 60.1 | 1.00 |
| ontarget_mm0_exon_5730457N03Rik/Evx1_chr6_52313767_R | GTCTCGTGGGCTCGGGTCCTTTCGGCTCTCCATCC | 60.1 | 1.00 |
| mm2_intron_Galnt7_chr8_57631683_F | TCGTCGGCAGCGTCCCATTCAGTGGGTGTCGCT | 60.0 | 0.94 |
| mm2_intron_Galnt7_chr8_57631683_R | GTCTCGTGGGCTCGGTCAAATTGATAACGGCTGCTCT | 58.3 | 0.94 |
| mm4_intergenic_Sgcd|Gm12178_chr11_48140301_F | Primer3: not found at this Tm | N.d. | 0.65 |
| mm4_intergenic_Sgcd|Gm12178_chr11_48140301_R | Primer3: not found at this Tm | N.d. | 0.65 |
| mm3_intron_Tjp2_chr19_24165982_F | TCGTCGGCAGCGTCACAGATCTTTCCATTGCTCTGTG | 58.9 | 0.61 |
| mm3_intron_Tjp2_chr19_24165982_R | GTCTCGTGGGCTCGGGGCATCCATTGGATTCTTTCAGA | 59.0 | 0.61 |
| mm3_intron_Kdm1b_chr13_47076361_F | Primer3: not found at this Tm | N.d. | 0.60 |
| mm3_intron_Kdm1b_chr13_47076361_R | Primer3: not found at this Tm | N.d. | 0.60 |
| mm4_intergenic_Gm22807|Gm23681_chr11_20927827_F | Primer3: not found at this Tm | N.d. | 0.57 |
| mm4_intergenic_Gm22807|Gm23681_chr11_20927827_R | Primer3: not found at this Tm | N.d. | 0.57 |
| mm4_intron_Adcy3_chr12_4136464_F | TCGTCGGCAGCGTCGCTGGGTGTTGTCCTGTGAA | 60.4 | 0.54 |
| mm4_intron_Adcy3_chr12_4136464_R | GTCTCGTGGGCTCGGGACAATGGACGTCCTCCCAA | 59.6 | 0.54 |
| mm4_intergenic_Gm15776|Etv5_chr16_22349000_F | TCGTCGGCAGCGTCCTCCTCGGCAGTTTAGGGAC | 59.8 | 0.53 |
| mm4_intergenic_Gm15776|Etv5_chr16_22349000_R | GTCTCGTGGGCTCGGAAACCCAGCTCTAAACCGGG | 59.9 | 0.53 |
| mm3_intron_Erg_chr16_95581434_F | TCGTCGGCAGCGTCGTGGCAGATGGACAGACCTC | 60.1 | 0.51 |
| mm3_intron_Erg_chr16_95581434_R | GTCTCGTGGGCTCGGTTGTTGAGGCTGGGGCTTAG | 59.9 | 0.51 |
| mm3_intergenic_Gm13794|Gm13796_chr2_95399909_F | Primer3: not found at this Tm | N.d. | 0.49 |
| mm3_intergenic_Gm13794|Gm13796_chr2_95399909_R | Primer3: not found at this Tm | N.d. | 0.49 |
| mm4_intergenic_Gm20703|Tgif1_chr17_70836279_F | TCGTCGGCAGCGTCTTTAGTGGGGATGGAAGCCC | 59.3 | 0.48 |
| mm4_intergenic_Gm20703|Tgif1_chr17_70836279_R | GTCTCGTGGGCTCGGGATAGCAGAGGTAACGGCCC | 59.9 | 0.48 |
| mm4_exon_Inpp5j_chr11_3504774_F | TCGTCGGCAGCGTCGGTCTGGCCTTCCATGTCTG | 60.3 | 0.47 |
| mm4_exon_Inpp5j_chr11_3504774_R | GTCTCGTGGGCTCGGCATCACTGGTTCCTGGGAGC | 60.3 | 0.47 |
| mm4_intron_Tnfrsf1a_chr6_125354408_F | TCGTCGGCAGCGTCAATGTGGTGAACTAGGGCGG | 60.0 | 0.45 |
| mm4_intron_Tnfrsf1a_chr6_125354408_R | GTCTCGTGGGCTCGGAAAGCCTTTCCCAGGATCCC | 59.6 | 0.45 |
| mm4_exon_Cd177_chr7_24745153_F | TCGTCGGCAGCGTCGCACAGGTGGGAAGAACAGA | 59.8 | 0.41 |
| mm4_exon_Cd177_chr7_24745153_R | GTCTCGTGGGCTCGGTCAGCCTTCCTGGGGAGTAA | 59.8 | 0.41 |
| mm4_intergenic_C330019F10Rik|A830035A12Rik/Gm11649_chr11_107529530_F | TCGTCGGCAGCGTCTATCTGACAGTTCTGCGGCC | 59.8 | 0.40 |
| mm4_intergenic_C330019F10Rik|A830035A12Rik/Gm11649_chr11_107529530_R | GTCTCGTGGGCTCGGTTTTGCTCCCACAACCCTGT | 60.0 | 0.40 |
| mm4_intron_D030068K23Rik_chr8_109087403_F | TCGTCGGCAGCGTCGCTCACAGCTGTACAGAGCA | 60.0 | 0.39 |
| mm4_intron_D030068K23Rik_chr8_109087403_R | GTCTCGTGGGCTCGGGCCATGAGCTAGCTACTGAAG | 58.2 | 0.39 |
| mm4_intergenic_Megf9|Gm11227_chr4_70932307_F | Primer3: not found at this Tm | N.d. | 0.38 |
| mm4_intergenic_Megf9|Gm11227_chr4_70932307_R | Primer3: not found at this Tm | N.d. | 0.38 |
| mm4_intron_Gm16080_chr4_131698052_F | Primer3: not found at this Tm | N.d. | 0.37 |
| mm4_intron_Gm16080_chr4_131698052_R | Primer3: not found at this Tm | N.d. | 0.37 |
| mm3_intergenic_Gm17131|Tmem132d_chr5_127896524_F | Primer3: not found at this Tm | N.d. | 0.36 |
| mm3_intergenic_Gm17131|Tmem132d_chr5_127896524_R | Primer3: not found at this Tm | N.d. | 0.36 |
| mm3_intron_Rsrc1_chr3_67173085_F | Primer3: not found at this Tm | N.d. | 0.35 |
| mm3_intron_Rsrc1_chr3_67173085_R | Primer3: not found at this Tm | N.d. | 0.35 |
| mm4_intergenic_Gm11351|Gm11352_chr13_26158942_F | Primer3: not found at this Tm | N.d. | 0.34 |
| mm4_intergenic_Gm11351|Gm11352_chr13_26158942_R | Primer3: not found at this Tm | N.d. | 0.34 |
| mm4_intergenic_Prcc|Hdgf_chr3_87886713_F | TCGTCGGCAGCGTCGTGCTGTGCAACTGCTCTTC | 60.0 | 0.34 |
| mm4_intergenic_Prcc|Hdgf_chr3_87886713_R | GTCTCGTGGGCTCGGGGACATGGCAAGTAGAGGGC | 60.4 | 0.34 |
| mm4_intron_Auts2_chr5_132473142_F | TCGTCGGCAGCGTCTGCCAGGCAAGAAGACACTT | 59.8 | 0.34 |
| mm4_intron_Auts2_chr5_132473142_R | GTCTCGTGGGCTCGGGGAGCTGGCATCGTTTCCTA | 59.8 | 0.34 |
| mm4_intron_Daam1_chr12_71928517_F | Primer3: not found at this Tm | N.d. | 0.33 |
| mm4_intron_Daam1_chr12_71928517_R | Primer3: not found at this Tm | N.d. | 0.33 |
| mm4_exon_Hmcn2_chr2_31453118_F | TCGTCGGCAGCGTCCTGATGGACTCCTGCTCGTG | 60.1 | 0.33 |
| mm4_exon_Hmcn2_chr2_31453118_R | GTCTCGTGGGCTCGGCCTGTTTGCTTAGGGTGGGT | 59.8 | 0.33 |
| mm4_intron_Fggy_chr4_95583855_F | TCGTCGGCAGCGTCATGTGAGCTCTCGAGGGGAA | 60.3 | 0.33 |
| mm4_intron_Fggy_chr4_95583855_R | GTCTCGTGGGCTCGGTAAAGCTCACAGCCTCCCCT | 60.5 | 0.33 |
| mm4_intergenic_Gm22603|Gria1_chr11_57005162_F | TCGTCGGCAGCGTCGAGAAATGGTCAGGCCTCCC | 60.1 | 0.33 |
| mm4_intergenic_Gm22603|Gria1_chr11_57005162_R | GTCTCGTGGGCTCGGTACTGTTGCTCTGCCTGCAG | 60.3 | 0.33 |
| mm4_intergenic_Tmem17|Gm26829_chr11_22593788_F | Primer3: not found at this Tm | N.d. | 0.33 |
| mm4_intergenic_Tmem17|Gm26829_chr11_22593788_R | Primer3: not found at this Tm | N.d. | 0.33 |
| mm4_intergenic_Ahcyl1|Csf1_chr3_107713511_F | Primer3: not found at this Tm | N.d. | 0.33 |
| mm4_intergenic_Ahcyl1|Csf1_chr3_107713511_R | Primer3: not found at this Tm | N.d. | 0.33 |
| mm4_intergenic_1190002N15Rik|Gm24178_chr9_94538972_F | Primer3: not found at this Tm | N.d. | 0.33 |
| mm4_intergenic_1190002N15Rik|Gm24178_chr9_94538972_R | Primer3: not found at this Tm | N.d. | 0.33 |
| mm4_intergenic_Rbm15|Gm24383_chr3_107378002_F | TCGTCGGCAGCGTCCCTCACCGAGTCTTTGCTCC | 60.3 | 0.32 |
| mm4_intergenic_Rbm15|Gm24383_chr3_107378002_R | GTCTCGTGGGCTCGGTGGAGAAGCCAATGATCTTTCTGT | 60.2 | 0.32 |
| mm4_intron_4930471C04Rik_chr14_64100070_F | TCGTCGGCAGCGTCAGTGGTGGCTGATACAAGCC | 60.0 | 0.32 |
| mm4_intron_4930471C04Rik_chr14_64100070_R | GTCTCGTGGGCTCGGGAGGTCTGTGCTCTGAACCC | 60.0 | 0.32 |
| mm4_intergenic_Gm22610|Dpp10_chr1_123152467_F | Primer3: not found at this Tm | N.d. | 0.32 |
| mm4_intergenic_Gm22610|Dpp10_chr1_123152467_R | Primer3: not found at this Tm | N.d. | 0.32 |
| mm3_intron_Slc25a48_chr13_56468640_F | TCGTCGGCAGCGTCAAACTGTGCTCCAAGGCCAG | 60.8 | 0.31 |
| mm3_intron_Slc25a48_chr13_56468640_R | GTCTCGTGGGCTCGGTTGAATCCAGCTCCAAGGGG | 59.6 | 0.31 |
| mm3_exon_Clasp2_chr9_113868656_F | Primer3: not found at this Tm | N.d. | 0.31 |
| mm3_exon_Clasp2_chr9_113868656_R | Primer3: not found at this Tm | N.d. | 0.31 |
| mm4_intron_Sept9_chr11_117222438_F | TCGTCGGCAGCGTCTCTAGCCAAGATGCTGCAGG | 59.8 | 0.31 |
| mm4_intron_Sept9_chr11_117222438_R | GTCTCGTGGGCTCGGGGGGTGGGGAACGTAGATTG | 60.1 | 0.31 |
| mm4_intergenic_Usp42|D130017N08Rik_chr5_143748279_F | Primer3: not found at this Tm | N.d. | 0.31 |
| mm4_intergenic_Usp42|D130017N08Rik_chr5_143748279_R | Primer3: not found at this Tm | N.d. | 0.31 |
| mm4_intergenic_Cables1|Tmem241_chr18_11953589_F | TCGTCGGCAGCGTCCAGGGCCTCTCACACTTGTT | 59.8 | 0.30 |
| mm4_intergenic_Cables1|Tmem241_chr18_11953589_R | GTCTCGTGGGCTCGGAATGGGATTTGTGGGCCAGG | 60.6 | 0.30 |
| mm3_intergenic_Gm5161|Ephb1_chr9_101472505_F | TCGTCGGCAGCGTCTATGTTGCTGACAGCTGGGG | 60.0 | 0.30 |
| mm3_intergenic_Gm5161|Ephb1_chr9_101472505_R | GTCTCGTGGGCTCGGAAGCTCTGTCACAGGGAAGC | 59.9 | 0.30 |
| mm3_intron_Ldlrad3_chr2_102097451_F | TCGTCGGCAGCGTCCACCTGGGGTCAGCATACAG | 60.1 | 0.30 |
| mm3_intron_Ldlrad3_chr2_102097451_R | GTCTCGTGGGCTCGGAGGAATGACTCAAAGCCTGCT | 59.6 | 0.30 |
| mm4_intergenic_Gm11922|Map3k7_chr4_31803612_F | TCGTCGGCAGCGTCGGCAGTGAGACCACCAGAAT | 59.6 | 0.30 |
| mm4_intergenic_Gm11922|Map3k7_chr4_31803612_R | GTCTCGTGGGCTCGGCTCCTTAAGAGCACCGTGGG | 60.1 | 0.30 |
| mm4_intergenic_Gm5424|2010107G23Rik_chr10_62100046_F | Primer3: not found at this Tm | N.d. | 0.28 |
| mm4_intergenic_Gm5424|2010107G23Rik_chr10_62100046_R | Primer3: not found at this Tm | N.d. | 0.28 |
| mm4_intergenic_Wdr52|Boc_chr16_44483750_F | Primer3: not found at this Tm | N.d. | 0.28 |
| mm4_intergenic_Wdr52|Boc_chr16_44483750_R | Primer3: not found at this Tm | N.d. | 0.28 |
| mm4_intron_Cdkl5_chrX_160994153_F | TCGTCGGCAGCGTCAGAAGGACCAGGGCTGAGAG | 60.6 | 0.27 |
| mm4_intron_Cdkl5_chrX_160994153_R | GTCTCGTGGGCTCGGGAAAGCCCTTTTCCGCTAGC | 59.5 | 0.27 |
| mm4_intergenic_Gm23950|Gm11218_chr4_64635323_F | TCGTCGGCAGCGTCTACCCGAGGTACCTGTGACC | 60.3 | 0.27 |
| mm4_intergenic_Gm23950|Gm11218_chr4_64635323_R | GTCTCGTGGGCTCGGGCCATGCTTCCAGGTTTGTG | 60.0 | 0.27 |
| mm4_intergenic_Snrnp40|Nkain1_chr4_130529176_F | Primer3: not found at this Tm | N.d. | 0.27 |
| mm4_intergenic_Snrnp40|Nkain1_chr4_130529176_R | Primer3: not found at this Tm | N.d. | 0.27 |
| mm3_intergenic_Bambi|Gm23643_chr18_3667516_F | TCGTCGGCAGCGTCGTCTAAATGGCCCCGTCAGT | 59.7 | 0.27 |
| mm3_intergenic_Bambi|Gm23643_chr18_3667516_R | GTCTCGTGGGCTCGGTAGGTCTCTCTCCCAGGCTG | 59.7 | 0.27 |
| mm4_intron_Me3_chr7_89682443_F | TCGTCGGCAGCGTCTTGTCACCAAGGCCAGTACC | 59.8 | 0.27 |
| mm4_intron_Me3_chr7_89682443_R | GTCTCGTGGGCTCGGAGCACACGGATGAGGCTATG | 59.8 | 0.27 |
| mm4_exon_Pglyrp3_chr3_92014660_F | Primer3: not found at this Tm | N.d. | 0.27 |
| mm4_exon_Pglyrp3_chr3_92014660_R | Primer3: not found at this Tm | N.d. | 0.27 |
| mm2_intron_1600029I14Rik_chr9_99465132_F | TCGTCGGCAGCGTCGTTAGACAGGCTCCCACTGG | 59.7 | 0.26 |
| mm2_intron_1600029I14Rik_chr9_99465132_R | GTCTCGTGGGCTCGGCCTCCACCCGTTGTATCCAG | 59.8 | 0.26 |
| mm4_intron_Fhit_chr14_9607181_F | TCGTCGGCAGCGTCCCGCTCCCTGTGTACACATC | 60.4 | 0.26 |
| mm4_intron_Fhit_chr14_9607181_R | GTCTCGTGGGCTCGGCACAATGGCGTTCACAGCAA | 59.9 | 0.26 |
| mm4_intron_Prdm2_chr4_143116098_F | Primer3: not found at this Tm | N.d. | 0.26 |
| mm4_intron_Prdm2_chr4_143116098_R | Primer3: not found at this Tm | N.d. | 0.26 |
| mm3_intergenic_Chst14|Gm14089_chr2_118988149_F | TCGTCGGCAGCGTCTCTTCCCGTCTTCCCTGTTG | 59.3 | 0.26 |
| mm3_intergenic_Chst14|Gm14089_chr2_118988149_R | GTCTCGTGGGCTCGGCAAGATGCTGCCAGGGAAGA | 60.0 | 0.26 |
| mm4_intron_Btbd11_chr10_85508465_F | TCGTCGGCAGCGTCCTGGTGGCACCTCTCCTAGT | 60.6 | 0.25 |
| mm4_intron_Btbd11_chr10_85508465_R | GTCTCGTGGGCTCGGATGCTTTCTCCTCGTGCCTC | 60.1 | 0.25 |
| mm4_intergenic_Cdh22|Gm25569_chr2_165240373_F | Primer3: not found at this Tm | N.d. | 0.25 |
| mm4_intergenic_Cdh22|Gm25569_chr2_165240373_R | Primer3: not found at this Tm | N.d. | 0.25 |
| mm4_intron_Prr5_chr15_84686645_F | TCGTCGGCAGCGTCGAGGGGTTTCAGGCCACTAC | 60.0 | 0.24 |
| mm4_intron_Prr5_chr15_84686645_R | GTCTCGTGGGCTCGGAGTCAGAGCAGTGCTGGTTG | 60.2 | 0.24 |
| mm4_intron_Cdkl4_chr17_80543943_F | TCGTCGGCAGCGTCATCATCTCATGGCTCCAGCG | 59.9 | 0.23 |
| mm4_intron_Cdkl4_chr17_80543943_R | GTCTCGTGGGCTCGGCACGTTCTCCAGCTAGGGTG | 60.1 | 0.23 |
| mm4_exon_Galntl6_chr8_57777078_F | TCGTCGGCAGCGTCACGTCTCCTGGACAGCCTAT | 60.0 | 0.23 |
| mm4_exon_Galntl6_chr8_57777078_R | GTCTCGTGGGCTCGGTGAACTGTGTTGTTGCAGGC | 59.5 | 0.23 |
| mm4_intergenic_Serp2|Lacc1_chr14_76661920_F | TCGTCGGCAGCGTCAGAGGTTCGGTTGGATGCTG | 60.0 | 0.22 |
| mm4_intergenic_Serp2|Lacc1_chr14_76661920_R | GTCTCGTGGGCTCGGTGCAGAGCTTTGAGTGGAGG | 59.9 | 0.22 |
| mm4_intron_Ghrh_chr2_157342362_F | TCGTCGGCAGCGTCTTCCAACCCCACTTTCACCC | 60.1 | 0.22 |
| mm4_intron_Ghrh_chr2_157342362_R | GTCTCGTGGGCTCGGAGGCTGAGTCCTAGCCATGA | 60.0 | 0.22 |
| mm4_intergenic_Bcl6|1110054M08Rik_chr16_24139866_F | Primer3: not found at this Tm | N.d. | 0.22 |
| mm4_intergenic_Bcl6|1110054M08Rik_chr16_24139866_R | Primer3: not found at this Tm | N.d. | 0.22 |
| mm4_intron_Phf19_chr2_34903962_F | TCGTCGGCAGCGTCAGCCCAGCATGTTCCTTTGT | 60.1 | 0.22 |
| mm4_intron_Phf19_chr2_34903962_R | GTCTCGTGGGCTCGGCCGGTAGGTGATCAGCTTCC | 59.8 | 0.22 |
| mm4_intergenic_Slitrk6|Gm22802_chr14_111088590_F | Primer3: not found at this Tm | N.d. | 0.22 |
| mm4_intergenic_Slitrk6|Gm22802_chr14_111088590_R | Primer3: not found at this Tm | N.d. | 0.22 |
| mm4_exon_Ube2o_chr11_116545745_F | TCGTCGGCAGCGTCTAGGCTGCTCCAATGCTCAG | 59.8 | 0.22 |
| mm4_exon_Ube2o_chr11_116545745_R | GTCTCGTGGGCTCGGGTGGTGGAGGAGGTAAGCAC | 60.0 | 0.22 |
| mm4_exon_Rcor1_chr12_111113697_F | TCGTCGGCAGCGTCGAGATGAGTCAGAGGCACGG | 59.8 | 0.21 |
| mm4_exon_Rcor1_chr12_111113697_R | GTCTCGTGGGCTCGGTTGCCTTCCCCTTCAGCTAC | 59.6 | 0.21 |
| mm4_intergenic_4631405K08Rik|Plxna2_chr1_194208832_F | TCGTCGGCAGCGTCTGGTCACCATTACAGGCACT | 58.9 | 0.21 |
| mm4_intergenic_4631405K08Rik|Plxna2_chr1_194208832_R | GTCTCGTGGGCTCGGAGCATTAGGCCCAGTGGTTC | 60.0 | 0.21 |
| mm4_intron_Abhd5_chr9_122355548_F | Primer3: not found at this Tm | N.d. | 0.21 |
| mm4_intron_Abhd5_chr9_122355548_R | Primer3: not found at this Tm | N.d. | 0.21 |
| mm4_intron_Igf2bp1_chr11_95968008_F | Primer3: not found at this Tm | N.d. | 0.21 |
| mm4_intron_Igf2bp1_chr11_95968008_R | Primer3: not found at this Tm | N.d. | 0.21 |
| mm4_intron_Gjb1_chrX_101383444_F | TCGTCGGCAGCGTCGCTGACCCCGTTTCTGGTAG | 60.3 | 0.21 |
| mm4_intron_Gjb1_chrX_101383444_R | GTCTCGTGGGCTCGGGCCCCACCAGAATAATGGCT | 60.1 | 0.21 |
| mm3_intergenic_Gm7931|Slit2_chr5_46825746_F | TCGTCGGCAGCGTCGCTTCAAGCAAGAGGTGTGC | 60.0 | 0.21 |
| mm3_intergenic_Gm7931|Slit2_chr5_46825746_R | GTCTCGTGGGCTCGGATTGCCCAGCTGAGAGTTCA | 59.3 | 0.21 |
| mm4_intergenic_Gm12435|Invs_chr4_48357827_F | TCGTCGGCAGCGTCTGAAAGACTGTCAGGTATTCCC | 57.4 | 0.20 |
| mm4_intergenic_Gm12435|Invs_chr4_48357827_R | GTCTCGTGGGCTCGGTGAAATTTACCAAGAAAGCATGCC | 58.7 | 0.20 |
| mm4_intergenic_Gm25779|Gm13173_chr4_153031202_F | Primer3: not found at this Tm | N.d. | 0.20 |
| mm4_intergenic_Gm25779|Gm13173_chr4_153031202_R | Primer3: not found at this Tm | N.d. | 0.20 |
| mm4_intron_Dscam_chr16_96680717_F | TCGTCGGCAGCGTCCGTCATATGACAGGCAGGGA | 59.2 | 0.20 |
| mm4_intron_Dscam_chr16_96680717_R | GTCTCGTGGGCTCGGGATGTGAAGCCTGCCTCCAT | 60.1 | 0.20 |
| mm4_intergenic_App|Cyyr1_chr16_85319769_F | TCGTCGGCAGCGTCGCCTAGAGCCCACAAAACCT | 59.9 | 0.20 |
| mm4_intergenic_App|Cyyr1_chr16_85319769_R | GTCTCGTGGGCTCGGTCTTCCTCTGTCTATGAAACGAA | 57.0 | 0.20 |
| mm4_intergenic_Gm11986|U7_chr11_7318432_F | Primer3: not found at this Tm | N.d. | 0.20 |
| mm4_intergenic_Gm11986|U7_chr11_7318432_R | Primer3: not found at this Tm | N.d. | 0.20 |
| mm4_intron_Sema4a_chr3_88454557_F | TCGTCGGCAGCGTCCACAGTGACCCTTCCTTCCC | 59.9 | 0.20 |
| mm4_intron_Sema4a_chr3_88454557_R | GTCTCGTGGGCTCGGGAGGAAGGAGAAGGGTGTGC | 60.0 | 0.20 |
| mm4_intron_Glb1l2_chr9_26794365_F | TCGTCGGCAGCGTCAGGGACATGGCCAAAGTTCA | 59.5 | 0.19 |
| mm4_intron_Glb1l2_chr9_26794365_R | GTCTCGTGGGCTCGGACTTCCAGTGGGTCTGCATG | 59.9 | 0.19 |
| mm4_intergenic_RP23-341H6.1|Lca5_chr9_83353864_F | Primer3: not found at this Tm | N.d. | 0.19 |
| mm4_intergenic_RP23-341H6.1|Lca5_chr9_83353864_R | Primer3: not found at this Tm | N.d. | 0.19 |
| mm4_intergenic_Ttc32|Gm7099_chr12_9167242_F | Primer3: not found at this Tm | N.d. | 0.18 |
| mm4_intergenic_Ttc32|Gm7099_chr12_9167242_R | Primer3: not found at this Tm | N.d. | 0.18 |
| mm4_intergenic_Gm26651|Diras2_chr13_52181980_F | Primer3: not found at this Tm | N.d. | 0.18 |
| mm4_intergenic_Gm26651|Diras2_chr13_52181980_R | Primer3: not found at this Tm | N.d. | 0.18 |
| mm4_intergenic_Gm26651|Diras2_chr13_52181972_F | Primer3: not found at this Tm | N.d. | 0.18 |
| mm4_intergenic_Gm26651|Diras2_chr13_52181972_R | Primer3: not found at this Tm | N.d. | 0.18 |
| mm4_intergenic_Gm26651|Diras2_chr13_52181964_F | Primer3: not found at this Tm | N.d. | 0.18 |
| mm4_intergenic_Gm26651|Diras2_chr13_52181964_R | Primer3: not found at this Tm | N.d. | 0.18 |
| mm4_intergenic_Gm26651|Diras2_chr13_52181956_F | Primer3: not found at this Tm | N.d. | 0.18 |
| mm4_intergenic_Gm26651|Diras2_chr13_52181956_R | Primer3: not found at this Tm | N.d. | 0.18 |
| mm4_intergenic_Gm26651|Diras2_chr13_52181948_F | Primer3: not found at this Tm | N.d. | 0.18 |
| mm4_intergenic_Gm26651|Diras2_chr13_52181948_R | Primer3: not found at this Tm | N.d. | 0.18 |
| mm4_intergenic_Gm26651|Diras2_chr13_52181940_F | Primer3: not found at this Tm | N.d. | 0.18 |
| mm4_intergenic_Gm26651|Diras2_chr13_52181940_R | Primer3: not found at this Tm | N.d. | 0.18 |
| mm4_intergenic_Gm26651|Diras2_chr13_52181876_F | Primer3: not found at this Tm | N.d. | 0.18 |
| mm4_intergenic_Gm26651|Diras2_chr13_52181876_R | Primer3: not found at this Tm | N.d. | 0.18 |
| mm4_intergenic_Slc22a22|Zhx2_chr15_57671549_F | Primer3: not found at this Tm | N.d. | 0.18 |
| mm4_intergenic_Slc22a22|Zhx2_chr15_57671549_R | Primer3: not found at this Tm | N.d. | 0.18 |
| mm4_intron_Sec16b_chr1_157556450_F | Primer3: not found at this Tm | N.d. | 0.18 |
| mm4_intron_Sec16b_chr1_157556450_R | Primer3: not found at this Tm | N.d. | 0.18 |
| mm4_intergenic_Gm13484|Gm13498_chr2_50854928_F | Primer3: not found at this Tm | N.d. | 0.18 |
| mm4_intergenic_Gm13484|Gm13498_chr2_50854928_R | Primer3: not found at this Tm | N.d. | 0.18 |
| mm4_intergenic_mmu-mir-6335|B3galt1_chr2_67787652_F | Primer3: not found at this Tm | N.d. | 0.18 |
| mm4_intergenic_mmu-mir-6335|B3galt1_chr2_67787652_R | Primer3: not found at this Tm | N.d. | 0.18 |
| mm4_intergenic_Kcnab2|Kcnab2/Gm16334_chr4_152416922_F | Primer3: not found at this Tm | N.d. | 0.18 |
| mm4_intergenic_Kcnab2|Kcnab2/Gm16334_chr4_152416922_R | Primer3: not found at this Tm | N.d. | 0.18 |
| mm4_intergenic_Gm12016|Etaa1_chr11_17938150_F | Primer3: not found at this Tm | N.d. | 0.17 |
| mm4_intergenic_Gm12016|Etaa1_chr11_17938150_R | Primer3: not found at this Tm | N.d. | 0.17 |
| mm4_intergenic_3830406C13Rik|Gm24578_chr14_12328754_F | Primer3: not found at this Tm | N.d. | 0.17 |
| mm4_intergenic_3830406C13Rik|Gm24578_chr14_12328754_R | Primer3: not found at this Tm | N.d. | 0.17 |
| mm3_exon_Slc38a1_chr15_96573913_F | TCGTCGGCAGCGTCGTGACCCGTGGCAGAGATG | 60.4 | 0.17 |
| mm3_exon_Slc38a1_chr15_96573913_R | GTCTCGTGGGCTCGGTGGAGTGACAGGACTGTGGA | 60.1 | 0.17 |
| mm4_intron_Src_chr2_157460871_F | Primer3: not found at this Tm | N.d. | 0.17 |
| mm4_intron_Src_chr2_157460871_R | Primer3: not found at this Tm | N.d. | 0.17 |
| mm4_intergenic_Actrt2|Gm13113_chr4_154830299_F | TCGTCGGCAGCGTCGATTTCCCCACTGCAGCTCT | 60.0 | 0.17 |
| mm4_intergenic_Actrt2|Gm13113_chr4_154830299_R | GTCTCGTGGGCTCGGGTTTGGGAGCTCAGGATGCA | 60.3 | 0.17 |
| mm4_intergenic_Gm17651|Pde4dip/mmu-mir-7225_chr3_97680297_F | Primer3: not found at this Tm | N.d. | 0.17 |
| mm4_intergenic_Gm17651|Pde4dip/mmu-mir-7225_chr3_97680297_R | Primer3: not found at this Tm | N.d. | 0.17 |
| mm4_intergenic_Mogat1|Acsl3/Utp14b_chr1_78635402_F | Primer3: not found at this Tm | N.d. | 0.17 |
| mm4_intergenic_Mogat1|Acsl3/Utp14b_chr1_78635402_R | Primer3: not found at this Tm | N.d. | 0.17 |
| mm4_exon_Kctd11_chr11_69878818_F | Primer3: not found at this Tm | N.d. | 0.16 |
| mm4_exon_Kctd11_chr11_69878818_R | Primer3: not found at this Tm | N.d. | 0.16 |
| mm4_intergenic_Mthfs|AF529169_chr9_89376594_F | TCGTCGGCAGCGTCGGTGACGTGAGGATAAGGCC | 60.1 | 0.16 |
| mm4_intergenic_Mthfs|AF529169_chr9_89376594_R | GTCTCGTGGGCTCGGATTTGACCACTCCCACACCC | 59.8 | 0.16 |
| mm4_intergenic_Gm17192|Gm24164_chr16_61622274_F | Primer3: not found at this Tm | N.d. | 0.16 |
| mm4_intergenic_Gm17192|Gm24164_chr16_61622274_R | Primer3: not found at this Tm | N.d. | 0.16 |
| mm4_intergenic_Gm16079|Gm13049_chr4_150689845_F | TCGTCGGCAGCGTCTCAAGGATGCCCTGGCTTTT | 59.8 | 0.16 |
| mm4_intergenic_Gm16079|Gm13049_chr4_150689845_R | GTCTCGTGGGCTCGGCTGGGAGGCTTTGGGAAGAG | 60.0 | 0.16 |
| mm4_intergenic_Gm22016|Cdc73_chr1_141584234_F | Primer3: not found at this Tm | N.d. | 0.16 |
| mm4_intergenic_Gm22016|Cdc73_chr1_141584234_R | Primer3: not found at this Tm | N.d. | 0.16 |
| mm4_intergenic_Igf2os|Ins2_chr7_142674947_F | TCGTCGGCAGCGTCCCTGCAGCAGAAGGGTGTTA | 59.9 | 0.16 |
| mm4_intergenic_Igf2os|Ins2_chr7_142674947_R | GTCTCGTGGGCTCGGCCTTGGAGTCACTGGCTCAC | 60.3 | 0.16 |
| mm4_intron_Mfng_chr15_78767027_F | TCGTCGGCAGCGTCTGACCTGACCAGACCCTCC | 60.2 | 0.15 |
| mm4_intron_Mfng_chr15_78767027_R | GTCTCGTGGGCTCGGCTCAGTTTCCCTGGGGAGG | 59.0 | 0.15 |
| mm4_intron_E030010N08Rik_chr1_93222419_F | Primer3: not found at this Tm | N.d. | 0.15 |
| mm4_intron_E030010N08Rik_chr1_93222419_R | Primer3: not found at this Tm | N.d. | 0.15 |
| mm4_intergenic_Gm8730|Cdh5_chr8_103499850_F | Primer3: not found at this Tm | N.d. | 0.15 |
| mm4_intergenic_Gm8730|Cdh5_chr8_103499850_R | Primer3: not found at this Tm | N.d. | 0.15 |
| mm3_intergenic_Tpbg|Ube2cbp_chr9_86160838_F | Primer3: not found at this Tm | N.d. | 0.15 |
| mm3_intergenic_Tpbg|Ube2cbp_chr9_86160838_R | Primer3: not found at this Tm | N.d. | 0.15 |
| mm4_intergenic_Rnf26|Mfrp_chr9_44100148_F | Primer3: not found at this Tm | N.d. | 0.15 |
| mm4_intergenic_Rnf26|Mfrp_chr9_44100148_R | Primer3: not found at this Tm | N.d. | 0.15 |
| mm3_intergenic_A430060F13Rik|Gm22456_chr11_94887217_F | Primer3: not found at this Tm | N.d. | 0.15 |
| mm3_intergenic_A430060F13Rik|Gm22456_chr11_94887217_R | Primer3: not found at this Tm | N.d. | 0.15 |
| mm4_exon_Sacs_chr14_61192292_F | Primer3: not found at this Tm | N.d. | 0.15 |
| mm4_exon_Sacs_chr14_61192292_R | Primer3: not found at this Tm | N.d. | 0.15 |
| mm3_intergenic_Ggnbp1|Itpr3_chr17_27039933_F | Primer3: not found at this Tm | N.d. | 0.15 |
| mm3_intergenic_Ggnbp1|Itpr3_chr17_27039933_R | Primer3: not found at this Tm | N.d. | 0.15 |
| mm4_intergenic_Kctd16|Rps19-ps13_chr18_40716308_F | Primer3: not found at this Tm | N.d. | 0.15 |
| mm4_intergenic_Kctd16|Rps19-ps13_chr18_40716308_R | Primer3: not found at this Tm | N.d. | 0.15 |
| mm4_intron_Ifltd1_chr6_145418625_F | TCGTCGGCAGCGTCTTCCCAGTTCCCAGCGTTC | 59.9 | 0.14 |
| mm4_intron_Ifltd1_chr6_145418625_R | GTCTCGTGGGCTCGGTGAGGGAACATGGTGAGCTG | 59.6 | 0.14 |
| mm4_intergenic_Gm6304|Kctd1_chr18_15027745_F | Primer3: not found at this Tm | N.d. | 0.14 |
| mm4_intergenic_Gm6304|Kctd1_chr18_15027745_R | Primer3: not found at this Tm | N.d. | 0.14 |
| mm4_intron_Prdm16_chr4_154429377_F | Primer3: not found at this Tm | N.d. | 0.14 |
| mm4_intron_Prdm16_chr4_154429377_R | Primer3: not found at this Tm | N.d. | 0.14 |
| mm4_intron_Phka1_chrX_102590850_F | Primer3: not found at this Tm | N.d. | 0.14 |
| mm4_intron_Phka1_chrX_102590850_R | Primer3: not found at this Tm | N.d. | 0.14 |
| mm4_intergenic_Bptf|Gm11715_chr11_107148790_F | TCGTCGGCAGCGTCACTTTCTCAGCCAGGAAGCT | 58.9 | 0.14 |
| mm4_intergenic_Bptf|Gm11715_chr11_107148790_R | GTCTCGTGGGCTCGGTCACATTAGTAATGCCAATAACTGC | 57.9 | 0.14 |
| mm4_intron_Catsperg2_chr7_29711556_F | TCGTCGGCAGCGTCGTGTGTGTTTGCAGGCACAT | 59.8 | 0.14 |
| mm4_intron_Catsperg2_chr7_29711556_R | GTCTCGTGGGCTCGGGACACCCAAGGGCTTGTTCT | 60.1 | 0.14 |
| mm4_intergenic_Gtse1|Trmu_chr15_85877196_F | TCGTCGGCAGCGTCCTGGAGTGGGGTCCTAGACA | 59.9 | 0.13 |
| mm4_intergenic_Gtse1|Trmu_chr15_85877196_R | GTCTCGTGGGCTCGGACTGGGGAAGAATCTGCTGC | 60.0 | 0.13 |
| mm4_intergenic_Rad51b|Zfp36l1/Gm26669_chr12_79845643_F | Primer3: not found at this Tm | N.d. | 0.13 |
| mm4_intergenic_Rad51b|Zfp36l1/Gm26669_chr12_79845643_R | Primer3: not found at this Tm | N.d. | 0.13 |
| mm4_intergenic_Gm22914|Skap2_chr6_51776766_F | Primer3: not found at this Tm | N.d. | 0.13 |
| mm4_intergenic_Gm22914|Skap2_chr6_51776766_R | Primer3: not found at this Tm | N.d. | 0.13 |
| mm4_intergenic_Msra|A930011O12Rik_chr14_64533344_F | TCGTCGGCAGCGTCCCTACCAGAGTTCACAGGGC | 59.7 | 0.13 |
| mm4_intergenic_Msra|A930011O12Rik_chr14_64533344_R | GTCTCGTGGGCTCGGATAGGGCCTGGTCAGTGTCC | 60.9 | 0.13 |
| mm3_intergenic_Rasip1/Gm16047|Rasip1_chr7_45634478_F | Primer3: not found at this Tm | N.d. | 0.13 |
| mm3_intergenic_Rasip1/Gm16047|Rasip1_chr7_45634478_R | Primer3: not found at this Tm | N.d. | 0.13 |
| mm3_intergenic_Gm25010|Unc13b_chr4_43207368_F | Primer3: not found at this Tm | N.d. | 0.13 |
| mm3_intergenic_Gm25010|Unc13b_chr4_43207368_R | Primer3: not found at this Tm | N.d. | 0.13 |
| mm3_intron_Npepps_chr11_97229092_F | TCGTCGGCAGCGTCGGCACAGCTGGATGATGACT | 60.1 | 0.13 |
| mm3_intron_Npepps_chr11_97229092_R | GTCTCGTGGGCTCGGCTGCTCCAGTGTGAGTCCAG | 60.0 | 0.13 |
| mm4_intergenic_4930594M17Rik|Gm26012_chr18_81944173_F | TCGTCGGCAGCGTCGATTCGAGAGACACAGCCCC | 60.1 | 0.13 |
| mm4_intergenic_4930594M17Rik|Gm26012_chr18_81944173_R | GTCTCGTGGGCTCGGGCCACCTTCGTGCTGATAGA | 59.8 | 0.13 |
| mm4_exon_Gm15808_chr16_14067984_F | TCGTCGGCAGCGTCATTCCAACCCCACTGTGCAA | 60.1 | 0.13 |
| mm4_exon_Gm15808_chr16_14067984_R | GTCTCGTGGGCTCGGTGGAATCGCGGTCTGTAACC | 60.1 | 0.13 |
| mm4_intron_Ergic1_chr17_26632650_F | Primer3: not found at this Tm | N.d. | 0.13 |
| mm4_intron_Ergic1_chr17_26632650_R | Primer3: not found at this Tm | N.d. | 0.13 |
| mm4_intron_Pold2_chr11_5877232_F | TCGTCGGCAGCGTCCCCAATCACCAGGGTCTCAA | 59.3 | 0.13 |
| mm4_intron_Pold2_chr11_5877232_R | GTCTCGTGGGCTCGGGACAGGCTTCTTCAGTGATGC | 59.2 | 0.13 |
| mm4_intron_Tle4_chr19_14525468_F | TCGTCGGCAGCGTCACAGCGAACTTCTCAAACACT | 58.0 | 0.13 |
| mm4_intron_Tle4_chr19_14525468_R | GTCTCGTGGGCTCGGCCGAGTCCCACACACCTTTT | 60.1 | 0.13 |
| mm4_intron_Gpr132_chr12_112853937_F | TCGTCGGCAGCGTCTTCCATGGCTCTGGTTGTCC | 59.9 | 0.13 |
| mm4_intron_Gpr132_chr12_112853937_R | GTCTCGTGGGCTCGGTAGTGCGGTTCTTAGCTGGC | 60.1 | 0.13 |
| mm4_exon_Gnas_chr2_174327819_F | TCGTCGGCAGCGTCCTTCAGGTGGCTGGTACCAG | 60.0 | 0.13 |
| mm4_exon_Gnas_chr2_174327819_R | GTCTCGTGGGCTCGGGGACAAGGGTTCGCTCCAG | 60.3 | 0.13 |
| mm4_intron_Sema6d_chr2_124644781_F | TCGTCGGCAGCGTCGCCTGTGTGCAGAATAGGCT | 60.3 | 0.13 |
| mm4_intron_Sema6d_chr2_124644781_R | GTCTCGTGGGCTCGGGGGGAGGATGTTTGGGTGTC | 60.3 | 0.13 |
| mm4_intergenic_Calb2|Cmtr2_chr8_110192908_F | Primer3: not found at this Tm | N.d. | 0.13 |
| mm4_intergenic_Calb2|Cmtr2_chr8_110192908_R | Primer3: not found at this Tm | N.d. | 0.13 |
| mm4_intron_Numbl_chr7_27268281_F | Primer3: not found at this Tm | N.d. | 0.13 |
| mm4_intron_Numbl_chr7_27268281_R | Primer3: not found at this Tm | N.d. | 0.13 |
| mm4_intergenic_Rdh9|RP23-386P10.11/Rdh9_chr10_127783556_F | Primer3: not found at this Tm | N.d. | 0.12 |
| mm4_intergenic_Rdh9|RP23-386P10.11/Rdh9_chr10_127783556_R | Primer3: not found at this Tm | N.d. | 0.12 |
| mm4_intron_Il24_chr1_130884210_F | TCGTCGGCAGCGTCCCCAAAGCAACTCAGCCAAC | 59.9 | 0.12 |
| mm4_intron_Il24_chr1_130884210_R | GTCTCGTGGGCTCGGAGACTTCTTATCACCTGGGTGG | 59.1 | 0.12 |
| mm4_intron_9930013L23Rik_chr7_83979761_F | Primer3: not found at this Tm | N.d. | 0.12 |
| mm4_intron_9930013L23Rik_chr7_83979761_R | Primer3: not found at this Tm | N.d. | 0.12 |
| mm3_intron_Abca4_chr3_122139956_F | TCGTCGGCAGCGTCGTCCTGGGTCAATCCTGCTC | 60.1 | 0.12 |
| mm3_intron_Abca4_chr3_122139956_R | GTCTCGTGGGCTCGGTGTGCATGGAGGTCTGATGG | 59.7 | 0.12 |
| mm4_intergenic_Sgms2|Papss1_chr3_131355908_F | TCGTCGGCAGCGTCGGCTGAGAAAGGTGAGGTCC | 60.0 | 0.12 |
| mm4_intergenic_Sgms2|Papss1_chr3_131355908_R | GTCTCGTGGGCTCGGGTGGCAGAAATGGCAGTGTG | 60.0 | 0.12 |
| mm4_intron_Cntnap5a_chr1_115883348_F | TCGTCGGCAGCGTCAGAGGGGTGTGAGGTTGTCA | 60.4 | 0.12 |
| mm4_intron_Cntnap5a_chr1_115883348_R | GTCTCGTGGGCTCGGTCAGCATAGGGAGCATGCTG | 59.8 | 0.12 |
| mm4_intron_Dirc2_chr16_35718006_F | Primer3: not found at this Tm | N.d. | 0.11 |
| mm4_intron_Dirc2_chr16_35718006_R | Primer3: not found at this Tm | N.d. | 0.11 |
| mm4_intergenic_Btg1|Gm24587_chr10_96716170_F | Primer3: not found at this Tm | N.d. | 0.11 |
| mm4_intergenic_Btg1|Gm24587_chr10_96716170_R | Primer3: not found at this Tm | N.d. | 0.11 |
| mm4_intron_Ccdc178_chr18_21828885_F | Primer3: not found at this Tm | N.d. | 0.11 |
| mm4_intron_Ccdc178_chr18_21828885_R | Primer3: not found at this Tm | N.d. | 0.11 |
| mm4_intron_Gm2420_chr5_32724411_F | TCGTCGGCAGCGTCAACCTCTCAAGCAAGAGCCC | 59.9 | 0.11 |
| mm4_intron_Gm2420_chr5_32724411_R | GTCTCGTGGGCTCGGTGCCCTGGGAGGTCCTTATT | 60.2 | 0.11 |
| mm4_exon_Lin28a_chr4_134007909_F | Primer3: not found at this Tm | N.d. | 0.11 |
| mm4_exon_Lin28a_chr4_134007909_R | Primer3: not found at this Tm | N.d. | 0.11 |
| mm4_intergenic_Myl3|Prss42_chr9_110781437_F | Primer3: not found at this Tm | N.d. | 0.11 |
| mm4_intergenic_Myl3|Prss42_chr9_110781437_R | Primer3: not found at this Tm | N.d. | 0.11 |
| mm4_intron_Zfp697_chr3_98390166_F | Primer3: not found at this Tm | N.d. | 0.11 |
| mm4_intron_Zfp697_chr3_98390166_R | Primer3: not found at this Tm | N.d. | 0.11 |
| mm3_intron_Rps6ka1_chr4_133864542_F | Primer3: not found at this Tm | N.d. | 0.11 |
| mm3_intron_Rps6ka1_chr4_133864542_R | Primer3: not found at this Tm | N.d. | 0.11 |
| mm4_intron_Ctdspl_chr9_118948114_F | Primer3: not found at this Tm | N.d. | 0.11 |
| mm4_intron_Ctdspl_chr9_118948114_R | Primer3: not found at this Tm | N.d. | 0.11 |
| mm4_intron_C1galt1_chr6_7856663_F | Primer3: not found at this Tm | N.d. | 0.11 |
| mm4_intron_C1galt1_chr6_7856663_R | Primer3: not found at this Tm | N.d. | 0.11 |
| mm4_intron_Cda_chr4_138359808_F | TCGTCGGCAGCGTCCCCTGCGTCAGTGAATCCTT | 60.0 | 0.11 |
| mm4_intron_Cda_chr4_138359808_R | GTCTCGTGGGCTCGGTGGAACAGGTCTGCATGCG | 60.6 | 0.11 |
| mm4_intergenic_Gm23452|Gm23900_chr2_81456865_F | Primer3: not found at this Tm | N.d. | 0.11 |
| mm4_intergenic_Gm23452|Gm23900_chr2_81456865_R | Primer3: not found at this Tm | N.d. | 0.11 |
| mm4_intergenic_Gm11846|n-R5s182_chr4_12523976_F | TCGTCGGCAGCGTCTCCTGTGGTGTCTCAGAGGT | 59.8 | 0.10 |
| mm4_intergenic_Gm11846|n-R5s182_chr4_12523976_R | GTCTCGTGGGCTCGGAGGGACATGCTCATCCTCCT | 60.0 | 0.10 |
| mm4_intron_Dmxl1_chr18_49943689_F | Primer3: not found at this Tm | N.d. | 0.10 |
| mm4_intron_Dmxl1_chr18_49943689_R | Primer3: not found at this Tm | N.d. | 0.10 |
| mm3_intergenic_Lca5l|Sh3bgr_chr16_96195163_F | TCGTCGGCAGCGTCCGTCCAGATCAAAGGATGGT | 57.3 | 0.10 |
| mm3_intergenic_Lca5l|Sh3bgr_chr16_96195163_R | GTCTCGTGGGCTCGGACCGTCTCTAAATATGACGATTGT | 57.8 | 0.10 |
| mm4_intergenic_Rbpsuh-rs3|Cntnap2_chr6_46603540_F | Primer3: not found at this Tm | N.d. | 0.10 |
| mm4_intergenic_Rbpsuh-rs3|Cntnap2_chr6_46603540_R | Primer3: not found at this Tm | N.d. | 0.10 |
| mm4_intergenic_Gm26563/Suz12|Suz12_chr11_80023586_F | Primer3: not found at this Tm | N.d. | 0.09 |
| mm4_intergenic_Gm26563/Suz12|Suz12_chr11_80023586_R | Primer3: not found at this Tm | N.d. | 0.09 |
| mm4_intergenic_Adhfe1|2610203C22Rik/3110035E14Rik_chr1_9594586_F | Primer3: not found at this Tm | N.d. | 0.09 |
| mm4_intergenic_Adhfe1|2610203C22Rik/3110035E14Rik_chr1_9594586_R | Primer3: not found at this Tm | N.d. | 0.09 |
| mm4_exon_Car4_chr11_84957768_F | TCGTCGGCAGCGTCCTGGACAAGGCGAAGAGAGG | 60.1 | 0.09 |
| mm4_exon_Car4_chr11_84957768_R | GTCTCGTGGGCTCGGGATCATGCTGGTGGAGGCTT | 60.1 | 0.09 |
| mm4_intergenic_Gm13018|Prdm2_chr4_142956560_F | TCGTCGGCAGCGTCTGTGCTCACAATCCATGGGA | 59.3 | 0.09 |
| mm4_intergenic_Gm13018|Prdm2_chr4_142956560_R | GTCTCGTGGGCTCGGCCAGAGAGGTGCACAGACTG | 60.0 | 0.09 |
| mm4_intergenic_Slco1a6|Slco1a5_chr6_142220103_F | TCGTCGGCAGCGTCAAGTCACCTCCTGAACCCTT | 58.1 | 0.09 |
| mm4_intergenic_Slco1a6|Slco1a5_chr6_142220103_R | GTCTCGTGGGCTCGGACAAACTTGAGCCTTCTAATCCT | 57.7 | 0.09 |
| mm4_intergenic_Gm26544|Gpr88_chr3_116201135_F | TCGTCGGCAGCGTCGAAGGCGAACACCAAAACCC | 59.9 | 0.09 |
| mm4_intergenic_Gm26544|Gpr88_chr3_116201135_R | GTCTCGTGGGCTCGGGGTCCTAGCAAGAGCACCAG | 60.1 | 0.09 |
| mm4_intron_Mrc2_chr11_105339412_F | TCGTCGGCAGCGTCATGGAGGCTCTGAGGACTGT | 59.9 | 0.08 |
| mm4_intron_Mrc2_chr11_105339412_R | GTCTCGTGGGCTCGGCTTGACCGCTGGGAGGAAAT | 60.0 | 0.08 |
| mm4_intergenic_Col5a2|Gm23216_chr1_45664604_F | Primer3: not found at this Tm | N.d. | 0.08 |
| mm4_intergenic_Col5a2|Gm23216_chr1_45664604_R | Primer3: not found at this Tm | N.d. | 0.08 |
| mm4_intergenic_Wdr26|A430110L20Rik_chr1_181215255_F | Primer3: not found at this Tm | N.d. | 0.08 |
| mm4_intergenic_Wdr26|A430110L20Rik_chr1_181215255_R | Primer3: not found at this Tm | N.d. | 0.08 |
| mm4_intergenic_Gm15794|Nsun7_chr5_66227618_F | Primer3: not found at this Tm | N.d. | 0.08 |
| mm4_intergenic_Gm15794|Nsun7_chr5_66227618_R | Primer3: not found at this Tm | N.d. | 0.08 |
| mm4_intergenic_Gm24692|Sptssa_chr12_54335625_F | Primer3: not found at this Tm | N.d. | 0.08 |
| mm4_intergenic_Gm24692|Sptssa_chr12_54335625_R | Primer3: not found at this Tm | N.d. | 0.08 |
| mm4_intron_Kmt2d_chr15_98847519_F | Primer3: not found at this Tm | N.d. | 0.08 |
| mm4_intron_Kmt2d_chr15_98847519_R | Primer3: not found at this Tm | N.d. | 0.08 |
| mm3_intergenic_Foxf2|Gm25186_chr13_31642691_F | TCGTCGGCAGCGTCCAACCACTTCCCTGGGATCC | 60.0 | 0.08 |
| mm3_intergenic_Foxf2|Gm25186_chr13_31642691_R | GTCTCGTGGGCTCGGGGCTGAGTAGAGTCACAGGC | 59.8 | 0.08 |
| mm4_intron_Atp4b_chr8_13394201_F | Primer3: not found at this Tm | N.d. | 0.08 |
| mm4_intron_Atp4b_chr8_13394201_R | Primer3: not found at this Tm | N.d. | 0.08 |
| mm4_intergenic_Shank2|Gm14372_chr7_144321024_F | TCGTCGGCAGCGTCACAGCACTTCTGCATGGGAA | 59.8 | 0.08 |
| mm4_intergenic_Shank2|Gm14372_chr7_144321024_R | GTCTCGTGGGCTCGGATGTTGCCTGTCTGACAGCA | 59.8 | 0.08 |
| mm4_intergenic_C230029F24Rik|PCGEM1_chr1_49741228_F | Primer3: not found at this Tm | N.d. | 0.08 |
| mm4_intergenic_C230029F24Rik|PCGEM1_chr1_49741228_R | Primer3: not found at this Tm | N.d. | 0.08 |
| mm4_intergenic_Gm12701|Ror1_chr4_100180438_F | Primer3: not found at this Tm | N.d. | 0.07 |
| mm4_intergenic_Gm12701|Ror1_chr4_100180438_R | Primer3: not found at this Tm | N.d. | 0.07 |
| mm4_intron_Camkmt_chr17_85309282_F | TCGTCGGCAGCGTCTTCGACAAGGCTGGCAAGAA | 60.1 | 0.07 |
| mm4_intron_Camkmt_chr17_85309282_R | GTCTCGTGGGCTCGGGCCACAAGTTCATGAAGTGTCA | 59.3 | 0.07 |
| mm4_intergenic_B230112J18Rik|4930562A09Rik_chr5_116360709_F | Primer3: not found at this Tm | N.d. | 0.07 |
| mm4_intergenic_B230112J18Rik|4930562A09Rik_chr5_116360709_R | Primer3: not found at this Tm | N.d. | 0.07 |
| mm4_intron_Pde11a_chr2_76081554_F | Primer3: not found at this Tm | N.d. | 0.07 |
| mm4_intron_Pde11a_chr2_76081554_R | Primer3: not found at this Tm | N.d. | 0.07 |
| mm4_intron_Fam129b_chr2_32905038_F | Primer3: not found at this Tm | N.d. | 0.07 |
| mm4_intron_Fam129b_chr2_32905038_R | Primer3: not found at this Tm | N.d. | 0.07 |
| mm4_intergenic_Onecut2|Amd-ps3_chr18_64420801_F | TCGTCGGCAGCGTCTGCAATGACCTACACAGAACCA | 59.8 | 0.07 |
| mm4_intergenic_Onecut2|Amd-ps3_chr18_64420801_R | GTCTCGTGGGCTCGGTCAACCACACACCTTTGAGTCA | 60.0 | 0.07 |
| mm4_intergenic_Gm23459|Gm24634_chr14_106511121_F | TCGTCGGCAGCGTCAAGAGGGAGAGTTGTGTAGGT | 57.7 | 0.07 |
| mm4_intergenic_Gm23459|Gm24634_chr14_106511121_R | GTCTCGTGGGCTCGGACCTACCCACTATCAAGAAACACT | 59.1 | 0.07 |
| mm3_intergenic_Gm26546|Gnptab_chr10_88393918_F | TCGTCGGCAGCGTCTAGAGTGCACTTGGTGAGCC | 59.6 | 0.07 |
| mm3_intergenic_Gm26546|Gnptab_chr10_88393918_R | GTCTCGTGGGCTCGGTCTAAAGGTTTTGAGAAGGCTGC | 59.1 | 0.07 |
| mm3_intergenic_Gm6964|Gm14761_chrX_85799357_F | Primer3: not found at this Tm | N.d. | 0.06 |
| mm3_intergenic_Gm6964|Gm14761_chrX_85799357_R | Primer3: not found at this Tm | N.d. | 0.06 |
| mm4_intergenic_Gm15387|Bai1_chr15_74318838_F | TCGTCGGCAGCGTCAAACACTTCCTCCTCGCCTG | 59.9 | 0.06 |
| mm4_intergenic_Gm15387|Bai1_chr15_74318838_R | GTCTCGTGGGCTCGGGCCCTGATTCATTGGCCAGA | 60.3 | 0.06 |
| mm4_intergenic_Gm10309|Prkce_chr17_86532169_F | Primer3: not found at this Tm | N.d. | 0.06 |
| mm4_intergenic_Gm10309|Prkce_chr17_86532169_R | Primer3: not found at this Tm | N.d. | 0.06 |
| mm4_intergenic_Cntn5|Gm25365_chr9_12406329_F | Primer3: not found at this Tm | N.d. | 0.06 |
| mm4_intergenic_Cntn5|Gm25365_chr9_12406329_R | Primer3: not found at this Tm | N.d. | 0.06 |
| mm4_intergenic_Bpgm|Gm13860_chr6_34527167_F | TCGTCGGCAGCGTCAAGCCCAGCATCACTCCTTC | 60.0 | 0.06 |
| mm4_intergenic_Bpgm|Gm13860_chr6_34527167_R | GTCTCGTGGGCTCGGAGCCTGAGACCTGGAACTCA | 60.1 | 0.06 |
| mm4_intergenic_Gm833|Gm25779_chr4_152917176_F | Primer3: not found at this Tm | N.d. | 0.06 |
| mm4_intergenic_Gm833|Gm25779_chr4_152917176_R | Primer3: not found at this Tm | N.d. | 0.06 |
| mm4_intergenic_Gm15426|Pde10a_chr17_8801522_F | Primer3: not found at this Tm | N.d. | 0.06 |
| mm4_intergenic_Gm15426|Pde10a_chr17_8801522_R | Primer3: not found at this Tm | N.d. | 0.06 |
| mm4_intron_Cacna1b_chr2_24744601_F | Primer3: not found at this Tm | N.d. | 0.06 |
| mm4_intron_Cacna1b_chr2_24744601_R | Primer3: not found at this Tm | N.d. | 0.06 |
| mm4_intron_Frem2_chr3_53638512_F | Primer3: not found at this Tm | N.d. | 0.06 |
| mm4_intron_Frem2_chr3_53638512_R | Primer3: not found at this Tm | N.d. | 0.06 |
| mm4_intron_Dnhd1_chr7_105660348_F | Primer3: not found at this Tm | N.d. | 0.06 |
| mm4_intron_Dnhd1_chr7_105660348_R | Primer3: not found at this Tm | N.d. | 0.06 |
| mm4_intergenic_Stx11|Sf3b5_chr10_12988688_F | Primer3: not found at this Tm | N.d. | 0.06 |
| mm4_intergenic_Stx11|Sf3b5_chr10_12988688_R | Primer3: not found at this Tm | N.d. | 0.06 |
| mm3_intron_Lgr6_chr1_135009503_F | Primer3: not found at this Tm | N.d. | 0.06 |
| mm3_intron_Lgr6_chr1_135009503_R | Primer3: not found at this Tm | N.d. | 0.06 |
| mm4_intergenic_Tex29|A230072I06Rik_chr8_12034979_F | Primer3: not found at this Tm | N.d. | 0.06 |
| mm4_intergenic_Tex29|A230072I06Rik_chr8_12034979_R | Primer3: not found at this Tm | N.d. | 0.06 |
| mm4_intergenic_A130030D18Rik|Gm13675_chr2_82500624_F | Primer3: not found at this Tm | N.d. | 0.06 |
| mm4_intergenic_A130030D18Rik|Gm13675_chr2_82500624_R | Primer3: not found at this Tm | N.d. | 0.06 |
| mm4_intergenic_Sirpb1b|Sirpb1c_chr3_15606907_F | Primer3: not found at this Tm | N.d. | 0.06 |
| mm4_intergenic_Sirpb1b|Sirpb1c_chr3_15606907_R | Primer3: not found at this Tm | N.d. | 0.06 |
| mm4_intron_Grin2a_chr16_9740188_F | Primer3: not found at this Tm | N.d. | 0.06 |
| mm4_intron_Grin2a_chr16_9740188_R | Primer3: not found at this Tm | N.d. | 0.06 |
| mm4_intergenic_Gm11531|Gm11529_chr11_96421280_F | TCGTCGGCAGCGTCTGGAATGTGAGCTCTGAAATGC | 59.2 | 0.06 |
| mm4_intergenic_Gm11531|Gm11529_chr11_96421280_R | GTCTCGTGGGCTCGGTGTCACTGCTTCATGGTCATCA | 59.9 | 0.06 |
| mm4_intergenic_4933406G16Rik|Gm12025_chr11_19076382_F | TCGTCGGCAGCGTCACCTTTTGTTGTAAGGGTCTAAGT | 57.9 | 0.06 |
| mm4_intergenic_4933406G16Rik|Gm12025_chr11_19076382_R | GTCTCGTGGGCTCGGGCCTGCCCTCCTCTCTCTT | 60.6 | 0.06 |
| mm4_intergenic_Actr3b|Gm21655_chr5_25902100_F | TCGTCGGCAGCGTCCACTCAGGTGATAGCCAGTGT | 59.4 | 0.06 |
| mm4_intergenic_Actr3b|Gm21655_chr5_25902100_R | GTCTCGTGGGCTCGGCCTCCACACAGGTTGTCACA | 59.8 | 0.06 |
| mm4_intron_Tg_chr15_66676036_F | TCGTCGGCAGCGTCTGTGGTCAAGAAGCCAGTCT | 58.8 | 0.06 |
| mm4_intron_Tg_chr15_66676036_R | GTCTCGTGGGCTCGGAAGGCTATGGGGCAGGATTG | 59.8 | 0.06 |
| mm4_intergenic_Gm14982|Gm26209_chrX_130710350_F | Primer3: not found at this Tm | N.d. | 0.06 |
| mm4_intergenic_Gm14982|Gm26209_chrX_130710350_R | Primer3: not found at this Tm | N.d. | 0.06 |
| mm4_intergenic_Gm22845|Nt5c1b_chr12_10164649_F | Primer3: not found at this Tm | N.d. | 0.06 |
| mm4_intergenic_Gm22845|Nt5c1b_chr12_10164649_R | Primer3: not found at this Tm | N.d. | 0.06 |
| mm4_intron_Gm15414_chr7_96619795_F | Primer3: not found at this Tm | N.d. | 0.05 |
| mm4_intron_Gm15414_chr7_96619795_R | Primer3: not found at this Tm | N.d. | 0.05 |
| mm4_intergenic_Grid1|Mir346_chr14_34844498_F | TCGTCGGCAGCGTCGCAGGGTTGTGTGTCAGGAT | 60.2 | 0.05 |
| mm4_intergenic_Grid1|Mir346_chr14_34844498_R | GTCTCGTGGGCTCGGGGAGGCATCCGCAGTCATAA | 59.8 | 0.05 |
| mm4_intergenic_Fcamr|Gm15848_chr1_130805843_F | Primer3: not found at this Tm | N.d. | 0.05 |
| mm4_intergenic_Fcamr|Gm15848_chr1_130805843_R | Primer3: not found at this Tm | N.d. | 0.05 |
| mm4_intergenic_Gm12210|Gm11187_chr11_52504209_F | Primer3: not found at this Tm | N.d. | 0.05 |
| mm4_intergenic_Gm12210|Gm11187_chr11_52504209_R | Primer3: not found at this Tm | N.d. | 0.05 |
| mm4_intergenic_2410088K16Rik|Sh3bp4_chr1_88906313_F | TCGTCGGCAGCGTCGCCAAGGCACATCAGGAGAA | 60.3 | 0.05 |
| mm4_intergenic_2410088K16Rik|Sh3bp4_chr1_88906313_R | GTCTCGTGGGCTCGGGCTCCCTCCTCAGCCTACAT | 60.7 | 0.05 |
| mm4_intron_Vps13d_chr4_145009529_F | Primer3: not found at this Tm | N.d. | 0.05 |
| mm4_intron_Vps13d_chr4_145009529_R | Primer3: not found at this Tm | N.d. | 0.05 |
| mm4_intergenic_Trpm2/Gm22394|Gm22871/Trpm2_chr10_77913599_F | TCGTCGGCAGCGTCAAGCAGTCCACATCTGAGCC | 60.0 | 0.05 |
| mm4_intergenic_Trpm2/Gm22394|Gm22871/Trpm2_chr10_77913599_R | GTCTCGTGGGCTCGGCTTTGAAGCTCCCTCCCTGG | 60.0 | 0.05 |
| mm4_intergenic_Gm3756|Arhgap32_chr9_31972780_F | Primer3: not found at this Tm | N.d. | 0.05 |
| mm4_intergenic_Gm3756|Arhgap32_chr9_31972780_R | Primer3: not found at this Tm | N.d. | 0.05 |
| mm4_intergenic_Gm8802|Gm22196_chr5_7884408_F | Primer3: not found at this Tm | N.d. | 0.05 |
| mm4_intergenic_Gm8802|Gm22196_chr5_7884408_R | Primer3: not found at this Tm | N.d. | 0.05 |
| mm4_intergenic_Purg|5930422O12Rik_chr8_33423206_F | Primer3: not found at this Tm | N.d. | 0.05 |
| mm4_intergenic_Purg|5930422O12Rik_chr8_33423206_R | Primer3: not found at this Tm | N.d. | 0.05 |
| mm4_intergenic_Gm13211|Gm13254_chr2_7841043_F | Primer3: not found at this Tm | N.d. | 0.05 |
| mm4_intergenic_Gm13211|Gm13254_chr2_7841043_R | Primer3: not found at this Tm | N.d. | 0.05 |
| mm3_intron_Kctd20_chr17_28959366_F | Primer3: not found at this Tm | N.d. | 0.05 |
| mm3_intron_Kctd20_chr17_28959366_R | Primer3: not found at this Tm | N.d. | 0.05 |
| mm4_intron_Nat10_chr2_103741056_F | Primer3: not found at this Tm | N.d. | 0.05 |
| mm4_intron_Nat10_chr2_103741056_R | Primer3: not found at this Tm | N.d. | 0.05 |
| mm4_intron_1700025C18Rik_chr2_165089748_F | TCGTCGGCAGCGTCGGGGAGAGATGCAAAGTGCT | 60.0 | 0.05 |
| mm4_intron_1700025C18Rik_chr2_165089748_R | GTCTCGTGGGCTCGGCAAATCCTCCCCACATCCCC | 60.1 | 0.05 |
| mm4_intron_Smyd3_chr1_179027013_F | TCGTCGGCAGCGTCAAACCCTCGACCAAGCAGAG | 59.9 | 0.05 |
| mm4_intron_Smyd3_chr1_179027013_R | GTCTCGTGGGCTCGGAAACTCTGACTGCTTGGGCC | 60.5 | 0.05 |
| mm4_intron_Tenm2_chr11_37002810_F | Primer3: not found at this Tm | N.d. | 0.04 |
| mm4_intron_Tenm2_chr11_37002810_R | Primer3: not found at this Tm | N.d. | 0.04 |
| mm4_intron_Ror2_chr13_53131465_F | TCGTCGGCAGCGTCCAGGTGGGTCCTAGGCTTTG | 60.0 | 0.04 |
| mm4_intron_Ror2_chr13_53131465_R | GTCTCGTGGGCTCGGGGATGTTCCCAGCAAGACGA | 60.0 | 0.04 |
| mm4_intergenic_Tubb2a|Tubb2b_chr13_34114040_F | Primer3: not found at this Tm | N.d. | 0.04 |
| mm4_intergenic_Tubb2a|Tubb2b_chr13_34114040_R | Primer3: not found at this Tm | N.d. | 0.04 |
| mm3_intron_Fan1_chr7_64351143_F | TCGTCGGCAGCGTCTGGTCATCTTTCCGCCTTCC | 60.0 | 0.04 |
| mm3_intron_Fan1_chr7_64351143_R | GTCTCGTGGGCTCGGCCAGTGTGCCAGCATTTGAC | 60.0 | 0.04 |
| mm4_intergenic_E230016M11Rik|A430010J10Rik_chr6_67090331_F | TCGTCGGCAGCGTCTGAGCCCAGACTACAGTCCT | 59.5 | 0.04 |
| mm4_intergenic_E230016M11Rik|A430010J10Rik_chr6_67090331_R | GTCTCGTGGGCTCGGGCAGTGCTCAGGTGTCTTCT | 59.9 | 0.04 |
| mm4_intron_Reln_chr5_21962080_F | Primer3: not found at this Tm | N.d. | 0.04 |
| mm4_intron_Reln_chr5_21962080_R | Primer3: not found at this Tm | N.d. | 0.04 |
| mm4_intron_Hpse2_chr19_42856038_F | Primer3: not found at this Tm | N.d. | 0.04 |
| mm4_intron_Hpse2_chr19_42856038_R | Primer3: not found at this Tm | N.d. | 0.04 |
| mm4_intron_Ccdc41_chr10_94761465_F | Primer3: not found at this Tm | N.d. | 0.04 |
| mm4_intron_Ccdc41_chr10_94761465_R | Primer3: not found at this Tm | N.d. | 0.04 |
| mm4_intergenic_Mageb16-ps1|Trpc5_chrX_144580636_F | Primer3: not found at this Tm | N.d. | 0.04 |
| mm4_intergenic_Mageb16-ps1|Trpc5_chrX_144580636_R | Primer3: not found at this Tm | N.d. | 0.04 |
| mm4_intergenic_Ighv7-3|Ighv14-4_chr12_114172630_F | Primer3: not found at this Tm | N.d. | 0.04 |
| mm4_intergenic_Ighv7-3|Ighv14-4_chr12_114172630_R | Primer3: not found at this Tm | N.d. | 0.04 |
| mm4_intergenic_Ccng1|Gm24446_chr11_40830330_F | Primer3: not found at this Tm | N.d. | 0.04 |
| mm4_intergenic_Ccng1|Gm24446_chr11_40830330_R | Primer3: not found at this Tm | N.d. | 0.04 |
| mm4_intron_Zfp444_chr7_6182860_F | Primer3: not found at this Tm | N.d. | 0.04 |
| mm4_intron_Zfp444_chr7_6182860_R | Primer3: not found at this Tm | N.d. | 0.04 |
| mm4_intron_Fras1_chr5_96717519_F | TCGTCGGCAGCGTCTGCAGAAGGTAGGCATGAGC | 60.1 | 0.04 |
| mm4_intron_Fras1_chr5_96717519_R | GTCTCGTGGGCTCGGCCATGGGGAGAGGATGGTCT | 60.4 | 0.04 |
| mm4_intergenic_Rasgef1a|Csgalnact2_chr6_118106530_F | Primer3: not found at this Tm | N.d. | 0.04 |
| mm4_intergenic_Rasgef1a|Csgalnact2_chr6_118106530_R | Primer3: not found at this Tm | N.d. | 0.04 |
| mm4_intergenic_Gm9621|Gm24200_chr9_94132827_F | TCGTCGGCAGCGTCTGTTTCTGAGTGCTACATGATAGGA | 59.5 | 0.04 |
| mm4_intergenic_Gm9621|Gm24200_chr9_94132827_R | GTCTCGTGGGCTCGGAGGACCTCACTCCTGGACAT | 59.5 | 0.04 |
| mm3_intergenic_RP24-86O15.2|Gm10698_chr9_33212766_F | TCGTCGGCAGCGTCGGGAACTTGTGCAGGAACCA | 60.4 | 0.04 |
| mm3_intergenic_RP24-86O15.2|Gm10698_chr9_33212766_R | GTCTCGTGGGCTCGGAAGCTCAGGGACTCTCTTGA | 57.6 | 0.04 |
| mm4_intron_Hivep3_chr4_119873734_F | TCGTCGGCAGCGTCACCACACAGCTCTTCACTAGC | 59.9 | 0.04 |
| mm4_intron_Hivep3_chr4_119873734_R | GTCTCGTGGGCTCGGTGGGTCTTCCTGAAGGTGGA | 60.1 | 0.04 |
| mm4_intron_Sgce_chr6_4733581_F | Primer3: not found at this Tm | N.d. | 0.04 |
| mm4_intron_Sgce_chr6_4733581_R | Primer3: not found at this Tm | N.d. | 0.04 |
| mm4_intergenic_Nav1|Nav1/Gm4793_chr1_135577870_F | TCGTCGGCAGCGTCCCTACAAAGTGCCTCCCCAG | 60.0 | 0.04 |
| mm4_intergenic_Nav1|Nav1/Gm4793_chr1_135577870_R | GTCTCGTGGGCTCGGGCTCCGCCTTCTCTCTACAG | 59.6 | 0.04 |
| mm4_intron_Alx3_chr3_107600303_F | TCGTCGGCAGCGTCCCCCATCACCACATCTTCCC | 60.1 | 0.04 |
| mm4_intron_Alx3_chr3_107600303_R | GTCTCGTGGGCTCGGCTTCCCCTTCCCTTCCTCCT | 60.2 | 0.04 |
| mm3_intergenic_Mogat2|Gm26705_chr7_99256478_F | Primer3: not found at this Tm | N.d. | 0.04 |
| mm3_intergenic_Mogat2|Gm26705_chr7_99256478_R | Primer3: not found at this Tm | N.d. | 0.04 |
| mm4_intron_Klhl42_chr6_147092467_F | TCGTCGGCAGCGTCGGCATCTTGCTTAGTGCTGC | 59.9 | 0.04 |
| mm4_intron_Klhl42_chr6_147092467_R | GTCTCGTGGGCTCGGCCATTCTTACCTGGGGCCTG | 60.1 | 0.04 |
| mm4_exon_Dlat_chr9_50644207_F | TCGTCGGCAGCGTCTCAGCTGACTCCAGACGGTA | 59.9 | 0.03 |
| mm4_exon_Dlat_chr9_50644207_R | GTCTCGTGGGCTCGGAAACCTCTGCTTTGGCCAGT | 60.1 | 0.03 |
| mm4_intron_Ptpn13_chr5_103447196_F | TCGTCGGCAGCGTCTACCTGTTAGGGATCCCGCA | 60.0 | 0.03 |
| mm4_intron_Ptpn13_chr5_103447196_R | GTCTCGTGGGCTCGGGCAGGAACCCTCAGAGGTTC | 60.0 | 0.03 |
| mm4_intron_Trpc4ap_chr2_155686357_F | TCGTCGGCAGCGTCTGGAAGAAACAGCTTCAGAAAGA | 58.2 | 0.03 |
| mm4_intron_Trpc4ap_chr2_155686357_R | GTCTCGTGGGCTCGGCTCCCAAGGCCACAGTGTAG | 60.0 | 0.03 |
| mm3_intergenic_Zfp521|Gm5160_chr18_14281569_F | TCGTCGGCAGCGTCAGAATGTGGGGCTCTGATGC | 60.1 | 0.03 |
| mm3_intergenic_Zfp521|Gm5160_chr18_14281569_R | GTCTCGTGGGCTCGGTGCAAGCTCCTGAGAAGCAG | 60.3 | 0.03 |
| mm4_intergenic_Fam43a|Gm26295_chr16_30682856_F | Primer3: not found at this Tm | N.d. | 0.03 |
| mm4_intergenic_Fam43a|Gm26295_chr16_30682856_R | Primer3: not found at this Tm | N.d. | 0.03 |
| mm4_intron_Bsn_chr9_108156428_F | TCGTCGGCAGCGTCGCCTCGTCTGCTCCTCATTT | 60.1 | 0.03 |
| mm4_intron_Bsn_chr9_108156428_R | GTCTCGTGGGCTCGGTTTGGAGAACCATGGCTGCT | 59.8 | 0.03 |
| mm4_intergenic_Gm22042|Gm12461_chr4_51867033_F | Primer3: not found at this Tm | N.d. | 0.03 |
| mm4_intergenic_Gm22042|Gm12461_chr4_51867033_R | Primer3: not found at this Tm | N.d. | 0.03 |
| mm4_intron_Heatr5b_chr17_78777234_F | Primer3: not found at this Tm | N.d. | 0.03 |
| mm4_intron_Heatr5b_chr17_78777234_R | Primer3: not found at this Tm | N.d. | 0.03 |
| mm4_exon_Tmem109_chr19_10871768_F | TCGTCGGCAGCGTCGACGCCCTTGTCACTCTTCT | 59.6 | 0.03 |
| mm4_exon_Tmem109_chr19_10871768_R | GTCTCGTGGGCTCGGCTGGAAGCCAAGGTGAGAGG | 60.0 | 0.03 |
| mm4_intron_Htr7_chr19_36049259_F | Primer3: not found at this Tm | N.d. | 0.03 |
| mm4_intron_Htr7_chr19_36049259_R | Primer3: not found at this Tm | N.d. | 0.03 |
| mm3_intron_Tmem132d_chr5_128103078_F | TCGTCGGCAGCGTCCACTGCCAGACCCTCCTG | 59.3 | 0.03 |
| mm3_intron_Tmem132d_chr5_128103078_R | GTCTCGTGGGCTCGGCCCAACATGCCTTCCTTAGA | 57.1 | 0.03 |
| mm4_intron_4933427D06Rik_chr6_88972648_F | TCGTCGGCAGCGTCTACTGGGCTGGGAGTATGGG | 60.4 | 0.03 |
| mm4_intron_4933427D06Rik_chr6_88972648_R | GTCTCGTGGGCTCGGCGAAGCCCTGGTGTAATGGT | 60.0 | 0.03 |
| mm4_intron_Nt5c3_chr6_56914936_F | TCGTCGGCAGCGTCTCTACTGGCAGAGTTCCCGT | 60.2 | 0.02 |
| mm4_intron_Nt5c3_chr6_56914936_R | GTCTCGTGGGCTCGGTCTCCTTTGCTTTCAGGTCCT | 58.9 | 0.02 |
| mm3_intergenic_Gm7069|Gm10649_chr8_76504642_F | TCGTCGGCAGCGTCACCCAGTCTTCAGAAATGTTACAGT | 60.1 | 0.02 |
| mm3_intergenic_Gm7069|Gm10649_chr8_76504642_R | GTCTCGTGGGCTCGGACCCCTGACGCTCTTCATTG | 60.0 | 0.02 |
| mm4_intron_Scamp2_chr9_57563588_F | Primer3: not found at this Tm | N.d. | 0.02 |
| mm4_intron_Scamp2_chr9_57563588_R | Primer3: not found at this Tm | N.d. | 0.02 |
| mm4_intron_Trappc9_chr15_72666258_F | Primer3: not found at this Tm | N.d. | 0.02 |
| mm4_intron_Trappc9_chr15_72666258_R | Primer3: not found at this Tm | N.d. | 0.02 |
| mm4_intron_Atp2b1_chr10_98981821_F | TCGTCGGCAGCGTCAGTGGTGTGAAATTTATCATGTGCA | 59.7 | 0.02 |
| mm4_intron_Atp2b1_chr10_98981821_R | GTCTCGTGGGCTCGGGACGCACTCCATGAGCAGAA | 60.3 | 0.02 |
| mm4_intron_Sult2b1_chr7_45731989_F | TCGTCGGCAGCGTCGGTGTGAACCCCTTCTTCCC | 60.2 | 0.02 |
| mm4_intron_Sult2b1_chr7_45731989_R | GTCTCGTGGGCTCGGTGTGAGGAAAGCGCCAATTG | 59.4 | 0.02 |
| mm4_intergenic_Rad51b|Zfp36l1/Gm26669_chr12_79761402_F | Primer3: not found at this Tm | N.d. | 0.02 |
| mm4_intergenic_Rad51b|Zfp36l1/Gm26669_chr12_79761402_R | Primer3: not found at this Tm | N.d. | 0.02 |
| mm4_intron_2210408F21Rik_chr6_31311825_F | TCGTCGGCAGCGTCAGTTTATGCCTGGCTCCGTT | 59.6 | 0.02 |
| mm4_intron_2210408F21Rik_chr6_31311825_R | GTCTCGTGGGCTCGGGCGCCTGCTACCTTATTCCT | 59.8 | 0.02 |
| mm4_intergenic_Rnf144b|4931429P17Rik_chr13_47482780_F | Primer3: not found at this Tm | N.d. | 0.02 |
| mm4_intergenic_Rnf144b|4931429P17Rik_chr13_47482780_R | Primer3: not found at this Tm | N.d. | 0.02 |
| mm4_intron_Habp4_chr13_64183071_F | Primer3: not found at this Tm | N.d. | 0.02 |
| mm4_intron_Habp4_chr13_64183071_R | Primer3: not found at this Tm | N.d. | 0.02 |
| mm4_intron_Sh3kbp1_chrX_159703819_F | TCGTCGGCAGCGTCGAAGGGATGGAGCAGGATCG | 59.9 | 0.02 |
| mm4_intron_Sh3kbp1_chrX_159703819_R | GTCTCGTGGGCTCGGGACGGAACCCAGTGCTAGAG | 59.8 | 0.02 |
| mm3_intergenic_Rab11fip1|Got1l1_chr8_27189312_F | Primer3: not found at this Tm | N.d. | 0.02 |
| mm3_intergenic_Rab11fip1|Got1l1_chr8_27189312_R | Primer3: not found at this Tm | N.d. | 0.02 |
| mm4_intergenic_Lrfn2|Gm22978_chr17_49272644_F | TCGTCGGCAGCGTCTAGTCCAGCCTGGTGATCCA | 59.9 | 0.02 |
| mm4_intergenic_Lrfn2|Gm22978_chr17_49272644_R | GTCTCGTGGGCTCGGCGCAAGAAGTGTTTGGCGAT | 59.7 | 0.02 |
| mm4_exon_Pafah1b1_chr11_74724252_F | TCGTCGGCAGCGTCCGTTCGCTCGTCCTCTCG | 60.2 | 0.02 |
| mm4_exon_Pafah1b1_chr11_74724252_R | GTCTCGTGGGCTCGGCCGAGATAGCGAGTGAGGGA | 60.5 | 0.02 |
| mm4_intergenic_n-R5s32|Gm26562_chr16_30179373_F | Primer3: not found at this Tm | N.d. | 0.02 |
| mm4_intergenic_n-R5s32|Gm26562_chr16_30179373_R | Primer3: not found at this Tm | N.d. | 0.02 |
| mm4_intergenic_Gm22308|Cbfa2t2-ps1_chr5_59816725_F | Primer3: not found at this Tm | N.d. | 0.02 |
| mm4_intergenic_Gm22308|Cbfa2t2-ps1_chr5_59816725_R | Primer3: not found at this Tm | N.d. | 0.02 |
| mm4_intron_Gsg1l_chr7_126030481_F | Primer3: not found at this Tm | N.d. | 0.02 |
| mm4_intron_Gsg1l_chr7_126030481_R | Primer3: not found at this Tm | N.d. | 0.02 |
| mm4_intergenic_4930595M18Rik|Gm8822_chrX_81595235_F | Primer3: not found at this Tm | N.d. | 0.02 |
| mm4_intergenic_4930595M18Rik|Gm8822_chrX_81595235_R | Primer3: not found at this Tm | N.d. | 0.02 |
| mm4_intergenic_2310026I22Rik/Camk4|Gm22814_chr18_32955060_F | Primer3: not found at this Tm | N.d. | 0.02 |
| mm4_intergenic_2310026I22Rik/Camk4|Gm22814_chr18_32955060_R | Primer3: not found at this Tm | N.d. | 0.02 |
| mm3_intron_Cd82_chr2_93451386_F | TCGTCGGCAGCGTCGCACCCTGTCACTGTGAGAA | 59.8 | 0.02 |
| mm3_intron_Cd82_chr2_93451386_R | GTCTCGTGGGCTCGGGGGTGCCCACTCCTTTCTTA | 59.3 | 0.02 |
| mm4_intergenic_Rnft2|Gm24050_chr5_118210403_F | TCGTCGGCAGCGTCCTGGCACACTCAGAGAGGTG | 60.0 | 0.02 |
| mm4_intergenic_Rnft2|Gm24050_chr5_118210403_R | GTCTCGTGGGCTCGGAAAGGCCCTGGGGTTTGAC | 60.1 | 0.02 |
| mm4_intergenic_Dio3|Ppp2r5c_chr12_110338092_F | Primer3: not found at this Tm | N.d. | 0.02 |
| mm4_intergenic_Dio3|Ppp2r5c_chr12_110338092_R | Primer3: not found at this Tm | N.d. | 0.02 |
| mm4_intron_Elk3_chr10_93252931_F | Primer3: not found at this Tm | N.d. | 0.02 |
| mm4_intron_Elk3_chr10_93252931_R | Primer3: not found at this Tm | N.d. | 0.02 |
| mm4_intron_Wif1_chr10_121083461_F | Primer3: not found at this Tm | N.d. | 0.02 |
| mm4_intron_Wif1_chr10_121083461_R | Primer3: not found at this Tm | N.d. | 0.02 |
| mm4_exon_Abl1_chr2_31801257_F | TCGTCGGCAGCGTCCACAGGAAAAGCAGGCAAGC | 60.3 | 0.02 |
| mm4_exon_Abl1_chr2_31801257_R | GTCTCGTGGGCTCGGCCATAGCCAGACTCGTGCAT | 59.8 | 0.02 |
| mm4_intergenic_2410004P03Rik|Kcnf1_chr12_17064984_F | TCGTCGGCAGCGTCTTTATGTGGCAATGGAGGGG | 57.8 | 0.01 |
| mm4_intergenic_2410004P03Rik|Kcnf1_chr12_17064984_R | GTCTCGTGGGCTCGGTCACACACTTTTCAGCCCTGT | 60.0 | 0.01 |
| mm3_exon_Gm16364_chr10_39556378_F | TCGTCGGCAGCGTCGGTGTCTAGGGGCACTGTG | 59.7 | 0.01 |
| mm3_exon_Gm16364_chr10_39556378_R | GTCTCGTGGGCTCGGTGCTTGCTTACAACCCCACA | 60.1 | 0.01 |
| mm4_exon_Sacs_chr14_61192294_F | TCGTCGGCAGCGTCACTACCTCCAGAGCTCAGGG | 60.0 | 0.01 |
| mm4_exon_Sacs_chr14_61192294_R | GTCTCGTGGGCTCGGGCGTCACCTTTCTCACAGGA | 59.9 | 0.01 |
| mm4_exon_2410076I21Rik_chr9_58660207_F | Primer3: not found at this Tm | N.d. | 0.01 |
| mm4_exon_2410076I21Rik_chr9_58660207_R | Primer3: not found at this Tm | N.d. | 0.01 |
| mm4_intron_Apbb2_chr5_66497971_F | Primer3: not found at this Tm | N.d. | 0.01 |
| mm4_intron_Apbb2_chr5_66497971_R | Primer3: not found at this Tm | N.d. | 0.01 |
| mm4_intergenic_Gm14487|Cstad_chr2_30589225_F | TCGTCGGCAGCGTCGTTCCAGGTAGGCAAGACCC | 60.0 | 0.01 |
| mm4_intergenic_Gm14487|Cstad_chr2_30589225_R | GTCTCGTGGGCTCGGAGGGAGTCCAGCTGAGATCC | 60.3 | 0.01 |
| mm4_intron_Dsg2_chr18_20559630_F | TCGTCGGCAGCGTCTTATCCCCTCGTCTTGCTGC | 59.8 | 0.01 |
| mm4_intron_Dsg2_chr18_20559630_R | GTCTCGTGGGCTCGGGGCTTGTTTGCTATACATGTGGA | 59.3 | 0.01 |
| mm4_intron_Cnot10_chr9_114591919_F | Primer3: not found at this Tm | N.d. | 0.01 |
| mm4_intron_Cnot10_chr9_114591919_R | Primer3: not found at this Tm | N.d. | 0.01 |
| mm4_intron_Mctp1_chr13_76838288_F | TCGTCGGCAGCGTCTGGCTCGGGTGACTTTAGTG | 59.6 | 0.01 |
| mm4_intron_Mctp1_chr13_76838288_R | GTCTCGTGGGCTCGGAAGACAGAGGCGAGAGATGC | 59.5 | 0.01 |
| mm4_intergenic_Gm25378|Gm11908_chr4_28470871_F | Primer3: not found at this Tm | N.d. | 0.01 |
| mm4_intergenic_Gm25378|Gm11908_chr4_28470871_R | Primer3: not found at this Tm | N.d. | 0.01 |
| mm4_intergenic_Gm3833|Fhit_chr14_10177242_F | Primer3: not found at this Tm | N.d. | 0.01 |
| mm4_intergenic_Gm3833|Fhit_chr14_10177242_R | Primer3: not found at this Tm | N.d. | 0.01 |
| mm4_intron_Asap1_chr15_64354738_F | Primer3: not found at this Tm | N.d. | 0.01 |
| mm4_intron_Asap1_chr15_64354738_R | Primer3: not found at this Tm | N.d. | 0.01 |
| mm3_intergenic_Maf/Gm15655|Dynlrb2_chr8_115849117_F | Primer3: not found at this Tm | N.d. | 0.01 |
| mm3_intergenic_Maf/Gm15655|Dynlrb2_chr8_115849117_R | Primer3: not found at this Tm | N.d. | 0.01 |
| mm4_intron_Ano7_chr1_93396030_F | Primer3: not found at this Tm | N.d. | 0.01 |
| mm4_intron_Ano7_chr1_93396030_R | Primer3: not found at this Tm | N.d. | 0.01 |
| mm4_intron_Ncoa1_chr12_4260517_F | Primer3: not found at this Tm | N.d. | 0.01 |
| mm4_intron_Ncoa1_chr12_4260517_R | Primer3: not found at this Tm | N.d. | 0.01 |
| mm3_exon_Per1_chr11_69107637_F | Primer3: not found at this Tm | N.d. | 0.01 |
| mm3_exon_Per1_chr11_69107637_R | Primer3: not found at this Tm | N.d. | 0.01 |
| mm4_intergenic_Gm22978|Gm20540_chr17_49417886_F | Primer3: not found at this Tm | N.d. | 0.01 |
| mm4_intergenic_Gm22978|Gm20540_chr17_49417886_R | Primer3: not found at this Tm | N.d. | 0.01 |
| mm4_intergenic_4933434M16Rik|2610035D17Rik_chr11_113034142_F | Primer3: not found at this Tm | N.d. | 0.01 |
| mm4_intergenic_4933434M16Rik|2610035D17Rik_chr11_113034142_R | Primer3: not found at this Tm | N.d. | 0.01 |
| mm3_intron_Sec31a_chr5_100367290_F | TCGTCGGCAGCGTCCCTGGGTGGGTTAGGTAGGA | 59.9 | 0.00 |
| mm3_intron_Sec31a_chr5_100367290_R | GTCTCGTGGGCTCGGCCAAGGCCCTGGAAACAAAC | 59.6 | 0.00 |
| mm4_exon_Gm14206_chr11_100278942_F | TCGTCGGCAGCGTCTCACTTCTTCCACAGCCGTC | 59.9 | 0.00 |
| mm4_exon_Gm14206_chr11_100278942_R | GTCTCGTGGGCTCGGCTCCACAAAGCTCTCCCTGG | 60.0 | 0.00 |
| mm4_intergenic_BC040587|Gm26381_chr16_41126815_F | Primer3: not found at this Tm | N.d. | 0.00 |
| mm4_intergenic_BC040587|Gm26381_chr16_41126815_R | Primer3: not found at this Tm | N.d. | 0.00 |
| mm4_exon_Fam20a_chr11_109675984_F | TCGTCGGCAGCGTCGAGAAGAAGTCCTGGGGCTG | 59.7 | 0.00 |
| mm4_exon_Fam20a_chr11_109675984_R | GTCTCGTGGGCTCGGCCCGACATCCTGAGATCACG | 59.9 | 0.00 |
| mm4_intron_Ano6_chr15_95919078_F | Primer3: not found at this Tm | N.d. | 0.00 |
| mm4_intron_Ano6_chr15_95919078_R | Primer3: not found at this Tm | N.d. | 0.00 |
| mm4_intron_Prdm16_chr4_154510785_F | Primer3: not found at this Tm | N.d. | 0.00 |
| mm4_intron_Prdm16_chr4_154510785_R | Primer3: not found at this Tm | N.d. | 0.00 |
| mm4_intron_Gstp1_chr19_4036661_F | TCGTCGGCAGCGTCCAAAGCTCCTTTGCCCATCG | 59.8 | 0.00 |
| mm4_intron_Gstp1_chr19_4036661_R | GTCTCGTGGGCTCGGGGTGAATGATGGGGTGGAGG | 60.1 | 0.00 |
| mm4_intron_Eef1d_chr15_75902272_F | TCGTCGGCAGCGTCGTCACTCCTTGGCCTTCAGA | 59.3 | 0.00 |
| mm4_intron_Eef1d_chr15_75902272_R | GTCTCGTGGGCTCGGGATCTGGCAGCCTCTGAAGG | 60.1 | 0.00 |
| mm4_exon_D230017M19Rik_chr1_72265823_F | Primer3: not found at this Tm | N.d. | 0.00 |
| mm4_exon_D230017M19Rik_chr1_72265823_R | Primer3: not found at this Tm | N.d. | 0.00 |
| mm4_intergenic_Gm24847|Gm26164_chr8_59576279_F | Primer3: not found at this Tm | N.d. | 0.00 |
| mm4_intergenic_Gm24847|Gm26164_chr8_59576279_R | Primer3: not found at this Tm | N.d. | 0.00 |
| mm4_intergenic_Gm24295|Mef2c_chr13_82924711_F | Primer3: not found at this Tm | N.d. | 0.00 |
| mm4_intergenic_Gm24295|Mef2c_chr13_82924711_R | Primer3: not found at this Tm | N.d. | 0.00 |
| mm4_intron_Mbnl2_chr14_120338018_F | Primer3: not found at this Tm | N.d. | 0.00 |
| mm4_intron_Mbnl2_chr14_120338018_R | Primer3: not found at this Tm | N.d. | 0.00 |
| mm4_intron_Dmxl2_chr9_54501280_F | Primer3: not found at this Tm | N.d. | 0.00 |
| mm4_intron_Dmxl2_chr9_54501280_R | Primer3: not found at this Tm | N.d. | 0.00 |
| mm4_exon_AU040320_chr4_126840664_F | TCGTCGGCAGCGTCTGTCGTTGATGTCTCCTTGGT | 59.3 | 0.00 |
| mm4_exon_AU040320_chr4_126840664_R | GTCTCGTGGGCTCGGATCTGAGGACCTCGAGCCAT | 60.1 | 0.00 |
| mm4_intergenic_Zfp184|Pom121l2_chr13_21977671_F | TCGTCGGCAGCGTCACAGTTGAGACAAAGGTGCT | 57.2 | 0.00 |
| mm4_intergenic_Zfp184|Pom121l2_chr13_21977671_R | GTCTCGTGGGCTCGGTGGAGGTTCTTAGTGCCCAA | 58.5 | 0.00 |
| mm4_intergenic_Gm12377|Gm12376_chr3_36754252_F | TCGTCGGCAGCGTCCTTCCAGCACACAAGCAGAC | 59.4 | 0.00 |
| mm4_intergenic_Gm12377|Gm12376_chr3_36754252_R | GTCTCGTGGGCTCGGTCTCCCCATGGACTCTGAGT | 59.2 | 0.00 |
| mm4_intron_Slc22a18_chr7_143475024_F | TCGTCGGCAGCGTCAGGAGGCGTGTCTTGATTGG | 60.0 | 0.00 |
| mm4_intron_Slc22a18_chr7_143475024_R | GTCTCGTGGGCTCGGCACCCCACAATAGCTTGGGT | 59.9 | 0.00 |
| mm4_intron_Tmcc3_chr10_94456133_F | Primer3: not found at this Tm | N.d. | 0.00 |
| mm4_intron_Tmcc3_chr10_94456133_R | Primer3: not found at this Tm | N.d. | 0.00 |
| mm4_intron_Tiam2_chr17_3436984_F | TCGTCGGCAGCGTCGCATGTCACTCTCCTGGGAC | 60.1 | 0.00 |
| mm4_intron_Tiam2_chr17_3436984_R | GTCTCGTGGGCTCGGTAACACCCTCGTGCTGGAAC | 59.9 | 0.00 |
| mm4_intron_Slc12a9_chr5_137316407_F | Primer3: not found at this Tm | N.d. | 0.00 |
| mm4_intron_Slc12a9_chr5_137316407_R | Primer3: not found at this Tm | N.d. | 0.00 |
| mm4_intron_Satb2_chr1_56896001_F | Primer3: not found at this Tm | N.d. | 0.00 |
| mm4_intron_Satb2_chr1_56896001_R | Primer3: not found at this Tm | N.d. | 0.00 |
| mm4_intron_Plxnd1_chr6_115987393_F | Primer3: not found at this Tm | N.d. | 0.00 |
| mm4_intron_Plxnd1_chr6_115987393_R | Primer3: not found at this Tm | N.d. | 0.00 |
| mm4_intron_Pcnxl2_chr8_125839100_F | TCGTCGGCAGCGTCGCAAGAGAAGTCCACCCAGG | 60.3 | 0.00 |
| mm4_intron_Pcnxl2_chr8_125839100_R | GTCTCGTGGGCTCGGGACTGACACTCGAGGGCAAA | 59.9 | 0.00 |
| mm4_intron_Ncoa3_chr2_166027623_F | TCGTCGGCAGCGTCTGTCTTAGGTGGCTCTTGTTAGG | 59.7 | 0.00 |
| mm4_intron_Ncoa3_chr2_166027623_R | GTCTCGTGGGCTCGGAGCCCAGCACTTTCAAAACAG | 59.5 | 0.00 |
| mm4_intron_Myo1e_chr9_70266103_F | Primer3: not found at this Tm | N.d. | 0.00 |
| mm4_intron_Myo1e_chr9_70266103_R | Primer3: not found at this Tm | N.d. | 0.00 |
| mm4_intron_Mbnl2_chr14_120330817_F | Primer3: not found at this Tm | N.d. | 0.00 |
| mm4_intron_Mbnl2_chr14_120330817_R | Primer3: not found at this Tm | N.d. | 0.00 |
| mm4_intron_Lrrc48_chr11_60366383_F | TCGTCGGCAGCGTCGTGAGCAGAAGCCAGAGAGG | 60.1 | 0.00 |
| mm4_intron_Lrrc48_chr11_60366383_R | GTCTCGTGGGCTCGGTTCCATGCTGACGCTTCTCT | 59.3 | 0.00 |
| mm4_intron_Jak3_chr8_71678139_F | TCGTCGGCAGCGTCCCCATCCTTCTGTACACCCC | 59.4 | 0.00 |
| mm4_intron_Jak3_chr8_71678139_R | GTCTCGTGGGCTCGGTCCACAGACCTCCACATCCT | 59.8 | 0.00 |
| mm4_intron_Itgb6_chr2_60613668_F | Primer3: not found at this Tm | N.d. | 0.00 |
| mm4_intron_Itgb6_chr2_60613668_R | Primer3: not found at this Tm | N.d. | 0.00 |
| mm4_intron_Iqsec1_chr6_90792046_F | TCGTCGGCAGCGTCATCCCTGACATGCAACCAGG | 60.0 | 0.00 |
| mm4_intron_Iqsec1_chr6_90792046_R | GTCTCGTGGGCTCGGAAAGGCAAGAGTGGGTTCCC | 60.1 | 0.00 |
| mm4_intron_Il12rb2_chr6_67349535_F | Primer3: not found at this Tm | N.d. | 0.00 |
| mm4_intron_Il12rb2_chr6_67349535_R | Primer3: not found at this Tm | N.d. | 0.00 |
| mm4_intron_Ica1_chr6_8737890_F | Primer3: not found at this Tm | N.d. | 0.00 |
| mm4_intron_Ica1_chr6_8737890_R | Primer3: not found at this Tm | N.d. | 0.00 |
| mm4_intron_Hepacam_chr9_37382249_F | Primer3: not found at this Tm | N.d. | 0.00 |
| mm4_intron_Hepacam_chr9_37382249_R | Primer3: not found at this Tm | N.d. | 0.00 |
| mm4_intron_Dmxl2_chr9_54477735_F | Primer3: not found at this Tm | N.d. | 0.00 |
| mm4_intron_Dmxl2_chr9_54477735_R | Primer3: not found at this Tm | N.d. | 0.00 |
| mm4_intron_Cdyl_chr13_35777489_F | Primer3: not found at this Tm | N.d. | 0.00 |
| mm4_intron_Cdyl_chr13_35777489_R | Primer3: not found at this Tm | N.d. | 0.00 |
| mm4_intron_Cdh23_chr10_60625734_F | Primer3: not found at this Tm | N.d. | 0.00 |
| mm4_intron_Cdh23_chr10_60625734_R | Primer3: not found at this Tm | N.d. | 0.00 |
| mm4_intron_Arhgap33_chr7_30532626_F | TCGTCGGCAGCGTCTCTTGTCACAGAGCAGAGCC | 59.6 | 0.00 |
| mm4_intron_Arhgap33_chr7_30532626_R | GTCTCGTGGGCTCGGCTCGAGCAGACACTTGCAGA | 60.0 | 0.00 |
| mm4_intergenic_Zmpste24|Tmco2_chr4_121101187_F | Primer3: not found at this Tm | N.d. | 0.00 |
| mm4_intergenic_Zmpste24|Tmco2_chr4_121101187_R | Primer3: not found at this Tm | N.d. | 0.00 |
| mm4_intergenic_Sntg1|Gm24765_chr1_9408846_F | TCGTCGGCAGCGTCTGGTGATGATGGTTGTGGTGA | 59.5 | 0.00 |
| mm4_intergenic_Sntg1|Gm24765_chr1_9408846_R | GTCTCGTGGGCTCGGTGTTTTCAGTCACTTTGTTCTTTCA | 58.0 | 0.00 |
| mm4_intergenic_Pabpc1|Ywhaz_chr15_36706150_F | Primer3: not found at this Tm | N.d. | 0.00 |
| mm4_intergenic_Pabpc1|Ywhaz_chr15_36706150_R | Primer3: not found at this Tm | N.d. | 0.00 |
| mm4_intergenic_Olfr767|Olfr768_chr10_129081708_F | Primer3: not found at this Tm | N.d. | 0.00 |
| mm4_intergenic_Olfr767|Olfr768_chr10_129081708_R | Primer3: not found at this Tm | N.d. | 0.00 |
| mm4_intergenic_Olfr765|Olfr767_chr10_129048912_F | Primer3: not found at this Tm | N.d. | 0.00 |
| mm4_intergenic_Olfr765|Olfr767_chr10_129048912_R | Primer3: not found at this Tm | N.d. | 0.00 |
| mm4_intergenic_Nav1|Nav1/Gm4793_chr1_135572806_F | TCGTCGGCAGCGTCCTGAGAACAGGCGCATCAGA | 60.1 | 0.00 |
| mm4_intergenic_Nav1|Nav1/Gm4793_chr1_135572806_R | GTCTCGTGGGCTCGGGGGTGGGTGGGTAAGGATTG | 60.0 | 0.00 |
| mm4_intergenic_Ldhc|Tsg101_chr7_46886788_F | Primer3: not found at this Tm | N.d. | 0.00 |
| mm4_intergenic_Ldhc|Tsg101_chr7_46886788_R | Primer3: not found at this Tm | N.d. | 0.00 |
| mm4_intergenic_Ifitm10|Ctsd_chr7_142375287_F | TCGTCGGCAGCGTCACAACTGTAGTCCGTGGCAG | 59.9 | 0.00 |
| mm4_intergenic_Ifitm10|Ctsd_chr7_142375287_R | GTCTCGTGGGCTCGGCCTCTGCCAGGCTCAAGAAG | 60.3 | 0.00 |
| mm4_intergenic_Gm8321|Inhbb_chr1_119391581_F | Primer3: not found at this Tm | N.d. | 0.00 |
| mm4_intergenic_Gm8321|Inhbb_chr1_119391581_R | Primer3: not found at this Tm | N.d. | 0.00 |
| mm4_intergenic_Gm5611|Chordc1_chr9_18053757_F | Primer3: not found at this Tm | N.d. | 0.00 |
| mm4_intergenic_Gm5611|Chordc1_chr9_18053757_R | Primer3: not found at this Tm | N.d. | 0.00 |
| mm4_intergenic_Gm22227|Zfp703_chr8_26828019_F | Primer3: not found at this Tm | N.d. | 0.00 |
| mm4_intergenic_Gm22227|Zfp703_chr8_26828019_R | Primer3: not found at this Tm | N.d. | 0.00 |
| mm4_intergenic_Gm14970|4930412D23Rik_chrX_127700410_F | TCGTCGGCAGCGTCTCCTTTTCTCACATCAGATCCCA | 59.1 | 0.00 |
| mm4_intergenic_Gm14970|4930412D23Rik_chrX_127700410_R | GTCTCGTGGGCTCGGCCTGTTCCAAGAGCCTCTGG | 60.0 | 0.00 |
| mm4_intergenic_Gm13322|Nebl_chr2_17247905_F | Primer3: not found at this Tm | N.d. | 0.00 |
| mm4_intergenic_Gm13322|Nebl_chr2_17247905_R | Primer3: not found at this Tm | N.d. | 0.00 |
| mm4_intergenic_Gm12287|Gm12288_chr11_63790778_F | Primer3: not found at this Tm | N.d. | 0.00 |
| mm4_intergenic_Gm12287|Gm12288_chr11_63790778_R | Primer3: not found at this Tm | N.d. | 0.00 |
| mm4_intergenic_Gm10698|Gm25439_chr9_33856483_F | Primer3: not found at this Tm | N.d. | 0.00 |
| mm4_intergenic_Gm10698|Gm25439_chr9_33856483_R | Primer3: not found at this Tm | N.d. | 0.00 |
| mm4_intergenic_Fam169b|Gm5334_chr7_68382171_F | Primer3: not found at this Tm | N.d. | 0.00 |
| mm4_intergenic_Fam169b|Gm5334_chr7_68382171_R | Primer3: not found at this Tm | N.d. | 0.00 |
| mm4_intergenic_Epha4|Gm26263_chr1_77584473_F | Primer3: not found at this Tm | N.d. | 0.00 |
| mm4_intergenic_Epha4|Gm26263_chr1_77584473_R | Primer3: not found at this Tm | N.d. | 0.00 |
| mm4_intergenic_Chd9|Gm6658_chr8_90862357_F | TCGTCGGCAGCGTCACTCAATGACTCCCTGGGGT | 60.1 | 0.00 |
| mm4_intergenic_Chd9|Gm6658_chr8_90862357_R | GTCTCGTGGGCTCGGGTTGCTAGGGGCCATGTCAT | 60.1 | 0.00 |
| mm4_intergenic_Ccnk|Ccdc85c_chr12_108206094_F | Primer3: not found at this Tm | N.d. | 0.00 |
| mm4_intergenic_Ccnk|Ccdc85c_chr12_108206094_R | Primer3: not found at this Tm | N.d. | 0.00 |
| mm4_intergenic_Capn13|Galnt14_chr17_73475048_F | TCGTCGGCAGCGTCTGGAAGAGCTAGCTGTTGGT | 58.6 | 0.00 |
| mm4_intergenic_Capn13|Galnt14_chr17_73475048_R | GTCTCGTGGGCTCGGGAGCCAGGGTTCCTAAAGCA | 59.6 | 0.00 |
| mm4_intergenic_Ackr3|5S_rRNA_chr1_90249245_F | Primer3: not found at this Tm | N.d. | 0.00 |
| mm4_intergenic_Ackr3|5S_rRNA_chr1_90249245_R | Primer3: not found at this Tm | N.d. | 0.00 |
| mm4_intergenic_1810058N05Rik|Rap1gap_chr4_137702067_F | TCGTCGGCAGCGTCTACCACTTACGAAGCCTGGC | 59.7 | 0.00 |
| mm4_intergenic_1810058N05Rik|Rap1gap_chr4_137702067_R | GTCTCGTGGGCTCGGTGTGCTTAGTGGCCAGGAAG | 59.9 | 0.00 |
| mm4_exon_Ccdc19_chr1_172537604_F | TCGTCGGCAGCGTCAATCCAGCACCTCAGCAGAC | 60.0 | 0.00 |
| mm4_exon_Ccdc19_chr1_172537604_R | GTCTCGTGGGCTCGGGCCCTTCAAAGCAACCAGAC | 59.6 | 0.00 |
| mm4_exon_Agtr1b_chr3_20367144_F | TCGTCGGCAGCGTCTGCGTGTCTTGTCTGGTCTC | 59.9 | 0.00 |
| mm4_exon_Agtr1b_chr3_20367144_R | GTCTCGTGGGCTCGGCCGCTAGGATTACAGCTGCA | 59.8 | 0.00 |
| mm4_exon_Aen_chr7_78911008_F | TCGTCGGCAGCGTCAGATTTCAGCTGCTGCCTCA | 59.6 | 0.00 |
| mm4_exon_Aen_chr7_78911008_R | GTCTCGTGGGCTCGGCCCTGTAGCTTAGCTTGGCA | 59.7 | 0.00 |
| mm3_intron_Zmpste24_chr4_121094513_F | TCGTCGGCAGCGTCAAGGAGCCCTTGAGCATAGG | 59.1 | 0.00 |
| mm3_intron_Zmpste24_chr4_121094513_R | GTCTCGTGGGCTCGGGTTCCAAGAGCCCTGGTCAA | 59.8 | 0.00 |
| mm3_intron_Crispld2_chr8_120001298_F | Primer3: not found at this Tm | N.d. | 0.00 |
| mm3_intron_Crispld2_chr8_120001298_R | Primer3: not found at this Tm | N.d. | 0.00 |
| mm3_intergenic_Cpt2|4930407G08Rik_chr4_107928058_F | TCGTCGGCAGCGTCCCCTTAAGGAGCCCTTGAGC | 60.1 | 0.00 |
| mm3_intergenic_Cpt2|4930407G08Rik_chr4_107928058_R | GTCTCGTGGGCTCGGGCCCCTGGTCAACAGTCATT | 60.2 | 0.00 |
These only list off-targets that have primers in the table above. Primers underlined, off-targets in bold.
| ontarget_mm0_exon_5730457N03Rik/Evx1_chr6_52313767 |
CCTTGTCGCCTTAGCTCCTCTTCTCAGCCAAGATCCCAGGGAGCCTGGGATTAGGAGCTTACTTGGGGGTTTTCCCCCTC CCCCCCTCTGGAGAGTCCGGGGATGGAGAGCCGAAAGGAC |
| mm2_intron_Galnt7_chr8_57631683 | CCATTCAGTGGGTGTCGCTGCAAGGGCAAACAGGGCCAAGATCCCAGAGAGCCAGGAAGAGCAGCCGTTATCAATTTGA |
| mm3_intron_Tjp2_chr19_24165982 |
ACAGATCTTTCCATTGCTCTGTGAGCTAAGCAACTACCAGGCTCCCTGGGACCTTTGCCGTTAAACAGTATGTCTTTTTA AAAACGTCTTTCTGAAAGAATCCAATGGATGCC |
| mm4_intron_Adcy3_chr12_4136464 |
GCTGGGTGTTGTCCTGTGAACACCTGTTGTTGCTGCCCTGGCTTCCTGGGTTGTTGGCGTCCGCTTATGTCTCTGCTTGT GGACAGGTTTTTGGGAGGACGTCCATTGTC |
| mm4_intergenic_Gm15776|Etv5_chr16_22349000 |
CTCCTCGGCAGTTTAGGGACTGCCACCGCTGCTTTCCCAGGCTTCCTGGGACCTTTTCTTCTCCAGTTCCATGATGTCAG AGACCATGGGGCACCCGGTTTAGAGCTGGGTTT |
| mm3_intron_Erg_chr16_95581434 |
GTGGCAGATGGACAGACCTCAGGCAGTCCTGTGGAACCTGCCTGTCTGGAGAGGTTTCTGTTCAGTACAGTCTCTGACCC CCAAGATACCAGGGAGCCAGGGCTCTCCCTCCTCTGCTCTAAGCCCCAGCCTCAACAA |
| mm4_intergenic_Gm20703|Tgif1_chr17_70836279 |
TTTAGTGGGGATGGAAGCCCAGGCCTTGCCCCTCCAACTGAGCTACATTCCTGGATTCCTGGGATCTTGTTTTGGNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNGAGACAGGGCCGTTACCTCTGCTATC |
| mm4_exon_Inpp5j_chr11_3504774 |
GGTCTGGCCTTCCATGTCTGCAGCAGCCCCCGGCAGCCCAGCCTGGCTCCCTTGGGTTCTGGCTCCAGCTCCTCAGCTCC CAGGAACCAGTGATG |
| mm4_intron_Tnfrsf1a_chr6_125354408 |
AATGTGGTGAACTAGGGCGGGAGGGCACCCTGGATTTGATTCTTGTTGGGATTGGGGAGTGTCAGGGGCTGCCAAAGGCC CAGGGAGCCAGGGAGCAGGGATCCTGGGAAAGGCTTT |
| mm4_exon_Cd177_chr7_24745153 |
GCACAGGTGGGAAGAACAGAATTTGGTATAGGAAGCTACCAGCATCCCAGGGAGCCGGGAGAATATGGAGACACCAATAT TGTCCTGCGCCCCAGGACTGCTGCAGCCTTTACTCCCCAGGAAGGCTGA |
| mm4_intergenic_C330019F10Rik|A830035A12Rik/Gm11649_chr11_107529530 |
TATCTGACAGTTCTGCGGCCTCCATTTCCTTCCTGCACTGCTGATTCAAGACCCCAGGAAGCCTGGCTTCCTGTCGGGGA CAGCTAGAGGGCAGGCTGCAGAGATGCAGACTCAGCAGTACAGGGTTGTGGGAGCAAAA |
| mm4_intron_D030068K23Rik_chr8_109087403 |
GCTCACAGCTGTACAGAGCATCTTCTTAGCAGATGGCTTGGGGAGATTCATGCTAAAAATTAAGTTAATGCTTTATACTT TTCCTATCTCAGAACCTGGTTCCCTTGAATCTTGGTTGCTTCAGTAGCTAGCTCATGGC |
| mm4_intergenic_Prcc|Hdgf_chr3_87886713 |
GTGCTGTGCAACTGCTCTTCCCTGGCTCCCTGTGATTCTGGATCACTTCTGTCACCCTCTAACTGAGGGCCCTCTACTTG CCATGTCC |
| mm4_intron_Auts2_chr5_132473142 |
TGCCAGGCAAGAAGACACTTAACTCTGAAGAGTGGAATCTCAGTCCTGGGTCCCTGGGATTCTGGCCAGTTAACTGCACA GAGTATCATGGGAAACCTCATAGGAAACGATGCCAGCTCC |
| mm4_exon_Hmcn2_chr2_31453118 |
CTGATGGACTCCTGCTCGTGGACATGAAAATCAATGGCATGATCCCAGAGAGCCTGGCTGACGGAGATCTGCGAGTACAG GTACTAGCTCTGGGCTGCTCCGCCAACCCACCCTAAGCAAACAGG |
| mm4_intron_Fggy_chr4_95583855 |
ATGTGAGCTCTCGAGGGGAAAAAAGTCAGGGACCCAGGGAGCCAGGAAGACCCACCTGCTGAGCCTGGGAGCCCTGTCAT GCTCAGGGGAGGCTGTGAGCTTTA |
| mm4_intergenic_Gm22603|Gria1_chr11_57005162 |
GAGAAATGGTCAGGCCTCCCCCAAAGAGCCCGGCTCCCTGGACTCATAGCTCAGAAATAGCCCAGCTGCAAGGCCTGCAG GCAGAGCAACAGTA |
| mm4_intergenic_Rbm15|Gm24383_chr3_107378002 | CCTCACCGAGTCTTTGCTCCGAGAAGACAAGAGCCCGGAGAGCCCGGAACATTACAGAAAGATCATTGGCTTCTCCA |
| mm4_intron_4930471C04Rik_chr14_64100070 |
AGTGGTGGCTGATACAAGCCCACAGGCCATGTCCTCCTTTGACCTGGCTCCCCAGGTTCTTGGCCTGGGGTTCAGAGCAC AGACCTC |
| mm3_intron_Slc25a48_chr13_56468640 |
AAACTGTGCTCCAAGGCCAGGTGCGCCTGGTACTGCCTTGGAGCCGACTCAAGCCAAGGTTCCAGGGAGTCTGGGCACCA GCATGGAAATTTCCCCTTGGAGCTGGATTCAA |
| mm4_intron_Sept9_chr11_117222438 |
TCTAGCCAAGATGCTGCAGGCTAACCAAGCCTCCAGGGAGCCAGGATGACCCGAGGACCTGAAATCCAGCCTGAGTTTGG GATATCTGTGGGTTTTGCTTCTGAACAATCTACGTTCCCCACCCC |
| mm4_intergenic_Cables1|Tmem241_chr18_11953589 |
CAGGGCCTCTCACACTTGTTAGAAGCCAGGGAGCCCAAGTTAGGATTCAAGATTCCAAGGAGCCAGGCTCCTGGCCCACA AATCCCATT |
| mm3_intergenic_Gm5161|Ephb1_chr9_101472505 | TATGTTGCTGACAGCTGGGGTCCTGGCTCCCTGGGCTCCTGGGTAGGGGCACCTCCCAGCTTCCCTGTGACAGAGCTT |
| mm3_intron_Ldlrad3_chr2_102097451 |
CACCTGGGGTCAGCATACAGCAGACACCCCTGGCTCCCTGGGCTGCTGGCTTAGATGCAGATTCCTAGATGCCCTATTTG GGAGATTTCATTCAAGCAGGCTTTGAGTCATTCCT |
| mm4_intergenic_Gm11922|Map3k7_chr4_31803612 |
GGCAGTGAGACCACCAGAATAGCAGAATAGTAACTAGATCTGGGAAAACCAAAATCACAGGGACCCTGGCCCACGGTGCT CTTAAGGAG |
| mm4_intron_Cdkl5_chrX_160994153 |
AGAAGGACCAGGGCTGAGAGTCGTAGCTGCCGGCGGGTCCCGGGCTCTCTGGGAACTTGGGCGGGGGTTTCGGGGGGCCC TCCTCGGCGCTAGCGGAAAAGGGCTTTC |
| mm4_intergenic_Gm23950|Gm11218_chr4_64635323 |
TACCCGAGGTACCTGTGACCTGTAGGGATGTGCTAATCATGAAAGCCGGGATCCTGACTTCCTGGGATCCTGGTTCCAGG GCTTGTTAATATAGTCACAAACCTGGAAGCATGGC |
| mm3_intergenic_Bambi|Gm23643_chr18_3667516 |
GTCTAAATGGCCCCGTCAGTAATTAACATCGCTTCTCATTATTCAACTTGAAAGCTTTTCCAGGCTCCCTGTGACCTTGC CTGGCTTTGTTAAACTGTGGCCTCCAGCCTGGGAGAGAGACCTA |
| mm4_intron_Me3_chr7_89682443 |
TTGTCACCAAGGCCAGTACCTGAACCAGTCTCCCTGGGGTCTTGGGATGGAAAATGGACTTTCTCTTCCCACTCTGAGCC TCCCTTTATCTTTCCACTTTGTGCATAGCCTCATCCGTGTGCT |
| mm2_intron_1600029I14Rik_chr9_99465132 |
GTTAGACAGGCTCCCACTGGGAAGATGGCTTGCATTAACAGCCAAGATGCCAGGGAACCGGGACTGGATACAACGGGTGG AGG |
| mm4_intron_Fhit_chr14_9607181 | CCGCTCCCTGTGTACACATCTTTCTTCCTGGCTCCCCGTGATGTTAGCTGTTGCTGTGAACGCCATTGTG |
| mm3_intergenic_Chst14|Gm14089_chr2_118988149 |
TCTTCCCGTCTTCCCTGTTGCCCAGTCTCCCTGGGATCCTGGCGGAGCCTCCTGAGCTGCCAGTCTGACTCTTCCCTGGC AGCATCTTG |
| mm4_intron_Btbd11_chr10_85508465 |
CTGGTGGCACCTCTCCTAGTGCCAGGCCATGGCTGACTGAGCCCCAGATGGGTGGAGCTGTCCCTGCTCCTTGGGATGTT GGCCAGAGATGATGGGAAAACACCCAGAGCAGAGGCACGAGGAGAAAGCAT |
| mm4_intron_Prr5_chr15_84686645 |
GAGGGGTTTCAGGCCACTACTACCATTGCACCCCAGACCACAGGGAGCCAGGGAGGTAGGGTCAGGGCGTCTCTCCAGAA GGTATAATGAAGAAGGACAAACAGAACCTTTACAACCAGCACTGCTCTGACT |
| mm4_intron_Cdkl4_chr17_80543943 |
ATCATCTCATGGCTCCAGCGCCTCGGACCCACTCCCTGACCCACTCCCCGAGCAGCAGCTCAGTCAGAGGCAGTGGTCCT CCTGATGCTGAGTCAAGGCCCCAGGGAGCACGGACAGCACCCTAGCTGGAGAACGTG |
| mm4_exon_Galntl6_chr8_57777078 |
ACGTCTCCTGGACAGCCTATGTCAACATGGCCTTTACACATCGTTCAACCAGGCTTCCTGGGATCTAGGAAATGTTTCTC CTGACTCCTTTGACCCAGACGCCTGCAACAACACAGTTCA |
| mm4_intergenic_Serp2|Lacc1_chr14_76661920 |
AGAGGTTCGGTTGGATGCTGATTAACAAAACTTAGACATATTTGTGTAGAACTCCCAGGGAGCCAGAATCCCAGGGAATC AGGGCTCTTGGCTTCAGTGATTGTCAAATTCCTCCACTCAAAGCTCTGCA |
| mm4_intron_Ghrh_chr2_157342362 |
TTCCAACCCCACTTTCACCCACTCCCAGTCATTTAGCCCAAGATCAGCCCTGCCACACCCAGCCCCACTCCCACCTGGCT CCCTGGTAGCTCTGCTACTAAACTCCAGAAGCCAGAATTCATGGCTAGGACTCAGCCT |
| mm4_intron_Phf19_chr2_34903962 |
AGCCCAGCATGTTCCTTTGTTGTCTGCTGGCCCAGCATAGCCAGGGTCCCTTTTATCTTGGCTGTCTCCTGTTGACAAGT CTAGGCTATCACAGACCCCCCTTTGTATGCTATCTGGAAGCTGATCACCTACCGG |
| mm4_exon_Ube2o_chr11_116545745 |
TAGGCTGCTCCAATGCTCAGATCTCACCCGGGTCCCTGGGGTCTGGGCACTGGGGAGGGAACAGGCTGGAAGGCAGCAGG CATCGATCGGCCCTCACCCCATTTATGTGCTTACCTCCTCCACCAC |
| mm4_exon_Rcor1_chr12_111113697 |
GAGATGAGTCAGAGGCACGGCCCGTGGTCCCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGGTAACAGAGTAAC ACTAGTAACTTCTTTTGTGCTTTTATCATAAACCTGCTGTGTAGCTGAAGGGGAAGGCAA |
| mm4_intergenic_4631405K08Rik|Plxna2_chr1_194208832 |
TGGTCACCATTACAGGCACTGTGCCTCAGGAGATCATATCCCTCCTCATGTTGAATGAACACTGGTGAGCCAAGAGCACA GAGAGCAGGGACGCTGCTTCTGTGAACCACTGGGCCTAATGCT |
| mm4_intron_Gjb1_chrX_101383444 |
GCTGACCCCGTTTCTGGTAGAATATAGGGGAAGGCCTTAGTCCAGAGGACCCTGATTCCCTGGGGTCCTGGCTTACTTGC ACCTGTCTGTGTTCTATCTCCCTCCCCCAGAGCCATTATTCTGGTGGGGC |
| mm3_intergenic_Gm7931|Slit2_chr5_46825746 |
GCTTCAAGCAAGAGGTGTGCAGCCTACCGCACAATTTATGGAGCATGCAGACGAGAACAACCTGGCTCCCTGGGAAGATG GCTAGGAATTGGCAGAGAACTTTTTGGATCTGAACTCTCAGCTGGGCAAT |
| mm4_intergenic_Gm12435|Invs_chr4_48357827 | TGAAAGACTGTCAGGTATTCCCTGTCATCCTGTCTTCCTGGGATATTTGCTGGCATGCTTTCTTGGTAAATTTCA |
| mm4_intron_Dscam_chr16_96680717 |
CGTCATATGACAGGCAGGGAACTAAAGGACAGAAAAGCAATACATTGCCAGAATTCAAGGCCATGATCCCTGAGAGCCTG GGCTATGGAGGCAGGCTTCACATC |
| mm4_intergenic_App|Cyyr1_chr16_85319769 |
GCCTAGAGCCCACAAAACCTGATTAATTCAGTAACACTGAACCTTAGAGAAAATGTTCAGACAGACTCCTGCCTGGCTCC CTGGGACCTTGCAGAAGTGAAGTTCTTGGATAATTTCGTTTCATAGACAGAGGAAGA |
| mm4_intron_Sema4a_chr3_88454557 |
CACAGTGACCCTTCCTTCCCTTACAGATCAACTTGTGCCTCAGGTGGCCTCTTCTTCTCCCAGCCCCTCCCAGGCTCCCT GGCATCTCTGTTTCTTCGTGCCATTTCGTCCCCTCTGGCACACCCTTCTCCTTCCTC |
| mm4_intron_Glb1l2_chr9_26794365 |
AGGGACATGGCCAAAGTTCAACATAGCAGAGAATTCTTGCACAACACAGGGAGCCAGAAACCCAGGGAGCTGGGTATGCA CTGCTTCCTTGCATCAGGACCATCCATGCAGACCCACTGGAAGT |
| mm3_exon_Slc38a1_chr15_96573913 |
GTGACCCGTGGCAGAGATGCAGTGGGGGTATTCCTAGTGATTCCAACATACCCCACCTCCAGTCTCTCTGGGAACTTGGC TCTTCCACAGTCCTGTCACTCCA |
| mm4_intergenic_Actrt2|Gm13113_chr4_154830299 |
GATTTCCCCACTGCAGCTCTGCCCCCCCCCCAGCTCCCTGGGATCCTAGCCTAGTTTTCATCAGGAAACACCATATAGCT TGTAGAGTACATAGAAATTGCATCCTGAGCTCCCAAAC |
| mm4_intergenic_Mthfs|AF529169_chr9_89376594 |
GGTGACGTGAGGATAAGGCCACTTGGCCTAAAATTCTGCCAAAGAGTAGCAGCAAGGAACCCTGGGAGCCAGGGGTGTGG GGTGTGGGAGTGGTCAAAT |
| mm4_intergenic_Gm16079|Gm13049_chr4_150689845 |
TCAAGGATGCCCTGGCTTTTGGACTTGGCTCCCTGGTATCTTGTTCTTCCTCTGAACTACTTTCCAGATGCCGATCCTGT GGGTCCGGAACACATCTGCCTTCTCTTCCCAAAGCCTCCCAG |
| mm4_intergenic_Igf2os|Ins2_chr7_142674947 |
CCTGCAGCAGAAGGGTGTTATAGGTGAGGTGTTTGTACCAAGGTGGTGGTGGGAGACAGGATACCTGGGAGCCAGGCAGT GAGCCAGTGACTCCAAGG |
| mm4_intron_Mfng_chr15_78767027 |
TGACCTGACCAGACCCTCCCCCATANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGGAAGATAGAATGTATA AGATGAGGCTAGACCCCAGAGAGCCTGGAGGGCTCATCCCTCCCCAGGGAAACTGAG |
| mm4_intron_Ifltd1_chr6_145418625 |
TTCCCAGTTCCCAGCGTTCACGGCTCCCAGTGTTCCCGGCTCCCAGTGTTCCTGGCTCCCAGTNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNTGCTACCCCCAGCTCACCATGTTCCCTCA |
| mm4_intergenic_Bptf|Gm11715_chr11_107148790 |
ACTTTCTCAGCCAGGAAGCTGTAAAGCTAATATCTCAGGAAGCCAGGGTTTTATTAAGCAGTTATTGGCATTACTAATGT GA |
| mm4_intron_Catsperg2_chr7_29711556 |
GTGTGTGTTTGCAGGCACATCTGTGTGCCTGGATCCCTGGGAAGATGGCTTACACCTACCTTTGCAGGATGAAGTTGCCC CAGATGTACAACATGTTGTTCAATGTGTTGAAGAACAAGCCCTTGGGTGTC |
| mm4_intergenic_Gtse1|Trmu_chr15_85877196 |
CTGGAGTGGGGTCCTAGACACAGCAGTGGCAAAGTGAGGTAGGGCACAGACCTTATAAAAGGTCTGCCAAGATGCCAAGG ACCCTGGAGGGATGGCAGCAGATTCTTCCCCAGT |
| mm4_intergenic_Msra|A930011O12Rik_chr14_64533344 |
CCTACCAGAGTTCACAGGGCACCTCTACATCGAAAATATCATTCTCCATGGTGAGGAATTCTAACCCACATCCACTGTAG CCAGGCTCCCAGAGACCCCGGGAGAGGGACACTGACCAGGCCCTAT |
| mm3_intron_Npepps_chr11_97229092 |
GGCACAGCTGGATGATGACTAAAGTGCCAAGGTCCAAGGGAGCCAAGCCGGACAGGTCAGCCACCGAGACCATAAGTCTC TGGACTCACACTGGAGCAG |
| mm4_intergenic_4930594M17Rik|Gm26012_chr18_81944173 |
GATTCGAGAGACACAGCCCCACGCAGAACACATCCACTCAGCGTTCTCAGGTGGCCATTTTAAATGTATCCGGTCAGCAC AGCCAGGTACCCAGGGACCCAGGGACTGTTGTCTATCAGCACGAAGGTGGC |
| mm4_exon_Gm15808_chr16_14067984 |
ATTCCAACCCCACTGTGCAAGGAGAAGTGATGGAGGGTGCAGACAGCCAAGGTGCCAGAGAGCAAGGTGAGACAGAATCT GTATCGGGGTTACAGACCGCGATTCCA |
| mm4_intron_Pold2_chr11_5877232 |
CCCAATCACCAGGGTCTCAAATTCTGCATACCCTCAAATGGAATTATTGATCTGCTTCTGCCCAGCTCCCTGGGACCTCT GCTACCTCTAGGGATGCTATCAGGCATCACTGAAGAAGCCTGTC |
| mm4_intron_Tle4_chr19_14525468 |
ACAGCGAACTTCTCAAACACTATGCCACATATTGGTTCCTAACCCCTGACTCCCTCTTATCTTGGCTTTTCAAAAGCAAA GCAAAGCGAACAGAGTAAAAGGTGTGTGGGACTCGG |
| mm4_intron_Gpr132_chr12_112853937 |
TTCCATGGCTCTGGTTGTCCTGGCCAATTGTCCCATACTCCCTGGGATCTCAGCTGCCCATGCCATCGTCCTCAGCCTGG ATGGATTCCACTCTGGCCATGAGTGATAGGATGCCAGCTAAGAACCGCACTA |
| mm4_exon_Gnas_chr2_174327819 |
CTTCAGGTGGCTGGTACCAGCGGCGCTCGCTAGCTCCCGGCTCTCTGGGCTCGGGGCTGCAGCACCGGCTGGAGCGAACC CTTGTCC |
| mm4_intron_Sema6d_chr2_124644781 |
GCCTGTGTGCAGAATAGGCTCACAGGACAGGTTTCTTCAATGAAAGAGCAGCTCTTTTCCAAGACACCTTATCAGGCAAG ATCCTGAGGAGCCTGGATGTAAGGAGACACCCAAACATCCTCCCC |
| mm4_intron_Il24_chr1_130884210 | CCCAAAGCAACTCAGCCAACTAGCCTGGCTCCCAGGACTCCTGGCTCACCACCCAGGTGATAAGAAGTCT |
| mm3_intron_Abca4_chr3_122139956 |
GTCCTGGGTCAATCCTGCTCTTTATATTGCTCAGGCAATAGATTGTCCCTTTGGGTGACAGCTACATTGCCACATTGCAG ATATCCCTGACTCCCTAGGATCTGGGCTGAGAAAGGAAACCATCAGACCTCCATGCACA |
| mm4_intergenic_Sgms2|Papss1_chr3_131355908 |
GGCTGAGAAAGGTGAGGTCCACCCAAGAGCTCAGAGAGCCGGGGCTGGAAAAGGCAAAGGTTTACAGCTGCTGCCCCAAA CCACACTGCCATTTCTGCCAC |
| mm4_intron_Cntnap5a_chr1_115883348 |
AGAGGGGTGTGAGGTTGTCATTCTATTTCCAGCAGAGACATCTGACTTATTCCTGGCTCCCTGGCCTCTTGCCCTACCAC TGCAGTAGAGCAGCATGCTCCCTATGCTGA |
| mm4_intron_Gm2420_chr5_32724411 |
AACCTCTCAAGCAAGAGCCCACTACAGCAGTACTTTGTGCTCCAAGGTGAGGTACAGACTAGTTACCAGGGAGCCTGGGG CTCACATTACAGTCCTTATTAATTGACACTTAATAAGGACCTCCCAGGGCA |
| mm4_intron_Cda_chr4_138359808 |
CCCTGCGTCAGTGAATCCTTTCATGAGCCAGGCAACATGGGTACCATTATGACTCCCTCTGACAGGAGGGAGGAGCCCAG GGAGCCAGGGATGCGCATGCAGACCTGTTCCA |
| mm4_intergenic_Gm11846|n-R5s182_chr4_12523976 |
TCCTGTGGTGTCTCAGAGGTCTCTCATCCCCAATAGGGGTGAATTAGATGTGAGGTAAAGATACAGAGTGGCTATGGCCG AGCTTCCTGGCTTCTTGGCTTCAGGAGGCCCTTCAGGAGGATGAGCATGTCCCT |
| mm3_intergenic_Lca5l|Sh3bgr_chr16_96195163 |
CGTCCAGATCAAAGGATGGTTTGTGCCAAGTACCCAGGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTAACAATCGTCATATTTAGAGACGGT |
| mm4_exon_Car4_chr11_84957768 |
CTGGACAAGGCGAAGAGAGGCTCCGCCAGGAGGAGGAGCCGACTCCCACGTCTAGCCGTCCGGGCTCCCTTAGGTCGTGG CTCTGCTATAAAGCCTCCACCAGCATGATC |
| mm4_intergenic_Gm13018|Prdm2_chr4_142956560 | TGTGCTCACAATCCATGGGATACTTCCAGGGAGACTAGCCAGATTCCCAGGGAGCTTGGCAGTCTGTGCACCTCTCTGG |
| mm4_intergenic_Slco1a6|Slco1a5_chr6_142220103 |
AAGTCACCTCCTGAACCCTTATTCAGTTCAGTCTGAGACAAAAGAGATGCTGNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNAGGATTAGAAGGCTCAAGTTTGT |
| mm4_intergenic_Gm26544|Gpr88_chr3_116201135 |
GAAGGCGAACACCAAAACCCAGATCCCACCTGGCATCCTGGAATCCTGGCTTCCTGTGATATGAGTGGTTGCTCACACTG AAATGCTTCACACGATGACTGATGTCAACCATTACTTCTCTGGTGCTCTTGCTAGGACC |
| mm4_intron_Mrc2_chr11_105339412 |
ATGGAGGCTCTGAGGACTGTAATTTATGGCACATGGCATTGTGATCAGTCACTATCAGTGAAAAAAATTTTTCCAAGTGG ACCCAGGCTCCCTGAGATCTTCATTTTGGGGACATTTCCTCCCAGCGGTCAAG |
| mm3_intergenic_Foxf2|Gm25186_chr13_31642691 |
CAACCACTTCCCTGGGATCCAGTCCTGCTCCCCATCCTATCCCCACCCTCAGCATAGAGAAAAGCTCCCAGGGAGCCCAG ACGTTTCTTCACACACCTCACCTACAAGCCTGTGACTCTACTCAGCC |
| mm4_intergenic_Shank2|Gm14372_chr7_144321024 |
ACAGCACTTCTGCATGGGAAAGGATAGAGTCTCAATGTCTGTGTGACTGCCTGGATCTCAGGGAGCCTGGCTGGCTGCTG TCAGACAGGCAACAT |
| mm4_intron_Camkmt_chr17_85309282 |
TTCGACAAGGCTGGCAAGAACATCTCCTGGCTCCCTCAGATCTTTGATTTGAGATGCTTGGAGATTTACCCTGAGATGGG GGTTTTACAATTTTCCTTTTTAAAAACTTGACACTTCATGAACTTGTGGC |
| mm4_intergenic_Onecut2|Amd-ps3_chr18_64420801 |
TGCAATGACCTACACAGAACCAAAGAGACAGCCAAGATTCCCAGGACCCAGGAATCAGCATTAGACTTTGATGACTCAAA GGTGTGTGGTTGA |
| mm4_intergenic_Gm23459|Gm24634_chr14_106511121 |
AAGAGGGAGAGTTGTGTAGGTAGAGAACTAGCTAGGATCCCATGGAGTCAGGAGAAGGGAACCATGATGAGAATATATTG TTAAAACGTATTTTTAAAAAAAGATTAAAAAGTGTTTCTTGATAGTGGGTAGGT |
| mm3_intergenic_Gm26546|Gnptab_chr10_88393918 |
TAGAGTGCACTTGGTGAGCCCCTAACCTACCTCTTAGCACCGTCATGGAACATAGAACACCCAGACAACATCAAAATGCC AGGCACCCTGGGACCCTGGCTGCAGCCTTCTCAAAACCTTTAGA |
| mm4_intergenic_Gm15387|Bai1_chr15_74318838 |
AAACACTTCCTCCTCGCCTGTCATCCTGTCCCCAGTCTTGGTGACAGCTGCAGGGCCCTTAATCCTTCTTTCACCCACAA GCCAAGCCCCCGTGGAGCCAGGAGTCCAGAGAATTCTGGCCAATGAATCAGGGC |
| mm4_intergenic_Bpgm|Gm13860_chr6_34527167 |
AAGCCCAGCATCACTCCTTCTGGCGAGGCACCATCCCAGGGAGACAGGAAGTCAGCATAGAGTAGAATATGGAGAAATAG TGAGGATGTATGAGTTCCAGGTCTCAGGCT |
| mm4_intergenic_Gm11531|Gm11529_chr11_96421280 |
TGGAATGTGAGCTCTGAAATGCTTTCTTTGAAAAGCCAAGAGCTAAGGGAGTCTGGCAGCCAAGAAANNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNGAGAACTGATAATGATGACCATGAAGCAGTGACA |
| mm4_intergenic_4933406G16Rik|Gm12025_chr11_19076382 |
ACCTTTTGTTGTAAGGGTCTAAGTAANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNAAGAGAGAGGAGGGCAGGC |
| mm4_intergenic_Actr3b|Gm21655_chr5_25902100 |
CACTCAGGTGATAGCCAGTGTATAAGCAGGCAAGAGCCCACGGAGTCTGGCGCTACCTCTCTAATTGTGTGGAAATATTA GCTAATGTGACAACCTGTGTGGAGG |
| mm4_intron_Tg_chr15_66676036 |
TGTGGTCAAGAAGCCAGTCTTTAGCTACCTGCTTTGTACCAAACCCTCCTGTGTCCTAGGTCCCTGGGAGTTTGGCTATC CCACTCCTGCCAATTTTGTCTGTTCCCAGTACAATCCTGCCCCATAGCCTT |
| mm4_intergenic_Grid1|Mir346_chr14_34844498 |
GCAGGGTTGTGTGTCAGGATCTTTCTAGAGATGTGTATGGATGAGTGGGTGATGCTCTCATGAAATAACATGACTGTCAG AAACAATTTATAGTCATGTTCCCATGGAGCCTGGCCTGCTTATGACTGCGGATGCCTCC |
| mm4_intergenic_2410088K16Rik|Sh3bp4_chr1_88906313 |
GCCAAGGCACATCAGGAGAACCAGATTAAATCCAACATTGCCAACTAGGAGTGATCTCCAAACTCATGAAATACAGCAGC CCATGGCCCAGAGCCAGGAGCCCAGGGGACCAGGACTTAATGTAGGCTGAGGAGGGAGC |
| mm4_intergenic_Trpm2/Gm22394|Gm22871/Trpm2_chr10_77913599 |
AAGCAGTCCACATCTGAGCCACTGTGGGTTATCCCCTCCAACATCCCAGTGAGCCTGGCCTAGAACACACCAGAACGTGA GCTTATGAGGAAGCCAGGGAGGGAGCTTCAAAG |
| mm4_intron_1700025C18Rik_chr2_165089748 |
GGGGAGAGATGCAAAGTGCTTGCTCCGTAGGCTGAGATAAGGCCCCAGCTCCCTGGGATCCAGGATCAGAACTACCTTGC CAGGCCCTGCAGGGGGATGTGGGGAGGATTTG |
| mm4_intron_Smyd3_chr1_179027013 |
AAACCCTCGACCAAGCAGAGGGATTCAATAGGATTTGCCAAGTTACCAGGGTGCCAGGATGAAGCCCACTGCCATCCCCC TGGGCCCAAGCAGTCAGAGTTT |
| mm4_intron_Ror2_chr13_53131465 |
CAGGTGGGTCCTAGGCTTTGGCCCCTGCCATCTGTGGCATGGCCAAGCTCCTCGGGAGCCTGGCCTCCTGCAGTATCGTC TTGCTGGGAACATCC |
| mm3_intron_Fan1_chr7_64351143 |
TGGTCATCTTTCCGCCTTCCTATCATGCTCACACTGGCAGCAAAGCTCCCAGGGAGCACAGGGGAGAAAGCAACGTGGGA GTCAAATGCTGGCACACTGG |
| mm4_intergenic_E230016M11Rik|A430010J10Rik_chr6_67090331 |
TGAGCCCAGACTACAGTCCTTAGCCACAGGCCTCACTTCCCAGGTACCCTGGGATCTTGCCAGAAATGTGGCTCACCTCT CAAGAGAGTAATGATGACTCAGCCCGGGTCAGAAGACACCTGAGCACTGC |
| mm4_intron_Fras1_chr5_96717519 |
TGCAGAAGGTAGGCATGAGCCTCCTCCCACTGCTAAGAGGTAAGGCTGGGAGTCCAGTTCCCAGGGAGCTTGGGTTAGAA GACCATCCTCTCCCCATGG |
| mm4_intergenic_Gm9621|Gm24200_chr9_94132827 |
TGTTTCTGAGTGCTACATGATAGGATTACAATTGAAGGTAAGCCCAGATCCCAGGGATATAGGAAATTATGCTATCTTCA CTACAATTGCAGAGAACAATCTTGAGATGTCCAGGAGTGAGGTCCT |
| mm3_intergenic_RP24-86O15.2|Gm10698_chr9_33212766 |
GGGAACTTGTGCAGGAACCATGAAACGTGATGCAGACAAAGGAGCTTGGCTCCCTGGGATAGTGGATTCAAGAGAGTCCC TGAGCTT |
| mm4_intron_Hivep3_chr4_119873734 |
ACCACACAGCTCTTCACTAGCTACTGAGAAAGTCATTAATTACTCTCCACTTAAGGAACAGCCACGGTTCCAGGGTGCCA GGCTACTGTCCAAGAAGATAAAAATAAATAGGTGTTCCACCTTCAGGAAGACCCA |
| mm4_intergenic_Nav1|Nav1/Gm4793_chr1_135577870 |
CCTACAAAGTGCCTCCCCAGCAAGGGGACCTTGGTATTCTAGGCTCCCTGGCACCTTGGAGACTCTGTAGAGAGAAGGCG GAGC |
| mm4_intron_Alx3_chr3_107600303 |
CCCCATCACCACATCTTCCCAGACCACAGAGCATGTGGCTCCCTAGGGCCCCCTCCCCAGCTGGAGGCTCAGCAGTCAGG CCTCTAAATGCCAGGCTCCCAGGGAGGGTGGCTGCCAGGAGGAAGGGAAGGGGAAG |
| mm4_intron_Klhl42_chr6_147092467 |
GGCATCTTGCTTAGTGCTGCTGGCCTGTCGCCTCTGGCGGAGTTCCCAGGGAGCCCAGGGCTTGCTAGGAAGAAGACGAG TACTGTGTCAGCTAGCCTAGTGGTCTTCTTTCAGGTGCAGGCCCCAGGTAAGAATGG |
| mm4_exon_Dlat_chr9_50644207 |
TCAGCTGACTCCAGACGGTACCTAACTCAGTCTGCTTGCCTCTTCCTCGGCTCCCTGGTAGCTTACCTCACACGCCAGAG TAAGACAAAGGACTGCTCCTCCTAGACTGGCCAAAGCAGAGGTTT |
| mm4_intron_Ptpn13_chr5_103447196 | TACCTGTTAGGGATCCCGCAAGCCAGGCTCCCAGGAAGGCAGGAGAACCTCTGAGGGTTCCTGC |
| mm4_intron_Trpc4ap_chr2_155686357 |
TGGAAGAAACAGCTTCAGAAAGAAACAAGTTAGTTAGAAAGCCTGGCTCACTGGCTTCTTGGGTCTTCCTCCTGCATAGC TGCAGCTACACTGTGGCCTTGGGAG |
| mm3_intergenic_Zfp521|Gm5160_chr18_14281569 |
AGAATGTGGGGCTCTGATGCACAGACTAACCTGTCTTTTCTTGCCCTGCACCTTTCTATAAAGATTCTATTCTAGGCTCC CTGGGCACTTGCCTGGGACCCTTCACCTTCTGACATCTGCTTCTCAGGAGCTTGCA |
| mm4_intron_Bsn_chr9_108156428 |
GCCTCGTCTGCTCCTCATTTCTGCAATAAGGCAGGCTCCCCGGGAGCCAGGAACAAACCTGCCAGCAGCCATGGTTCTCC AAA |
| mm4_exon_Tmem109_chr19_10871768 |
GACGCCCTTGTCACTCTTCTTCCATGCTCCTGGGCATCTTGGCTGCTCGCCTCTGCCTCCCTCTAAGCTCTTCTATCTGG CGCTCCAGCCCTCTCACCTTGGCTTCCAG |
| mm3_intron_Tmem132d_chr5_128103078 |
CACTGCCAGACCCTCCTGGGTACTTTAGTCAGCTAAGATCCCTGGGAGGCGGGTGAGATAATTCTGCTTAAAGTTGCTCA AGAAAAATACAATCCGACATGAAAAATAAGGACTAACCTATCTAAGGAAGGCATGTTGGG |
| mm4_intron_4933427D06Rik_chr6_88972648 |
TACTGGGCTGGGAGTATGGGGCAGCAGAGCTGGCTTTGCCTGGCTCACTGAGATCTTAGTTCAATCTCCAGCATTACCTT TCCTCCACCTCCTAATACCATTACACCAGGGCTTCG |
| mm4_intron_Nt5c3_chr6_56914936 |
TCTACTGGCAGAGTTCCCGTAGCCCAGCTGGGCTCTTGTCTTACTACTGGGTTTCCTGCCCTTCCTCTCTGGGATCTTGC CTCATAAGCAGCTTGGAAAACTAAGGACCTGAAAGCAAAGGAGA |
| mm3_intergenic_Gm7069|Gm10649_chr8_76504642 |
ACCCAGTCTTCAGAAATGTTACAGTAACGAGATCATATCATAGTGTATGGACATAAGATTTCCAAAGTCTTGCTCCCTGG GATCTTTGCCACAAAATGGTAAGACACTGAGCAAGCAGAGCAATGAAGAGCGTCAGGGGT |
| mm4_intron_Atp2b1_chr10_98981821 |
AGTGGTGTGAAATTTATCATGTGCAAAGTCTTAGGGCCAGCCTCCCTGGCATCTCAGCTACTTCATTTATCGGATGTACT GACTAGACATGCCCTCAGATGTGATAGAAGTTCTGCTCATGGAGTGCGTC |
| mm4_intron_Sult2b1_chr7_45731989 |
GGTGTGAACCCCTTCTTCCCATACCATTGTTCCCACACCCTCCTCCCTCGGATCTTGGCACAAGATTTCTCTCGATTTGC CCTTTGTCACTGATAAACTCAATTGGCGCTTTCCTCACA |
| mm4_intron_2210408F21Rik_chr6_31311825 |
AGTTTATGCCTGGCTCCGTTCAGCCAAGTTCCCATGGACCAAGGAGACCTCAGATGAGTGTCCCCCAGGCCTTTGCAGTA CCACGCCCCGAGGAACAAAAGGGAGAAGAAAGGAATAAGGTAGCAGGCGC |
| mm4_intron_Sh3kbp1_chrX_159703819 |
GAAGGGATGGAGCAGGATCGATTCCTACCATTTGTTGCCAAGATCCCAGGGGCCTGGGGTGTATAGCTTCTCTAGCACTG GGTTCCGTC |
| mm4_intergenic_Lrfn2|Gm22978_chr17_49272644 |
TAGTCCAGCCTGGTGATCCATCCTGGAGAGAATATGCATTTGAGAAAATCAACCCTCCTGGAGCTTGGAGTTCAGAAAAG ATCCCAGCGAGGCTGGAGGCATGGATCCAATCGCCAAACACTTCTTGCG |
| mm4_exon_Pafah1b1_chr11_74724252 |
CGTTCGCTCGTCCTCTCGCTCGCGCCTGAGCGCTCCCCTCCGGGTCCTCCTCGCTCCCTGGACTCTCGGCTCGCTGCTCC TTCGCTCCCTCACTCGCTATCTCGG |
| mm3_intron_Cd82_chr2_93451386 |
GCACCCTGTCACTGTGAGAACTATGTAACACCTCACCTCTCTGCCAGGCTCCCAGGGAGCCTGAGGGAGTGTGTGAGAAA CTATCTGTGGTCAGCAGCTATAATGCACAGGGTGTCATTATAAGAAAGGAGTGGGCACCC |
| mm4_intergenic_Rnft2|Gm24050_chr5_118210403 |
CTGGCACACTCAGAGAGGTGTCTAAAGCACCATGTCTTCCATTATCTGTACAATGTACCATCAGCCAGCATCCCTGTGAG CCAGGCACAGTCAAACCCCAGGGCCTTT |
| mm4_exon_Abl1_chr2_31801257 |
CACAGGAAAAGCAGGCAAGCCCGCACAGAGCCCCAGCCAAGAGGCCGGGGAGGCAGGGGGGCCCACAAAGACAAAATGCA CGAGTCTGGCTATGG |
| mm4_intergenic_2410004P03Rik|Kcnf1_chr12_17064984 |
TTTATGTGGCAATGGAGGGGGCTGGCCTAGCCCCCTGGGACCTGGGCTAACCCTCCATTTTTAATCTGTTATTTAGGAGT TCAAGGAAGTGTTCACATGAACAGGGCTGAAAAGTGTGTGA |
| mm3_exon_Gm16364_chr10_39556378 |
GGTGTCTAGGGGCACTGTGCCACCTGCAGGGAGCCAAGGAGCCAGGGAGCCAGAGGCCTGGAGCGATGACTGGTGGCTTG TGGGGTTGTAAGCAAGCA |
| mm4_exon_Sacs_chr14_61192294 |
ACTACCTCCAGAGCTCAGGGAAGCAGATTGCCAAGGTCCCAGGGAACTTGGCTGCTGCTGTTCAGCTCAGTGCAGCCTCT GCCACCTCCAGTGCGTCTCCTGTGAGAAAGGTGACGC |
| mm4_intergenic_Gm14487|Cstad_chr2_30589225 | GTTCCAGGTAGGCAAGACCCACTAGTCAAGATCCTCTCTCCCTGGGTCCTTGGCTGGATCTCAGCTGGACTCCCT |
| mm4_intron_Dsg2_chr18_20559630 |
TTATCCCCTCGTCTTGCTGCTTCCTAGCTAAGGGGAATCCCAAGCCAAGAGCCCTGGGTACCTGGTTCAGTATGAATTCC CTTCATTGAAGAAAAGAAACTCCCTTTAAGGTAAAACTCCACATGTATAGCAAACAAGCC |
| mm4_intron_Mctp1_chr13_76838288 |
TGGCTCGGGTGACTTTAGTGACAAACTTGAAGTTAAAGCTGTGACAGCATAAGAAGGCCATCAGATCAGATGAACTGAGG AAGACTCAGTCCAGCCAACATCCCAGGGGGATGGGGGCATCTCTCGCCTCTGTCTT |
| mm3_intron_Sec31a_chr5_100367290 |
CCTGGGTGGGTTAGGTAGGAAAGGTCATTTGGCACAGGCTTTCACTACAGAGCTTAGCCAAGACCAGCCTCACTGGGATC TGGGCTGTTTGTTTCCAGGGCCTTGG |
| mm4_exon_Gm14206_chr11_100278942 |
TCACTTCTTCCACAGCCGTCTACATGACAAAGTGCTTCCCCCGCCTCGCTGGGATCCAGGCTGCTTCCAGGGAGAGCTTT GTGGAG |
| mm4_exon_Fam20a_chr11_109675984 |
GAGAAGAAGTCCTGGGGCTGGAAAAGCCAAGATGCCAGGGTGTTGGGGGCCCTCTCCATACTATCCCCACATTCACAAAT CCCTGCTTCCCCAAGCCTGCCCTGGCCTCGTGATCTCAGGATGTCGGG |
| mm4_intron_Gstp1_chr19_4036661 |
CAAAGCTCCTTTGCCCATCGCTCCCAACCCCCACTCCCCGGGATCTAGGCTCACATAGTTGGTGTAGATGAGGGTGACAT ATTTGCCGCGAAGGTCCTCCACCCCATCATTCACC |
| mm4_intron_Eef1d_chr15_75902272 |
GTCACTCCTTGGCCTTCAGAAACTAATCTTAGGATTCCACCTGTGTTGGAGCCAAGAGCCCTTGGAGGCCGGTAGCTAGG CAGGGTTCTTTCCCCATAGGGAGGCCCAAAGGACAAGCACCCTTCAGAGGCTGCCAGATC |
| mm4_exon_AU040320_chr4_126840664 |
TGTCGTTGATGTCTCCTTGGTTAGAAATAAACAAACCGCCAGTAGCCAAGATCGCTGGGAACGTGGTGGTGACCTTGCCC ACGAGCACAGCTGAGCTGGATGGCTCGAGGTCCTCAGAT |
| mm4_intergenic_Zfp184|Pom121l2_chr13_21977671 |
ACAGTTGAGACAAAGGTGCTAAACTTCTGTTCCATAGCCAGGTTCCCAGGGAGGGAGGTTCACAAATATTTGGGCACTAA GAACCTCCA |
| mm4_intergenic_Gm12377|Gm12376_chr3_36754252 |
CTTCCAGCACACAAGCAGACGGTGTCCTCCCTCCCTGGCCTCTTGGCTCACTCTCTACAGTGACCATCATTGGAAGCTTT GCTTCACTTTGTATTGAGGTAGAAGGTACTCAGAGTCCATGGGGAGA |
| mm4_intron_Slc22a18_chr7_143475024 |
AGGAGGCGTGTCTTGATTGGCCAATGAATGCTCAGAGACTGTGTTGCGGGCTAGCCCAGATCCCAGGGTGGGTGGAGCGA GCTCCGGGGCGGGAGAACTAGCCCTGGTGAAGTGGGAGGACCCAAGCTATTGTGGGGTG |
| mm4_intron_Tiam2_chr17_3436984 |
GCATGTCACTCTCCTGGGACCCCCAGCTGCCTTTGATCTTGGCTGTCCTGATGAAGTATATCCGAGTGTCTGTGTAGGAC CATGACCTAGTAAGTTCCAGCACGAGGGTGTTA |
| mm4_intron_Pcnxl2_chr8_125839100 |
GCAAGAGAAGTCCACCCAGGGCTGCGGCACCCGGCTACCTGGGACCTTCACTGCAAACACAGAGCTCAAAGGCAGAATCT GGCCGGAAGTTTGCCCTCGAGTGTCAGTC |
| mm4_intron_Ncoa3_chr2_166027623 |
TGTCTTAGGTGGCTCTTGTTAGGTAGCCAGGCTGCCTTTGACCTTGGCTGAAGCTCCCTCCTGTTTTGAAAGTGCTGGGC T |
| mm4_intron_Lrrc48_chr11_60366383 |
GTGAGCAGAAGCCAGAGAGGCATCTGGGAAACCTGCATGGAAGCCAAGAGTGCAGGCAGCCTGGGAGCTGAGATCAGGTT GCAGACAGCAGCATCTAGAGAAGCGTCAGCATGGAA |
| mm4_intron_Jak3_chr8_71678139 |
CCCATCCTTCTGTACACCCCTGTTTCCTGTTCAGACCTGTTTCTATATCTGCTGTCAATTGCTCCTGCCTGCCTGGAATA TTGGCTTGGCTGACTATGCTAGGATGTGGAGGTCTGTGGA |
| mm4_intron_Iqsec1_chr6_90792046 |
ATCCCTGACATGCAACCAGGCCCAGAATCTGAGAGGATCCCAACCTGAAACCCTCTGTCCTCCATCCAGTGGCCAGGCTG CCTGAGGTCTTGGGTGCCAAAGACAGGGAACCCACTCTTGCCTTT |
| mm4_intron_Arhgap33_chr7_30532626 |
TCTTGTCACAGAGCAGAGCCTATCAGAACCCTGGTGTGGAGGAATAAATAGAAAAATAAAGGGATGAAGCAGTGCCTCCC GGCCAGCTGGGACCTTGGCTTTCTGCAAGTGTCTGCTCGAG |
| mm4_intergenic_Sntg1|Gm24765_chr1_9408846 |
TGGTGATGATGGTTGTGGTGAGAGCCAGGATANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNATGAAAGAACA AAGTGACTGAAAACA |
| mm4_intergenic_Nav1|Nav1/Gm4793_chr1_135572806 |
CTGAGAACAGGCGCATCAGAAAGATGCTCTACCGAGATGCCTGGGAGCTTGGCTCCCTCAGCTCTGGCCACTTGCTCATC CAGCCTCAGACCCCATCCAAACAATCCTTACCCACCCACCC |
| mm4_intergenic_Ifitm10|Ctsd_chr7_142375287 |
ACAACTGTAGTCCGTGGCAGAGAGTTCTGACCTCTCATCTCCAAGACCCCAGGCAGCCGGGCAGGCTCCAACACTGGCTA GACTCAAAAAGCTGAAGACTGCTTCTTGAGCCTGGCAGAGG |
| mm4_intergenic_Gm14970|4930412D23Rik_chrX_127700410 |
TCCTTTTCTCACATCAGATCCCATTCCAGACTGCCAGGAATCTTGGCTAAGGGCAACGAAATAACTGACTTAATGATAAT TACTGTTAACCAGAGGCTCTTGGAACAGG |
| mm4_intergenic_Chd9|Gm6658_chr8_90862357 |
ACTCAATGACTCCCTGGGGTCCCGCTGGGGTCTGTGCCATACCAATTAAGCAGAGGCCTGGCTGCCTAGGAGCTGGGCTT AGAAGTGGATAGTGCGGGGCTCCCAGGGTAATGACATGGCCCCTAGCAAC |
| mm4_intergenic_Capn13|Galnt14_chr17_73475048 |
TGGAAGAGCTAGCTGTTGGTATCTTCCCTTCTGAGAAGGAGACTTCAGGTTCCTATTTGCCTAACTAGACACCATATATT ATCCATCTCCCAGGCTGACTGGGATCTTGCCCCTATTTGCTTTAGGAACCCTGGCTC |
| mm4_intergenic_1810058N05Rik|Rap1gap_chr4_137702067 |
TACCACTTACGAAGCCTGGCTGTGGAAGCCACCATCCCACGCAGCCAGGGGATCCCAGGACAGTCACTAAGAGCACCCAG CCTAGCTCCAGCTTTGCTCCTCGGTGCTTCCTGGCCACTAAGCACA |
| mm4_exon_Ccdc19_chr1_172537604 |
AATCCAGCACCTCAGCAGACACAGAGCTGCTTGCCAACATCCCAGGCAGCAGGGCAGCTTTTCCGCGTGGCTATCGAGAT GGAGAAGAGTTGAGGGAGGTTTTCTTTCTTTTCCCCCTTGGTCTGGTTGCTTTGAAGGGC |
| mm4_exon_Agtr1b_chr3_20367144 | TGCGTGTCTTGTCTGGTCTCTGTTACTCCCTGCTGCCTGGGATCCAGGCTGCCTGCAGCTGTAATCCTAGCGG |
| mm4_exon_Aen_chr7_78911008 |
AGATTTCAGCTGCTGCCTCAGCCATTTGTATGCAGTTCTGCCCTGCCTGCGTGGGATCTGGGCTCAGACAATGGTAATGT ATATAAGCAAGGGAAGCTTGCTGCCAAGCTAAGCTACAGGG |
| mm3_intron_Zmpste24_chr4_121094513 |
AAGGAGCCCTTGAGCATAGGGCACACCCATGGTTCATTTCTCACCTCAGATCCCACTCCCGGCTGCCAGGAATCTTGGCT AAGGGCAGGGATATGACTGACTTATAATGGTTATTGACCAGGGCTCTTGGAAC |
| mm3_intergenic_Cpt2|4930407G08Rik_chr4_107928058 |
CCCTTAAGGAGCCCTTGAGCATAGGGCACCATGGTTCATTTCTCACATCAGATCCCACTCCAGGCTGCCAGGAATCTTGG CTAAGGGCAGGGATATGACTGACTTAATGATAATGACTGTTGACCAGGGGC |