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Contents:In the table below, Illumina Nextera Handle sequences have been added and highlighted in bold. Primers for the on-target have been added for convenience. The table below is sorted by the CFD off-target score. Sites with very low CFD scores < 0.02 are unlikely to be cleaved, see our study Haeussler et al. 2016, Figure 2.
In the protocol by Matthew Canver, Harvard, two PCRs are run: one PCR to amplify the potential off-target, then a second PCR to extend the handles with Illumina barcodes. Please click here to download the protocol. Alternatively, you can have a look at Fu et al, 2014.
If a primer was not found, the reason is usually that the region around the off-target is too repetitive. To avoid unspecific primers, all repeats are masked for the primer design (not for off-target search). If you think that we should change the parameters here or should use different primer3 settings, please let us know.
| Name | Primer Sequence | Tm | CFD Score |
|---|---|---|---|
| ontarget_mm0_exon_5730457N03Rik/Evx1_chr6_52313759_F | TCGTCGGCAGCGTCCTGCCTTGTCGCCTTAGCT | 60.0 | 1.00 |
| ontarget_mm0_exon_5730457N03Rik/Evx1_chr6_52313759_R | GTCTCGTGGGCTCGGGTCCTTTCGGCTCTCCATCC | 60.1 | 1.00 |
| mm2_intergenic_Gm11442|Appbp2/D630032N06Rik_chr11_85224732_F | Primer3: not found at this Tm | N.d. | 0.81 |
| mm2_intergenic_Gm11442|Appbp2/D630032N06Rik_chr11_85224732_R | Primer3: not found at this Tm | N.d. | 0.81 |
| mm3_intergenic_Nup93|Mir138-2_chr8_94315245_F | TCGTCGGCAGCGTCGTGCTGCTGTTCTCTGGAGT | 59.9 | 0.58 |
| mm3_intergenic_Nup93|Mir138-2_chr8_94315245_R | GTCTCGTGGGCTCGGCCGTCTCTGGAACGTACACC | 60.1 | 0.58 |
| mm4_intergenic_n-R5s193|Spsb1_chr4_149856420_F | TCGTCGGCAGCGTCCGGTGACTTGCAGCTGACTA | 60.0 | 0.57 |
| mm4_intergenic_n-R5s193|Spsb1_chr4_149856420_R | GTCTCGTGGGCTCGGAGACACTGGCTCTGAGACCT | 59.8 | 0.57 |
| mm3_intergenic_Gm25818|Creb5_chr6_53435031_F | TCGTCGGCAGCGTCAATGCAGTTCCGAACCACCT | 59.8 | 0.56 |
| mm3_intergenic_Gm25818|Creb5_chr6_53435031_R | GTCTCGTGGGCTCGGAAGCCATCACCAGACTGAGC | 60.0 | 0.56 |
| mm4_intergenic_Ccdc178|Asxl3_chr18_22183122_F | Primer3: not found at this Tm | N.d. | 0.54 |
| mm4_intergenic_Ccdc178|Asxl3_chr18_22183122_R | Primer3: not found at this Tm | N.d. | 0.54 |
| mm3_intergenic_Sema3e|Pclo_chr5_14386651_F | TCGTCGGCAGCGTCTGTTACGGATTTCCAACCGC | 58.8 | 0.51 |
| mm3_intergenic_Sema3e|Pclo_chr5_14386651_R | GTCTCGTGGGCTCGGGCTAGCAGCTATGACCCTGG | 59.9 | 0.51 |
| mm4_intergenic_Ubap2|Dcaf12_chr4_41289867_F | Primer3: not found at this Tm | N.d. | 0.49 |
| mm4_intergenic_Ubap2|Dcaf12_chr4_41289867_R | Primer3: not found at this Tm | N.d. | 0.49 |
| mm4_intron_1700112E06Rik_chr14_22683689_F | Primer3: not found at this Tm | N.d. | 0.41 |
| mm4_intron_1700112E06Rik_chr14_22683689_R | Primer3: not found at this Tm | N.d. | 0.41 |
| mm3_intergenic_Gm5046|Gm23907_chr15_65313530_F | TCGTCGGCAGCGTCCTTTGCATGTGTGGAAGGGC | 60.0 | 0.37 |
| mm3_intergenic_Gm5046|Gm23907_chr15_65313530_R | GTCTCGTGGGCTCGGACAGTACTTTGATTCGTTGTGCA | 59.1 | 0.37 |
| mm4_intergenic_Gm24774|Pcdh17_chr14_83589061_F | Primer3: not found at this Tm | N.d. | 0.36 |
| mm4_intergenic_Gm24774|Pcdh17_chr14_83589061_R | Primer3: not found at this Tm | N.d. | 0.36 |
| mm4_intron_Piezo2_chr18_63217413_F | TCGTCGGCAGCGTCCTGAGGGAAAGAGCCAGTGG | 60.0 | 0.33 |
| mm4_intron_Piezo2_chr18_63217413_R | GTCTCGTGGGCTCGGTGCATTTCCAGCAAACTGCC | 59.9 | 0.33 |
| mm4_intergenic_Gm16056|Dpp6_chr5_26891469_F | Primer3: not found at this Tm | N.d. | 0.32 |
| mm4_intergenic_Gm16056|Dpp6_chr5_26891469_R | Primer3: not found at this Tm | N.d. | 0.32 |
| mm4_intergenic_Edn2|Foxo6_chr4_120182107_F | Primer3: not found at this Tm | N.d. | 0.30 |
| mm4_intergenic_Edn2|Foxo6_chr4_120182107_R | Primer3: not found at this Tm | N.d. | 0.30 |
| mm3_intron_Agk_chr6_40347787_F | TCGTCGGCAGCGTCACCCTGAATCTGGAATAGCCC | 59.2 | 0.30 |
| mm3_intron_Agk_chr6_40347787_R | GTCTCGTGGGCTCGGGGCAGTGCAGTGCTAGGAAT | 60.3 | 0.30 |
| mm4_exon_Lrrc4_chr6_28831642_F | TCGTCGGCAGCGTCTGCACAGTTACCTGCCACAA | 60.1 | 0.28 |
| mm4_exon_Lrrc4_chr6_28831642_R | GTCTCGTGGGCTCGGCTAGCTCACTTAAGCCGGGG | 59.8 | 0.28 |
| mm4_intron_Gpr98_chr13_81332013_F | Primer3: not found at this Tm | N.d. | 0.28 |
| mm4_intron_Gpr98_chr13_81332013_R | Primer3: not found at this Tm | N.d. | 0.28 |
| mm4_intron_Nrxn2_chr19_6511468_F | TCGTCGGCAGCGTCGCTAGGAGGAAGGCATGGTG | 60.1 | 0.28 |
| mm4_intron_Nrxn2_chr19_6511468_R | GTCTCGTGGGCTCGGCCTACCTCCAACACCCCAAA | 59.2 | 0.28 |
| mm4_intergenic_Ncald|Gm23654_chr15_37369084_F | Primer3: not found at this Tm | N.d. | 0.28 |
| mm4_intergenic_Ncald|Gm23654_chr15_37369084_R | Primer3: not found at this Tm | N.d. | 0.28 |
| mm4_intergenic_Cpeb2|C1qtnf7_chr5_43435525_F | TCGTCGGCAGCGTCCCCATATTTCATGACAGCCAACC | 59.9 | 0.26 |
| mm4_intergenic_Cpeb2|C1qtnf7_chr5_43435525_R | GTCTCGTGGGCTCGGAGCACAGTGTCTGGAAGCAA | 59.8 | 0.26 |
| mm4_intron_Rps6ka1_chr4_133864534_F | TCGTCGGCAGCGTCTGGACTGGACCTTAGCTGGT | 60.1 | 0.25 |
| mm4_intron_Rps6ka1_chr4_133864534_R | GTCTCGTGGGCTCGGAGACACTGATTCTGCCCTGG | 59.3 | 0.25 |
| mm4_intron_Pop1_chr15_34496774_F | Primer3: not found at this Tm | N.d. | 0.25 |
| mm4_intron_Pop1_chr15_34496774_R | Primer3: not found at this Tm | N.d. | 0.25 |
| mm4_intergenic_Gm6462|Gm25586_chr1_29224826_F | Primer3: not found at this Tm | N.d. | 0.25 |
| mm4_intergenic_Gm6462|Gm25586_chr1_29224826_R | Primer3: not found at this Tm | N.d. | 0.25 |
| mm4_intron_Agap1_chr1_89627498_F | Primer3: not found at this Tm | N.d. | 0.25 |
| mm4_intron_Agap1_chr1_89627498_R | Primer3: not found at this Tm | N.d. | 0.25 |
| mm4_intergenic_Itm2b|Med4_chr14_73488926_F | TCGTCGGCAGCGTCATGAGGTGGCCAGCTGAAAA | 59.8 | 0.25 |
| mm4_intergenic_Itm2b|Med4_chr14_73488926_R | GTCTCGTGGGCTCGGCCTCAAGCTCAGGACTCTGC | 60.1 | 0.25 |
| mm4_exon_Smg1_chr7_118243253_F | Primer3: not found at this Tm | N.d. | 0.24 |
| mm4_exon_Smg1_chr7_118243253_R | Primer3: not found at this Tm | N.d. | 0.24 |
| mm4_intron_Glrb_chr3_80911353_F | Primer3: not found at this Tm | N.d. | 0.24 |
| mm4_intron_Glrb_chr3_80911353_R | Primer3: not found at this Tm | N.d. | 0.24 |
| mm4_exon_Rnf165_chr18_77462977_F | TCGTCGGCAGCGTCTCCCCTTCATCTTTCTTGCCC | 59.9 | 0.23 |
| mm4_exon_Rnf165_chr18_77462977_R | GTCTCGTGGGCTCGGCAGTTGCCAGCAGGAGTCTC | 60.6 | 0.23 |
| mm3_intron_Ndrg1_chr15_66961966_F | Primer3: not found at this Tm | N.d. | 0.23 |
| mm3_intron_Ndrg1_chr15_66961966_R | Primer3: not found at this Tm | N.d. | 0.23 |
| mm3_intron_Arhgap15_chr2_44287005_F | TCGTCGGCAGCGTCTCAAGCAACTCTCCAGTGGT | 58.8 | 0.23 |
| mm3_intron_Arhgap15_chr2_44287005_R | GTCTCGTGGGCTCGGGTACTCTCAGTTACCTGCCCC | 59.5 | 0.23 |
| mm3_intergenic_Nfic|Celf5/Gm16105_chr10_81455932_F | Primer3: not found at this Tm | N.d. | 0.22 |
| mm3_intergenic_Nfic|Celf5/Gm16105_chr10_81455932_R | Primer3: not found at this Tm | N.d. | 0.22 |
| mm4_intergenic_Helt|Acsl1_chr8_46374175_F | Primer3: not found at this Tm | N.d. | 0.22 |
| mm4_intergenic_Helt|Acsl1_chr8_46374175_R | Primer3: not found at this Tm | N.d. | 0.22 |
| mm4_intron_Tnni1_chr1_135798567_F | TCGTCGGCAGCGTCCTGAGAGCCTGCTTCTGACC | 60.1 | 0.21 |
| mm4_intron_Tnni1_chr1_135798567_R | GTCTCGTGGGCTCGGTCAGAGAAAGACAATGCCTGCT | 59.9 | 0.21 |
| mm4_exon_Flnc_chr6_29454413_F | TCGTCGGCAGCGTCCACCCGGAGACTACAGCATC | 59.8 | 0.21 |
| mm4_exon_Flnc_chr6_29454413_R | GTCTCGTGGGCTCGGAACTGACTCGAGCATGGGTG | 60.0 | 0.21 |
| mm4_intergenic_AC154801.1|BC040587_chr16_40742806_F | Primer3: not found at this Tm | N.d. | 0.19 |
| mm4_intergenic_AC154801.1|BC040587_chr16_40742806_R | Primer3: not found at this Tm | N.d. | 0.19 |
| mm4_intergenic_Gm25658|Atp2b1_chr10_98700062_F | Primer3: not found at this Tm | N.d. | 0.19 |
| mm4_intergenic_Gm25658|Atp2b1_chr10_98700062_R | Primer3: not found at this Tm | N.d. | 0.19 |
| mm4_exon_Flnb_chr14_7927497_F | TCGTCGGCAGCGTCGCCAGGGGACTACAGCATTC | 60.4 | 0.19 |
| mm4_exon_Flnb_chr14_7927497_R | GTCTCGTGGGCTCGGAGGCACAGCTAGATCTCCCA | 60.0 | 0.19 |
| mm4_intron_Gm11213_chr4_63599652_F | Primer3: not found at this Tm | N.d. | 0.19 |
| mm4_intron_Gm11213_chr4_63599652_R | Primer3: not found at this Tm | N.d. | 0.19 |
| mm4_intergenic_Gm8054|Gm22044_chr8_78940820_F | Primer3: not found at this Tm | N.d. | 0.18 |
| mm4_intergenic_Gm8054|Gm22044_chr8_78940820_R | Primer3: not found at this Tm | N.d. | 0.18 |
| mm4_intergenic_Plscr5|Plscr1_chr9_92228995_F | Primer3: not found at this Tm | N.d. | 0.18 |
| mm4_intergenic_Plscr5|Plscr1_chr9_92228995_R | Primer3: not found at this Tm | N.d. | 0.18 |
| mm4_intergenic_Iars|Gm7251_chr13_49749694_F | Primer3: not found at this Tm | N.d. | 0.18 |
| mm4_intergenic_Iars|Gm7251_chr13_49749694_R | Primer3: not found at this Tm | N.d. | 0.18 |
| mm4_intergenic_Gm13668|A630050E04Rik_chr2_74084756_F | TCGTCGGCAGCGTCGAGACTGTGGCCAAGGACTC | 60.0 | 0.17 |
| mm4_intergenic_Gm13668|A630050E04Rik_chr2_74084756_R | GTCTCGTGGGCTCGGTCTTCTGCCAATAAGTGCTCTGA | 59.7 | 0.17 |
| mm4_exon_Adamts14_chr10_61198415_F | TCGTCGGCAGCGTCGGAACCTGTGCTACCTCCTG | 59.7 | 0.17 |
| mm4_exon_Adamts14_chr10_61198415_R | GTCTCGTGGGCTCGGGTGACATGAGCCCATCCCTC | 60.1 | 0.17 |
| mm4_intergenic_Gm13994|Slc24a5_chr2_125046183_F | TCGTCGGCAGCGTCCAGTGGGCATTGCTGGAAAA | 59.3 | 0.16 |
| mm4_intergenic_Gm13994|Slc24a5_chr2_125046183_R | GTCTCGTGGGCTCGGTCCCCTCTAAGTGGTGGGAA | 59.5 | 0.16 |
| mm4_intron_Chchd3_chr6_32871101_F | Primer3: not found at this Tm | N.d. | 0.16 |
| mm4_intron_Chchd3_chr6_32871101_R | Primer3: not found at this Tm | N.d. | 0.16 |
| mm4_exon_Acsl6_chr11_54315334_F | Primer3: not found at this Tm | N.d. | 0.16 |
| mm4_exon_Acsl6_chr11_54315334_R | Primer3: not found at this Tm | N.d. | 0.16 |
| mm4_intergenic_Gm21308|Gm21209_chrY_49559374_F | Primer3: not found at this Tm | N.d. | 0.16 |
| mm4_intergenic_Gm21308|Gm21209_chrY_49559374_R | Primer3: not found at this Tm | N.d. | 0.16 |
| mm4_intergenic_Gm21118|Gm20888_chrY_70430075_F | Primer3: not found at this Tm | N.d. | 0.16 |
| mm4_intergenic_Gm21118|Gm20888_chrY_70430075_R | Primer3: not found at this Tm | N.d. | 0.16 |
| mm4_intergenic_Gm20804|Gm21518_chrY_62179077_F | Primer3: not found at this Tm | N.d. | 0.16 |
| mm4_intergenic_Gm20804|Gm21518_chrY_62179077_R | Primer3: not found at this Tm | N.d. | 0.16 |
| mm4_intergenic_Rdh10|Stau2_chr1_16173476_F | TCGTCGGCAGCGTCCCAGGAAACCACCCTCTGTG | 60.2 | 0.15 |
| mm4_intergenic_Rdh10|Stau2_chr1_16173476_R | GTCTCGTGGGCTCGGGTGTTGTGGAGTCCTGAGGG | 59.9 | 0.15 |
| mm4_intron_Abcg1_chr17_31079258_F | Primer3: not found at this Tm | N.d. | 0.15 |
| mm4_intron_Abcg1_chr17_31079258_R | Primer3: not found at this Tm | N.d. | 0.15 |
| mm4_intergenic_Dleu2|Gm26969_chr14_62137993_F | Primer3: not found at this Tm | N.d. | 0.15 |
| mm4_intergenic_Dleu2|Gm26969_chr14_62137993_R | Primer3: not found at this Tm | N.d. | 0.15 |
| mm4_intron_Klhl29_chr12_5273493_F | TCGTCGGCAGCGTCTCCAAGTGATCACAGCTGCC | 60.3 | 0.15 |
| mm4_intron_Klhl29_chr12_5273493_R | GTCTCGTGGGCTCGGTAGGAAACCCTGGATCCCGT | 59.9 | 0.15 |
| mm4_intergenic_Irx1|Rpl9-ps4_chr13_72447216_F | Primer3: not found at this Tm | N.d. | 0.15 |
| mm4_intergenic_Irx1|Rpl9-ps4_chr13_72447216_R | Primer3: not found at this Tm | N.d. | 0.15 |
| mm4_intergenic_Ccnd1|Tpcn2_chr7_145020987_F | TCGTCGGCAGCGTCCTAATGCCCTCCTGGACCTG | 59.5 | 0.15 |
| mm4_intergenic_Ccnd1|Tpcn2_chr7_145020987_R | GTCTCGTGGGCTCGGCTCAGCATGCGCATCTGTTC | 59.9 | 0.15 |
| mm4_intergenic_Tm2d3|Gm7551_chr7_65727656_F | Primer3: not found at this Tm | N.d. | 0.14 |
| mm4_intergenic_Tm2d3|Gm7551_chr7_65727656_R | Primer3: not found at this Tm | N.d. | 0.14 |
| mm4_intergenic_Gm25261|Gm831_chr4_131359776_F | TCGTCGGCAGCGTCTGAGGGAGGAACAGGTTGGA | 60.1 | 0.13 |
| mm4_intergenic_Gm25261|Gm831_chr4_131359776_R | GTCTCGTGGGCTCGGGGAGACAGAAAGGACCAGCC | 60.0 | 0.13 |
| mm4_intron_Rgs3_chr4_62619998_F | TCGTCGGCAGCGTCCGGGTTATAGGCAGCTGAGG | 59.9 | 0.12 |
| mm4_intron_Rgs3_chr4_62619998_R | GTCTCGTGGGCTCGGAAAACCAAGCAGCAACAGCT | 59.1 | 0.12 |
| mm4_intron_4933434I20Rik_chr8_83366596_F | Primer3: not found at this Tm | N.d. | 0.12 |
| mm4_intron_4933434I20Rik_chr8_83366596_R | Primer3: not found at this Tm | N.d. | 0.12 |
| mm4_intergenic_Gm8521|Gm20918_chrY_4664065_F | Primer3: not found at this Tm | N.d. | 0.12 |
| mm4_intergenic_Gm8521|Gm20918_chrY_4664065_R | Primer3: not found at this Tm | N.d. | 0.12 |
| mm4_intergenic_Gm21943|Gm21724_chrY_57693888_F | Primer3: not found at this Tm | N.d. | 0.12 |
| mm4_intergenic_Gm21943|Gm21724_chrY_57693888_R | Primer3: not found at this Tm | N.d. | 0.12 |
| mm4_intergenic_Gm21923|Gm20880_chrY_50084065_F | Primer3: not found at this Tm | N.d. | 0.12 |
| mm4_intergenic_Gm21923|Gm20880_chrY_50084065_R | Primer3: not found at this Tm | N.d. | 0.12 |
| mm4_intergenic_Gm21902|Gm21285_chrY_53284274_F | Primer3: not found at this Tm | N.d. | 0.12 |
| mm4_intergenic_Gm21902|Gm21285_chrY_53284274_R | Primer3: not found at this Tm | N.d. | 0.12 |
| mm4_intergenic_Gm21895|Gm20933_chrY_65881986_F | Primer3: not found at this Tm | N.d. | 0.12 |
| mm4_intergenic_Gm21895|Gm20933_chrY_65881986_R | Primer3: not found at this Tm | N.d. | 0.12 |
| mm4_intergenic_Gm21877|Gm21530_chrY_62703796_F | Primer3: not found at this Tm | N.d. | 0.12 |
| mm4_intergenic_Gm21877|Gm21530_chrY_62703796_R | Primer3: not found at this Tm | N.d. | 0.12 |
| mm4_intergenic_Gm21874|Gm20821_chrY_9607712_F | Primer3: not found at this Tm | N.d. | 0.12 |
| mm4_intergenic_Gm21874|Gm20821_chrY_9607712_R | Primer3: not found at this Tm | N.d. | 0.12 |
| mm4_intergenic_Gm21873|Gm21760_chrY_80121959_F | Primer3: not found at this Tm | N.d. | 0.12 |
| mm4_intergenic_Gm21873|Gm21760_chrY_80121959_R | Primer3: not found at this Tm | N.d. | 0.12 |
| mm4_intergenic_Gm21853|Gm21679_chrY_29487809_F | Primer3: not found at this Tm | N.d. | 0.12 |
| mm4_intergenic_Gm21853|Gm21679_chrY_29487809_R | Primer3: not found at this Tm | N.d. | 0.12 |
| mm4_intergenic_Gm21849|Gm21117_chrY_51113444_F | Primer3: not found at this Tm | N.d. | 0.12 |
| mm4_intergenic_Gm21849|Gm21117_chrY_51113444_R | Primer3: not found at this Tm | N.d. | 0.12 |
| mm4_intergenic_Gm21848|Gm20736_chrY_65365911_F | Primer3: not found at this Tm | N.d. | 0.12 |
| mm4_intergenic_Gm21848|Gm20736_chrY_65365911_R | Primer3: not found at this Tm | N.d. | 0.12 |
| mm4_intergenic_Gm21841|Gm20842_chrY_71680241_F | Primer3: not found at this Tm | N.d. | 0.12 |
| mm4_intergenic_Gm21841|Gm20842_chrY_71680241_R | Primer3: not found at this Tm | N.d. | 0.12 |
| mm4_intergenic_Gm21841|Gm20842_chrY_71457630_F | Primer3: not found at this Tm | N.d. | 0.12 |
| mm4_intergenic_Gm21841|Gm20842_chrY_71457630_R | Primer3: not found at this Tm | N.d. | 0.12 |
| mm4_intergenic_Gm21840|Gm21258_chrY_52768252_F | Primer3: not found at this Tm | N.d. | 0.12 |
| mm4_intergenic_Gm21840|Gm21258_chrY_52768252_R | Primer3: not found at this Tm | N.d. | 0.12 |
| mm4_intergenic_Gm21837|Gm21910_chrY_66288584_F | Primer3: not found at this Tm | N.d. | 0.12 |
| mm4_intergenic_Gm21837|Gm21910_chrY_66288584_R | Primer3: not found at this Tm | N.d. | 0.12 |
| mm4_intergenic_Gm21825|Gm21333_chrY_82213382_F | Primer3: not found at this Tm | N.d. | 0.12 |
| mm4_intergenic_Gm21825|Gm21333_chrY_82213382_R | Primer3: not found at this Tm | N.d. | 0.12 |
| mm4_intergenic_Gm21822|Gm21763_chrY_19243134_F | Primer3: not found at this Tm | N.d. | 0.12 |
| mm4_intergenic_Gm21822|Gm21763_chrY_19243134_R | Primer3: not found at this Tm | N.d. | 0.12 |
| mm4_intergenic_Gm21813|Gm21777_chrY_87539161_F | Primer3: not found at this Tm | N.d. | 0.12 |
| mm4_intergenic_Gm21813|Gm21777_chrY_87539161_R | Primer3: not found at this Tm | N.d. | 0.12 |
| mm4_intergenic_Gm21808|Gm20866_chrY_70946162_F | Primer3: not found at this Tm | N.d. | 0.12 |
| mm4_intergenic_Gm21808|Gm20866_chrY_70946162_R | Primer3: not found at this Tm | N.d. | 0.12 |
| mm4_intergenic_Gm21800|Gm21729_chrY_41514568_F | Primer3: not found at this Tm | N.d. | 0.12 |
| mm4_intergenic_Gm21800|Gm21729_chrY_41514568_R | Primer3: not found at this Tm | N.d. | 0.12 |
| mm4_intergenic_Gm21799|Gm21835_chrY_37271387_F | Primer3: not found at this Tm | N.d. | 0.12 |
| mm4_intergenic_Gm21799|Gm21835_chrY_37271387_R | Primer3: not found at this Tm | N.d. | 0.12 |
| mm4_intergenic_Gm21796|Gm21462_chrY_86590452_F | Primer3: not found at this Tm | N.d. | 0.12 |
| mm4_intergenic_Gm21796|Gm21462_chrY_86590452_R | Primer3: not found at this Tm | N.d. | 0.12 |
| mm4_intergenic_Gm21792|Gm21287_chrY_88522768_F | Primer3: not found at this Tm | N.d. | 0.12 |
| mm4_intergenic_Gm21792|Gm21287_chrY_88522768_R | Primer3: not found at this Tm | N.d. | 0.12 |
| mm4_intergenic_Gm21778|Gm21746_chrY_6145099_F | Primer3: not found at this Tm | N.d. | 0.12 |
| mm4_intergenic_Gm21778|Gm21746_chrY_6145099_R | Primer3: not found at this Tm | N.d. | 0.12 |
| mm4_intergenic_Gm21774|Gm21805_chrY_42392500_F | Primer3: not found at this Tm | N.d. | 0.12 |
| mm4_intergenic_Gm21774|Gm21805_chrY_42392500_R | Primer3: not found at this Tm | N.d. | 0.12 |
| mm4_intergenic_Gm21767|Gm20822_chrY_15340328_F | Primer3: not found at this Tm | N.d. | 0.12 |
| mm4_intergenic_Gm21767|Gm20822_chrY_15340328_R | Primer3: not found at this Tm | N.d. | 0.12 |
| mm4_intergenic_Gm21767|Gm20822_chrY_14530812_F | Primer3: not found at this Tm | N.d. | 0.12 |
| mm4_intergenic_Gm21767|Gm20822_chrY_14530812_R | Primer3: not found at this Tm | N.d. | 0.12 |
| mm4_intergenic_Gm21766|Gm20800_chrY_73181456_F | Primer3: not found at this Tm | N.d. | 0.12 |
| mm4_intergenic_Gm21766|Gm20800_chrY_73181456_R | Primer3: not found at this Tm | N.d. | 0.12 |
| mm4_intergenic_Gm21766|Gm20800_chrY_73126849_F | Primer3: not found at this Tm | N.d. | 0.12 |
| mm4_intergenic_Gm21766|Gm20800_chrY_73126849_R | Primer3: not found at this Tm | N.d. | 0.12 |
| mm4_intergenic_Gm21763|AC201846.1_chrY_20052850_F | Primer3: not found at this Tm | N.d. | 0.12 |
| mm4_intergenic_Gm21763|AC201846.1_chrY_20052850_R | Primer3: not found at this Tm | N.d. | 0.12 |
| mm4_intergenic_Gm21760|Gm21257_chrY_80327240_F | Primer3: not found at this Tm | N.d. | 0.12 |
| mm4_intergenic_Gm21760|Gm21257_chrY_80327240_R | Primer3: not found at this Tm | N.d. | 0.12 |
| mm4_intergenic_Gm21757|Gm20846_chrY_72543061_F | Primer3: not found at this Tm | N.d. | 0.12 |
| mm4_intergenic_Gm21757|Gm20846_chrY_72543061_R | Primer3: not found at this Tm | N.d. | 0.12 |
| mm4_intergenic_Gm21752|Gm21477_chrY_87104992_F | Primer3: not found at this Tm | N.d. | 0.12 |
| mm4_intergenic_Gm21752|Gm21477_chrY_87104992_R | Primer3: not found at this Tm | N.d. | 0.12 |
| mm4_intergenic_Gm21749|Gm21302_chrY_53832145_F | Primer3: not found at this Tm | N.d. | 0.12 |
| mm4_intergenic_Gm21749|Gm21302_chrY_53832145_R | Primer3: not found at this Tm | N.d. | 0.12 |
| mm4_intergenic_Gm21722|Gm21282_chrY_81138975_F | Primer3: not found at this Tm | N.d. | 0.12 |
| mm4_intergenic_Gm21722|Gm21282_chrY_81138975_R | Primer3: not found at this Tm | N.d. | 0.12 |
| mm4_intergenic_Gm21722|Gm21282_chrY_80915129_F | Primer3: not found at this Tm | N.d. | 0.12 |
| mm4_intergenic_Gm21722|Gm21282_chrY_80915129_R | Primer3: not found at this Tm | N.d. | 0.12 |
| mm4_intergenic_Gm21720|Gm21838_chrY_89040915_F | Primer3: not found at this Tm | N.d. | 0.12 |
| mm4_intergenic_Gm21720|Gm21838_chrY_89040915_R | Primer3: not found at this Tm | N.d. | 0.12 |
| mm4_intergenic_Gm21717|Gm21095_chrY_84085449_F | Primer3: not found at this Tm | N.d. | 0.12 |
| mm4_intergenic_Gm21717|Gm21095_chrY_84085449_R | Primer3: not found at this Tm | N.d. | 0.12 |
| mm4_intergenic_Gm21634|Gm21654_chrY_63734720_F | Primer3: not found at this Tm | N.d. | 0.12 |
| mm4_intergenic_Gm21634|Gm21654_chrY_63734720_R | Primer3: not found at this Tm | N.d. | 0.12 |
| mm4_intergenic_Gm21617|Gm21634_chrY_63216758_F | Primer3: not found at this Tm | N.d. | 0.12 |
| mm4_intergenic_Gm21617|Gm21634_chrY_63216758_R | Primer3: not found at this Tm | N.d. | 0.12 |
| mm4_intergenic_Gm21477|Gm21813_chrY_87327843_F | Primer3: not found at this Tm | N.d. | 0.12 |
| mm4_intergenic_Gm21477|Gm21813_chrY_87327843_R | Primer3: not found at this Tm | N.d. | 0.12 |
| mm4_intergenic_Gm21476|Gm21506_chrY_27533721_F | Primer3: not found at this Tm | N.d. | 0.12 |
| mm4_intergenic_Gm21476|Gm21506_chrY_27533721_R | Primer3: not found at this Tm | N.d. | 0.12 |
| mm4_intergenic_Gm21443|Gm21755_chrY_26278894_F | Primer3: not found at this Tm | N.d. | 0.12 |
| mm4_intergenic_Gm21443|Gm21755_chrY_26278894_R | Primer3: not found at this Tm | N.d. | 0.12 |
| mm4_intergenic_Gm21427|Gm21890_chrY_25765750_F | Primer3: not found at this Tm | N.d. | 0.12 |
| mm4_intergenic_Gm21427|Gm21890_chrY_25765750_R | Primer3: not found at this Tm | N.d. | 0.12 |
| mm4_intergenic_Gm21412|Gm21773_chrY_25252701_F | Primer3: not found at this Tm | N.d. | 0.12 |
| mm4_intergenic_Gm21412|Gm21773_chrY_25252701_R | Primer3: not found at this Tm | N.d. | 0.12 |
| mm4_intergenic_Gm21396|Gm21245_chrY_51840283_F | Primer3: not found at this Tm | N.d. | 0.12 |
| mm4_intergenic_Gm21396|Gm21245_chrY_51840283_R | Primer3: not found at this Tm | N.d. | 0.12 |
| mm4_intergenic_Gm21330|Gm21858_chrY_55719934_F | Primer3: not found at this Tm | N.d. | 0.12 |
| mm4_intergenic_Gm21330|Gm21858_chrY_55719934_R | Primer3: not found at this Tm | N.d. | 0.12 |
| mm4_intergenic_Gm21241|Gm21739_chrY_44083295_F | Primer3: not found at this Tm | N.d. | 0.12 |
| mm4_intergenic_Gm21241|Gm21739_chrY_44083295_R | Primer3: not found at this Tm | N.d. | 0.12 |
| mm4_intergenic_Gm21198|Gm20808_chrY_78411361_F | Primer3: not found at this Tm | N.d. | 0.12 |
| mm4_intergenic_Gm21198|Gm20808_chrY_78411361_R | Primer3: not found at this Tm | N.d. | 0.12 |
| mm4_intergenic_Gm21198|Gm20808_chrY_78201117_F | Primer3: not found at this Tm | N.d. | 0.12 |
| mm4_intergenic_Gm21198|Gm20808_chrY_78201117_R | Primer3: not found at this Tm | N.d. | 0.12 |
| mm4_intergenic_Gm21065|Gm21871_chrY_22873048_F | Primer3: not found at this Tm | N.d. | 0.12 |
| mm4_intergenic_Gm21065|Gm21871_chrY_22873048_R | Primer3: not found at this Tm | N.d. | 0.12 |
| mm4_intergenic_Gm21065|Gm21871_chrY_22648947_F | Primer3: not found at this Tm | N.d. | 0.12 |
| mm4_intergenic_Gm21065|Gm21871_chrY_22648947_R | Primer3: not found at this Tm | N.d. | 0.12 |
| mm4_intergenic_Gm20937|Gm21867_chrY_68306699_F | Primer3: not found at this Tm | N.d. | 0.12 |
| mm4_intergenic_Gm20937|Gm21867_chrY_68306699_R | Primer3: not found at this Tm | N.d. | 0.12 |
| mm4_intergenic_Gm20930|Gm20931_chrY_55201910_F | Primer3: not found at this Tm | N.d. | 0.12 |
| mm4_intergenic_Gm20930|Gm20931_chrY_55201910_R | Primer3: not found at this Tm | N.d. | 0.12 |
| mm4_intergenic_Gm20926|Gm21768_chrY_23710584_F | Primer3: not found at this Tm | N.d. | 0.12 |
| mm4_intergenic_Gm20926|Gm21768_chrY_23710584_R | Primer3: not found at this Tm | N.d. | 0.12 |
| mm4_intergenic_Gm20917|Gm20916_chrY_79307760_F | Primer3: not found at this Tm | N.d. | 0.12 |
| mm4_intergenic_Gm20917|Gm20916_chrY_79307760_R | Primer3: not found at this Tm | N.d. | 0.12 |
| mm4_intergenic_Gm20916|Gm21823_chrY_79530744_F | Primer3: not found at this Tm | N.d. | 0.12 |
| mm4_intergenic_Gm20916|Gm21823_chrY_79530744_R | Primer3: not found at this Tm | N.d. | 0.12 |
| mm4_intergenic_Gm20914|Gm21778_chrY_5854216_F | Primer3: not found at this Tm | N.d. | 0.12 |
| mm4_intergenic_Gm20914|Gm21778_chrY_5854216_R | Primer3: not found at this Tm | N.d. | 0.12 |
| mm4_intergenic_Gm20913|Gm21868_chrY_57175406_F | Primer3: not found at this Tm | N.d. | 0.12 |
| mm4_intergenic_Gm20913|Gm21868_chrY_57175406_R | Primer3: not found at this Tm | N.d. | 0.12 |
| mm4_intergenic_Gm20907|Gm20921_chrY_64461428_F | Primer3: not found at this Tm | N.d. | 0.12 |
| mm4_intergenic_Gm20907|Gm20921_chrY_64461428_R | Primer3: not found at this Tm | N.d. | 0.12 |
| mm4_intergenic_Gm20904|Gm21776_chrY_76220801_F | Primer3: not found at this Tm | N.d. | 0.12 |
| mm4_intergenic_Gm20904|Gm21776_chrY_76220801_R | Primer3: not found at this Tm | N.d. | 0.12 |
| mm4_intergenic_Gm20902|Gm21715_chrY_73657528_F | Primer3: not found at this Tm | N.d. | 0.12 |
| mm4_intergenic_Gm20902|Gm21715_chrY_73657528_R | Primer3: not found at this Tm | N.d. | 0.12 |
| mm4_intergenic_Gm20901|Gm21865_chrY_39718871_F | Primer3: not found at this Tm | N.d. | 0.12 |
| mm4_intergenic_Gm20901|Gm21865_chrY_39718871_R | Primer3: not found at this Tm | N.d. | 0.12 |
| mm4_intergenic_Gm20898|Gm21799_chrY_36747114_F | Primer3: not found at this Tm | N.d. | 0.12 |
| mm4_intergenic_Gm20898|Gm21799_chrY_36747114_R | Primer3: not found at this Tm | N.d. | 0.12 |
| mm4_intergenic_Gm20898|Gm21799_chrY_36448680_F | Primer3: not found at this Tm | N.d. | 0.12 |
| mm4_intergenic_Gm20898|Gm21799_chrY_36448680_R | Primer3: not found at this Tm | N.d. | 0.12 |
| mm4_intergenic_Gm20896|Gm21898_chrY_35933286_F | Primer3: not found at this Tm | N.d. | 0.12 |
| mm4_intergenic_Gm20896|Gm21898_chrY_35933286_R | Primer3: not found at this Tm | N.d. | 0.12 |
| mm4_intergenic_Gm20895|Gm20892_chrY_26788609_F | Primer3: not found at this Tm | N.d. | 0.12 |
| mm4_intergenic_Gm20895|Gm20892_chrY_26788609_R | Primer3: not found at this Tm | N.d. | 0.12 |
| mm4_intergenic_Gm20893|Gm21642_chrY_28283303_F | Primer3: not found at this Tm | N.d. | 0.12 |
| mm4_intergenic_Gm20893|Gm21642_chrY_28283303_R | Primer3: not found at this Tm | N.d. | 0.12 |
| mm4_intergenic_Gm20881|Gm20889_chrY_50596579_F | Primer3: not found at this Tm | N.d. | 0.12 |
| mm4_intergenic_Gm20881|Gm20889_chrY_50596579_R | Primer3: not found at this Tm | N.d. | 0.12 |
| mm4_intergenic_Gm20865|Gm21065_chrY_22063192_F | Primer3: not found at this Tm | N.d. | 0.12 |
| mm4_intergenic_Gm20865|Gm21065_chrY_22063192_R | Primer3: not found at this Tm | N.d. | 0.12 |
| mm4_intergenic_Gm20865|Gm21065_chrY_21838835_F | Primer3: not found at this Tm | N.d. | 0.12 |
| mm4_intergenic_Gm20865|Gm21065_chrY_21838835_R | Primer3: not found at this Tm | N.d. | 0.12 |
| mm4_intergenic_Gm20859|Gm21638_chrY_77307188_F | Primer3: not found at this Tm | N.d. | 0.12 |
| mm4_intergenic_Gm20859|Gm21638_chrY_77307188_R | Primer3: not found at this Tm | N.d. | 0.12 |
| mm4_intergenic_Gm20855|Gm21896_chrY_35143617_F | Primer3: not found at this Tm | N.d. | 0.12 |
| mm4_intergenic_Gm20855|Gm21896_chrY_35143617_R | Primer3: not found at this Tm | N.d. | 0.12 |
| mm4_intergenic_Gm20840|Gm21845_chrY_24226461_F | Primer3: not found at this Tm | N.d. | 0.12 |
| mm4_intergenic_Gm20840|Gm21845_chrY_24226461_R | Primer3: not found at this Tm | N.d. | 0.12 |
| mm4_intergenic_Gm20825|Gm20815_chrY_8728751_F | Primer3: not found at this Tm | N.d. | 0.12 |
| mm4_intergenic_Gm20825|Gm20815_chrY_8728751_R | Primer3: not found at this Tm | N.d. | 0.12 |
| mm4_intergenic_Gm20825|Gm20815_chrY_8463047_F | Primer3: not found at this Tm | N.d. | 0.12 |
| mm4_intergenic_Gm20825|Gm20815_chrY_8463047_R | Primer3: not found at this Tm | N.d. | 0.12 |
| mm4_intergenic_Gm20825|Gm20815_chrY_8246108_F | Primer3: not found at this Tm | N.d. | 0.12 |
| mm4_intergenic_Gm20825|Gm20815_chrY_8246108_R | Primer3: not found at this Tm | N.d. | 0.12 |
| mm4_intergenic_Gm20821|Gm21310_chrY_9980510_F | Primer3: not found at this Tm | N.d. | 0.12 |
| mm4_intergenic_Gm20821|Gm21310_chrY_9980510_R | Primer3: not found at this Tm | N.d. | 0.12 |
| mm4_intergenic_Gm20815|Gm21292_chrY_9073064_F | Primer3: not found at this Tm | N.d. | 0.12 |
| mm4_intergenic_Gm20815|Gm21292_chrY_9073064_R | Primer3: not found at this Tm | N.d. | 0.12 |
| mm4_intergenic_Gm20813|Gm21922_chrY_75184040_F | Primer3: not found at this Tm | N.d. | 0.12 |
| mm4_intergenic_Gm20813|Gm21922_chrY_75184040_R | Primer3: not found at this Tm | N.d. | 0.12 |
| mm4_intergenic_Gm20809|Gm21921_chrY_24739584_F | Primer3: not found at this Tm | N.d. | 0.12 |
| mm4_intergenic_Gm20809|Gm21921_chrY_24739584_R | Primer3: not found at this Tm | N.d. | 0.12 |
| mm4_intergenic_Gm20805|Gm21913_chrY_74458637_F | Primer3: not found at this Tm | N.d. | 0.12 |
| mm4_intergenic_Gm20805|Gm21913_chrY_74458637_R | Primer3: not found at this Tm | N.d. | 0.12 |
| mm4_intergenic_AC201846.1|Gm20910_chrY_21005393_F | Primer3: not found at this Tm | N.d. | 0.12 |
| mm4_intergenic_AC201846.1|Gm20910_chrY_21005393_R | Primer3: not found at this Tm | N.d. | 0.12 |
| mm4_intergenic_AC201846.1|Gm20910_chrY_20862210_F | Primer3: not found at this Tm | N.d. | 0.12 |
| mm4_intergenic_AC201846.1|Gm20910_chrY_20862210_R | Primer3: not found at this Tm | N.d. | 0.12 |
| mm4_intron_Dlg1_chr16_31782399_F | Primer3: not found at this Tm | N.d. | 0.12 |
| mm4_intron_Dlg1_chr16_31782399_R | Primer3: not found at this Tm | N.d. | 0.12 |
| mm4_intergenic_Spata13|C1qtnf9_chr14_60766680_F | TCGTCGGCAGCGTCGGTAACTTGCCGCATCCTCT | 60.1 | 0.12 |
| mm4_intergenic_Spata13|C1qtnf9_chr14_60766680_R | GTCTCGTGGGCTCGGAACCGAGGTTCCTTTCGGAC | 59.9 | 0.12 |
| mm4_intergenic_Gm22785|Gm8410_chrX_70693980_F | TCGTCGGCAGCGTCTGACCACCAGGAGAAGACCA | 60.1 | 0.11 |
| mm4_intergenic_Gm22785|Gm8410_chrX_70693980_R | GTCTCGTGGGCTCGGGGGTCTCTGAGTGTCTGGG | 58.7 | 0.11 |
| mm3_intron_Lrit3_chr3_129793870_F | Primer3: not found at this Tm | N.d. | 0.11 |
| mm3_intron_Lrit3_chr3_129793870_R | Primer3: not found at this Tm | N.d. | 0.11 |
| mm4_intergenic_Gm15867|Syt14_chr1_192891006_F | TCGTCGGCAGCGTCGGTTAGATCTGACTCGTGGTGA | 59.2 | 0.11 |
| mm4_intergenic_Gm15867|Syt14_chr1_192891006_R | GTCTCGTGGGCTCGGACACAATGGGCCAATGTCAC | 59.0 | 0.11 |
| mm4_intron_Rbfox3_chr11_118754506_F | TCGTCGGCAGCGTCACAGGCCATGTGTGTGTCAA | 60.1 | 0.10 |
| mm4_intron_Rbfox3_chr11_118754506_R | GTCTCGTGGGCTCGGCACACCATAGAGTGAGCCCC | 59.8 | 0.10 |
| mm4_intergenic_Mamld1|Gm14730_chrX_71188902_F | Primer3: not found at this Tm | N.d. | 0.10 |
| mm4_intergenic_Mamld1|Gm14730_chrX_71188902_R | Primer3: not found at this Tm | N.d. | 0.10 |
| mm4_intergenic_Gm25796|Gm23337_chr3_45858968_F | Primer3: not found at this Tm | N.d. | 0.10 |
| mm4_intergenic_Gm25796|Gm23337_chr3_45858968_R | Primer3: not found at this Tm | N.d. | 0.10 |
| mm4_intron_Mtch1_chr17_29339978_F | TCGTCGGCAGCGTCCCTCTGACTGGGAAGGACCT | 60.2 | 0.10 |
| mm4_intron_Mtch1_chr17_29339978_R | GTCTCGTGGGCTCGGGGTAAGAGCATGGCAGCTGA | 60.1 | 0.10 |
| mm4_intergenic_Mthfr-ps1|Gm25756_chr5_78515631_F | Primer3: not found at this Tm | N.d. | 0.10 |
| mm4_intergenic_Mthfr-ps1|Gm25756_chr5_78515631_R | Primer3: not found at this Tm | N.d. | 0.10 |
| mm4_intergenic_Gm23673|Gm9381_chr3_124934462_F | TCGTCGGCAGCGTCCTCACTCCTACAGGGAAAACCA | 59.3 | 0.09 |
| mm4_intergenic_Gm23673|Gm9381_chr3_124934462_R | GTCTCGTGGGCTCGGTCAACAGCCAGGGCCAATTT | 60.4 | 0.09 |
| mm4_intergenic_Ntsr1|Mrgbp_chr2_180577768_F | Primer3: not found at this Tm | N.d. | 0.09 |
| mm4_intergenic_Ntsr1|Mrgbp_chr2_180577768_R | Primer3: not found at this Tm | N.d. | 0.09 |
| mm4_intron_Epha3_chr16_63598510_F | Primer3: not found at this Tm | N.d. | 0.09 |
| mm4_intron_Epha3_chr16_63598510_R | Primer3: not found at this Tm | N.d. | 0.09 |
| mm4_intergenic_Gm11922|Map3k7_chr4_31627267_F | Primer3: not found at this Tm | N.d. | 0.09 |
| mm4_intergenic_Gm11922|Map3k7_chr4_31627267_R | Primer3: not found at this Tm | N.d. | 0.09 |
| mm4_intergenic_Plb1|Gm5864_chr5_32398748_F | TCGTCGGCAGCGTCCCAGTGCCAATTTGTCCCCT | 60.5 | 0.09 |
| mm4_intergenic_Plb1|Gm5864_chr5_32398748_R | GTCTCGTGGGCTCGGGGAGCCAGATGACCAAGGAC | 60.1 | 0.09 |
| mm4_intron_Mcf2l_chr8_13006930_F | Primer3: not found at this Tm | N.d. | 0.09 |
| mm4_intron_Mcf2l_chr8_13006930_R | Primer3: not found at this Tm | N.d. | 0.09 |
| mm4_intron_Tmem132d_chr5_128103070_F | TCGTCGGCAGCGTCTCTACTCAGCTGGGGTCACT | 59.5 | 0.09 |
| mm4_intron_Tmem132d_chr5_128103070_R | GTCTCGTGGGCTCGGGCAGAATTATCTCACCCGCCT | 60.2 | 0.09 |
| mm4_intergenic_Gm3104|Gm7353_chr7_3092054_F | TCGTCGGCAGCGTCGCCTCACTTGAGTGGAGGAA | 59.3 | 0.09 |
| mm4_intergenic_Gm3104|Gm7353_chr7_3092054_R | GTCTCGTGGGCTCGGACCATCTCTTTCCAGCTGGG | 59.3 | 0.09 |
| mm4_intergenic_Gm22011|Mthfr-ps1_chr5_78270634_F | Primer3: not found at this Tm | N.d. | 0.08 |
| mm4_intergenic_Gm22011|Mthfr-ps1_chr5_78270634_R | Primer3: not found at this Tm | N.d. | 0.08 |
| mm3_intergenic_Atp1b3|BC043934_chr9_96398824_F | TCGTCGGCAGCGTCCAGAGAGGAAGGGAGGCCT | 59.9 | 0.08 |
| mm3_intergenic_Atp1b3|BC043934_chr9_96398824_R | GTCTCGTGGGCTCGGAACACACCCTTCCCCATTCC | 59.8 | 0.08 |
| mm4_intergenic_Gm6117|Gm13847_chr6_31600110_F | Primer3: not found at this Tm | N.d. | 0.08 |
| mm4_intergenic_Gm6117|Gm13847_chr6_31600110_R | Primer3: not found at this Tm | N.d. | 0.08 |
| mm4_intron_Rcan2_chr17_43802399_F | Primer3: not found at this Tm | N.d. | 0.08 |
| mm4_intron_Rcan2_chr17_43802399_R | Primer3: not found at this Tm | N.d. | 0.08 |
| mm4_intergenic_6030471H07Rik|Gm12416_chr4_84088417_F | Primer3: not found at this Tm | N.d. | 0.08 |
| mm4_intergenic_6030471H07Rik|Gm12416_chr4_84088417_R | Primer3: not found at this Tm | N.d. | 0.08 |
| mm4_intergenic_Gm13677|Zfp804a_chr2_82229227_F | Primer3: not found at this Tm | N.d. | 0.08 |
| mm4_intergenic_Gm13677|Zfp804a_chr2_82229227_R | Primer3: not found at this Tm | N.d. | 0.08 |
| mm4_intergenic_Pgap1|Ankrd44_chr1_54561092_F | Primer3: not found at this Tm | N.d. | 0.08 |
| mm4_intergenic_Pgap1|Ankrd44_chr1_54561092_R | Primer3: not found at this Tm | N.d. | 0.08 |
| mm4_intergenic_Gm24394|Gm25204_chr14_36734642_F | Primer3: not found at this Tm | N.d. | 0.07 |
| mm4_intergenic_Gm24394|Gm25204_chr14_36734642_R | Primer3: not found at this Tm | N.d. | 0.07 |
| mm4_intron_Odf2l_chr3_145146101_F | TCGTCGGCAGCGTCCTGCTGCTTGAGTCTCCTCA | 59.3 | 0.07 |
| mm4_intron_Odf2l_chr3_145146101_R | GTCTCGTGGGCTCGGAAGGTGTCTGAGCTGAGCAC | 59.9 | 0.07 |
| mm4_intergenic_Dock10|Nyap2_chr1_80977703_F | Primer3: not found at this Tm | N.d. | 0.07 |
| mm4_intergenic_Dock10|Nyap2_chr1_80977703_R | Primer3: not found at this Tm | N.d. | 0.07 |
| mm4_intergenic_D10Wsu102e|Aldh1l2_chr10_83485463_F | Primer3: not found at this Tm | N.d. | 0.07 |
| mm4_intergenic_D10Wsu102e|Aldh1l2_chr10_83485463_R | Primer3: not found at this Tm | N.d. | 0.07 |
| mm4_intron_Cntnap5b_chr1_100479559_F | Primer3: not found at this Tm | N.d. | 0.07 |
| mm4_intron_Cntnap5b_chr1_100479559_R | Primer3: not found at this Tm | N.d. | 0.07 |
| mm4_intergenic_Fam155a|Gm10217_chr8_9814928_F | Primer3: not found at this Tm | N.d. | 0.07 |
| mm4_intergenic_Fam155a|Gm10217_chr8_9814928_R | Primer3: not found at this Tm | N.d. | 0.07 |
| mm4_intergenic_Tbx20|Gm23893_chr9_24876977_F | Primer3: not found at this Tm | N.d. | 0.07 |
| mm4_intergenic_Tbx20|Gm23893_chr9_24876977_R | Primer3: not found at this Tm | N.d. | 0.07 |
| mm4_exon_Atp6v1f_chr6_29469027_F | Primer3: not found at this Tm | N.d. | 0.06 |
| mm4_exon_Atp6v1f_chr6_29469027_R | Primer3: not found at this Tm | N.d. | 0.06 |
| mm4_intergenic_Gm23642|Lrfn2_chr17_48911944_F | Primer3: not found at this Tm | N.d. | 0.06 |
| mm4_intergenic_Gm23642|Lrfn2_chr17_48911944_R | Primer3: not found at this Tm | N.d. | 0.06 |
| mm4_intergenic_Gm24132|Gm25160_chr8_96728242_F | TCGTCGGCAGCGTCAGGCCTACTAGATGGTTTCCA | 57.8 | 0.06 |
| mm4_intergenic_Gm24132|Gm25160_chr8_96728242_R | GTCTCGTGGGCTCGGATTTTAGTGTCCCTGGCCCC | 59.6 | 0.06 |
| mm4_intron_Gabrg3_chr7_57027555_F | Primer3: not found at this Tm | N.d. | 0.06 |
| mm4_intron_Gabrg3_chr7_57027555_R | Primer3: not found at this Tm | N.d. | 0.06 |
| mm4_intergenic_Camk2n1|Vwa5b1_chr4_138516640_F | TCGTCGGCAGCGTCGGTGAGATCATTGGTGGCCA | 60.0 | 0.06 |
| mm4_intergenic_Camk2n1|Vwa5b1_chr4_138516640_R | GTCTCGTGGGCTCGGCATACTGGGCCACACCTCTG | 60.1 | 0.06 |
| mm4_exon_Reps2_chrX_162416457_F | TCGTCGGCAGCGTCACAGCCAAGGATTGTTGCAG | 59.0 | 0.06 |
| mm4_exon_Reps2_chrX_162416457_R | GTCTCGTGGGCTCGGAGCTTGGAAACCACCCAACA | 60.0 | 0.06 |
| mm4_intron_Kirrel_chr3_87097582_F | Primer3: not found at this Tm | N.d. | 0.06 |
| mm4_intron_Kirrel_chr3_87097582_R | Primer3: not found at this Tm | N.d. | 0.06 |
| mm4_intron_Sun1_chr5_139223404_F | Primer3: not found at this Tm | N.d. | 0.05 |
| mm4_intron_Sun1_chr5_139223404_R | Primer3: not found at this Tm | N.d. | 0.05 |
| mm4_intron_Postn_chr3_54364662_F | TCGTCGGCAGCGTCTGTGCTTTCTGTGAACAAAACCT | 59.4 | 0.05 |
| mm4_intron_Postn_chr3_54364662_R | GTCTCGTGGGCTCGGAAAGTCATGCTGGGGAAGGG | 59.9 | 0.05 |
| mm4_intron_Pkp4_chr2_59245364_F | Primer3: not found at this Tm | N.d. | 0.05 |
| mm4_intron_Pkp4_chr2_59245364_R | Primer3: not found at this Tm | N.d. | 0.05 |
| mm3_intergenic_Crisp4|Defb44-ps_chr1_18191408_F | Primer3: not found at this Tm | N.d. | 0.05 |
| mm3_intergenic_Crisp4|Defb44-ps_chr1_18191408_R | Primer3: not found at this Tm | N.d. | 0.05 |
| mm4_intergenic_Ulk4|Trak1_chr9_121302153_F | Primer3: not found at this Tm | N.d. | 0.05 |
| mm4_intergenic_Ulk4|Trak1_chr9_121302153_R | Primer3: not found at this Tm | N.d. | 0.05 |
| mm4_intergenic_Sall1|Gm6625_chr8_89076014_F | TCGTCGGCAGCGTCGGGCGGCCATAGCATATCTA | 59.1 | 0.05 |
| mm4_intergenic_Sall1|Gm6625_chr8_89076014_R | GTCTCGTGGGCTCGGTTGCCTCTCTGCTTCAAGGT | 59.2 | 0.05 |
| mm4_exon_Trim29_chr9_43311226_F | Primer3: not found at this Tm | N.d. | 0.05 |
| mm4_exon_Trim29_chr9_43311226_R | Primer3: not found at this Tm | N.d. | 0.05 |
| mm4_intron_Cntnap5b_chr1_100038514_F | TCGTCGGCAGCGTCTGTGTGAACAAGTTTACCCAGTG | 59.3 | 0.05 |
| mm4_intron_Cntnap5b_chr1_100038514_R | GTCTCGTGGGCTCGGATGCTTCCTCCACAGGCATT | 59.6 | 0.05 |
| mm4_intergenic_Gm26253|Rab1_chr11_20200928_F | TCGTCGGCAGCGTCTTAGAGCAGCCTCAGACCCT | 59.9 | 0.04 |
| mm4_intergenic_Gm26253|Rab1_chr11_20200928_R | GTCTCGTGGGCTCGGTGAGGAGGGGTGGAGACAG | 59.9 | 0.04 |
| mm4_intergenic_Zcchc16|Gm25097_chrX_145151586_F | Primer3: not found at this Tm | N.d. | 0.04 |
| mm4_intergenic_Zcchc16|Gm25097_chrX_145151586_R | Primer3: not found at this Tm | N.d. | 0.04 |
| mm4_intergenic_Gm23892|Gm25382_chr10_16294078_F | Primer3: not found at this Tm | N.d. | 0.04 |
| mm4_intergenic_Gm23892|Gm25382_chr10_16294078_R | Primer3: not found at this Tm | N.d. | 0.04 |
| mm4_intergenic_Gm25621|Rpl32-ps_chr3_69692534_F | Primer3: not found at this Tm | N.d. | 0.04 |
| mm4_intergenic_Gm25621|Rpl32-ps_chr3_69692534_R | Primer3: not found at this Tm | N.d. | 0.04 |
| mm4_intergenic_Mkx|Armc4_chr18_7027090_F | Primer3: not found at this Tm | N.d. | 0.04 |
| mm4_intergenic_Mkx|Armc4_chr18_7027090_R | Primer3: not found at this Tm | N.d. | 0.04 |
| mm4_intergenic_Gm13812|Gm13810_chr2_100585198_F | Primer3: not found at this Tm | N.d. | 0.04 |
| mm4_intergenic_Gm13812|Gm13810_chr2_100585198_R | Primer3: not found at this Tm | N.d. | 0.04 |
| mm4_intergenic_Gm13810|B230118H07Rik_chr2_100728380_F | Primer3: not found at this Tm | N.d. | 0.04 |
| mm4_intergenic_Gm13810|B230118H07Rik_chr2_100728380_R | Primer3: not found at this Tm | N.d. | 0.04 |
| mm4_intergenic_Ftmt|Srfbp1_chr18_52385904_F | Primer3: not found at this Tm | N.d. | 0.04 |
| mm4_intergenic_Ftmt|Srfbp1_chr18_52385904_R | Primer3: not found at this Tm | N.d. | 0.04 |
| mm4_intergenic_Unc5b|mmu-mir-6408_chr10_60859317_F | Primer3: not found at this Tm | N.d. | 0.04 |
| mm4_intergenic_Unc5b|mmu-mir-6408_chr10_60859317_R | Primer3: not found at this Tm | N.d. | 0.04 |
| mm4_intergenic_4933413G19Rik|Nrip2_chr6_128393461_F | TCGTCGGCAGCGTCCAGGGCAGTGTCCTCTCTTG | 60.0 | 0.04 |
| mm4_intergenic_4933413G19Rik|Nrip2_chr6_128393461_R | GTCTCGTGGGCTCGGTCCGCTGAAGGCATGAATGA | 59.7 | 0.04 |
| mm4_intergenic_Gm16401/Prom1|Tapt1_chr5_44128377_F | Primer3: not found at this Tm | N.d. | 0.04 |
| mm4_intergenic_Gm16401/Prom1|Tapt1_chr5_44128377_R | Primer3: not found at this Tm | N.d. | 0.04 |
| mm4_intron_Prkd1_chr12_50639115_F | TCGTCGGCAGCGTCTTTCCCACCTGTCCAAGTGG | 59.8 | 0.04 |
| mm4_intron_Prkd1_chr12_50639115_R | GTCTCGTGGGCTCGGACCTCAGGCTTTTGGATTCCA | 59.5 | 0.04 |
| mm4_intron_Gm15545_chr7_44990572_F | Primer3: not found at this Tm | N.d. | 0.03 |
| mm4_intron_Gm15545_chr7_44990572_R | Primer3: not found at this Tm | N.d. | 0.03 |
| mm4_intron_Abca4_chr3_122139964_F | TCGTCGGCAGCGTCGTCCTGGGTCAATCCTGCTC | 60.1 | 0.03 |
| mm4_intron_Abca4_chr3_122139964_R | GTCTCGTGGGCTCGGTGTGCATGGAGGTCTGATGG | 59.7 | 0.03 |
| mm4_intergenic_AI467606|Qprt_chr7_127106971_F | Primer3: not found at this Tm | N.d. | 0.03 |
| mm4_intergenic_AI467606|Qprt_chr7_127106971_R | Primer3: not found at this Tm | N.d. | 0.03 |
| mm4_exon_Ndrg3_chr2_156935364_F | TCGTCGGCAGCGTCAATGGACGGATGGACAGACG | 59.8 | 0.03 |
| mm4_exon_Ndrg3_chr2_156935364_R | GTCTCGTGGGCTCGGCAGGCCATCATCCCCGATTT | 60.1 | 0.03 |
| mm4_intergenic_Gm12126|Tenm2_chr11_36096384_F | TCGTCGGCAGCGTCCTGGCCTCTCTCCAATTCCC | 59.8 | 0.03 |
| mm4_intergenic_Gm12126|Tenm2_chr11_36096384_R | GTCTCGTGGGCTCGGAATAGCGAGGCGTTCTCTGC | 60.5 | 0.03 |
| mm4_intron_Ifi27_chr12_103434700_F | Primer3: not found at this Tm | N.d. | 0.03 |
| mm4_intron_Ifi27_chr12_103434700_R | Primer3: not found at this Tm | N.d. | 0.03 |
| mm4_intergenic_Calb2|Cmtr2_chr8_110168332_F | Primer3: not found at this Tm | N.d. | 0.03 |
| mm4_intergenic_Calb2|Cmtr2_chr8_110168332_R | Primer3: not found at this Tm | N.d. | 0.03 |
| mm4_intergenic_Gm26166|Tsc22d2_chr3_58377384_F | Primer3: not found at this Tm | N.d. | 0.03 |
| mm4_intergenic_Gm26166|Tsc22d2_chr3_58377384_R | Primer3: not found at this Tm | N.d. | 0.03 |
| mm4_intergenic_Gm14055|Gm14064_chr2_137375075_F | TCGTCGGCAGCGTCGGCTTTAGAACCCAGCTCCA | 59.6 | 0.03 |
| mm4_intergenic_Gm14055|Gm14064_chr2_137375075_R | GTCTCGTGGGCTCGGTCTGGAAAGCCCCATCCCTA | 59.9 | 0.03 |
| mm4_intron_Prmt3_chr7_49824514_F | TCGTCGGCAGCGTCCAACAGCCTTGAAGTCGCAC | 60.0 | 0.03 |
| mm4_intron_Prmt3_chr7_49824514_R | GTCTCGTGGGCTCGGAAAGCCTTGTCCCCAACACA | 60.0 | 0.03 |
| mm4_intergenic_Sept6|Gm14542_chrX_37034370_F | Primer3: not found at this Tm | N.d. | 0.03 |
| mm4_intergenic_Sept6|Gm14542_chrX_37034370_R | Primer3: not found at this Tm | N.d. | 0.03 |
| mm4_intron_Alg5_chr3_54748240_F | TCGTCGGCAGCGTCGCCTTCCAGGATAGGCTTCC | 59.8 | 0.03 |
| mm4_intron_Alg5_chr3_54748240_R | GTCTCGTGGGCTCGGCACTCACAGCTGCTTCTCCA | 59.9 | 0.03 |
| mm4_intron_Kcnab1_chr3_65301674_F | Primer3: not found at this Tm | N.d. | 0.03 |
| mm4_intron_Kcnab1_chr3_65301674_R | Primer3: not found at this Tm | N.d. | 0.03 |
| mm4_intergenic_Cadm1|Nxpe2_chr9_47905177_F | TCGTCGGCAGCGTCAATCCGTCCTGCCTTGAGTG | 60.0 | 0.02 |
| mm4_intergenic_Cadm1|Nxpe2_chr9_47905177_R | GTCTCGTGGGCTCGGACAAGGTCTTGCTCCTGGTG | 59.8 | 0.02 |
| mm4_intron_Nt5c3_chr6_56904439_F | Primer3: not found at this Tm | N.d. | 0.02 |
| mm4_intron_Nt5c3_chr6_56904439_R | Primer3: not found at this Tm | N.d. | 0.02 |
| mm4_intron_Tenm3_chr8_48258150_F | Primer3: not found at this Tm | N.d. | 0.02 |
| mm4_intron_Tenm3_chr8_48258150_R | Primer3: not found at this Tm | N.d. | 0.02 |
| mm4_intron_Fras1_chr5_96680285_F | Primer3: not found at this Tm | N.d. | 0.02 |
| mm4_intron_Fras1_chr5_96680285_R | Primer3: not found at this Tm | N.d. | 0.02 |
| mm4_exon_Itpr2_chr6_146296726_F | Primer3: not found at this Tm | N.d. | 0.02 |
| mm4_exon_Itpr2_chr6_146296726_R | Primer3: not found at this Tm | N.d. | 0.02 |
| mm4_intergenic_Thrsp|Kctd14_chr7_97430100_F | Primer3: not found at this Tm | N.d. | 0.02 |
| mm4_intergenic_Thrsp|Kctd14_chr7_97430100_R | Primer3: not found at this Tm | N.d. | 0.02 |
| mm4_intergenic_2310015A10Rik|Actn1_chr12_80137741_F | TCGTCGGCAGCGTCCCCTTCCTCACGTCTTGTCC | 60.0 | 0.02 |
| mm4_intergenic_2310015A10Rik|Actn1_chr12_80137741_R | GTCTCGTGGGCTCGGATTGAACGTCCCTCTGCTGG | 60.0 | 0.02 |
| mm4_intergenic_Dnah2|Efnb3_chr11_69553620_F | Primer3: not found at this Tm | N.d. | 0.02 |
| mm4_intergenic_Dnah2|Efnb3_chr11_69553620_R | Primer3: not found at this Tm | N.d. | 0.02 |
| mm4_intergenic_Gm4812|Papd7_chr13_69415080_F | Primer3: not found at this Tm | N.d. | 0.02 |
| mm4_intergenic_Gm4812|Papd7_chr13_69415080_R | Primer3: not found at this Tm | N.d. | 0.02 |
| mm4_intergenic_4930564D02Rik|1700095B22Rik_chr3_105180383_F | Primer3: not found at this Tm | N.d. | 0.02 |
| mm4_intergenic_4930564D02Rik|1700095B22Rik_chr3_105180383_R | Primer3: not found at this Tm | N.d. | 0.02 |
| mm4_intergenic_Gm8644|Gm15171_chrX_157657618_F | Primer3: not found at this Tm | N.d. | 0.02 |
| mm4_intergenic_Gm8644|Gm15171_chrX_157657618_R | Primer3: not found at this Tm | N.d. | 0.02 |
| mm4_intergenic_Gm9621|Gm24200_chr9_94181709_F | Primer3: not found at this Tm | N.d. | 0.02 |
| mm4_intergenic_Gm9621|Gm24200_chr9_94181709_R | Primer3: not found at this Tm | N.d. | 0.02 |
| mm4_intergenic_Anapc10|Hhip_chr8_79789797_F | Primer3: not found at this Tm | N.d. | 0.02 |
| mm4_intergenic_Anapc10|Hhip_chr8_79789797_R | Primer3: not found at this Tm | N.d. | 0.02 |
| mm4_intron_Xylt1_chr7_117642511_F | Primer3: not found at this Tm | N.d. | 0.02 |
| mm4_intron_Xylt1_chr7_117642511_R | Primer3: not found at this Tm | N.d. | 0.02 |
| mm4_exon_Mrto4_chr4_139352453_F | TCGTCGGCAGCGTCCGCCCAGTGTCCTGAAGG | 60.0 | 0.02 |
| mm4_exon_Mrto4_chr4_139352453_R | GTCTCGTGGGCTCGGAGCCATAGAGAGGAACCGGT | 60.0 | 0.02 |
| mm4_intergenic_Caln1|Gm23761_chr5_130747305_F | Primer3: not found at this Tm | N.d. | 0.02 |
| mm4_intergenic_Caln1|Gm23761_chr5_130747305_R | Primer3: not found at this Tm | N.d. | 0.02 |
| mm4_intergenic_Krt35|Krt36_chr11_100097139_F | Primer3: not found at this Tm | N.d. | 0.02 |
| mm4_intergenic_Krt35|Krt36_chr11_100097139_R | Primer3: not found at this Tm | N.d. | 0.02 |
| mm4_intergenic_Cbx3|Snx10_chr6_51512221_F | Primer3: not found at this Tm | N.d. | 0.02 |
| mm4_intergenic_Cbx3|Snx10_chr6_51512221_R | Primer3: not found at this Tm | N.d. | 0.02 |
| mm4_intron_Clec3b_chr9_123156301_F | Primer3: not found at this Tm | N.d. | 0.01 |
| mm4_intron_Clec3b_chr9_123156301_R | Primer3: not found at this Tm | N.d. | 0.01 |
| mm4_intergenic_Tmem173|Gm16490_chr18_35752293_F | Primer3: not found at this Tm | N.d. | 0.01 |
| mm4_intergenic_Tmem173|Gm16490_chr18_35752293_R | Primer3: not found at this Tm | N.d. | 0.01 |
| mm3_intergenic_Gm9800|Fhit_chr14_9439771_F | Primer3: not found at this Tm | N.d. | 0.01 |
| mm3_intergenic_Gm9800|Fhit_chr14_9439771_R | Primer3: not found at this Tm | N.d. | 0.01 |
| mm3_intron_Hydin_chr8_110313247_F | TCGTCGGCAGCGTCTCACATTCAGCCTTCAGAGCA | 59.6 | 0.01 |
| mm3_intron_Hydin_chr8_110313247_R | GTCTCGTGGGCTCGGGCAGATCTCTGGCGTTAGCT | 59.8 | 0.01 |
| mm4_intergenic_Ninj1|1110007C09Rik_chr13_49199861_F | TCGTCGGCAGCGTCGCTCACAGGTCTTTGAGGCA | 60.2 | 0.01 |
| mm4_intergenic_Ninj1|1110007C09Rik_chr13_49199861_R | GTCTCGTGGGCTCGGTGTCAGTCAAAGGCTGGGAA | 59.1 | 0.01 |
| mm4_intron_Tspan18_chr2_93215974_F | TCGTCGGCAGCGTCCAGGGTTCAGGGCACACTTA | 59.6 | 0.01 |
| mm4_intron_Tspan18_chr2_93215974_R | GTCTCGTGGGCTCGGTAATGGGCCCATCTCTGCAG | 59.5 | 0.01 |
| mm4_intergenic_Rnf220|Gm12828_chr4_117427390_F | TCGTCGGCAGCGTCTAAGCAAGAGAAGGGCAGCC | 60.0 | 0.01 |
| mm4_intergenic_Rnf220|Gm12828_chr4_117427390_R | GTCTCGTGGGCTCGGTTCACGGACTGTTCGATCCC | 59.7 | 0.01 |
| mm4_intron_Gli2_chr1_118864994_F | TCGTCGGCAGCGTCGCACCAGCCTAGAGTTTGGT | 59.9 | 0.01 |
| mm4_intron_Gli2_chr1_118864994_R | GTCTCGTGGGCTCGGTACCTGGCAACCCTAGAGCT | 59.9 | 0.01 |
| mm4_intergenic_Obscn|Iba57_chr11_59138989_F | Primer3: not found at this Tm | N.d. | 0.01 |
| mm4_intergenic_Obscn|Iba57_chr11_59138989_R | Primer3: not found at this Tm | N.d. | 0.01 |
| mm4_intergenic_Tshz3|Zfp536_chr7_37148399_F | Primer3: not found at this Tm | N.d. | 0.01 |
| mm4_intergenic_Tshz3|Zfp536_chr7_37148399_R | Primer3: not found at this Tm | N.d. | 0.01 |
| mm4_intron_Polk_chr13_96500953_F | Primer3: not found at this Tm | N.d. | 0.01 |
| mm4_intron_Polk_chr13_96500953_R | Primer3: not found at this Tm | N.d. | 0.01 |
| mm4_intergenic_Prodh|Rtn4r_chr16_18122733_F | TCGTCGGCAGCGTCCTCCCTTGGGCTTAGGTTCC | 59.7 | 0.01 |
| mm4_intergenic_Prodh|Rtn4r_chr16_18122733_R | GTCTCGTGGGCTCGGGCCATTCGATCCTCTGGGAG | 59.9 | 0.01 |
| mm4_intergenic_Gata6|Rbbp8_chr18_11352925_F | TCGTCGGCAGCGTCTCTGTTTCAGCACAGGCCAA | 60.1 | 0.01 |
| mm4_intergenic_Gata6|Rbbp8_chr18_11352925_R | GTCTCGTGGGCTCGGGGTGCCAGAGGGGAAAGAAG | 60.3 | 0.01 |
| mm4_intron_Cdc42bpg_chr19_6313094_F | TCGTCGGCAGCGTCCCCATTGCTGTCCAAGGTCA | 60.2 | 0.01 |
| mm4_intron_Cdc42bpg_chr19_6313094_R | GTCTCGTGGGCTCGGAAACACCCTGGCACATCGAT | 59.9 | 0.01 |
| mm4_intergenic_Gm24235|Gm25513_chr5_54828266_F | Primer3: not found at this Tm | N.d. | 0.01 |
| mm4_intergenic_Gm24235|Gm25513_chr5_54828266_R | Primer3: not found at this Tm | N.d. | 0.01 |
| mm4_intron_Ablim1_chr19_57306097_F | Primer3: not found at this Tm | N.d. | 0.01 |
| mm4_intron_Ablim1_chr19_57306097_R | Primer3: not found at this Tm | N.d. | 0.01 |
| mm4_intergenic_Gm22277|Lrrc30_chr17_67605807_F | Primer3: not found at this Tm | N.d. | 0.01 |
| mm4_intergenic_Gm22277|Lrrc30_chr17_67605807_R | Primer3: not found at this Tm | N.d. | 0.01 |
| mm4_intergenic_Prr18|Sft2d1/T2_chr17_8369910_F | Primer3: not found at this Tm | N.d. | 0.01 |
| mm4_intergenic_Prr18|Sft2d1/T2_chr17_8369910_R | Primer3: not found at this Tm | N.d. | 0.01 |
| mm2_intergenic_Gm5257|mmu-mir-6343_chr1_75853954_F | Primer3: not found at this Tm | N.d. | 0.01 |
| mm2_intergenic_Gm5257|mmu-mir-6343_chr1_75853954_R | Primer3: not found at this Tm | N.d. | 0.01 |
| mm2_intron_Creb5_chr6_53687839_F | TCGTCGGCAGCGTCGCAGACACAGGTCAGACACA | 59.8 | 0.00 |
| mm2_intron_Creb5_chr6_53687839_R | GTCTCGTGGGCTCGGGGGCATCTTTCTGTGTGGCT | 60.6 | 0.00 |
| mm4_intron_Usf2_chr7_30952267_F | TCGTCGGCAGCGTCCTCTGCAACCCACCCTACAG | 60.0 | 0.00 |
| mm4_intron_Usf2_chr7_30952267_R | GTCTCGTGGGCTCGGGCAGGGTGACTTTCAGAGCT | 59.9 | 0.00 |
| mm4_intron_Eif3f_chr7_108941367_F | Primer3: not found at this Tm | N.d. | 0.00 |
| mm4_intron_Eif3f_chr7_108941367_R | Primer3: not found at this Tm | N.d. | 0.00 |
| mm4_exon_Ctf1/Ctf2_chr7_127717363_F | Primer3: not found at this Tm | N.d. | 0.00 |
| mm4_exon_Ctf1/Ctf2_chr7_127717363_R | Primer3: not found at this Tm | N.d. | 0.00 |
| mm4_intron_Nrg4_chr9_55255777_F | Primer3: not found at this Tm | N.d. | 0.00 |
| mm4_intron_Nrg4_chr9_55255777_R | Primer3: not found at this Tm | N.d. | 0.00 |
| mm4_intergenic_Sumf1|Gm4604_chr6_108136626_F | TCGTCGGCAGCGTCCAAAGCACCCACTGGCAAAC | 60.5 | 0.00 |
| mm4_intergenic_Sumf1|Gm4604_chr6_108136626_R | GTCTCGTGGGCTCGGTCCTTCCATCTACTTAAAGGGCT | 58.6 | 0.00 |
| mm3_intergenic_Gm25875|Gm23835_chr15_60327500_F | TCGTCGGCAGCGTCAGGGAGCAATTTAGCTGTTGT | 57.8 | 0.00 |
| mm3_intergenic_Gm25875|Gm23835_chr15_60327500_R | GTCTCGTGGGCTCGGGCATTCCAGATCCCGGAGAG | 59.9 | 0.00 |
| mm4_intron_Gm5577_chr6_87982627_F | TCGTCGGCAGCGTCACACCACTAAAGCGTCCAGG | 59.9 | 0.00 |
| mm4_intron_Gm5577_chr6_87982627_R | GTCTCGTGGGCTCGGAAAGGCTGAGAATCTGGGCC | 60.0 | 0.00 |
| mm4_intergenic_Eya1|Msc_chr1_14646911_F | Primer3: not found at this Tm | N.d. | 0.00 |
| mm4_intergenic_Eya1|Msc_chr1_14646911_R | Primer3: not found at this Tm | N.d. | 0.00 |
| mm4_intergenic_Xpr1|Gm5532_chr1_155489478_F | TCGTCGGCAGCGTCTTTCTGCTGCTACGGCGTAT | 59.8 | 0.00 |
| mm4_intergenic_Xpr1|Gm5532_chr1_155489478_R | GTCTCGTGGGCTCGGTGCTACCAGACGCTTCCATG | 60.1 | 0.00 |
| mm4_intergenic_Gm12983|Gm12984_chr4_135295983_F | Primer3: not found at this Tm | N.d. | 0.00 |
| mm4_intergenic_Gm12983|Gm12984_chr4_135295983_R | Primer3: not found at this Tm | N.d. | 0.00 |
| mm4_intron_Pex14_chr4_149049087_F | Primer3: not found at this Tm | N.d. | 0.00 |
| mm4_intron_Pex14_chr4_149049087_R | Primer3: not found at this Tm | N.d. | 0.00 |
| mm3_exon_C2cd5_chr6_143011925_F | Primer3: not found at this Tm | N.d. | 0.00 |
| mm3_exon_C2cd5_chr6_143011925_R | Primer3: not found at this Tm | N.d. | 0.00 |
| mm4_intergenic_Gm22805|Gm4791_chr9_46736575_F | Primer3: not found at this Tm | N.d. | 0.00 |
| mm4_intergenic_Gm22805|Gm4791_chr9_46736575_R | Primer3: not found at this Tm | N.d. | 0.00 |
| mm4_intron_Pls1_chr9_95795529_F | Primer3: not found at this Tm | N.d. | 0.00 |
| mm4_intron_Pls1_chr9_95795529_R | Primer3: not found at this Tm | N.d. | 0.00 |
| mm4_intergenic_Gm23848|Trps1_chr15_50501341_F | Primer3: not found at this Tm | N.d. | 0.00 |
| mm4_intergenic_Gm23848|Trps1_chr15_50501341_R | Primer3: not found at this Tm | N.d. | 0.00 |
| mm4_intron_Soga2_chr17_66367798_F | Primer3: not found at this Tm | N.d. | 0.00 |
| mm4_intron_Soga2_chr17_66367798_R | Primer3: not found at this Tm | N.d. | 0.00 |
| mm4_intron_Slc4a4_chr5_89050915_F | Primer3: not found at this Tm | N.d. | 0.00 |
| mm4_intron_Slc4a4_chr5_89050915_R | Primer3: not found at this Tm | N.d. | 0.00 |
| mm4_intron_Rims4_chr2_163882590_F | Primer3: not found at this Tm | N.d. | 0.00 |
| mm4_intron_Rims4_chr2_163882590_R | Primer3: not found at this Tm | N.d. | 0.00 |
| mm4_intron_Mest_chr6_30732905_F | Primer3: not found at this Tm | N.d. | 0.00 |
| mm4_intron_Mest_chr6_30732905_R | Primer3: not found at this Tm | N.d. | 0.00 |
| mm4_intron_Mcc_chr18_44436036_F | Primer3: not found at this Tm | N.d. | 0.00 |
| mm4_intron_Mcc_chr18_44436036_R | Primer3: not found at this Tm | N.d. | 0.00 |
| mm4_intron_Lrfn2_chr17_49033585_F | Primer3: not found at this Tm | N.d. | 0.00 |
| mm4_intron_Lrfn2_chr17_49033585_R | Primer3: not found at this Tm | N.d. | 0.00 |
| mm4_intron_Kidins220_chr12_25014563_F | TCGTCGGCAGCGTCCACCTCCCTTTCCCTGGAAC | 59.9 | 0.00 |
| mm4_intron_Kidins220_chr12_25014563_R | GTCTCGTGGGCTCGGCTGGGAGGACTGGAGGAAGA | 59.9 | 0.00 |
| mm4_intron_Fras1_chr5_96717529_F | Primer3: not found at this Tm | N.d. | 0.00 |
| mm4_intron_Fras1_chr5_96717529_R | Primer3: not found at this Tm | N.d. | 0.00 |
| mm4_intron_Fam214a_chr9_74990964_F | Primer3: not found at this Tm | N.d. | 0.00 |
| mm4_intron_Fam214a_chr9_74990964_R | Primer3: not found at this Tm | N.d. | 0.00 |
| mm4_intron_Dnajc21_chr15_10468335_F | Primer3: not found at this Tm | N.d. | 0.00 |
| mm4_intron_Dnajc21_chr15_10468335_R | Primer3: not found at this Tm | N.d. | 0.00 |
| mm4_intron_Calb2_chr8_110154622_F | TCGTCGGCAGCGTCTGTTACAACCTCAGCCGGAC | 59.9 | 0.00 |
| mm4_intron_Calb2_chr8_110154622_R | GTCTCGTGGGCTCGGATTGAGATGGCGGAGGTGAG | 59.5 | 0.00 |
| mm4_intron_Cabp5_chr7_13403152_F | Primer3: not found at this Tm | N.d. | 0.00 |
| mm4_intron_Cabp5_chr7_13403152_R | Primer3: not found at this Tm | N.d. | 0.00 |
| mm4_intron_Atp8a2_chr14_59758974_F | Primer3: not found at this Tm | N.d. | 0.00 |
| mm4_intron_Atp8a2_chr14_59758974_R | Primer3: not found at this Tm | N.d. | 0.00 |
| mm4_intergenic_Tnfrsf19|Sacs_chr14_61071971_F | Primer3: not found at this Tm | N.d. | 0.00 |
| mm4_intergenic_Tnfrsf19|Sacs_chr14_61071971_R | Primer3: not found at this Tm | N.d. | 0.00 |
| mm4_intergenic_Tln2|mmu-mir-7241_chr9_67611311_F | Primer3: not found at this Tm | N.d. | 0.00 |
| mm4_intergenic_Tln2|mmu-mir-7241_chr9_67611311_R | Primer3: not found at this Tm | N.d. | 0.00 |
| mm4_intergenic_Tbc1d22a|Gm23416_chr15_86746464_F | Primer3: not found at this Tm | N.d. | 0.00 |
| mm4_intergenic_Tbc1d22a|Gm23416_chr15_86746464_R | Primer3: not found at this Tm | N.d. | 0.00 |
| mm4_intergenic_Pcdh18|Slc7a11_chr3_49903557_F | Primer3: not found at this Tm | N.d. | 0.00 |
| mm4_intergenic_Pcdh18|Slc7a11_chr3_49903557_R | Primer3: not found at this Tm | N.d. | 0.00 |
| mm4_intergenic_Npas3|Egln3_chr12_54166396_F | TCGTCGGCAGCGTCATGGGATGGCCTTCTCCTCA | 60.3 | 0.00 |
| mm4_intergenic_Npas3|Egln3_chr12_54166396_R | GTCTCGTGGGCTCGGCTATTGGAAGGTCCTGCCCG | 60.1 | 0.00 |
| mm4_intergenic_Notch1|Gm13358_chr2_26538817_F | TCGTCGGCAGCGTCGCAGAGGAGTGGAGGGAAGA | 60.6 | 0.00 |
| mm4_intergenic_Notch1|Gm13358_chr2_26538817_R | GTCTCGTGGGCTCGGTCAGGCAGGGGAATTTGCAT | 59.9 | 0.00 |
| mm4_intergenic_Mir3095|Gm12577_chr4_58468539_F | TCGTCGGCAGCGTCAGAGGATGGCCCACTCCTTA | 59.6 | 0.00 |
| mm4_intergenic_Mir3095|Gm12577_chr4_58468539_R | GTCTCGTGGGCTCGGCGGGAAGAGATAGAACACAATGC | 59.4 | 0.00 |
| mm4_intergenic_Hp|Dhodh_chr8_109587370_F | Primer3: not found at this Tm | N.d. | 0.00 |
| mm4_intergenic_Hp|Dhodh_chr8_109587370_R | Primer3: not found at this Tm | N.d. | 0.00 |
| mm4_intergenic_H19/H19_1/Mir675/H19_2|Igf2_chr7_142594444_F | Primer3: not found at this Tm | N.d. | 0.00 |
| mm4_intergenic_H19/H19_1/Mir675/H19_2|Igf2_chr7_142594444_R | Primer3: not found at this Tm | N.d. | 0.00 |
| mm4_intergenic_Gm9726/mmu-mir-8099-2|Gm26055_chr12_95093683_F | Primer3: not found at this Tm | N.d. | 0.00 |
| mm4_intergenic_Gm9726/mmu-mir-8099-2|Gm26055_chr12_95093683_R | Primer3: not found at this Tm | N.d. | 0.00 |
| mm4_intergenic_Gm7488|Tbl1xr1_chr3_21360265_F | TCGTCGGCAGCGTCTCATGGTAGTTGCCCAGCAA | 59.5 | 0.00 |
| mm4_intergenic_Gm7488|Tbl1xr1_chr3_21360265_R | GTCTCGTGGGCTCGGCCCCATAGAAGAGACCAGGC | 59.2 | 0.00 |
| mm4_intergenic_Gm5909|Gypa_chr8_80368306_F | Primer3: not found at this Tm | N.d. | 0.00 |
| mm4_intergenic_Gm5909|Gypa_chr8_80368306_R | Primer3: not found at this Tm | N.d. | 0.00 |
| mm4_intergenic_Gm26989|Vgf_chr5_137028279_F | TCGTCGGCAGCGTCCCTCTCTGAACCACCAGCTT | 59.3 | 0.00 |
| mm4_intergenic_Gm26989|Vgf_chr5_137028279_R | GTCTCGTGGGCTCGGACCCTCCTTCCCTTTTCCCT | 60.1 | 0.00 |
| mm4_intergenic_Gm23847|Fgfr2_chr7_130097414_F | Primer3: not found at this Tm | N.d. | 0.00 |
| mm4_intergenic_Gm23847|Fgfr2_chr7_130097414_R | Primer3: not found at this Tm | N.d. | 0.00 |
| mm4_intergenic_Gm23465|Vtcn1_chr3_100742299_F | Primer3: not found at this Tm | N.d. | 0.00 |
| mm4_intergenic_Gm23465|Vtcn1_chr3_100742299_R | Primer3: not found at this Tm | N.d. | 0.00 |
| mm4_intergenic_Gm22777|Spock1_chr13_57164908_F | Primer3: not found at this Tm | N.d. | 0.00 |
| mm4_intergenic_Gm22777|Spock1_chr13_57164908_R | Primer3: not found at this Tm | N.d. | 0.00 |
| mm4_intergenic_Gm22494|Chrna7_chr7_62718083_F | Primer3: not found at this Tm | N.d. | 0.00 |
| mm4_intergenic_Gm22494|Chrna7_chr7_62718083_R | Primer3: not found at this Tm | N.d. | 0.00 |
| mm4_intergenic_Gm15011|Rbm41_chrX_139942004_F | TCGTCGGCAGCGTCCAAGGAGGAGGTAAGGCTGC | 60.1 | 0.00 |
| mm4_intergenic_Gm15011|Rbm41_chrX_139942004_R | GTCTCGTGGGCTCGGGAAGGAGCCACCCTGGTTAC | 60.0 | 0.00 |
| mm4_intergenic_Gm12210|Gm11187_chr11_52536080_F | TCGTCGGCAGCGTCTGGAGTGGGGAAAATGGCTG | 60.2 | 0.00 |
| mm4_intergenic_Gm12210|Gm11187_chr11_52536080_R | GTCTCGTGGGCTCGGTCATTGCTTTCCCTCCCAGC | 60.3 | 0.00 |
| mm4_intergenic_Barx1|Phf2_chr13_48756890_F | TCGTCGGCAGCGTCGCTTGAGGGTTGGCTGTGTA | 60.2 | 0.00 |
| mm4_intergenic_Barx1|Phf2_chr13_48756890_R | GTCTCGTGGGCTCGGCGGTGTGTTTAACGTCAGCG | 60.1 | 0.00 |
| mm4_exon_Fgd3_chr13_49296769_F | Primer3: not found at this Tm | N.d. | 0.00 |
| mm4_exon_Fgd3_chr13_49296769_R | Primer3: not found at this Tm | N.d. | 0.00 |
| mm4_exon_Brsk2_chr7_142002978_F | TCGTCGGCAGCGTCTAAAAGACCTGGGTGCTCCA | 58.5 | 0.00 |
| mm4_exon_Brsk2_chr7_142002978_R | GTCTCGTGGGCTCGGGCTGCTGCTACTCCTCCTTC | 60.1 | 0.00 |
| mm4_exon_Acvr1_chr2_58447380_F | Primer3: not found at this Tm | N.d. | 0.00 |
| mm4_exon_Acvr1_chr2_58447380_R | Primer3: not found at this Tm | N.d. | 0.00 |
| mm3_intergenic_Lrrc7|Gm9423_chr3_158714548_F | TCGTCGGCAGCGTCACCAAGATAATCCTGTGTTCCA | 57.0 | 0.00 |
| mm3_intergenic_Lrrc7|Gm9423_chr3_158714548_R | GTCTCGTGGGCTCGGGCCAATTACTAGTGACCATGGC | 59.3 | 0.00 |
| mm3_intergenic_Cdh9|Gm22032_chr15_17131972_F | Primer3: not found at this Tm | N.d. | 0.00 |
| mm3_intergenic_Cdh9|Gm22032_chr15_17131972_R | Primer3: not found at this Tm | N.d. | 0.00 |
These only list off-targets that have primers in the table above. Primers underlined, off-targets in bold.
| ontarget_mm0_exon_5730457N03Rik/Evx1_chr6_52313759 |
CTGCCTTGTCGCCTTAGCTCCTCTTCTCAGCCAAGATCCCAGGGAGCCTGGGATTAGGAGCTTACTTGGGGGTTTTCCCC CTCCCCCCCTCTGGAGAGTCCGGGGATGGAGAGCCGAAAGGAC |
| mm3_intergenic_Nup93|Mir138-2_chr8_94315245 |
GTGCTGCTGTTCTCTGGAGTAGTCTTTGAGGTCATCTAGCCTCACACCAGCCCTCATTCCTCAGCCAAGATCCCAGGAGA TTAATCTGCTGGTGTACGTTCCAGAGACGG |
| mm4_intergenic_n-R5s193|Spsb1_chr4_149856420 |
CGGTGACTTGCAGCTGACTATGGCTGGGAGTTGGAGGGTGGCCTAGAGCCGGGGCTGGATCCTGCCTGGGATCTTGTCTG AGGAGCCGCCATGTGCTGTCAGGTCTCAGAGCCAGTGTCT |
| mm3_intergenic_Gm25818|Creb5_chr6_53435031 |
AATGCAGTTCCGAACCACCTCCTTGCCTCCTGCCCAGGAATTTTGGCTGAAAAGAGACTTGTGCTCAGTCTGGTGATGGC TT |
| mm3_intergenic_Sema3e|Pclo_chr5_14386651 |
TGTTACGGATTTCCAACCGCGTCTTCTTAGCCAAGATTCCCGGGCTGATGCTTGCACAACCTGCAGGATTACCTGCGAGG AGCAGGAGATGGAGGGATGCCGGGGTTCTTCCCCGACCCCAGGGTCATAGCTGCTAGC |
| mm3_intergenic_Gm5046|Gm23907_chr15_65313530 |
CTTTGCATGTGTGGAAGGGCACACCTGGGATCATGGATGAGAAGGGGAAGATATGGAAACAAACAAATTTGCATGAAAAT GCACAACGAATCAAAGTACTGT |
| mm4_intron_Piezo2_chr18_63217413 |
CTGAGGGAAAGAGCCAGTGGCAGAAACTATCTTACTATCTTTTGCCTTTTCAGCCAAGATCTCTGGTCATCAGTAGATAT TGCTTATGTCCTTGGCTATTTCTTCATCTGGGAGGGGGCAGTTTGCTGGAAATGCA |
| mm3_intron_Agk_chr6_40347787 |
ACCCTGAATCTGGAATAGCCCCCAGGGATCTTGGTTCAGAACAGATTTTACCTCTGAAAGTCAAGTCTTGTTAAAATTGT TTTCTTCTGCTTTTAAAGCCCATGTCACTAACATAGCTGATTCCTAGCACTGCACTGCC |
| mm4_exon_Lrrc4_chr6_28831642 |
TGCACAGTTACCTGCCACAAGAGCTTCATGGTGTGGCACGTTCATAATTCACCATCGCCTGGGATTTTGGCTTGGAAAAG AGAACCAGCCTTACCCCGGCTTAAGTGAGCTAG |
| mm4_intron_Nrxn2_chr19_6511468 |
GCTAGGAGGAAGGCATGGTGTCTGCTATCCTCAGCCAGGACCCCTGGGTAGGTAGAGAGAAAAGCCGTCTGGCATCCCTT GCCTGTAAATCTGGGTATTTTTAAATTTTGGGGTGTTGGAGGTAGG |
| mm4_intergenic_Cpeb2|C1qtnf7_chr5_43435525 |
CCCATATTTCATGACAGCCAACCTGTACAGGACACTCATTTCATACAAGATCCCAGGCTCTTGCTTCCAGACACTGTGCT |
| mm4_intron_Rps6ka1_chr4_133864534 |
TGGACTGGACCTTAGCTGGTTGTGATCCAGATAAAGCCAGCATCCAAAAACCTCGGCAAATACTGTATACTTCACTGAAC AACAGGAATGTCCTTCTCTCATCAAAGATCCCCGGGAGCCAGGGCAGAATCAGTGTCT |
| mm4_intergenic_Itm2b|Med4_chr14_73488926 |
ATGAGGTGGCCAGCTGAAAAGCTCATGCAGAAGGCTTGATTAGCTCAAGTAGTGATGTAACACTTCCCCTCCTTCCAAGG GCCAGGAGCAGATCTTGTCAACTAAGATCCCTGGAGTTGCAGAGTCCTGAGCTTGAGG |
| mm4_exon_Rnf165_chr18_77462977 |
TCCCCTTCATCTTTCTTGCCCTTGCTGTCCTGGGGTCTTCGCTGTGAATAGAGAAAGAAAAAGGTTTTAGTTCCTTGGTA GAGACTCCTGCTGGCAACTG |
| mm3_intron_Arhgap15_chr2_44287005 |
TCAAGCAACTCTCCAGTGGTAGAAAACACCACAGCCCAGAGATCTTGGCTGAGAACATTTTAGTCCTTTTCTTTGAACTT CACTCTGGGGGCAGGTAACTGAGAGTAC |
| mm4_intron_Tnni1_chr1_135798567 |
CTGAGAGCCTGCTTCTGACCTCCCAGAGGGGGTCAGTCCTCTGCCTGTCCTGCCTAACCTGGGATCTTGGCCTACAAGAT GACTGACTATAATAGCCACTGGATTAACATAGCAGGCATTGTCTTTCTCTGA |
| mm4_exon_Flnc_chr6_29454413 |
CACCCGGAGACTACAGCATCATCGTGCGCTTTGACGACAAGCACATCCCAGGGAGCCCCTTCACGGCCAAGATCACAGGT GAGGCAGACATTCAGGCACGGGCAGCCTGCCACACCCATGCTCGAGTCAGTT |
| mm4_exon_Flnb_chr14_7927497 |
GCCAGGGGACTACAGCATTCTGGTCAAGTACAATGACAAACATATTCCTGGCAGCCCCTTCACTGCCAAGATCACAGGTA GGGTTGCCCGGCTTATAGGAATTTCTCATGGGAGATCTAGCTGTGCCT |
| mm4_intergenic_Gm13668|A630050E04Rik_chr2_74084756 |
GAGACTGTGGCCAAGGACTCCAAAGAACTCTGAAGCTTTAATTTAACCCAACTAAAACTCTAAAGAGAAAAGAGAAGACT ATTAATGAAAGCTGTTCTCAACCAAGACACCGGGTCAGAGCACTTATTGGCAGAAGA |
| mm4_exon_Adamts14_chr10_61198415 |
GGAACCTGTGCTACCTCCTGTCCCCTGCGCTTGAGTCCTCTGAGCCAGGATCCCTGGGACCACAGGCAGAGTGTAAAAAA GACTGGAGGGATGGGCTCATGTCAC |
| mm4_intergenic_Gm13994|Slc24a5_chr2_125046183 |
CAGTGGGCATTGCTGGAAAAGTTCAATAGTTTGATATCCAGTCAGGCCAAAGTACTGCAATATCAAATCATCTGAGCCAA GATACCAGGTAACATCAAGGAAGAAAGACTTCCCACCACTTAGAGGGGA |
| mm4_intergenic_Rdh10|Stau2_chr1_16173476 |
CCAGGAAACCACCCTCTGTGGGGTGATTAGACTGGTCTCAGCAAAGACCCCAGGCTTGAACGATGTCCCTCAGGACTCCA CAACAC |
| mm4_intron_Klhl29_chr12_5273493 | TCCAAGTGATCACAGCTGCCAAGAAAGAAATCAACTCAGCCAAGATTCCAGGCCTGACGGGATCCAGGGTTTCCTA |
| mm4_intergenic_Ccnd1|Tpcn2_chr7_145020987 |
CTAATGCCCTCCTGGACCTGGACAGCCAACCAGAGATCATTACTGATGCTCATGTTGGCAGAACCCAGGTTTTTGGCTGA GGAGAGAGCTTGGGATTCTTGCTGATACCTTGTCCTAGTGGAACAGATGCGCATGCTGAG |
| mm4_intergenic_Gm25261|Gm831_chr4_131359776 |
TGAGGGAGGAACAGGTTGGAGGGACCCGTTGGGTCTCAGTCACTTCTCTCTGATGTTCTCCTCTCAGCCAGGACTCCAGG AGGCCAAGGAGGAGGGGACATGGCTGGTCCTTTCTGTCTCC |
| mm4_intron_Rgs3_chr4_62619998 |
CGGGTTATAGGCAGCTGAGGCCAGTTCTGAGTGTTTTCCTATCCACTGCCTGGGATCCTTGATGAGATGAGTTAGCTGTT GCTGCTTGGTTTT |
| mm4_intergenic_Spata13|C1qtnf9_chr14_60766680 |
GGTAACTTGCCGCATCCTCTGCACCAAAAGCTGAAGTCCGGGGTTCCTGGAAGAGAAGAGTAATTGTCAGGTCCGAAAGG AACCTCGGTT |
| mm4_intergenic_Gm22785|Gm8410_chrX_70693980 |
TGACCACCAGGAGAAGACCATGCCCAAAATGACATTTGCCTGATGCCATAATGCACATGTGGGTCATAGCAATCCTGAGA CCACTCCTGGGATCTCTCCTGAGAAGATCCCAGACACTCAGAGACCC |
| mm4_intergenic_Gm15867|Syt14_chr1_192891006 |
GGTTAGATCTGACTCGTGGTGAAGAAAACATGATCCAGATAGTTTGACAGCACATGTGACTCTTTTCAGACATGATCCTG GGAACAAACAGACCCACTTGATTATTTCTGTATGTAAGTGACATTGGCCCATTGTGT |
| mm4_intron_Rbfox3_chr11_118754506 |
ACAGGCCATGTGTGTGTCAACCAAGGGTCTTGGCTGAGAACAAGAAGGAAGTCAGCACAGAGAATGGGGCTCACTCTATG GTGTG |
| mm4_intron_Mtch1_chr17_29339978 |
CCTCTGACTGGGAAGGACCTGAGCTCGTCTCCTGTCGCCCCCTGCCTCTTCCCAGCCATAATCCTCGGCTTATGGTGGGG CCAGCCTACACCCACCCATCTGTACTTTAGTGGGCTCAGCTGCCATGCTCTTACC |
| mm4_intergenic_Gm23673|Gm9381_chr3_124934462 |
CTCACTCCTACAGGGAAAACCATCTTCTTAATTTAAGATTAAAAGTAGATATATTTATATCCGCAATCAACTTTTTTGAC AATAGAGACCCGGGTTCTTGACTGTGAAAAGTAAATTGGCCCTGGCTGTTGA |
| mm4_intergenic_Plb1|Gm5864_chr5_32398748 |
CCAGTGCCAATTTGTCCCCTACCTTCAGGTGCTATATCCCCCTGTCAGATTTTTGTTTAAACTTCTCAGCCCAGAACCCA GGGTCCTTGGTCATCTGGCTCC |
| mm4_intron_Tmem132d_chr5_128103070 |
TCTACTCAGCTGGGGTCACTGCCAGACCCTCCTGGGTACTTTAGTCAGCTAAGATCCCTGGGAGGCGGGTGAGATAATTC TGC |
| mm4_intergenic_Gm3104|Gm7353_chr7_3092054 |
GCCTCACTTGAGTGGAGGAAAACAGGAAAGCTCTAGGGGAGCAGATAAGTTATTTTTCAGGGCCTGAGGATCTAAAACCC CAGGTGTCTTGGGAGAGAAGAGAATACTTTGGTGGTATCCCAGCTGGAAAGAGATGGT |
| mm3_intergenic_Atp1b3|BC043934_chr9_96398824 |
CAGAGAGGAAGGGAGGCCTCCGGGAAGGCTTTGACCCCCTCCTTCTCTACTTAGCCAAGGTCCCTGGCTTGTGCAGCAGG GTTTTAATATTTCCAGCGGAACCACAGACAAGGTGGTAAGGAATGGGGAAGGGTGTGTT |
| mm4_intron_Odf2l_chr3_145146101 |
CTGCTGCTTGAGTCTCCTCATTTTTCTCCTAGGATCTTGTCTGGGTAGAGGTTCAGAGGTTGCTTGCTTATCTTTTGTCT TCATGGCCAGAGGGTGCATGTGCTGTGAGTGCTCAGCTCAGACACCTT |
| mm4_intergenic_Gm24132|Gm25160_chr8_96728242 |
AGGCCTACTAGATGGTTTCCATCTCCTGGAATATTTGCTGAGGAGAGCTGCAAGGTATCCTTTTAGCAGAAGTCCGCTTG TTCTCTATATGTGATGGGGCCAGGGACACTAAAAT |
| mm4_intergenic_Camk2n1|Vwa5b1_chr4_138516640 |
GGTGAGATCATTGGTGGCCACATTCCATAGACCTCAGAATTAATGTGTTACTAGTCCCCCAGGGACCTTGGCAGAGAGTA GGGCTGGCTCCTTGTCAATACAGTTCCCCCATGCAGAGGTGTGGCCCAGTATG |
| mm4_exon_Reps2_chrX_162416457 |
ACAGCCAAGGATTGTTGCAGAGTTAGTGGCTATTTTTCTTCCCTTCTCAGCCTGGATACCCGGATTCAACAACAAATAGG TAGCTATCCAGCTACTAATATTTGTTGGGTGGTTTCCAAGCT |
| mm4_intron_Postn_chr3_54364662 |
TGTGCTTTCTGTGAACAAAACCTAAACGTTTTTGTTGTATTTGAAACATCCCCTCAGATAAACACATTGTCCACTTCTCA GCTGAGGTCCCAGGCCACTGTTCTGCAAGCTCGCCCCTTCCCCAGCATGACTTT |
| mm4_intergenic_Sall1|Gm6625_chr8_89076014 |
GGGCGGCCATAGCATATCTATCACTGTCACCCCTGTTCCTGGGTTCTAGGCTGAGCACAGGTGTCCTCCCTGGTCCCCAA TTCAGGAATTTCCAACCCACATGGACATTTACCTTGAAGCAGAGAGGCAA |
| mm4_intron_Cntnap5b_chr1_100038514 |
TGTGTGAACAAGTTTACCCAGTGTTAATCCTCTAGATTATATCTGCTGCCTCCTGATCCCTGTGATGTTTGCAGAGAAGA GCAGTAGAGAGCATAATTAATGCCTGTGGAGGAAGCAT |
| mm4_intergenic_Gm26253|Rab1_chr11_20200928 |
TTAGAGCAGCCTCAGACCCTGATGGTGATGGCCCCTGTGGTCTTGCCTGAGCAGAGCTCGTCAAGCTGTCTCCACCCCTC CTCA |
| mm4_intergenic_4933413G19Rik|Nrip2_chr6_128393461 |
CAGGGCAGTGTCCTCTCTTGGTAATAGATTTCAAAATTGGCACTGGGTTCCAGGGACCCTTGCTGAGCAGAGGAATTCTC GAAAGCCACATCATTCATGCCTTCAGCGGA |
| mm4_intron_Prkd1_chr12_50639115 |
TTTCCCACCTGTCCAAGTGGCCAACTTTACAGTCTCCTGTCTCAGCTTAAATTGTTCAGAGTAAGATGACCTGGGATCTA GACCTAGAAGAGATTTAAGGATAACTGTGTGTGGAATCCAAAAGCCTGAGGT |
| mm4_intron_Abca4_chr3_122139964 |
GTCCTGGGTCAATCCTGCTCTTTATATTGCTCAGGCAATAGATTGTCCCTTTGGGTGACAGCTACATTGCCACATTGCAG ATATCCCTGACTCCCTAGGATCTGGGCTGAGAAAGGAAACCATCAGACCTCCATGCACA |
| mm4_exon_Ndrg3_chr2_156935364 |
AATGGACGGATGGACAGACGGCTGCCACGCCCCAGCCTCTGACTCTTCTGACTCAAGATCTCTGGCTCTCCAGTGTGAAG CTGAATTCTTTGTGACTGTTCCATTGTGATGGTCATCAAAATCGGGGATGATGGCCTG |
| mm4_intergenic_Gm12126|Tenm2_chr11_36096384 |
CTGGCCTCTCTCCAATTCCCCCAGAGCTCTTGGCCGAGAAGATGGAAAACCAAAGAAAAGAGCACAGGCCTTGGGCAGCT GCTCTTGCGCGCTGCAGAGAACGCCTCGCTATT |
| mm4_intergenic_Gm14055|Gm14064_chr2_137375075 |
GGCTTTAGAACCCAGCTCCACTTACCATCTGTCTGTTAGCACCACGAATCTTGGCTGAGAAGGATGCTTTGCAGATCTGG GAATTCCATTCCCCCCCTTTTTCCCCCAAGCACCTAGGGATGGGGCTTTCCAGA |
| mm4_intron_Prmt3_chr7_49824514 | CAACAGCCTTGAAGTCGCACCTCTTCTCTGGCAGGATCTCTGGGTCTGACCCACTGCCTGTGTTGGGGACAAGGCTTT |
| mm4_intron_Alg5_chr3_54748240 |
GCCTTCCAGGATAGGCTTCCATAGCTGCCAGGGCTACCCTGTTCCAGACAGGACAGGGAGGGGACAGGGACCTTTAATCA GAAAAACACCCAGGGTCCCTGGCTGAGAGGAGAGAGTGGAGAAGCAGCTGTGAGTG |
| mm4_intergenic_Cadm1|Nxpe2_chr9_47905177 |
AATCCGTCCTGCCTTGAGTGTGCAGGCTCCACCGCTCTCTCTGTCAGTAAGTTCTGCATCCCTCTCTGCACAGGCCAGAT CCCTGGCATTCCTGTCCACCAGGAGCAAGACCTTGT |
| mm4_intergenic_2310015A10Rik|Actn1_chr12_80137741 |
CCCTTCCTCACGTCTTGTCCAAAGGCTTGGAGCCTGAGAAGGAGACTGGGGAAGGAGTTCTGTTCCCAGCCAATAACCCT GGGCAGCTCAGTCAGAGCCACCAGCAGAGGGACGTTCAAT |
| mm4_exon_Mrto4_chr4_139352453 |
CGCCCAGTGTCCTGAAGGCCACTTCTCTGCCCAGGTCCCGGGTCCCTCCAGTCCCGGCGGCTTCCGAGTCCCGAGCACTC CACCAAGTCCCTCGCGAACCGGTTCCTCTCTATGGCT |
| mm3_intron_Hydin_chr8_110313247 |
TCACATTCAGCCTTCAGAGCAAAAACATCGCCAGGGCTCAAGGCTGAGAAGAGGTTCTCCATAGAGGACTGAAGTACCTT AGAGTCCCCCTCAAACACAGCAGGGAAGGAAGAGCTAACGCCAGAGATCTGC |
| mm4_intergenic_Ninj1|1110007C09Rik_chr13_49199861 |
GCTCACAGGTCTTTGAGGCATCTCTAAAGAAGGGGTATATGCAATGGTGTCAAATGGGGACCAGACCCAGGATCTTCTCA GCCACCATCCTAGGCATTCCCAGCCTTTGACTGACA |
| mm4_intron_Tspan18_chr2_93215974 |
CAGGGTTCAGGGCACACTTAGCCGAGGCTGGCAAAGCAGCCAAGCACAGCCTGCTCTCAGCCAAGAGCACAGGCTGCCTT CCGGGCTTGGCTGCAGAGATGGGCCCATTA |
| mm4_intergenic_Rnf220|Gm12828_chr4_117427390 |
TAAGCAAGAGAAGGGCAGCCCCTGTTCGTGAGAAGAAAGAGCGAGAGTCTGGGAGGCTGCTCTTCTCCCCCAAGAAGCCA GGCAGTTGCTGAATAACAGGGATCGAACAGTCCGTGAA |
| mm4_intron_Gli2_chr1_118864994 |
GCACCAGCCTAGAGTTTGGTGGTGGTTCCCCACGCCTCTACTCAGCCCACATACCAGGCATCCTTGGACAGCTCTAGGGT TGCCAGGTA |
| mm4_intergenic_Prodh|Rtn4r_chr16_18122733 |
CTCCCTTGGGCTTAGGTTCCCCATATGTACCTTGATGAGGATCCCAGGGATGAGGGGTGAGAAGAGCCAAGATCCAGCAA AAGGATGAACTGACCTCCCAGAGGATCGAATGGC |
| mm4_intergenic_Gata6|Rbbp8_chr18_11352925 |
TCTGTTTCAGCACAGGCCAAAGCCCTCTTCCCTGACACCAGCGATCTTCCCTAAGAAGAGATCTGGCCCCGTTTGGAGGC AGATGTTGGATTTTCTTCTTTCCCCTCTGGCACC |
| mm4_intron_Cdc42bpg_chr19_6313094 |
CCCATTGCTGTCCAAGGTCACTTGTATAGCCCCAAAGGCAGGGTGTGGTCTAGTGCTTCTCTTCTCAGCATGGAGCCCAG GACCTGGGTCTGGATCGATGTGCCAGGGTGTTT |
| mm2_intron_Creb5_chr6_53687839 |
GCAGACACAGGTCAGACACAAAACGTTAAATCAGGGTGAATTAAAACGAGTCCCTACAGATTTACTCCAGGATCTTCGCT GAGAAGAGTCATAGCAGAGCCACACAGAAAGATGCCC |
| mm4_intron_Usf2_chr7_30952267 |
CTCTGCAACCCACCCTACAGAAAAACCACAGGGGAAAAAGACGGAGAAGCTACATGGAGACTCTTGTCAGCACAGAGCCC TGGGAAGGAAAGGGTAGAGCTCTGAAAGTCACCCTGC |
| mm4_intergenic_Sumf1|Gm4604_chr6_108136626 |
CAAAGCACCCACTGGCAAACCCTGCTCTTCTCAGTCAACATTGCTGGCCCAATCAGGTGTCATACACTATAAAAGACAGA GCTCATAAAAGCCCTTTAAGTAGATGGAAGGA |
| mm3_intergenic_Gm25875|Gm23835_chr15_60327500 |
AGGGAGCAATTTAGCTGTTGTTGGAGGATAAGTCAGGGATCTGGGCTGAGATGTGGGTGAAAATGGGCACAGCCATTAGC ATTATTTTCTCTCCGGGATCTGGAATGC |
| mm4_intron_Gm5577_chr6_87982627 |
ACACCACTAAAGCGTCCAGGCCAGCTTTGTTCCAATAGGTAAGCAGTTCCCTGGCCTCTTGGGTGAAAAGAGGGAGTGAC TGCCTGTAGATCAAGAAGGCCCAGATTCTCAGCCTTT |
| mm4_intergenic_Xpr1|Gm5532_chr1_155489478 |
TTTCTGCTGCTACGGCGTATGCCAGGCATCTGGGGTGAGATGAGAAAAATGGGAACTCGAAAGCCTTTGAAACTGCAATG ATCATGGAAGCGTCTGGTAGCA |
| mm4_intron_Kidins220_chr12_25014563 |
CACCTCCCTTTCCCTGGAACTTCTCCTGGCTCTGCCCCTCCTGGCTCTGCCCCTGCCTTGGCCCTGCTTCTGTTCTCAGC AAAGCTCCTTGGTAGAGCACACTGCCCTCTCCCATGCTGTTCTTCCTCCAGTCCTCCCAG |
| mm4_intron_Calb2_chr8_110154622 |
TGTTACAACCTCAGCCGGACCCCTGGCACTCCTCAGCCACGCCCCCTGGCTCTCCTCAGCCACGCCCCCTGGCTCTCACC TCCGCCATCTCAAT |
| mm4_intergenic_Npas3|Egln3_chr12_54166396 |
ATGGGATGGCCTTCTCCTCAGATCTCAGGAAGCTTCCTGGGAACTGTGCTGAGAAGCGCCAATGGATGCTCGGGCAGGAC CTTCCAATAG |
| mm4_intergenic_Notch1|Gm13358_chr2_26538817 |
GCAGAGGAGTGGAGGGAAGAAAAAAGAGCAGCTATCTGGGCTGGCCCCTCCTCTCAGCGGAGCTCCCAGGCTTTCCCCTT CCACAGGATGCAAATTCCCCTGCCTGA |
| mm4_intergenic_Mir3095|Gm12577_chr4_58468539 |
AGAGGATGGCCCACTCCTTATATAGCCTGGGAAGAAGTAAACAGCCAGTGTCCCCTTCTCAACAAAGTTCCCAGGCAGAG ATATATAACTGTTACTGGCTTAATTTAAAAAGGGGGGCATTGTGTTCTATCTCTTCCCG |
| mm4_intergenic_Gm7488|Tbl1xr1_chr3_21360265 |
TCATGGTAGTTGCCCAGCAAGAGTTTGTAGCTGAACTATCAAGCCATCCCCTGTCCCACCAGTCTCCTCTCAGCCCAGTT CTCAGGTTTAGCCTGGTCTCTTCTATGGGG |
| mm4_intergenic_Gm26989|Vgf_chr5_137028279 |
CCTCTCTGAACCACCAGCTTTCTGATTCACCTTCCATAAGGAGGATAACGTGACCCCCCCCCCCCCAGCCCACGGCTCCA GGGAACCAGGCTGAGAAGATGAAGAAAGATGGGGAGGGAAAAGGGAAGGAGGGT |
| mm4_intergenic_Gm15011|Rbm41_chrX_139942004 |
CAAGGAGGAGGTAAGGCTGCCCACCTGAGAGGAAGCAGTCCCTTCCGGGAAACCTGGCTGAGAAGTGTAGCCCAGGGTAA CATGTGCAAGAGGCTGTAACCAGGGTGGCTCCTTC |
| mm4_intergenic_Gm12210|Gm11187_chr11_52536080 | TGGAGTGGGGAAAATGGCTGTCATATCTCCCAGAGAGCTTGGCTGAGAGGTGCTGCTTGCTGGGAGGGAAAGCAATGA |
| mm4_intergenic_Barx1|Phf2_chr13_48756890 |
GCTTGAGGGTTGGCTGTGTAAATATTTGGCCTTCGGGGCTCTTCATAGCCAAGCTCCTCGGGGCGCTGACGTTAAACACA CCG |
| mm4_exon_Brsk2_chr7_142002978 |
TAAAAGACCTGGGTGCTCCAGAGCTGCCAGGGAGCTGGGCTGAGACCAGTATTATTTATTTGCTGTTTTAATTTATTGAG TTTCTTTATGTCTCTGTTCTCTGTTCAGGGAAGGAGGAGTAGCAGCAGC |
| mm3_intergenic_Lrrc7|Gm9423_chr3_158714548 |
ACCAAGATAATCCTGTGTTCCATCTAATCTCCAGGGGACTTGGGTGAGAAGAGGGAGGACAAACTAATAAATCTGTTGCA TCTGTAATACTGCTAATTTTATGTTAGACTAACAAGCCATGGTCACTAGTAATTGGC |