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Contents:In the table below, Illumina Nextera Handle sequences have been added and highlighted in bold. Primers for the on-target have been added for convenience. The table below is sorted by the CFD off-target score. Sites with very low CFD scores < 0.02 are unlikely to be cleaved, see our study Haeussler et al. 2016, Figure 2.
In the protocol by Matthew Canver, Harvard, two PCRs are run: one PCR to amplify the potential off-target, then a second PCR to extend the handles with Illumina barcodes. Please click here to download the protocol. Alternatively, you can have a look at Fu et al, 2014.
If a primer was not found, the reason is usually that the region around the off-target is too repetitive. To avoid unspecific primers, all repeats are masked for the primer design (not for off-target search). If you think that we should change the parameters here or should use different primer3 settings, please let us know.
| Name | Primer Sequence | Tm | CFD Score |
|---|---|---|---|
| ontarget_mm0_exon_5730457N03Rik/Evx1_chr6_52313777_F | TCGTCGGCAGCGTCCCTTGTCGCCTTAGCTCCTC | 60.1 | 1.00 |
| ontarget_mm0_exon_5730457N03Rik/Evx1_chr6_52313777_R | GTCTCGTGGGCTCGGGTCCTTTCGGCTCTCCATCC | 60.1 | 1.00 |
| mm3_intergenic_Evx2|Hoxd13_chr2_74665453_F | TCGTCGGCAGCGTCTCAGCAGTCTGGCTCAACAG | 59.9 | 0.78 |
| mm3_intergenic_Evx2|Hoxd13_chr2_74665453_R | GTCTCGTGGGCTCGGCTGAAAGGGCCCACAGGTAG | 60.0 | 0.78 |
| mm4_intron_Pgk1_chrX_106192494_F | Primer3: not found at this Tm | N.d. | 0.58 |
| mm4_intron_Pgk1_chrX_106192494_R | Primer3: not found at this Tm | N.d. | 0.58 |
| mm4_intron_Gramd1b_chr9_40460070_F | Primer3: not found at this Tm | N.d. | 0.56 |
| mm4_intron_Gramd1b_chr9_40460070_R | Primer3: not found at this Tm | N.d. | 0.56 |
| mm4_intergenic_D7Ertd443e|Dock1_chr7_134500626_F | TCGTCGGCAGCGTCCAGAACTCCCAGCTGGTAGC | 60.1 | 0.55 |
| mm4_intergenic_D7Ertd443e|Dock1_chr7_134500626_R | GTCTCGTGGGCTCGGTTTCTTCCCTGGCTGCCTTT | 59.8 | 0.55 |
| mm4_intergenic_Gm16391|Gm17538_chr17_77539727_F | Primer3: not found at this Tm | N.d. | 0.55 |
| mm4_intergenic_Gm16391|Gm17538_chr17_77539727_R | Primer3: not found at this Tm | N.d. | 0.55 |
| mm4_intergenic_Eepd1|Gm25346_chr9_25555270_F | TCGTCGGCAGCGTCGCCCTGCTTTGGTGTTTTCT | 59.2 | 0.53 |
| mm4_intergenic_Eepd1|Gm25346_chr9_25555270_R | GTCTCGTGGGCTCGGGCACTAGGTTCTGGCTGGAA | 59.6 | 0.53 |
| mm4_intergenic_Mb21d2|Hrasls_chr16_29193301_F | Primer3: not found at this Tm | N.d. | 0.51 |
| mm4_intergenic_Mb21d2|Hrasls_chr16_29193301_R | Primer3: not found at this Tm | N.d. | 0.51 |
| mm4_intergenic_G630016G05Rik|Gm13991_chr2_116354594_F | Primer3: not found at this Tm | N.d. | 0.50 |
| mm4_intergenic_G630016G05Rik|Gm13991_chr2_116354594_R | Primer3: not found at this Tm | N.d. | 0.50 |
| mm3_intergenic_Hsfy2|Satb2_chr1_56781139_F | Primer3: not found at this Tm | N.d. | 0.50 |
| mm3_intergenic_Hsfy2|Satb2_chr1_56781139_R | Primer3: not found at this Tm | N.d. | 0.50 |
| mm4_intron_Spock1_chr13_57657907_F | TCGTCGGCAGCGTCCAGGTTCTGGGCAGCTGTAA | 59.9 | 0.50 |
| mm4_intron_Spock1_chr13_57657907_R | GTCTCGTGGGCTCGGCCCTGAACATCTACCGTGTGA | 59.4 | 0.50 |
| mm4_intron_Stk39_chr2_68271228_F | TCGTCGGCAGCGTCTTGCGGCTTTACAGTGGGAA | 60.1 | 0.49 |
| mm4_intron_Stk39_chr2_68271228_R | GTCTCGTGGGCTCGGGCTCTTATTTTAGGAGTAAGGAGGG | 58.4 | 0.49 |
| mm4_intergenic_Mki67|Gm9341_chr7_135925609_F | TCGTCGGCAGCGTCGAGCCTGGCAAAGTCTAGCA | 60.0 | 0.46 |
| mm4_intergenic_Mki67|Gm9341_chr7_135925609_R | GTCTCGTGGGCTCGGAGCCCTCTTCCTAGGAGGTT | 59.2 | 0.46 |
| mm4_intron_Spata16_chr3_26886283_F | Primer3: not found at this Tm | N.d. | 0.41 |
| mm4_intron_Spata16_chr3_26886283_R | Primer3: not found at this Tm | N.d. | 0.41 |
| mm4_intron_Spata16_chr3_26869083_F | Primer3: not found at this Tm | N.d. | 0.41 |
| mm4_intron_Spata16_chr3_26869083_R | Primer3: not found at this Tm | N.d. | 0.41 |
| mm4_intergenic_Mkx|Armc4_chr18_7051521_F | Primer3: not found at this Tm | N.d. | 0.41 |
| mm4_intergenic_Mkx|Armc4_chr18_7051521_R | Primer3: not found at this Tm | N.d. | 0.41 |
| mm4_intron_BC034090_chr1_155227569_F | TCGTCGGCAGCGTCTGCTGAAAAGCCTCTGAGGG | 59.9 | 0.38 |
| mm4_intron_BC034090_chr1_155227569_R | GTCTCGTGGGCTCGGGGGATCCTCAGGTCAGGGAT | 60.1 | 0.38 |
| mm4_intergenic_Gm11077|Pde3a_chr6_140870074_F | Primer3: not found at this Tm | N.d. | 0.36 |
| mm4_intergenic_Gm11077|Pde3a_chr6_140870074_R | Primer3: not found at this Tm | N.d. | 0.36 |
| mm4_intergenic_Gm13799|Gm13800_chr2_95918828_F | TCGTCGGCAGCGTCCCATCCTGGGAATCCTGAGC | 59.8 | 0.34 |
| mm4_intergenic_Gm13799|Gm13800_chr2_95918828_R | GTCTCGTGGGCTCGGTGCAAAGCACCCTAGACCAC | 60.2 | 0.34 |
| mm4_intron_Scaper_chr9_55785875_F | Primer3: not found at this Tm | N.d. | 0.34 |
| mm4_intron_Scaper_chr9_55785875_R | Primer3: not found at this Tm | N.d. | 0.34 |
| mm4_intergenic_Dscam|Bace2_chr16_97324620_F | TCGTCGGCAGCGTCGTGTCTGCCGTGGAGGTAAA | 59.9 | 0.34 |
| mm4_intergenic_Dscam|Bace2_chr16_97324620_R | GTCTCGTGGGCTCGGCTTGGACAGGGCTTAGCGAA | 60.0 | 0.34 |
| mm4_intergenic_A730056A06Rik|A730056A06Rik/Rgma_chr7_73351896_F | TCGTCGGCAGCGTCCATGGTGGTTACCCTGGGAC | 60.0 | 0.33 |
| mm4_intergenic_A730056A06Rik|A730056A06Rik/Rgma_chr7_73351896_R | GTCTCGTGGGCTCGGTGTATCCTCCGTTGGCCAAC | 60.0 | 0.33 |
| mm4_intergenic_Gm23848|Trps1_chr15_50307686_F | TCGTCGGCAGCGTCGGGAAGTGTCTGCTGGAACA | 59.8 | 0.32 |
| mm4_intergenic_Gm23848|Trps1_chr15_50307686_R | GTCTCGTGGGCTCGGGGGTACAGCTCACTCTCAGC | 59.8 | 0.32 |
| mm4_intron_Cntn6_chr6_104640388_F | Primer3: not found at this Tm | N.d. | 0.32 |
| mm4_intron_Cntn6_chr6_104640388_R | Primer3: not found at this Tm | N.d. | 0.32 |
| mm4_intergenic_Gm904|Gm23952_chr13_50669082_F | Primer3: not found at this Tm | N.d. | 0.32 |
| mm4_intergenic_Gm904|Gm23952_chr13_50669082_R | Primer3: not found at this Tm | N.d. | 0.32 |
| mm4_intergenic_Gm24446|Hmgb1-ps1_chr11_41068536_F | Primer3: not found at this Tm | N.d. | 0.32 |
| mm4_intergenic_Gm24446|Hmgb1-ps1_chr11_41068536_R | Primer3: not found at this Tm | N.d. | 0.32 |
| mm4_intergenic_Fgf13|Gm14887_chrX_59678258_F | Primer3: not found at this Tm | N.d. | 0.32 |
| mm4_intergenic_Fgf13|Gm14887_chrX_59678258_R | Primer3: not found at this Tm | N.d. | 0.32 |
| mm4_intron_Tnrc6b_chr15_80852852_F | Primer3: not found at this Tm | N.d. | 0.32 |
| mm4_intron_Tnrc6b_chr15_80852852_R | Primer3: not found at this Tm | N.d. | 0.32 |
| mm4_intergenic_Zswim6|Smim15_chr13_107971913_F | TCGTCGGCAGCGTCCTCCGTGCAGGGAAAAGGTA | 59.6 | 0.31 |
| mm4_intergenic_Zswim6|Smim15_chr13_107971913_R | GTCTCGTGGGCTCGGACAGCCCCACATCACAAGAG | 59.9 | 0.31 |
| mm4_intron_Skor2_chr18_76886808_F | TCGTCGGCAGCGTCCGCTGTGTGGGCAGAACATA | 60.6 | 0.31 |
| mm4_intron_Skor2_chr18_76886808_R | GTCTCGTGGGCTCGGCAGGTTTAGTGCTCATCTGGC | 58.9 | 0.31 |
| mm4_intergenic_Nup35|Gm25420_chr2_80665581_F | Primer3: not found at this Tm | N.d. | 0.29 |
| mm4_intergenic_Nup35|Gm25420_chr2_80665581_R | Primer3: not found at this Tm | N.d. | 0.29 |
| mm4_intron_Disp1_chr1_183209299_F | TCGTCGGCAGCGTCCACATCCGTGGTCACTCCA | 59.3 | 0.29 |
| mm4_intron_Disp1_chr1_183209299_R | GTCTCGTGGGCTCGGCTGTACGGCCTGTTCTGAGG | 60.1 | 0.29 |
| mm4_intergenic_Hcrtr1|Tinagl1_chr4_130163797_F | Primer3: not found at this Tm | N.d. | 0.29 |
| mm4_intergenic_Hcrtr1|Tinagl1_chr4_130163797_R | Primer3: not found at this Tm | N.d. | 0.29 |
| mm4_intron_Man1c1_chr4_134653471_F | TCGTCGGCAGCGTCTTCGGTGTCTCCTGTGAGTT | 58.5 | 0.28 |
| mm4_intron_Man1c1_chr4_134653471_R | GTCTCGTGGGCTCGGTGCTGTGCTAGTCCTCCAAC | 59.6 | 0.28 |
| mm4_intergenic_Tmem17|Gm26829_chr11_22564309_F | TCGTCGGCAGCGTCGGGCCAGACAACAGCAAATC | 59.7 | 0.28 |
| mm4_intergenic_Tmem17|Gm26829_chr11_22564309_R | GTCTCGTGGGCTCGGCGAGGATGCAAAGGACCTCA | 59.7 | 0.28 |
| mm3_exon_Gm6576_chr15_27025366_F | TCGTCGGCAGCGTCTGGATGACGCCTGTGCAG | 60.0 | 0.27 |
| mm3_exon_Gm6576_chr15_27025366_R | GTCTCGTGGGCTCGGCTAAGACCGAATTCCGCCGA | 59.8 | 0.27 |
| mm4_exon_Abcc6_chr7_45981105_F | Primer3: not found at this Tm | N.d. | 0.27 |
| mm4_exon_Abcc6_chr7_45981105_R | Primer3: not found at this Tm | N.d. | 0.27 |
| mm4_intergenic_Gm26429|Gm4345_chr17_39471085_F | Primer3: not found at this Tm | N.d. | 0.26 |
| mm4_intergenic_Gm26429|Gm4345_chr17_39471085_R | Primer3: not found at this Tm | N.d. | 0.26 |
| mm4_intergenic_Gm25547|Efcab1_chr16_14839634_F | Primer3: not found at this Tm | N.d. | 0.26 |
| mm4_intergenic_Gm25547|Efcab1_chr16_14839634_R | Primer3: not found at this Tm | N.d. | 0.26 |
| mm4_intergenic_Tcf7l2|Gm22271_chr19_55985609_F | TCGTCGGCAGCGTCACCTTGTGCTTGTCCCAGAG | 59.8 | 0.26 |
| mm4_intergenic_Tcf7l2|Gm22271_chr19_55985609_R | GTCTCGTGGGCTCGGCAAGACCTGGCTCGGAATGT | 60.0 | 0.26 |
| mm4_intergenic_Gm22798|Cog6_chr3_52813828_F | Primer3: not found at this Tm | N.d. | 0.26 |
| mm4_intergenic_Gm22798|Cog6_chr3_52813828_R | Primer3: not found at this Tm | N.d. | 0.26 |
| mm4_intergenic_Snx29|Cpped1_chr16_11794831_F | TCGTCGGCAGCGTCCCAACAATGGTGACCTAGGCA | 60.2 | 0.25 |
| mm4_intergenic_Snx29|Cpped1_chr16_11794831_R | GTCTCGTGGGCTCGGTTCATGTGGTTGCTGGGTGA | 59.8 | 0.25 |
| mm4_exon_H2-T3_chr17_36186473_F | Primer3: not found at this Tm | N.d. | 0.24 |
| mm4_exon_H2-T3_chr17_36186473_R | Primer3: not found at this Tm | N.d. | 0.24 |
| mm4_intron_Efcab8_chr2_153793267_F | Primer3: not found at this Tm | N.d. | 0.24 |
| mm4_intron_Efcab8_chr2_153793267_R | Primer3: not found at this Tm | N.d. | 0.24 |
| mm4_intron_Ccdc88a_chr11_29416530_F | Primer3: not found at this Tm | N.d. | 0.24 |
| mm4_intron_Ccdc88a_chr11_29416530_R | Primer3: not found at this Tm | N.d. | 0.24 |
| mm4_intergenic_Gm14085|Gatm_chr2_122553033_F | Primer3: not found at this Tm | N.d. | 0.24 |
| mm4_intergenic_Gm14085|Gatm_chr2_122553033_R | Primer3: not found at this Tm | N.d. | 0.24 |
| mm4_intergenic_Gm16013|9230020A06Rik_chr11_71456962_F | TCGTCGGCAGCGTCCACAGAGTCCCCATGCTGAA | 59.6 | 0.24 |
| mm4_intergenic_Gm16013|9230020A06Rik_chr11_71456962_R | GTCTCGTGGGCTCGGGAGAAAGGACTGGCCATCCC | 60.1 | 0.24 |
| mm4_intron_Serpinh1_chr7_99351724_F | Primer3: not found at this Tm | N.d. | 0.23 |
| mm4_intron_Serpinh1_chr7_99351724_R | Primer3: not found at this Tm | N.d. | 0.23 |
| mm4_intergenic_Gm24441|Gm24870_chr13_103629473_F | Primer3: not found at this Tm | N.d. | 0.23 |
| mm4_intergenic_Gm24441|Gm24870_chr13_103629473_R | Primer3: not found at this Tm | N.d. | 0.23 |
| mm4_intergenic_Tktl2|Gm16330_chr8_66522583_F | Primer3: not found at this Tm | N.d. | 0.23 |
| mm4_intergenic_Tktl2|Gm16330_chr8_66522583_R | Primer3: not found at this Tm | N.d. | 0.23 |
| mm4_intron_Chmp3_chr6_71568624_F | Primer3: not found at this Tm | N.d. | 0.23 |
| mm4_intron_Chmp3_chr6_71568624_R | Primer3: not found at this Tm | N.d. | 0.23 |
| mm4_intron_9530036O11Rik_chr5_28637818_F | Primer3: not found at this Tm | N.d. | 0.23 |
| mm4_intron_9530036O11Rik_chr5_28637818_R | Primer3: not found at this Tm | N.d. | 0.23 |
| mm4_intergenic_Btg4|Pou2af1_chr9_51126524_F | Primer3: not found at this Tm | N.d. | 0.23 |
| mm4_intergenic_Btg4|Pou2af1_chr9_51126524_R | Primer3: not found at this Tm | N.d. | 0.23 |
| mm4_exon_Gm15506_chr7_98693245_F | TCGTCGGCAGCGTCTACAGCACTGACGTGTGACC | 59.9 | 0.23 |
| mm4_exon_Gm15506_chr7_98693245_R | GTCTCGTGGGCTCGGGGCCTTCGTTATTGCTGTCG | 59.6 | 0.23 |
| mm4_intergenic_Zfp956|Zfp777_chr6_47977814_F | TCGTCGGCAGCGTCGAATCCTCTGCAGAAGCCGG | 60.8 | 0.22 |
| mm4_intergenic_Zfp956|Zfp777_chr6_47977814_R | GTCTCGTGGGCTCGGGTCGAATGACACCGATGCAG | 59.3 | 0.22 |
| mm4_intergenic_Macc1|Gm25675_chr12_119826366_F | Primer3: not found at this Tm | N.d. | 0.22 |
| mm4_intergenic_Macc1|Gm25675_chr12_119826366_R | Primer3: not found at this Tm | N.d. | 0.22 |
| mm4_intergenic_Gm12033|Gm12034_chr11_20361082_F | Primer3: not found at this Tm | N.d. | 0.21 |
| mm4_intergenic_Gm12033|Gm12034_chr11_20361082_R | Primer3: not found at this Tm | N.d. | 0.21 |
| mm3_intergenic_1700061J23Rik|Gm24398_chr11_23172262_F | Primer3: not found at this Tm | N.d. | 0.21 |
| mm3_intergenic_1700061J23Rik|Gm24398_chr11_23172262_R | Primer3: not found at this Tm | N.d. | 0.21 |
| mm4_intergenic_Ccnt2|Map3k19_chr1_127809725_F | Primer3: not found at this Tm | N.d. | 0.21 |
| mm4_intergenic_Ccnt2|Map3k19_chr1_127809725_R | Primer3: not found at this Tm | N.d. | 0.21 |
| mm4_intergenic_Kcnj1|Fli1_chr9_32417667_F | TCGTCGGCAGCGTCCCTCTCAGAAGTGGCCATCC | 59.8 | 0.20 |
| mm4_intergenic_Kcnj1|Fli1_chr9_32417667_R | GTCTCGTGGGCTCGGACTGCACGCCTTTAGCCATA | 59.7 | 0.20 |
| mm4_intergenic_Gm14078|Macrod2_chr2_140981422_F | Primer3: not found at this Tm | N.d. | 0.19 |
| mm4_intergenic_Gm14078|Macrod2_chr2_140981422_R | Primer3: not found at this Tm | N.d. | 0.19 |
| mm3_intron_Arnt_chr3_95445973_F | TCGTCGGCAGCGTCCATCACCAAACTGCCCTCCT | 59.9 | 0.19 |
| mm3_intron_Arnt_chr3_95445973_R | GTCTCGTGGGCTCGGTCCAAGTGTAGAGCTTCTGGTC | 59.4 | 0.19 |
| mm4_intergenic_Gm8707|Sorl1_chr9_41805998_F | TCGTCGGCAGCGTCCTTTCCACAGGCAGGCATTG | 59.7 | 0.18 |
| mm4_intergenic_Gm8707|Sorl1_chr9_41805998_R | GTCTCGTGGGCTCGGGCCTGATTTTGGTGCAGTCA | 59.0 | 0.18 |
| mm4_intergenic_Gm23594|Il20rb_chr9_100205569_F | Primer3: not found at this Tm | N.d. | 0.18 |
| mm4_intergenic_Gm23594|Il20rb_chr9_100205569_R | Primer3: not found at this Tm | N.d. | 0.18 |
| mm4_intergenic_Sntg1|Gm24765_chr1_9373539_F | Primer3: not found at this Tm | N.d. | 0.18 |
| mm4_intergenic_Sntg1|Gm24765_chr1_9373539_R | Primer3: not found at this Tm | N.d. | 0.18 |
| mm4_intron_Terf2_chr8_107085326_F | Primer3: not found at this Tm | N.d. | 0.17 |
| mm4_intron_Terf2_chr8_107085326_R | Primer3: not found at this Tm | N.d. | 0.17 |
| mm4_intron_Sh3rf1_chr8_61381325_F | Primer3: not found at this Tm | N.d. | 0.17 |
| mm4_intron_Sh3rf1_chr8_61381325_R | Primer3: not found at this Tm | N.d. | 0.17 |
| mm4_intergenic_Zbtb38/E030011O05Rik|Acpl2_chr9_96814273_F | TCGTCGGCAGCGTCCTAAGACCGCTGCCGAATCC | 60.8 | 0.17 |
| mm4_intergenic_Zbtb38/E030011O05Rik|Acpl2_chr9_96814273_R | GTCTCGTGGGCTCGGGGGAAAACACCAAATGGCGG | 60.3 | 0.17 |
| mm4_intergenic_Snx19|Adamts15_chr9_30512978_F | TCGTCGGCAGCGTCCAATGACACCAGTGCAGCTG | 59.7 | 0.17 |
| mm4_intergenic_Snx19|Adamts15_chr9_30512978_R | GTCTCGTGGGCTCGGTGCTGCCAAATCTGCCACTA | 59.9 | 0.17 |
| mm4_intergenic_Rps2-ps6|Tsc22d1_chr14_76237483_F | TCGTCGGCAGCGTCCTAAGACCGCTGCCGAATCC | 60.8 | 0.17 |
| mm4_intergenic_Rps2-ps6|Tsc22d1_chr14_76237483_R | GTCTCGTGGGCTCGGGGGAAAACACCAAATGGCGG | 60.3 | 0.17 |
| mm4_intergenic_Rhobtb3|Gm6311_chr13_75954174_F | TCGTCGGCAGCGTCGGGAAAACACCAAATGGCGG | 60.3 | 0.17 |
| mm4_intergenic_Rhobtb3|Gm6311_chr13_75954174_R | GTCTCGTGGGCTCGGCTAAGACCGCTGCCGAATCC | 60.8 | 0.17 |
| mm4_intergenic_Gm6139|Zfp11_chr5_129623809_F | TCGTCGGCAGCGTCCTAAGACCGCTGCCGAATCC | 60.8 | 0.17 |
| mm4_intergenic_Gm6139|Zfp11_chr5_129623809_R | GTCTCGTGGGCTCGGGGGAAAACACCAAATGGCGG | 60.3 | 0.17 |
| mm4_intergenic_Gm26901|Sntg1_chr1_7664125_F | TCGTCGGCAGCGTCAGATGACGCCGGTGTAATGG | 60.1 | 0.17 |
| mm4_intergenic_Gm26901|Sntg1_chr1_7664125_R | GTCTCGTGGGCTCGGAAGACCGCTGCAGAATCCTC | 60.1 | 0.17 |
| mm4_intergenic_Gm14263|Gm14266_chr2_170954856_F | TCGTCGGCAGCGTCTCAGCTTTACCTCCACGAGC | 59.7 | 0.17 |
| mm4_intergenic_Gm14263|Gm14266_chr2_170954856_R | GTCTCGTGGGCTCGGGAAGCCGATGTAGCAGGAGG | 60.2 | 0.17 |
| mm4_intergenic_Cbs|U2af1_chr17_31644717_F | TCGTCGGCAGCGTCCTAAGACCGCTGCCGAATCC | 60.8 | 0.17 |
| mm4_intergenic_Cbs|U2af1_chr17_31644717_R | GTCTCGTGGGCTCGGGGGAAAACACCAAATGGCGG | 60.3 | 0.17 |
| mm4_intergenic_Agrp|Fam65a_chr8_105586138_F | Primer3: not found at this Tm | N.d. | 0.17 |
| mm4_intergenic_Agrp|Fam65a_chr8_105586138_R | Primer3: not found at this Tm | N.d. | 0.17 |
| mm4_exon_Rps2-ps9_chr17_27784462_F | TCGTCGGCAGCGTCCAAATGGCGGGTGATGCTG | 59.8 | 0.17 |
| mm4_exon_Rps2-ps9_chr17_27784462_R | GTCTCGTGGGCTCGGAGCTTTACTTCCACGAGCCC | 60.0 | 0.17 |
| mm4_exon_Rps2-ps13_chrX_52898626_F | Primer3: not found at this Tm | N.d. | 0.17 |
| mm4_exon_Rps2-ps13_chrX_52898626_R | Primer3: not found at this Tm | N.d. | 0.17 |
| mm4_exon_Rps2-ps10_chr18_61259899_F | Primer3: not found at this Tm | N.d. | 0.17 |
| mm4_exon_Rps2-ps10_chr18_61259899_R | Primer3: not found at this Tm | N.d. | 0.17 |
| mm4_exon_RP24-225O12.5_chr14_69158686_F | TCGTCGGCAGCGTCAAATGGCGATGACACCGGT | 60.0 | 0.17 |
| mm4_exon_RP24-225O12.5_chr14_69158686_R | GTCTCGTGGGCTCGGCCCTAAGACCTCCTCCTCCG | 60.4 | 0.17 |
| mm4_exon_Gm9013_chr14_60040429_F | Primer3: not found at this Tm | N.d. | 0.17 |
| mm4_exon_Gm9013_chr14_60040429_R | Primer3: not found at this Tm | N.d. | 0.17 |
| mm4_exon_Gm7222_chrX_134828998_F | Primer3: not found at this Tm | N.d. | 0.17 |
| mm4_exon_Gm7222_chrX_134828998_R | Primer3: not found at this Tm | N.d. | 0.17 |
| mm4_exon_Gm6433_chr5_141268393_F | TCGTCGGCAGCGTCCTAAGACCGCTGCCGAATCC | 60.8 | 0.17 |
| mm4_exon_Gm6433_chr5_141268393_R | GTCTCGTGGGCTCGGGGGAAAACACCAAATGGCGG | 60.3 | 0.17 |
| mm4_exon_Gm5921_chr9_115438519_F | TCGTCGGCAGCGTCCTAAGACCGCTGCCGAATCC | 60.8 | 0.17 |
| mm4_exon_Gm5921_chr9_115438519_R | GTCTCGTGGGCTCGGCACCAAATGGCAGATGACGC | 60.1 | 0.17 |
| mm4_exon_Gm5786_chr12_59081057_F | TCGTCGGCAGCGTCGGGAAAACACCAAATGGCGG | 60.3 | 0.17 |
| mm4_exon_Gm5786_chr12_59081057_R | GTCTCGTGGGCTCGGCTAAGACCGCTGCCGAATCC | 60.8 | 0.17 |
| mm4_exon_Gm4968_chr6_127233794_F | Primer3: not found at this Tm | N.d. | 0.17 |
| mm4_exon_Gm4968_chr6_127233794_R | Primer3: not found at this Tm | N.d. | 0.17 |
| mm4_exon_Gm12922_chr4_123709965_F | Primer3: not found at this Tm | N.d. | 0.17 |
| mm4_exon_Gm12922_chr4_123709965_R | Primer3: not found at this Tm | N.d. | 0.17 |
| mm4_exon_Gm11599_chr1_62660877_F | Primer3: not found at this Tm | N.d. | 0.17 |
| mm4_exon_Gm11599_chr1_62660877_R | Primer3: not found at this Tm | N.d. | 0.17 |
| mm4_exon_Gm11249_chr4_67930919_F | TCGTCGGCAGCGTCCACCAAATGGCAGATGACGC | 60.1 | 0.17 |
| mm4_exon_Gm11249_chr4_67930919_R | GTCTCGTGGGCTCGGCTAAGACCGCTGCCGAATCC | 60.8 | 0.17 |
| mm4_exon_Gm10653_chr9_62842285_F | TCGTCGGCAGCGTCCACTGCTGAATCCTCCGAGG | 60.1 | 0.17 |
| mm4_exon_Gm10653_chr9_62842285_R | GTCTCGTGGGCTCGGGGAAAACACCAAATGGCGGA | 59.3 | 0.17 |
| mm4_exon_Gm10420_chr6_122696039_F | TCGTCGGCAGCGTCGGGAAAACACCAAATGGCGG | 60.3 | 0.17 |
| mm4_exon_Gm10420_chr6_122696039_R | GTCTCGTGGGCTCGGCCCTAATACCGCTGCCGAAT | 59.9 | 0.17 |
| mm4_intergenic_4833422M21Rik|2610037D02Rik_chr15_96276901_F | Primer3: not found at this Tm | N.d. | 0.17 |
| mm4_intergenic_4833422M21Rik|2610037D02Rik_chr15_96276901_R | Primer3: not found at this Tm | N.d. | 0.17 |
| mm4_intergenic_Gm12878|Gm12892_chr4_122003731_F | Primer3: not found at this Tm | N.d. | 0.17 |
| mm4_intergenic_Gm12878|Gm12892_chr4_122003731_R | Primer3: not found at this Tm | N.d. | 0.17 |
| mm4_intron_Zfp410_chr12_84326488_F | TCGTCGGCAGCGTCTGTGCAGTTCATCACAGCCA | 60.1 | 0.17 |
| mm4_intron_Zfp410_chr12_84326488_R | GTCTCGTGGGCTCGGTTGCTGTTCTGCTTCCTGCT | 60.1 | 0.17 |
| mm4_intergenic_Gm15663|Mettl25_chr10_105667540_F | TCGTCGGCAGCGTCTTGGAACCCTCATCACCACC | 59.5 | 0.16 |
| mm4_intergenic_Gm15663|Mettl25_chr10_105667540_R | GTCTCGTGGGCTCGGGTTTTGCCTGGTGATCGCAG | 60.1 | 0.16 |
| mm4_exon_Cntrob_chr11_69303255_F | TCGTCGGCAGCGTCGAGACTTGACGCCATGGCTA | 59.8 | 0.16 |
| mm4_exon_Cntrob_chr11_69303255_R | GTCTCGTGGGCTCGGACCCTGTGTTCATGGTTGCA | 60.1 | 0.16 |
| mm4_intergenic_Mbl2|Gm24108_chr19_30260724_F | Primer3: not found at this Tm | N.d. | 0.16 |
| mm4_intergenic_Mbl2|Gm24108_chr19_30260724_R | Primer3: not found at this Tm | N.d. | 0.16 |
| mm4_intron_0610012H03Rik_chr2_105227450_F | TCGTCGGCAGCGTCCCCACGCTATAGCCAGGATG | 60.0 | 0.16 |
| mm4_intron_0610012H03Rik_chr2_105227450_R | GTCTCGTGGGCTCGGCGACTGGAGCCTAGAACAGC | 60.1 | 0.16 |
| mm4_intergenic_Gm22074|Pkia_chr3_7010698_F | Primer3: not found at this Tm | N.d. | 0.16 |
| mm4_intergenic_Gm22074|Pkia_chr3_7010698_R | Primer3: not found at this Tm | N.d. | 0.16 |
| mm3_intron_Ap3d1_chr10_80718753_F | TCGTCGGCAGCGTCAATGGAGGTGCTGTAGCCAC | 60.0 | 0.15 |
| mm3_intron_Ap3d1_chr10_80718753_R | GTCTCGTGGGCTCGGTCACGTCTGCTTCAGGTGAC | 59.9 | 0.15 |
| mm4_intron_Alx3_chr3_107600293_F | TCGTCGGCAGCGTCCCCCATCACCACATCTTCCC | 60.1 | 0.15 |
| mm4_intron_Alx3_chr3_107600293_R | GTCTCGTGGGCTCGGCTTCCCCTTCCCTTCCTCCT | 60.2 | 0.15 |
| mm3_intron_Synpo_chr18_60651797_F | TCGTCGGCAGCGTCTTTGGATGGGAACTGGCTGG | 60.2 | 0.15 |
| mm3_intron_Synpo_chr18_60651797_R | GTCTCGTGGGCTCGGCACAGCCTCCACTTCCTGAC | 60.3 | 0.15 |
| mm4_intergenic_Gm13398|Tmem8c_chr2_27057603_F | Primer3: not found at this Tm | N.d. | 0.15 |
| mm4_intergenic_Gm13398|Tmem8c_chr2_27057603_R | Primer3: not found at this Tm | N.d. | 0.15 |
| mm4_intron_Ttll10_chr4_156044457_F | TCGTCGGCAGCGTCCAAACACTCCCTGGCTACCC | 60.3 | 0.14 |
| mm4_intron_Ttll10_chr4_156044457_R | GTCTCGTGGGCTCGGGAGCAGCCCACATCTAGACC | 59.8 | 0.14 |
| mm4_exon_Sars2_chr7_28753532_F | Primer3: not found at this Tm | N.d. | 0.14 |
| mm4_exon_Sars2_chr7_28753532_R | Primer3: not found at this Tm | N.d. | 0.14 |
| mm4_intron_Unc80_chr1_66582764_F | Primer3: not found at this Tm | N.d. | 0.14 |
| mm4_intron_Unc80_chr1_66582764_R | Primer3: not found at this Tm | N.d. | 0.14 |
| mm4_intergenic_Ccdc86|Ms4a10_chr19_10949372_F | Primer3: not found at this Tm | N.d. | 0.14 |
| mm4_intergenic_Ccdc86|Ms4a10_chr19_10949372_R | Primer3: not found at this Tm | N.d. | 0.14 |
| mm4_intron_Zdhhc14_chr17_5701414_F | Primer3: not found at this Tm | N.d. | 0.14 |
| mm4_intron_Zdhhc14_chr17_5701414_R | Primer3: not found at this Tm | N.d. | 0.14 |
| mm4_intergenic_Hnrnpa1l2-ps|Pcsk1_chr13_74975948_F | Primer3: not found at this Tm | N.d. | 0.14 |
| mm4_intergenic_Hnrnpa1l2-ps|Pcsk1_chr13_74975948_R | Primer3: not found at this Tm | N.d. | 0.14 |
| mm4_intron_Disp1_chr1_183199752_F | Primer3: not found at this Tm | N.d. | 0.13 |
| mm4_intron_Disp1_chr1_183199752_R | Primer3: not found at this Tm | N.d. | 0.13 |
| mm4_intergenic_Wdr20a|Stk30_chr12_110803465_F | TCGTCGGCAGCGTCACTTCTCCAGGTGGGACTGT | 60.1 | 0.13 |
| mm4_intergenic_Wdr20a|Stk30_chr12_110803465_R | GTCTCGTGGGCTCGGTCCGTTGTCGTCTGTCACTC | 59.6 | 0.13 |
| mm4_intron_Tnks1bp1_chr2_85051188_F | Primer3: not found at this Tm | N.d. | 0.13 |
| mm4_intron_Tnks1bp1_chr2_85051188_R | Primer3: not found at this Tm | N.d. | 0.13 |
| mm4_intron_Tcof1_chr18_60840046_F | TCGTCGGCAGCGTCATGTGGTCGTCAATTGTGCC | 59.1 | 0.13 |
| mm4_intron_Tcof1_chr18_60840046_R | GTCTCGTGGGCTCGGCCTGAGATCCAAAGCACCGT | 60.0 | 0.13 |
| mm4_intergenic_Gm7847|Gm23674_chr18_25832282_F | Primer3: not found at this Tm | N.d. | 0.13 |
| mm4_intergenic_Gm7847|Gm23674_chr18_25832282_R | Primer3: not found at this Tm | N.d. | 0.13 |
| mm4_intergenic_Tulp1|Fkbp5_chr17_28368629_F | TCGTCGGCAGCGTCTGTCACGGATCAGGAAACGG | 60.0 | 0.12 |
| mm4_intergenic_Tulp1|Fkbp5_chr17_28368629_R | GTCTCGTGGGCTCGGTCCTGCCTGAAGCTTTCTCC | 59.6 | 0.12 |
| mm4_intron_Osbpl9_chr4_109195784_F | Primer3: not found at this Tm | N.d. | 0.12 |
| mm4_intron_Osbpl9_chr4_109195784_R | Primer3: not found at this Tm | N.d. | 0.12 |
| mm4_intergenic_Nrsn1|Tpi-rs8_chr13_25340875_F | Primer3: not found at this Tm | N.d. | 0.12 |
| mm4_intergenic_Nrsn1|Tpi-rs8_chr13_25340875_R | Primer3: not found at this Tm | N.d. | 0.12 |
| mm4_intron_Hrc_chr7_45337581_F | Primer3: not found at this Tm | N.d. | 0.12 |
| mm4_intron_Hrc_chr7_45337581_R | Primer3: not found at this Tm | N.d. | 0.12 |
| mm4_intergenic_Gm22882|Cxcl12_chr6_117001988_F | Primer3: not found at this Tm | N.d. | 0.12 |
| mm4_intergenic_Gm22882|Cxcl12_chr6_117001988_R | Primer3: not found at this Tm | N.d. | 0.12 |
| mm4_intron_Epsti1_chr14_77969923_F | Primer3: not found at this Tm | N.d. | 0.12 |
| mm4_intron_Epsti1_chr14_77969923_R | Primer3: not found at this Tm | N.d. | 0.12 |
| mm4_intron_Gm26691_chr3_133972342_F | Primer3: not found at this Tm | N.d. | 0.12 |
| mm4_intron_Gm26691_chr3_133972342_R | Primer3: not found at this Tm | N.d. | 0.12 |
| mm4_intergenic_Stac|Arpp21_chr9_111980501_F | Primer3: not found at this Tm | N.d. | 0.12 |
| mm4_intergenic_Stac|Arpp21_chr9_111980501_R | Primer3: not found at this Tm | N.d. | 0.12 |
| mm3_intergenic_Gm8793|Nkain2_chr10_32118854_F | Primer3: not found at this Tm | N.d. | 0.12 |
| mm3_intergenic_Gm8793|Nkain2_chr10_32118854_R | Primer3: not found at this Tm | N.d. | 0.12 |
| mm4_intergenic_Atp13a3|Tmem44_chr16_30507312_F | TCGTCGGCAGCGTCAGTCACAGGGCCTGTTGTTT | 59.7 | 0.12 |
| mm4_intergenic_Atp13a3|Tmem44_chr16_30507312_R | GTCTCGTGGGCTCGGTAGGTGACCAGAGGCCACTT | 60.1 | 0.12 |
| mm4_intergenic_Krt2|Krt1_chr15_101823890_F | Primer3: not found at this Tm | N.d. | 0.11 |
| mm4_intergenic_Krt2|Krt1_chr15_101823890_R | Primer3: not found at this Tm | N.d. | 0.11 |
| mm4_exon_Gpr98_chr13_81557298_F | TCGTCGGCAGCGTCACCTGTGAATCTGGCACCAC | 60.2 | 0.11 |
| mm4_exon_Gpr98_chr13_81557298_R | GTCTCGTGGGCTCGGAGAAACCCACTTCTAGGTTGTGA | 59.2 | 0.11 |
| mm4_intron_Kif26a_chr12_112165469_F | Primer3: not found at this Tm | N.d. | 0.11 |
| mm4_intron_Kif26a_chr12_112165469_R | Primer3: not found at this Tm | N.d. | 0.11 |
| mm4_intergenic_Gm7936|Gm24396_chr18_30721170_F | TCGTCGGCAGCGTCACAGAGTAAATGGACATCATTGCT | 58.4 | 0.11 |
| mm4_intergenic_Gm7936|Gm24396_chr18_30721170_R | GTCTCGTGGGCTCGGACCCATTCCCCAGAGCTTTC | 59.6 | 0.11 |
| mm4_intron_Synrg_chr11_84029678_F | TCGTCGGCAGCGTCGGCAGTAGGACCCATTTCCC | 60.1 | 0.11 |
| mm4_intron_Synrg_chr11_84029678_R | GTCTCGTGGGCTCGGCTGGAGTGACAGAGCAGAGC | 60.1 | 0.11 |
| mm4_intron_1700112E06Rik_chr14_22750657_F | Primer3: not found at this Tm | N.d. | 0.11 |
| mm4_intron_1700112E06Rik_chr14_22750657_R | Primer3: not found at this Tm | N.d. | 0.11 |
| mm4_intergenic_Polr1d|Gsx1_chr5_147123664_F | Primer3: not found at this Tm | N.d. | 0.11 |
| mm4_intergenic_Polr1d|Gsx1_chr5_147123664_R | Primer3: not found at this Tm | N.d. | 0.11 |
| mm4_intron_Nos1_chr5_117885366_F | TCGTCGGCAGCGTCTACCAAGGGACCACTTTGGC | 59.8 | 0.11 |
| mm4_intron_Nos1_chr5_117885366_R | GTCTCGTGGGCTCGGGAGAGCACACCCCAGTTCTC | 60.0 | 0.11 |
| mm4_intergenic_Epha8|Zbtb40_chr4_136969984_F | TCGTCGGCAGCGTCGGGAGGATAGTGATGGGGCT | 60.4 | 0.10 |
| mm4_intergenic_Epha8|Zbtb40_chr4_136969984_R | GTCTCGTGGGCTCGGACCAAACCAGAGGCCTCATG | 59.9 | 0.10 |
| mm4_intron_Coil_chr11_88984601_F | Primer3: not found at this Tm | N.d. | 0.10 |
| mm4_intron_Coil_chr11_88984601_R | Primer3: not found at this Tm | N.d. | 0.10 |
| mm4_intergenic_Gpr123|Kndc1_chr7_139888289_F | Primer3: not found at this Tm | N.d. | 0.10 |
| mm4_intergenic_Gpr123|Kndc1_chr7_139888289_R | Primer3: not found at this Tm | N.d. | 0.10 |
| mm4_intergenic_Ubl4b|Alx3_chr3_107574302_F | Primer3: not found at this Tm | N.d. | 0.10 |
| mm4_intergenic_Ubl4b|Alx3_chr3_107574302_R | Primer3: not found at this Tm | N.d. | 0.10 |
| mm4_intergenic_Fam167b|Eif3i_chr4_129584864_F | Primer3: not found at this Tm | N.d. | 0.10 |
| mm4_intergenic_Fam167b|Eif3i_chr4_129584864_R | Primer3: not found at this Tm | N.d. | 0.10 |
| mm4_intergenic_AC152827.1|1700001K19Rik_chr12_110674864_F | TCGTCGGCAGCGTCTCAAGAGAGGAGGCGCTCTA | 59.7 | 0.09 |
| mm4_intergenic_AC152827.1|1700001K19Rik_chr12_110674864_R | GTCTCGTGGGCTCGGAGCCAGACAGTTCACATGCA | 59.8 | 0.09 |
| mm4_intergenic_Gm17028|Lrriq1_chr10_103039967_F | TCGTCGGCAGCGTCCCATGTAAGATAAGTGCCTCCCA | 59.8 | 0.09 |
| mm4_intergenic_Gm17028|Lrriq1_chr10_103039967_R | GTCTCGTGGGCTCGGAGTGAAGAACTCTACCCCACA | 58.0 | 0.09 |
| mm3_intron_Sulf2_chr2_166109062_F | TCGTCGGCAGCGTCGATGCCTGGATCTGAGAGCC | 59.9 | 0.09 |
| mm3_intron_Sulf2_chr2_166109062_R | GTCTCGTGGGCTCGGGGACTTCTGTTCCAGCCTCC | 60.0 | 0.09 |
| mm4_intron_Col13a1_chr10_61876824_F | TCGTCGGCAGCGTCGGTCTGCTAACATGGCACCT | 60.0 | 0.09 |
| mm4_intron_Col13a1_chr10_61876824_R | GTCTCGTGGGCTCGGGCCAGGCAGGATCAGAAAGA | 59.7 | 0.09 |
| mm4_intergenic_n-R5s198|Gm13652_chr2_74974613_F | TCGTCGGCAGCGTCTTTCTGCGAGGTAGCTGAGC | 60.1 | 0.09 |
| mm4_intergenic_n-R5s198|Gm13652_chr2_74974613_R | GTCTCGTGGGCTCGGCCACATTTGCACTTTCCGCA | 59.9 | 0.09 |
| mm4_intergenic_Sox2ot|Gm20446_chr3_34220963_F | Primer3: not found at this Tm | N.d. | 0.09 |
| mm4_intergenic_Sox2ot|Gm20446_chr3_34220963_R | Primer3: not found at this Tm | N.d. | 0.09 |
| mm4_intergenic_Cxxc5|Gm23882_chr18_35868627_F | Primer3: not found at this Tm | N.d. | 0.09 |
| mm4_intergenic_Cxxc5|Gm23882_chr18_35868627_R | Primer3: not found at this Tm | N.d. | 0.09 |
| mm4_intron_Fam178b_chr1_36595721_F | TCGTCGGCAGCGTCCTCCTCTGAAGGCCACAGTG | 60.0 | 0.09 |
| mm4_intron_Fam178b_chr1_36595721_R | GTCTCGTGGGCTCGGTATGGGCTGTGCTTGCTTCA | 59.9 | 0.09 |
| mm4_intergenic_Usp3|Car12_chr9_66694851_F | TCGTCGGCAGCGTCGGGCCAGACTCTTTTGGGAT | 59.6 | 0.09 |
| mm4_intergenic_Usp3|Car12_chr9_66694851_R | GTCTCGTGGGCTCGGACACTCAGTCTCCCTGGACT | 59.5 | 0.09 |
| mm4_intron_Has2os_chr15_56692955_F | TCGTCGGCAGCGTCTATCCCGTGTCTGGCTCTCT | 59.7 | 0.09 |
| mm4_intron_Has2os_chr15_56692955_R | GTCTCGTGGGCTCGGTTCTTTCCTCCGTTGCAGCT | 59.8 | 0.09 |
| mm4_intron_Asb3_chr11_31079769_F | Primer3: not found at this Tm | N.d. | 0.09 |
| mm4_intron_Asb3_chr11_31079769_R | Primer3: not found at this Tm | N.d. | 0.09 |
| mm4_intron_Capn2_chr1_182517029_F | Primer3: not found at this Tm | N.d. | 0.09 |
| mm4_intron_Capn2_chr1_182517029_R | Primer3: not found at this Tm | N.d. | 0.09 |
| mm3_intergenic_Tox2|Jph2_chr2_163325455_F | TCGTCGGCAGCGTCACCTTCCTTCAGAAAGCATCCT | 59.3 | 0.09 |
| mm3_intergenic_Tox2|Jph2_chr2_163325455_R | GTCTCGTGGGCTCGGCTTCTGCCCTTCCTCACCAT | 59.3 | 0.09 |
| mm3_intron_Mapkap1_chr2_34469881_F | TCGTCGGCAGCGTCCCATGCTAGGCTACTCGCTC | 60.0 | 0.09 |
| mm3_intron_Mapkap1_chr2_34469881_R | GTCTCGTGGGCTCGGAGTTTCTACACAGGAAAGGGAAC | 58.2 | 0.09 |
| mm4_intergenic_A530006G24Rik|Gm25516_chr2_147732992_F | Primer3: not found at this Tm | N.d. | 0.08 |
| mm4_intergenic_A530006G24Rik|Gm25516_chr2_147732992_R | Primer3: not found at this Tm | N.d. | 0.08 |
| mm4_intron_Igf2bp2_chr16_22067857_F | TCGTCGGCAGCGTCTTTGCGTTCCCACAGTCTGT | 60.1 | 0.08 |
| mm4_intron_Igf2bp2_chr16_22067857_R | GTCTCGTGGGCTCGGGAAGGCCCACATGAGCAGAA | 60.3 | 0.08 |
| mm4_intergenic_Grap2|Fam83f_chr15_80666873_F | TCGTCGGCAGCGTCGAGGTTTCTATTGCTTGTCCCC | 58.9 | 0.08 |
| mm4_intergenic_Grap2|Fam83f_chr15_80666873_R | GTCTCGTGGGCTCGGAGTGATGCTCCAAGACTTTTAGAGT | 59.9 | 0.08 |
| mm3_intergenic_Gm24774|Pcdh17_chr14_84048271_F | Primer3: not found at this Tm | N.d. | 0.08 |
| mm3_intergenic_Gm24774|Pcdh17_chr14_84048271_R | Primer3: not found at this Tm | N.d. | 0.08 |
| mm4_exon_Hmcn2_chr2_31361006_F | Primer3: not found at this Tm | N.d. | 0.08 |
| mm4_exon_Hmcn2_chr2_31361006_R | Primer3: not found at this Tm | N.d. | 0.08 |
| mm4_intergenic_Gm7910|Khdrbs2_chr1_31969124_F | Primer3: not found at this Tm | N.d. | 0.08 |
| mm4_intergenic_Gm7910|Khdrbs2_chr1_31969124_R | Primer3: not found at this Tm | N.d. | 0.08 |
| mm2_intergenic_Nmd3|Sptssb_chr3_69761547_F | TCGTCGGCAGCGTCGTGCAGGCATGTACCTCTCA | 59.7 | 0.08 |
| mm2_intergenic_Nmd3|Sptssb_chr3_69761547_R | GTCTCGTGGGCTCGGGCACCATGCACCTTCGAGA | 60.3 | 0.08 |
| mm4_intergenic_S100a7a|S100a8_chr3_90668265_F | TCGTCGGCAGCGTCACTTGACCCCTCACCATCCT | 60.1 | 0.08 |
| mm4_intergenic_S100a7a|S100a8_chr3_90668265_R | GTCTCGTGGGCTCGGCCCTCAGCTGCCACTAAGTC | 60.1 | 0.08 |
| mm4_intron_Unc5b_chr10_60803232_F | TCGTCGGCAGCGTCTTTACCCTTGGGCTGAAGGC | 60.2 | 0.08 |
| mm4_intron_Unc5b_chr10_60803232_R | GTCTCGTGGGCTCGGAGTGGTTCCTGGAGTCCCAT | 60.1 | 0.08 |
| mm4_intron_Plxnc1_chr10_94806642_F | TCGTCGGCAGCGTCACCTTTTCTGTCGGGAGCAG | 59.9 | 0.08 |
| mm4_intron_Plxnc1_chr10_94806642_R | GTCTCGTGGGCTCGGTAAGGCCAGCAGAGCAAAGC | 60.9 | 0.08 |
| mm4_intron_4833422M21Rik_chr15_96248391_F | TCGTCGGCAGCGTCACCTCTACGAGCCTCAACCA | 60.2 | 0.07 |
| mm4_intron_4833422M21Rik_chr15_96248391_R | GTCTCGTGGGCTCGGAACAAACGGCAGATGACACG | 59.4 | 0.07 |
| mm4_intergenic_Id2|Gm22527_chr12_25113822_F | TCGTCGGCAGCGTCACATTCCTCCTGATGCTCCT | 58.1 | 0.07 |
| mm4_intergenic_Id2|Gm22527_chr12_25113822_R | GTCTCGTGGGCTCGGTGAGGTTTTCTCCAAGCCCA | 59.1 | 0.07 |
| mm4_intergenic_Gm10750|Gm14135_chr2_149180799_F | Primer3: not found at this Tm | N.d. | 0.07 |
| mm4_intergenic_Gm10750|Gm14135_chr2_149180799_R | Primer3: not found at this Tm | N.d. | 0.07 |
| mm4_intergenic_Uncx|Micall2_chr5_139702392_F | Primer3: not found at this Tm | N.d. | 0.07 |
| mm4_intergenic_Uncx|Micall2_chr5_139702392_R | Primer3: not found at this Tm | N.d. | 0.07 |
| mm4_intron_Gria4_chr9_4659898_F | Primer3: not found at this Tm | N.d. | 0.07 |
| mm4_intron_Gria4_chr9_4659898_R | Primer3: not found at this Tm | N.d. | 0.07 |
| mm4_intron_Lig1_chr7_13300780_F | Primer3: not found at this Tm | N.d. | 0.07 |
| mm4_intron_Lig1_chr7_13300780_R | Primer3: not found at this Tm | N.d. | 0.07 |
| mm4_intron_Fhod3_chr18_24794781_F | Primer3: not found at this Tm | N.d. | 0.07 |
| mm4_intron_Fhod3_chr18_24794781_R | Primer3: not found at this Tm | N.d. | 0.07 |
| mm4_intron_Ces1e_chr8_93203169_F | TCGTCGGCAGCGTCACAGAAGCCTTGGAACGCAA | 60.4 | 0.07 |
| mm4_intron_Ces1e_chr8_93203169_R | GTCTCGTGGGCTCGGCTACTCTGTCTTTGGGGCCC | 59.7 | 0.07 |
| mm4_intron_Itpr3_chr17_27082610_F | TCGTCGGCAGCGTCGCATTCCTCCAGTCAACGGA | 60.0 | 0.06 |
| mm4_intron_Itpr3_chr17_27082610_R | GTCTCGTGGGCTCGGACATCCCAAAGGCATGATCCA | 59.7 | 0.06 |
| mm4_intergenic_Mir200a|Mir200b_chr4_156055630_F | TCGTCGGCAGCGTCAACTCTTTGCCCCATAGCCC | 60.0 | 0.06 |
| mm4_intergenic_Mir200a|Mir200b_chr4_156055630_R | GTCTCGTGGGCTCGGTGGTAATGATGACGGCGGAG | 59.8 | 0.06 |
| mm4_intron_Sntg2_chr12_30349602_F | TCGTCGGCAGCGTCCCAGTGCTGAGTGAGAGGTG | 60.0 | 0.06 |
| mm4_intron_Sntg2_chr12_30349602_R | GTCTCGTGGGCTCGGCCTCTTCTCGATGTTCCCTGT | 59.1 | 0.06 |
| mm4_intron_Nxph2_chr2_23396319_F | Primer3: not found at this Tm | N.d. | 0.06 |
| mm4_intron_Nxph2_chr2_23396319_R | Primer3: not found at this Tm | N.d. | 0.06 |
| mm4_intron_Syne1_chr10_5028486_F | TCGTCGGCAGCGTCAGGCAAACATCCCCTCTGTG | 59.9 | 0.06 |
| mm4_intron_Syne1_chr10_5028486_R | GTCTCGTGGGCTCGGAAACACCTTGGCAAACGAGC | 59.8 | 0.06 |
| mm4_exon_Lrch4/Gm20605_chr5_137638659_F | TCGTCGGCAGCGTCGCCTGAAGGAAGAATGGGCT | 60.0 | 0.06 |
| mm4_exon_Lrch4/Gm20605_chr5_137638659_R | GTCTCGTGGGCTCGGGACCGGAAGAGGAAGCTGTT | 59.6 | 0.06 |
| mm4_intergenic_Anks1|Gm15597_chr17_27930125_F | Primer3: not found at this Tm | N.d. | 0.06 |
| mm4_intergenic_Anks1|Gm15597_chr17_27930125_R | Primer3: not found at this Tm | N.d. | 0.06 |
| mm4_intron_Rbfox1_chr16_7033968_F | TCGTCGGCAGCGTCGTCCTTTGAGAGAAGCCTCCC | 60.0 | 0.06 |
| mm4_intron_Rbfox1_chr16_7033968_R | GTCTCGTGGGCTCGGAGAGACAGGAAGTGAACACAACA | 59.8 | 0.06 |
| mm4_intergenic_Gm26831|Gm8321_chr1_119119769_F | TCGTCGGCAGCGTCTTTGCTCCAGGCCGATAAGG | 60.1 | 0.06 |
| mm4_intergenic_Gm26831|Gm8321_chr1_119119769_R | GTCTCGTGGGCTCGGCACAGCTGGTGCAGATTGC | 59.7 | 0.06 |
| mm2_exon_Cerk/Gm15569_chr15_86185882_F | TCGTCGGCAGCGTCGAAGCTAGACTTGGGGCCAG | 60.1 | 0.06 |
| mm2_exon_Cerk/Gm15569_chr15_86185882_R | GTCTCGTGGGCTCGGTCCCTCCCGTTCCTTCCTAG | 60.0 | 0.06 |
| mm3_intergenic_Ccr3|Ccr2_chr9_124051335_F | TCGTCGGCAGCGTCAGAGGGGAGTTCAGCTCGTA | 59.6 | 0.06 |
| mm3_intergenic_Ccr3|Ccr2_chr9_124051335_R | GTCTCGTGGGCTCGGATGGAGAGGCAGGAGAGAGG | 60.1 | 0.06 |
| mm4_intron_4632428C04Rik_chr16_30008996_F | Primer3: not found at this Tm | N.d. | 0.06 |
| mm4_intron_4632428C04Rik_chr16_30008996_R | Primer3: not found at this Tm | N.d. | 0.06 |
| mm4_intergenic_Crk|Ywhae_chr11_75727607_F | Primer3: not found at this Tm | N.d. | 0.06 |
| mm4_intergenic_Crk|Ywhae_chr11_75727607_R | Primer3: not found at this Tm | N.d. | 0.06 |
| mm4_intergenic_2810055G20Rik|Gm17333_chr16_77827499_F | Primer3: not found at this Tm | N.d. | 0.05 |
| mm4_intergenic_2810055G20Rik|Gm17333_chr16_77827499_R | Primer3: not found at this Tm | N.d. | 0.05 |
| mm4_intergenic_Gm26676|Kcng2_chr18_80340268_F | TCGTCGGCAGCGTCATCCCACCCATCCACAGAGA | 59.9 | 0.05 |
| mm4_intergenic_Gm26676|Kcng2_chr18_80340268_R | GTCTCGTGGGCTCGGTAGTTGCACAGCCCATGAGG | 60.0 | 0.05 |
| mm3_intergenic_Gm27030|Gm23299_chr8_121665433_F | TCGTCGGCAGCGTCAGAGCCTAGACTCCAGGAGC | 60.1 | 0.05 |
| mm3_intergenic_Gm27030|Gm23299_chr8_121665433_R | GTCTCGTGGGCTCGGGAGGAGGCGGAAGTCAGTG | 59.7 | 0.05 |
| mm4_intergenic_Gm5239|Snhg4_chr18_35540253_F | TCGTCGGCAGCGTCCTGCTGCTCATCCGAGGAAA | 60.1 | 0.05 |
| mm4_intergenic_Gm5239|Snhg4_chr18_35540253_R | GTCTCGTGGGCTCGGCTCTTGAGACCCACAGCCAG | 60.0 | 0.05 |
| mm4_intron_Ctsz_chr2_174436153_F | TCGTCGGCAGCGTCGTGTGGTACAGCGAGGGAC | 60.0 | 0.05 |
| mm4_intron_Ctsz_chr2_174436153_R | GTCTCGTGGGCTCGGCTCACTTCCGCATTGCCTCA | 60.6 | 0.05 |
| mm4_intron_Scn2b_chr9_45118779_F | TCGTCGGCAGCGTCAGAGTAGCTGCTACCGAGGC | 61.1 | 0.05 |
| mm4_intron_Scn2b_chr9_45118779_R | GTCTCGTGGGCTCGGGGACCACGGAGACTGGTTTT | 59.8 | 0.05 |
| mm4_intergenic_Wdr11|Gm23847_chr7_129639318_F | TCGTCGGCAGCGTCCAGGCAAAGGAGAGTGAGCA | 59.9 | 0.05 |
| mm4_intergenic_Wdr11|Gm23847_chr7_129639318_R | GTCTCGTGGGCTCGGTGCTGTGTGAGTCAGGTGAC | 59.8 | 0.05 |
| mm4_intergenic_Sp7|Gm23590_chr15_102370867_F | TCGTCGGCAGCGTCGGACCTACCTCCACTCTCACA | 60.2 | 0.05 |
| mm4_intergenic_Sp7|Gm23590_chr15_102370867_R | GTCTCGTGGGCTCGGGGGGTTTATACTGGAAGGGCC | 60.1 | 0.05 |
| mm4_intron_1700113H08Rik_chr10_87094048_F | TCGTCGGCAGCGTCACTCAGCGAACAACAGCAGA | 59.8 | 0.05 |
| mm4_intron_1700113H08Rik_chr10_87094048_R | GTCTCGTGGGCTCGGTGTGTACTTTCCCACCTGGC | 59.8 | 0.05 |
| mm4_intergenic_Gm6031|Ube2v2_chr16_15480316_F | Primer3: not found at this Tm | N.d. | 0.05 |
| mm4_intergenic_Gm6031|Ube2v2_chr16_15480316_R | Primer3: not found at this Tm | N.d. | 0.05 |
| mm4_intergenic_8430427H17Rik|Commd7_chr2_153555800_F | TCGTCGGCAGCGTCCGAGCTGGAGGTCCTTACTG | 59.5 | 0.05 |
| mm4_intergenic_8430427H17Rik|Commd7_chr2_153555800_R | GTCTCGTGGGCTCGGAGTCCACCTCGAATCCCTGT | 60.2 | 0.05 |
| mm4_intron_Cdc42ep1_chr15_78846150_F | Primer3: not found at this Tm | N.d. | 0.05 |
| mm4_intron_Cdc42ep1_chr15_78846150_R | Primer3: not found at this Tm | N.d. | 0.05 |
| mm4_intergenic_Gli3|Inhba_chr13_15815124_F | TCGTCGGCAGCGTCTGTAGGCATCATGACAGGCC | 59.8 | 0.04 |
| mm4_intergenic_Gli3|Inhba_chr13_15815124_R | GTCTCGTGGGCTCGGGTTCTCTGCTCCTCTGCCTG | 60.1 | 0.04 |
| mm4_intergenic_Gm14314|Gm14292_chr2_179107325_F | Primer3: not found at this Tm | N.d. | 0.04 |
| mm4_intergenic_Gm14314|Gm14292_chr2_179107325_R | Primer3: not found at this Tm | N.d. | 0.04 |
| mm3_intron_Ywhag_chr5_135923253_F | TCGTCGGCAGCGTCGTGGGAGGGAAACAAGGAGC | 60.6 | 0.04 |
| mm3_intron_Ywhag_chr5_135923253_R | GTCTCGTGGGCTCGGTTTCAGTAGGCAGCAGGGTG | 59.9 | 0.04 |
| mm2_exon_Neurl1b_chr17_26441866_F | Primer3: not found at this Tm | N.d. | 0.04 |
| mm2_exon_Neurl1b_chr17_26441866_R | Primer3: not found at this Tm | N.d. | 0.04 |
| mm4_intron_Frmd5_chr2_121549601_F | TCGTCGGCAGCGTCGGGATGCAGGGCACATAAGT | 60.1 | 0.04 |
| mm4_intron_Frmd5_chr2_121549601_R | GTCTCGTGGGCTCGGCGGCCGCATCAGGAAATACA | 60.8 | 0.04 |
| mm4_intron_Itpkc_chr7_27223246_F | TCGTCGGCAGCGTCAAAGGAAGGGCAGGCAATGG | 60.9 | 0.04 |
| mm4_intron_Itpkc_chr7_27223246_R | GTCTCGTGGGCTCGGCCTCCCTCCTGTTTGGGTTT | 59.5 | 0.04 |
| mm4_intergenic_Gnaq|E030024N20Rik_chr19_16137304_F | Primer3: not found at this Tm | N.d. | 0.04 |
| mm4_intergenic_Gnaq|E030024N20Rik_chr19_16137304_R | Primer3: not found at this Tm | N.d. | 0.04 |
| mm4_intron_Alg8_chr7_97385091_F | TCGTCGGCAGCGTCTGGCCTTGAGCAGGTTACTC | 59.6 | 0.04 |
| mm4_intron_Alg8_chr7_97385091_R | GTCTCGTGGGCTCGGTCCCTGTAAGTACATAACAGAAACT | 57.4 | 0.04 |
| mm4_exon_Lmtk3_chr7_45794485_F | TCGTCGGCAGCGTCGCCGAGGAGGAAGGGGTC | 61.4 | 0.04 |
| mm4_exon_Lmtk3_chr7_45794485_R | GTCTCGTGGGCTCGGACCTGAACTACAAAGGTTGGCT | 59.8 | 0.04 |
| mm4_intergenic_Gm25658|Atp2b1_chr10_98738097_F | Primer3: not found at this Tm | N.d. | 0.04 |
| mm4_intergenic_Gm25658|Atp2b1_chr10_98738097_R | Primer3: not found at this Tm | N.d. | 0.04 |
| mm4_intergenic_Gm5432|Lpin1_chr12_16088806_F | TCGTCGGCAGCGTCTGGCATTCACACCACTGTCA | 59.8 | 0.04 |
| mm4_intergenic_Gm5432|Lpin1_chr12_16088806_R | GTCTCGTGGGCTCGGTCTTGCCTGTGAAGAGCCAA | 59.5 | 0.04 |
| mm4_intergenic_Gm25199|Syt6_chr3_103469355_F | TCGTCGGCAGCGTCGGGCTTGTGAGGACTTGCAT | 60.6 | 0.04 |
| mm4_intergenic_Gm25199|Syt6_chr3_103469355_R | GTCTCGTGGGCTCGGCTCCCTGACACTCTCATGCC | 59.8 | 0.04 |
| mm4_intron_Gm13026_chr4_140452723_F | TCGTCGGCAGCGTCATCCTGGCCGTGTAAACAGG | 60.0 | 0.04 |
| mm4_intron_Gm13026_chr4_140452723_R | GTCTCGTGGGCTCGGTACGATGCGTGCCTTTGACT | 60.0 | 0.04 |
| mm4_intergenic_Gm22602|Anks1b_chr10_90455147_F | Primer3: not found at this Tm | N.d. | 0.04 |
| mm4_intergenic_Gm22602|Anks1b_chr10_90455147_R | Primer3: not found at this Tm | N.d. | 0.04 |
| mm4_intergenic_Gm25722|Gm10051_chr5_132804882_F | TCGTCGGCAGCGTCATTATCTGGGAGCCCTGGGG | 60.7 | 0.04 |
| mm4_intergenic_Gm25722|Gm10051_chr5_132804882_R | GTCTCGTGGGCTCGGTGACACACCCCAATGCTTGT | 60.1 | 0.04 |
| mm4_intron_Skint5_chr4_113883591_F | Primer3: not found at this Tm | N.d. | 0.04 |
| mm4_intron_Skint5_chr4_113883591_R | Primer3: not found at this Tm | N.d. | 0.04 |
| mm4_intergenic_Rpl21-ps13|mmu-mir-6401_chr7_139757084_F | Primer3: not found at this Tm | N.d. | 0.04 |
| mm4_intergenic_Rpl21-ps13|mmu-mir-6401_chr7_139757084_R | Primer3: not found at this Tm | N.d. | 0.04 |
| mm3_exon_Cdk5rap2_chr4_70220879_F | TCGTCGGCAGCGTCGAACTCCCAGAGGTTCAGCC | 60.0 | 0.03 |
| mm3_exon_Cdk5rap2_chr4_70220879_R | GTCTCGTGGGCTCGGCCTTACCTGGCACATGCGTA | 60.1 | 0.03 |
| mm4_intergenic_Cox7a2|Tmem30a_chr9_79765906_F | Primer3: not found at this Tm | N.d. | 0.03 |
| mm4_intergenic_Cox7a2|Tmem30a_chr9_79765906_R | Primer3: not found at this Tm | N.d. | 0.03 |
| mm4_intergenic_Ric8b|Fhl4_chr10_85038417_F | TCGTCGGCAGCGTCGAGGCCTGGGAAAGTACTGG | 59.7 | 0.03 |
| mm4_intergenic_Ric8b|Fhl4_chr10_85038417_R | GTCTCGTGGGCTCGGTGTCTGCGTGCTACACTCAC | 60.3 | 0.03 |
| mm4_intron_Ptgfrn_chr3_101109966_F | Primer3: not found at this Tm | N.d. | 0.03 |
| mm4_intron_Ptgfrn_chr3_101109966_R | Primer3: not found at this Tm | N.d. | 0.03 |
| mm4_intergenic_Pgrmc2|Gm25487_chr3_41430580_F | TCGTCGGCAGCGTCAAACCTGGAAGCAGTGTCCC | 60.1 | 0.03 |
| mm4_intergenic_Pgrmc2|Gm25487_chr3_41430580_R | GTCTCGTGGGCTCGGGCCACACATGTCCAACACAC | 59.9 | 0.03 |
| mm4_intergenic_Dcc|Gm25509_chr18_72668980_F | Primer3: not found at this Tm | N.d. | 0.03 |
| mm4_intergenic_Dcc|Gm25509_chr18_72668980_R | Primer3: not found at this Tm | N.d. | 0.03 |
| mm4_intergenic_Gm25715|N6amt1_chr16_86846237_F | Primer3: not found at this Tm | N.d. | 0.03 |
| mm4_intergenic_Gm25715|N6amt1_chr16_86846237_R | Primer3: not found at this Tm | N.d. | 0.03 |
| mm4_intergenic_4922501C03Rik|Tbx18_chr9_87396285_F | Primer3: not found at this Tm | N.d. | 0.03 |
| mm4_intergenic_4922501C03Rik|Tbx18_chr9_87396285_R | Primer3: not found at this Tm | N.d. | 0.03 |
| mm4_intergenic_Tm9sf4|Tspyl3_chr2_153219093_F | TCGTCGGCAGCGTCGTTCACAGCCGTCTCTCCTG | 60.3 | 0.03 |
| mm4_intergenic_Tm9sf4|Tspyl3_chr2_153219093_R | GTCTCGTGGGCTCGGGGGCTGTAGACAAAGACATGGA | 60.0 | 0.03 |
| mm4_intergenic_Rmi2|Gm21859_chr16_10910731_F | TCGTCGGCAGCGTCTTTTCCATGACGGCAATGGC | 59.7 | 0.03 |
| mm4_intergenic_Rmi2|Gm21859_chr16_10910731_R | GTCTCGTGGGCTCGGATGCTGTCAGTTCCTGGCTC | 60.0 | 0.03 |
| mm4_intergenic_Sh3tc1|Ablim2_chr5_35756060_F | TCGTCGGCAGCGTCATCAGCGCTGCCTTGGTTAT | 60.1 | 0.03 |
| mm4_intergenic_Sh3tc1|Ablim2_chr5_35756060_R | GTCTCGTGGGCTCGGGGGCTGAATGACCCAGAACA | 59.9 | 0.03 |
| mm4_intergenic_Gm10710|Gm22342_chr3_83461639_F | Primer3: not found at this Tm | N.d. | 0.03 |
| mm4_intergenic_Gm10710|Gm22342_chr3_83461639_R | Primer3: not found at this Tm | N.d. | 0.03 |
| mm3_intergenic_Nkain1|Pum1_chr4_130648415_F | Primer3: not found at this Tm | N.d. | 0.03 |
| mm3_intergenic_Nkain1|Pum1_chr4_130648415_R | Primer3: not found at this Tm | N.d. | 0.03 |
| mm2_intergenic_1700123L14Rik|Gm22971_chr6_96438087_F | TCGTCGGCAGCGTCGCTGTGCAAAGCTCACTGAA | 59.3 | 0.03 |
| mm2_intergenic_1700123L14Rik|Gm22971_chr6_96438087_R | GTCTCGTGGGCTCGGTCTGGGTTTGACTCCCCTCA | 60.1 | 0.03 |
| mm4_exon_Fgd5_chr6_91986940_F | Primer3: not found at this Tm | N.d. | 0.03 |
| mm4_exon_Fgd5_chr6_91986940_R | Primer3: not found at this Tm | N.d. | 0.03 |
| mm4_intergenic_Rnf43|Gm25968_chr11_87683450_F | Primer3: not found at this Tm | N.d. | 0.03 |
| mm4_intergenic_Rnf43|Gm25968_chr11_87683450_R | Primer3: not found at this Tm | N.d. | 0.03 |
| mm3_intron_Gm16386_chr17_22805339_F | TCGTCGGCAGCGTCTTGAAGGGTCTCACAGGTGC | 59.8 | 0.03 |
| mm3_intron_Gm16386_chr17_22805339_R | GTCTCGTGGGCTCGGAGGGTGAATATGTGGGCTGT | 58.7 | 0.03 |
| mm4_intron_Cacna2d3_chr14_29488735_F | TCGTCGGCAGCGTCGGAGAGGGACAATGGCCAAA | 59.9 | 0.02 |
| mm4_intron_Cacna2d3_chr14_29488735_R | GTCTCGTGGGCTCGGGCTAGCAATGATGGTGCAGC | 59.9 | 0.02 |
| mm4_intergenic_Kcnh8|Efhb_chr17_53243723_F | TCGTCGGCAGCGTCATGAGGTTCTGCACAACACT | 57.3 | 0.02 |
| mm4_intergenic_Kcnh8|Efhb_chr17_53243723_R | GTCTCGTGGGCTCGGCGCAAGCCCTGCTTCTAAAC | 59.8 | 0.02 |
| mm4_intergenic_Agbl1|Gm23239_chr7_77509501_F | Primer3: not found at this Tm | N.d. | 0.02 |
| mm4_intergenic_Agbl1|Gm23239_chr7_77509501_R | Primer3: not found at this Tm | N.d. | 0.02 |
| mm4_intron_Clnk_chr5_38852870_F | Primer3: not found at this Tm | N.d. | 0.02 |
| mm4_intron_Clnk_chr5_38852870_R | Primer3: not found at this Tm | N.d. | 0.02 |
| mm4_intergenic_Fgf10|Nnt_chr13_119176811_F | TCGTCGGCAGCGTCAGGGCATTGTTGTCAGAGGT | 59.2 | 0.02 |
| mm4_intergenic_Fgf10|Nnt_chr13_119176811_R | GTCTCGTGGGCTCGGGAACAGCCAGGTGAGGATCC | 60.1 | 0.02 |
| mm4_intergenic_Gm13029|Igsf21_chr4_140151172_F | TCGTCGGCAGCGTCCAGGAAGAGGCAAGGGACAG | 60.0 | 0.02 |
| mm4_intergenic_Gm13029|Igsf21_chr4_140151172_R | GTCTCGTGGGCTCGGACCACAGTGCATGTCCCAAA | 60.1 | 0.02 |
| mm4_intergenic_Gm11434|Gm12576_chr11_83806003_F | Primer3: not found at this Tm | N.d. | 0.02 |
| mm4_intergenic_Gm11434|Gm12576_chr11_83806003_R | Primer3: not found at this Tm | N.d. | 0.02 |
| mm3_intron_Mvd_chr8_122443067_F | TCGTCGGCAGCGTCCAGTGACCCTCATCTCCAGC | 59.8 | 0.02 |
| mm3_intron_Mvd_chr8_122443067_R | GTCTCGTGGGCTCGGATGGGCACAGTGGTGGAAAT | 59.8 | 0.02 |
| mm3_intergenic_Smarcal1|Ankar_chr1_72634189_F | Primer3: not found at this Tm | N.d. | 0.02 |
| mm3_intergenic_Smarcal1|Ankar_chr1_72634189_R | Primer3: not found at this Tm | N.d. | 0.02 |
| mm3_intergenic_Hlcs|Gm23062_chr16_94164325_F | Primer3: not found at this Tm | N.d. | 0.02 |
| mm3_intergenic_Hlcs|Gm23062_chr16_94164325_R | Primer3: not found at this Tm | N.d. | 0.02 |
| mm4_intergenic_Eya4|Rps12_chr10_23682086_F | Primer3: not found at this Tm | N.d. | 0.02 |
| mm4_intergenic_Eya4|Rps12_chr10_23682086_R | Primer3: not found at this Tm | N.d. | 0.02 |
| mm3_intergenic_Gm23514|5730522E02Rik_chr11_25688978_F | TCGTCGGCAGCGTCCAAGTGTTGCTGGGCTAGGA | 59.9 | 0.02 |
| mm3_intergenic_Gm23514|5730522E02Rik_chr11_25688978_R | GTCTCGTGGGCTCGGTCTGTCCTTGGCCTCTCCTT | 60.1 | 0.02 |
| mm4_intergenic_Rab11fip4|Gm23293_chr11_79593923_F | TCGTCGGCAGCGTCACATTTTACCAACTGCCCTGG | 58.7 | 0.02 |
| mm4_intergenic_Rab11fip4|Gm23293_chr11_79593923_R | GTCTCGTGGGCTCGGTGGGTTTCTCCTGTATGGGG | 58.7 | 0.02 |
| mm4_intergenic_2610528J11Rik|Tmem125_chr4_118537782_F | TCGTCGGCAGCGTCCCCCTAAATGGCTACGGTCC | 59.8 | 0.02 |
| mm4_intergenic_2610528J11Rik|Tmem125_chr4_118537782_R | GTCTCGTGGGCTCGGGCCTGAGGAGGAAACGACAG | 60.3 | 0.02 |
| mm4_intergenic_Chrm3|Gm26861_chr13_10051951_F | Primer3: not found at this Tm | N.d. | 0.02 |
| mm4_intergenic_Chrm3|Gm26861_chr13_10051951_R | Primer3: not found at this Tm | N.d. | 0.02 |
| mm4_intergenic_Gm1604b|Rps6ka2_chr17_7147559_F | Primer3: not found at this Tm | N.d. | 0.02 |
| mm4_intergenic_Gm1604b|Rps6ka2_chr17_7147559_R | Primer3: not found at this Tm | N.d. | 0.02 |
| mm4_intergenic_Gm22539|1700080O16Rik_chrX_51886203_F | TCGTCGGCAGCGTCAGCTCTATCCTTTGCTCGGC | 59.8 | 0.01 |
| mm4_intergenic_Gm22539|1700080O16Rik_chrX_51886203_R | GTCTCGTGGGCTCGGTTTCCACCAATCAGCGCTCA | 60.2 | 0.01 |
| mm4_exon_9130213A22Rik/Hes7_chr11_69121383_F | Primer3: not found at this Tm | N.d. | 0.01 |
| mm4_exon_9130213A22Rik/Hes7_chr11_69121383_R | Primer3: not found at this Tm | N.d. | 0.01 |
| mm4_exon_2310045N01Rik_chr8_70147067_F | TCGTCGGCAGCGTCAGGCACTGGAGTCTCACTCT | 59.8 | 0.01 |
| mm4_exon_2310045N01Rik_chr8_70147067_R | GTCTCGTGGGCTCGGGGCAGAATCAGTAGGCAGCA | 60.1 | 0.01 |
| mm4_intron_Rev1_chr1_38102181_F | TCGTCGGCAGCGTCTGCTCCCTCAACAACAAGCT | 59.8 | 0.01 |
| mm4_intron_Rev1_chr1_38102181_R | GTCTCGTGGGCTCGGACATTGTTTAATGGCGTAAGGAA | 57.0 | 0.01 |
| mm4_intergenic_Samd4|Gm10371_chr14_47097517_F | TCGTCGGCAGCGTCTGCCCGTAAAACACACCAGT | 60.1 | 0.01 |
| mm4_intergenic_Samd4|Gm10371_chr14_47097517_R | GTCTCGTGGGCTCGGTGCAGGGGAAGGTCAGTTTC | 59.8 | 0.01 |
| mm4_intron_Polq_chr16_37052442_F | Primer3: not found at this Tm | N.d. | 0.01 |
| mm4_intron_Polq_chr16_37052442_R | Primer3: not found at this Tm | N.d. | 0.01 |
| mm4_intergenic_Tdrd3|Rps3a2_chr14_87699453_F | Primer3: not found at this Tm | N.d. | 0.01 |
| mm4_intergenic_Tdrd3|Rps3a2_chr14_87699453_R | Primer3: not found at this Tm | N.d. | 0.01 |
| mm4_intron_Fam19a5_chr15_87728715_F | TCGTCGGCAGCGTCTTCCTGAGCTCTGACCCTGA | 59.8 | 0.01 |
| mm4_intron_Fam19a5_chr15_87728715_R | GTCTCGTGGGCTCGGCGCAGAACTGGCTAAGGACA | 60.0 | 0.01 |
| mm4_intergenic_Prdm16|B230104I21Rik_chr4_154346758_F | TCGTCGGCAGCGTCTGGGGAATGCTAGAGAGGGT | 59.6 | 0.01 |
| mm4_intergenic_Prdm16|B230104I21Rik_chr4_154346758_R | GTCTCGTGGGCTCGGCCGGGGACAGAAGAGGTAGA | 60.0 | 0.01 |
| mm4_intron_Meis2_chr2_115914349_F | TCGTCGGCAGCGTCCCCTGGAGACAAGGCAGTAT | 58.7 | 0.01 |
| mm4_intron_Meis2_chr2_115914349_R | GTCTCGTGGGCTCGGCTAGAGAGCTTTGCCTGTGC | 58.6 | 0.01 |
| mm4_intergenic_Ccdc114|Abcc6_chr7_45972754_F | TCGTCGGCAGCGTCGGGTGTGTGCTGATGACTCT | 59.6 | 0.01 |
| mm4_intergenic_Ccdc114|Abcc6_chr7_45972754_R | GTCTCGTGGGCTCGGTGGGGACAGACCTGATCCTG | 60.6 | 0.01 |
| mm4_intron_Ggh_chr4_20062973_F | TCGTCGGCAGCGTCGAGCTCTGTGTCTGGAGCTG | 60.1 | 0.01 |
| mm4_intron_Ggh_chr4_20062973_R | GTCTCGTGGGCTCGGCACACCCCACTCACTAGCTG | 60.0 | 0.01 |
| mm4_intergenic_Gm23892|Gm25382_chr10_16441819_F | TCGTCGGCAGCGTCTTGGAGCACCACCCAATTGT | 60.1 | 0.01 |
| mm4_intergenic_Gm23892|Gm25382_chr10_16441819_R | GTCTCGTGGGCTCGGATGCCCTGCCTTCTTGACTG | 60.3 | 0.01 |
| mm4_intron_Aldh1l1_chr6_90566929_F | TCGTCGGCAGCGTCATTGCCTCTGTCCCGAGTTG | 60.0 | 0.01 |
| mm4_intron_Aldh1l1_chr6_90566929_R | GTCTCGTGGGCTCGGACTGTTTGGAGTGAGTCCCT | 58.1 | 0.01 |
| mm4_intergenic_Tpk1|Gm22939_chr6_43850894_F | Primer3: not found at this Tm | N.d. | 0.01 |
| mm4_intergenic_Tpk1|Gm22939_chr6_43850894_R | Primer3: not found at this Tm | N.d. | 0.01 |
| mm4_intergenic_Nmur2|Gm12239_chr11_56052503_F | Primer3: not found at this Tm | N.d. | 0.01 |
| mm4_intergenic_Nmur2|Gm12239_chr11_56052503_R | Primer3: not found at this Tm | N.d. | 0.01 |
| mm4_intergenic_Gm10556|Svil_chr18_4853028_F | Primer3: not found at this Tm | N.d. | 0.01 |
| mm4_intergenic_Gm10556|Svil_chr18_4853028_R | Primer3: not found at this Tm | N.d. | 0.01 |
| mm4_intron_Tcn2_chr11_3930438_F | TCGTCGGCAGCGTCTCCCTGAGGACTGTCCAGAC | 60.2 | 0.01 |
| mm4_intron_Tcn2_chr11_3930438_R | GTCTCGTGGGCTCGGTGCCTAGACTCTCTGGCCAT | 60.0 | 0.01 |
| mm4_intron_Enpp4_chr17_44105556_F | Primer3: not found at this Tm | N.d. | 0.01 |
| mm4_intron_Enpp4_chr17_44105556_R | Primer3: not found at this Tm | N.d. | 0.01 |
| mm4_intergenic_Gm10051|Gm15627_chr5_134067829_F | Primer3: not found at this Tm | N.d. | 0.01 |
| mm4_intergenic_Gm10051|Gm15627_chr5_134067829_R | Primer3: not found at this Tm | N.d. | 0.01 |
| mm4_intergenic_Gm13557|Ccdc148_chr2_58975147_F | TCGTCGGCAGCGTCCTGACAGTCTGCTCAGTCCC | 59.7 | 0.01 |
| mm4_intergenic_Gm13557|Ccdc148_chr2_58975147_R | GTCTCGTGGGCTCGGGGTAGCCTTTGGTGGTTCCA | 59.8 | 0.01 |
| mm4_intergenic_Gm5909|Gypa_chr8_80353048_F | Primer3: not found at this Tm | N.d. | 0.01 |
| mm4_intergenic_Gm5909|Gypa_chr8_80353048_R | Primer3: not found at this Tm | N.d. | 0.01 |
| mm4_exon_4921518K17Rik_chr12_57588277_F | TCGTCGGCAGCGTCCGCATCAACTAACAATAATAACACC | 57.1 | 0.01 |
| mm4_exon_4921518K17Rik_chr12_57588277_R | GTCTCGTGGGCTCGGACACACTGAATAAAGAAGCCCA | 57.9 | 0.01 |
| mm4_intergenic_Gm22273|Gm24079_chr5_62386320_F | Primer3: not found at this Tm | N.d. | 0.00 |
| mm4_intergenic_Gm22273|Gm24079_chr5_62386320_R | Primer3: not found at this Tm | N.d. | 0.00 |
| mm3_intergenic_Gsg1|Pbp2_chr6_135273514_F | TCGTCGGCAGCGTCCGGTTCCCATCTCAGAAGCA | 59.7 | 0.00 |
| mm3_intergenic_Gsg1|Pbp2_chr6_135273514_R | GTCTCGTGGGCTCGGACAACAACTCTTGGGTCCCA | 59.0 | 0.00 |
| mm4_intron_Frmpd4_chrX_167857672_F | Primer3: not found at this Tm | N.d. | 0.00 |
| mm4_intron_Frmpd4_chrX_167857672_R | Primer3: not found at this Tm | N.d. | 0.00 |
| mm4_intron_Grip2_chr6_91802660_F | TCGTCGGCAGCGTCCACTCTCGATTCCTCGGAGC | 59.9 | 0.00 |
| mm4_intron_Grip2_chr6_91802660_R | GTCTCGTGGGCTCGGCTCAGAATGGCAGGTGAGGG | 60.1 | 0.00 |
| mm4_intergenic_Trdv2-2|Trdv4_chr14_54013324_F | TCGTCGGCAGCGTCACTGTGAGTCCTGCCTTCAG | 59.3 | 0.00 |
| mm4_intergenic_Trdv2-2|Trdv4_chr14_54013324_R | GTCTCGTGGGCTCGGAACCCAGGTCTGCACTTCAG | 59.8 | 0.00 |
| mm4_intron_Nav2_chr7_49271197_F | TCGTCGGCAGCGTCTCCTAACTGGGAACTTGGGG | 58.6 | 0.00 |
| mm4_intron_Nav2_chr7_49271197_R | GTCTCGTGGGCTCGGTGTCCCTCTGCCAACTTCAC | 59.8 | 0.00 |
| mm2_intron_Trp63_chr16_25832453_F | TCGTCGGCAGCGTCAACCGGTATCACCCCTTTGG | 59.6 | 0.00 |
| mm2_intron_Trp63_chr16_25832453_R | GTCTCGTGGGCTCGGTGAGACAGTCCACTTCCCCT | 59.8 | 0.00 |
| mm4_intron_Gal_chr19_3413378_F | Primer3: not found at this Tm | N.d. | 0.00 |
| mm4_intron_Gal_chr19_3413378_R | Primer3: not found at this Tm | N.d. | 0.00 |
These only list off-targets that have primers in the table above. Primers underlined, off-targets in bold.
| ontarget_mm0_exon_5730457N03Rik/Evx1_chr6_52313777 |
CCTTGTCGCCTTAGCTCCTCTTCTCAGCCAAGATCCCAGGGAGCCTGGGATTAGGAGCTTACTTGGGGGTTTTCCCCCTC CCCCCCTCTGGAGAGTCCGGGGATGGAGAGCCGAAAGGAC |
| mm3_intergenic_Evx2|Hoxd13_chr2_74665453 | TCAGCAGTCTGGCTCAACAGCAGTGACTTCCCTGGGATCCTGGGATTTGGAGTTCTACCTGTGGGCCCTTTCAG |
| mm4_intergenic_D7Ertd443e|Dock1_chr7_134500626 |
CAGAACTCCCAGCTGGTAGCAGACTTTATTCACACTATAACTCCCCAGGGATCTTGGGTTTAGAAGCCCTGGGATAAAGG CAGCCAGGGAAGAAA |
| mm4_intergenic_Eepd1|Gm25346_chr9_25555270 |
GCCCTGCTTTGGTGTTTTCTATGTGTGACAAGTATATATTCGTTTTACCAGGAAGCCTGGGGTTAGGAAAATTAAACTTA ATACAGTAGTCACTCTTCCAGCCAGAACCTAGTGC |
| mm4_intron_Spock1_chr13_57657907 |
CAGGTTCTGGGCAGCTGTAAGAGGTGACATTCAGAGCACACAAGTCAGAAGATTCTAGTCCAAACCCCAGGCTCCCAGGA ACTACCTACAAATTTACTGTCACACGGTAGATGTTCAGGG |
| mm4_intron_Stk39_chr2_68271228 |
TTGCGGCTTTACAGTGGGAACAGTTTCTAGACCCAGGCTCCCAGGCTGCGACTCTTATNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNCCCTCCTTACTCCTAAAATAAGAGC |
| mm4_intergenic_Mki67|Gm9341_chr7_135925609 |
GAGCCTGGCAAAGTCTAGCATTGGCTGTCCCTGCTTTCCTGGATGGGCACCTGGTGTTCCTGGAAGCCTGGTATTAGTAG AAACAACTTGTTTGAAAGTTTACATCCAAACCTCCTAGGAAGAGGGCT |
| mm4_intron_BC034090_chr1_155227569 |
TGCTGAAAAGCCTCTGAGGGAAGTCTCCATGGGTATTCTGTGGGCCTGGAAGTCTGGGACTTGGAGCATCCCTGACCTGA GGATCCC |
| mm4_intergenic_Gm13799|Gm13800_chr2_95918828 |
CCATCCTGGGAATCCTGAGCTGCCTGAGAGCCTGGAATTAGAAGACTAGAGGAAAATCTTTCTCATGAAATCTGTCCAAT GTTTTCAAGTCATTGACAGCGTGGTCTAGGGTGCTTTGCA |
| mm4_intergenic_Dscam|Bace2_chr16_97324620 |
GTGTCTGCCGTGGAGGTAAATTCCTAGGAACCATTCATCATCCTGTCCAGGTCCTGATTACAGGCTCCCTGGATGTGGCT CCTTCTTATTCGCTAAGCCCTGTCCAAG |
| mm4_intergenic_A730056A06Rik|A730056A06Rik/Rgma_chr7_73351896 |
CATGGTGGTTACCCTGGGACCCTGTTTCCACTGTGGTCCAGGGAGCCTGGAAATGGGAGTCCTTCAGGTTGGCCAACGGA GGATACA |
| mm4_intergenic_Gm23848|Trps1_chr15_50307686 |
GGGAAGTGTCTGCTGGAACATCTGTGAGATAATCAGCTACCATTCACCAGATATCTCCATGGCCTGGTGTCCTGGGATTT GGAGCTGGTCATTTCAAAACAATGCTGAGAGTGAGCTGTACCC |
| mm4_intergenic_Zswim6|Smim15_chr13_107971913 |
CTCCGTGCAGGGAAAAGGTAAAAGAACTGGANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNAACAAGAGACTCCAATTT CCAGGCTCCCAGGAGCCAAGGATCCAGGCTCTTGTGATGTGGGGCTGT |
| mm4_intron_Skor2_chr18_76886808 |
CGCTGTGTGGGCAGAACATACTCCATTTTGTTTATTACAGGTTCAGGGTCATGTTGTTGATGTTCTAAGGTTGGTTCAAT CCTCATCCCGGGAGTCTAGGATTTGGAGGGCCAGATGAGCACTAAACCTG |
| mm4_intron_Disp1_chr1_183209299 |
CACATCCGTGGTCACTCCAGTCTTAATGTCATCAACATTCTTCAGAGCATTTGCTCCACCTGAGCTTCAAAACCCAGGCT CTCGGGCCCAAAATAAATCATGGAGCCTGTTCACCTCAGAACAGGCCGTACAG |
| mm4_intron_Man1c1_chr4_134653471 |
TTCGGTGTCTCCTGTGAGTTACAACACAACCAGGGATCCTGGGTTTAGGGTCAGAGGACCACAGTGAAAGAATAGAACCC CCCAGTGCCAGGATTTAATGTGCCAGTACGGTATCGTTGGAGGACTAGCACAGCA |
| mm4_intergenic_Tmem17|Gm26829_chr11_22564309 |
GGGCCAGACAACAGCAAATCATCTAGCCGGAGGGCACAGCTCCTGCTTCCAGGATCCCAGGTGGTGCTCACAGCCACGGT ACCTCACTATTACTAAGATGAGGTCCTTTGCATCCTCG |
| mm3_exon_Gm6576_chr15_27025366 |
TGGATGACGCCTGTGCAGCGAGAGGGCCCGGAGGACCCGGGGGCCTAGGATTAGGAGGCCGCGGCGGCTTCCGCGGAGGA TTCGGCGGAATTCGGTCTTAG |
| mm4_intergenic_Tcf7l2|Gm22271_chr19_55985609 |
ACCTTGTGCTTGTCCCAGAGAGATTCCTGGGAGGGCTAGAACGATGCTGATGAACAGGCTGATGTAATCACTTCAAAAGC CCCACCTGGAAGTCTGGGCTTAGGAGGAGGCTGTGGGGACATTCCGAGCCAGGTCTTG |
| mm4_intergenic_Snx29|Cpped1_chr16_11794831 |
CCAACAATGGTGACCTAGGCATTCAAGCATGTGAATGTTCTCAAGAGCAGCCTGGAAGCCTTGGCTTGGGAGCTGGTGTA GCAATCATCCCTGCGGCTGCACTGCTAAGGTCTTTGAGCATCACCCAGCAACCACATGAA |
| mm4_intergenic_Gm16013|9230020A06Rik_chr11_71456962 |
CACAGAGTCCCCATGCTGAAACACAGCACTTCTGGGACATTTTAAAAGTCCTTGGAATCAAAACTGTTTTTCCTAAAGGG ATGCATCTCCAGGGAGCCTGGGACTCAGAGTGGGATGGCCAGTCCTTTCTC |
| mm4_exon_Gm15506_chr7_98693245 |
TACAGCACTGACGTGTGACCGCTTAACTGTGGCCGTTTCCTGGCCCAGGGAGCCTGGGCTTTGGGGAGCCTGGGAAAGAG ACAAGAAAGAGAGCTTTATATGAGGTAAGCCTCGACAGCAATAACGAAGGCC |
| mm4_intergenic_Zfp956|Zfp777_chr6_47977814 |
GAATCCTCTGCAGAAGCCGGCGATGGACTCCTAATCCTGGGCCCCCGGGTCCTCCGGACCCTCCCGCTGCATCGGTGTCA TTCGAC |
| mm4_intergenic_Kcnj1|Fli1_chr9_32417667 |
CCTCTCAGAAGTGGCCATCCTCCCAGGGAACCTGGGATTTGTAGTATTCTAATCAGCTGACCTCTTCTAATCCTCTAGAG GGTCTATGGCTAAAGGCGTGCAGT |
| mm3_intron_Arnt_chr3_95445973 |
CATCACCAAACTGCCCTCCTTGGTAGACGTACTTTATGGGGCGGTCTCACTGCAGCCCAGGTGGCCTGGGATTAGCAGCC ATCCTGAACGCTGCTTTTATAGACCAGAAGCTCTACACTTGGA |
| mm4_intergenic_Gm8707|Sorl1_chr9_41805998 |
CTTTCCACAGGCAGGCATTGTGAGGCCCCGGGTAGCCTGGGATTATTATCTGACTGAAACTAAATTGCTCTGGTTAGACA TCTGTTATTCTGTCGAAAATATTGCCAAATGACTGCACCAAAATCAGGC |
| mm4_intergenic_Zbtb38/E030011O05Rik|Acpl2_chr9_96814273 |
CTAAGACCGCTGCCGAATCCTCCGCGGTAGCCGGAAGCAGCCGTGGCCTCCTAATCCTGGGCCCCCCGGGTCCTCCAGGC CCTCCCGCTGCACCGGCGTCATCCGCCATTTGGTGTTTTCCC |
| mm4_intergenic_Snx19|Adamts15_chr9_30512978 |
CAATGACACCAGTGCAGCTGGAGGGCCTGGAGGACCAGGGGGCCCAGGATTAGGAGGGAACTCCTTTAGTGGCAGATTTG GCAGCA |
| mm4_intergenic_Rps2-ps6|Tsc22d1_chr14_76237483 |
CTAAGACCGCTGCCGAATCCTCCGCGGAAGCCGCCGCGGCCTCCTAATCCTGGGCCCCCGGGTCCTCCGGGCCCTCCCGC TGCACCGGCGTCATCCGCCATTTGGTGTTTTCCC |
| mm4_intergenic_Rhobtb3|Gm6311_chr13_75954174 |
GGGAAAACACCAAATGGCGGATGACGCCGGTGCAGCGGGAGGGCCCGGAGGACCCGGGGGCCCAGGATTAGGAGGCCGCG GCGGCTTCCGCACAGGATTCGGCAGCGGTCTTAG |
| mm4_intergenic_Gm6139|Zfp11_chr5_129623809 |
CTAAGACCGCTGCCGAATCCTCCGCGGAAGCCGCCGCGGCCTCCTAATCCTGGGCCCCCGGGTCCTCCGGGCCCTCCCGT TGCACCGGCGTCATCCGCCATTTGGTGTTTTCCC |
| mm4_intergenic_Gm26901|Sntg1_chr1_7664125 |
AGATGACGCCGGTGTAATGGGTGTAATGGGAGGGCCCGAAGGACCCGGGGGCCCAGGATTAGGAGGCAGCAGCGGCTTCC GTGGAGGATTCTGCAGCGGTCTT |
| mm4_intergenic_Gm14263|Gm14266_chr2_170954856 |
TCAGCTTTACCTCCACGAGCCCCGCGGCCTCGGCTACGACCTAAGACCGCTGCCGAATCCTCCGCGGAAGCGGCCTCCTA ATCCTGGGCCCCCGGGTCCTCTGGGCCCTCCTGCTACATCGGCTTC |
| mm4_intergenic_Cbs|U2af1_chr17_31644717 |
CTAAGACCGCTGCCGAATCCTCCGCGGAAGCCGCCGCAGCCTCCTAATCCTGGGCCCCCCGGTCCTCCGGGCCCTCCCGC TGCACCGGCGTCATCCGCCATTTGGTGTTTTCCC |
| mm4_exon_Rps2-ps9_chr17_27784462 |
CAAATGGCGGGTGATGCTGGTGCAGCGAGAGGGCCTGGAGGACCTGGGGGCCCAGGATTAGGAGGCCAAGGCTGTGTCCT TGGTCAAGGCCTCGGGGCTCGTGGAAGTAAAGCT |
| mm4_exon_RP24-225O12.5_chr14_69158686 |
AAATGGCGATGACACCGGTGCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCGGAGG ACCCGGGGGGCCCAGGATTAGGAGGCCGCAGTGGCTTCCGCGGAGGAGGAGGTCTTAGGG |
| mm4_exon_Gm6433_chr5_141268393 |
CTAAGACCGCTGCCGAATCCTCCACGGAAGCCGCCGCGGCCTCCTAATCCTGGGCCCCCGGGTCCTCCGGGCCCTCCCGC TGCACCGGCGTCATCCGCCATTTGGTGTTTTCCC |
| mm4_exon_Gm5921_chr9_115438519 |
CTAAGACCGCTGCCGAATCCTCCGCGGAAGCCGCCGCGGCCTCCTAATCCTGGGCCCCCGGGTCCTCCAGGCCCTCCGGC TGCACCGGCGTCATCTGCCATTTGGTG |
| mm4_exon_Gm5786_chr12_59081057 |
GGGAAAACACCAAATGGCGGATGACGCCGGTGCAGCGGGAGGGCCCGGAGGACCCGGGGGCCCAGGATTAGGAGGCCGCG GCGGCTTCCGTGGAGGATTCGGCAGCGGTCTTAG |
| mm4_exon_Gm11249_chr4_67930919 |
CACCAAATGGCAGATGACGCCGGTGCAGCAGGAGGGCCCGGAGGACCCGGGGGCCCAGGATTAGGAGGCCGCGGCGGCTT CCTCGGAGGATTCGGCAGCGGTCTTAG |
| mm4_exon_Gm10653_chr9_62842285 |
CACTGCTGAATCCTCCGAGGAAGCCATCGCGGCCTCCTAATCCTGGGCCCCCGGGTCCTCCCGGCCCTCCCGATGCACCG GCGTCATCCGCCATTTGGTGTTTTCC |
| mm4_exon_Gm10420_chr6_122696039 |
GGGAAAACACCAAATGGCGGATGACGCCGGTGCAGCGGGAGGGCCCGGAGGACCCGGGGGCCCAGGATTAGGAGGCCGTG GTGGCTTCCGCGGAGGATTCGGCAGCGGTATTAGGG |
| mm4_intron_Zfp410_chr12_84326488 |
TGTGCAGTTCATCACAGCCAGGGAACGTGAAACATGTGTTGTACATTCTTTGATTTCAGGTAAGTTTGAAACATAAGTAG AAAGAAGGTAAACCTGGGAGCCTGGGAAGGGGAGACTTCAGCAGGAAGCAGAACAGCAA |
| mm4_intergenic_Gm15663|Mettl25_chr10_105667540 | TTGGAACCCTCATCACCACCCCTGGAAGCCTGGGATTAGCATGGGCTGCCTGCGATCACCAGGCAAAAC |
| mm4_exon_Cntrob_chr11_69303255 |
GAGACTTGACGCCATGGCTAAGGGAACTTTGGTTTTGTGGACAGGAGGTGGAAGTCGGGGCACTTGAGGGGCCTCCTCCC AAGACGAGACAGCCCGAGAGCCTGGCATTAGGAAAGAGGTGCAACCATGAACACAGGGT |
| mm4_intron_0610012H03Rik_chr2_105227450 |
CCCACGCTATAGCCAGGATGCCTCCCACCAGCAGCCCAGGCCCGGGAGGCTGGGTTTAGGTGTCAAGGCTGGAACCTGCC TATTTCCTTCCTGTAGCTGTTCTAGGCTCCAGTCG |
| mm3_intron_Ap3d1_chr10_80718753 |
AATGGAGGTGCTGTAGCCACCGCAGCCTACCACCTAGTCAGCCCGGGAGCCTGGCGTGAGGAGCTCACTATCAGCACTGT ATGCTGAGTCACCTGAAGCAGACGTGA |
| mm4_intron_Alx3_chr3_107600293 |
CCCCATCACCACATCTTCCCAGACCACAGAGCATGTGGCTCCCTAGGGCCCCCTCCCCAGCTGGAGGCTCAGCAGTCAGG CCTCTAAATGCCAGGCTCCCAGGGAGGGTGGCTGCCAGGAGGAAGGGAAGGGGAAG |
| mm3_intron_Synpo_chr18_60651797 |
TTTGGATGGGAACTGGCTGGGTAACCTCCTCTTCAAAACGTCCCCGAGGAGCCTTGGATTAGGAGGGCAGAAGTGGGGGT CAGGAAGTGGAGGCTGTG |
| mm4_intron_Ttll10_chr4_156044457 |
CAAACACTCCCTGGCTACCCCTCCCTGGAGCCTGTGTTTAGGGGCAGTCTTGCTTGTTACCCCAGCTAAATGTGAACACA CACACCCCCGCCCCTGAACAGGTTATGGGTCTAGATGTGGGCTGCTC |
| mm4_intergenic_Wdr20a|Stk30_chr12_110803465 |
ACTTCTCCAGGTGGGACTGTAGTGTAGCAGGTGCACTGCTGCTCCCAGGCTCCCCGGACACGCGTGGACCGAGGGAGTGA CAGACGACAACGGA |
| mm4_intron_Tcof1_chr18_60840046 |
ATGTGGTCGTCAATTGTGCCGACCCAGGAGCCTGGGACTAGTAGGAGACACTGAGATTCAGACTCTCGAGGGTTTTAAGA AACGGTGCTTTGGATCTCAGG |
| mm4_intergenic_Tulp1|Fkbp5_chr17_28368629 |
TGTCACGGATCAGGAAACGGGGAGGGTGTGGATGGCAGACCCGGAATGGCACTTAACCTCAGGCTCCCTGGCTCCCCCTA GCGGCGAAGAGGCGAGGGACCCGGGAGCGACCCCGGAGAAAGCTTCAGGCAGGA |
| mm4_intergenic_Atp13a3|Tmem44_chr16_30507312 |
AGTCACAGGGCCTGTTGTTTTCTCGGGGCCAGGAAACCTGGGATCTGGAGCCCGTCCTGGCCATCAGTATTGCTTTGCTT GGCACCCAGCCACACCTGAAAAGCGGCTAAAAAGTGGCCTCTGGTCACCTA |
| mm4_exon_Gpr98_chr13_81557298 |
ACCTGTGAATCTGGCACCACCATCCATCCCTGCTCCAATTCTCAGGATCCCAGGACCTAAAATCAGACATGCATTTAGAT GCTATGACAGCCACTAACTATCTTCTATCACAACCTAGAAGTGGGTTTCT |
| mm4_intergenic_Gm7936|Gm24396_chr18_30721170 | ACAGAGTAAATGGACATCATTGCTACCTAGGAGCTTGGGATTAGCAGAGAAAGCTCTGGGGAATGGGT |
| mm4_intron_Synrg_chr11_84029678 |
GGCAGTAGGACCCATTTCCCTTCATCTTCTCCAACTCCCAGGCTCCTGGGTCCTGCCACTGTTCATGCAAAGAACTTGCC TTCTAGGCTCTGCTCTGTCACTCCAG |
| mm4_intron_Nos1_chr5_117885366 |
TACCAAGGGACCACTTTGGCCTCTGGGGAGCTCCAAATTACAAGGCAGGAGGGGTCAGGCTCCTGAGCCCATACTCCCTG GTATGCAGGCAAGCCGAAGTCTCTGAGAACTGGGGTGTGCTCTC |
| mm4_intergenic_Epha8|Zbtb40_chr4_136969984 |
GGGAGGATAGTGATGGGGCTGGGGCTGGGGGTTGGCAGAGGTCAGGTGGGGGGCGCTGACTGGCTCATTCAGCTGCCAGG ACCTTATCCCAGGCTCCATGGGGGGTCCGCATGAGGCCTCTGGTTTGGT |
| mm4_intergenic_AC152827.1|1700001K19Rik_chr12_110674864 |
TCAAGAGAGGAGGCGCTCTACTCCCGAAGGTGTCTCCTTAGGATGGAGGCCTTGGAGCCTGTGCATAGGAGCCTCTGGGC ATTCCGTGCATGTGAACTGTCTGGCT |
| mm4_intergenic_Gm17028|Lrriq1_chr10_103039967 |
CCATGTAAGATAAGTGCCTCCCAATGTTTGGAAATACTGTTAGGAAACTTTAGCTTTTTCCCAGGCATCCTGGGTTTAGA AGCAGCACAGATTGCTTGAAAGACTCAAGGAAATCATATGTGGGGTAGAGTTCTTCACT |
| mm3_intron_Sulf2_chr2_166109062 |
GATGCCTGGATCTGAGAGCCACGAGGAGAGAGAGGCAGAGCCTGGGGAGCCTGGGATATGGAGAGCTGAGGAGGCTGGAA CAGAAGTCC |
| mm4_intron_Col13a1_chr10_61876824 |
GGTCTGCTAACATGGCACCTAGTGGCTTGGGCCAGACATGAGCTGCTTCTCTCTACTTTTATCCAGGGGCCTGTTATTCC CAGGCTCCCTGGGCGGTGAGCTGTGCATTTTTCTTTCTGATCCTGCCTGGC |
| mm4_intergenic_n-R5s198|Gm13652_chr2_74974613 |
TTTCTGCGAGGTAGCTGAGCCCCCAAACCTCTACAAATTCGAGTCAACAACAACAACAAAAATCCCTCGAGGAGCTCGGA ACCTCAGGCTCCCAGGTGGATTGCGGAAAGTGCAAATGTGG |
| mm4_intron_Fam178b_chr1_36595721 |
CTCCTCTGAAGGCCACAGTGCAGCAGCATGCTAGGATGTTTAATAAACAGTCACAGATGGTGAAGGAGGCAGGTCCTTGG AGCCTGGGAACAAGAGCACTCAGTGAAGCAAGCACAGCCCATA |
| mm4_intergenic_Usp3|Car12_chr9_66694851 |
GGGCCAGACTCTTTTGGGATCGAGGACAATGACTGATGCCTTGCTAAGGAATGAACTACCGTTTGCTTTCCCAACATAGA GCTCCAGAGAGCCTTTCATTAGGAGCTGACTCCAATGTAGTCCAGGGAGACTGAGTGT |
| mm4_intron_Has2os_chr15_56692955 |
TATCCCGTGTCTGGCTCTCTTCCCACCTCTTCCCAGGCTCCCAGGGCCCCTCGACCCCACATCGGACAAGGGGCTAGAGA CAGAGTCCCCTAATCCCCCACACAACAGCGTCTCCAGCTGCAACGGAGGAAAGAA |
| mm3_intergenic_Tox2|Jph2_chr2_163325455 |
ACCTTCCTTCAGAAAGCATCCTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCAAG GTAATAATTGTCACAAGTTGAAGTCTATGGTGAGGAAGGGCAGAAG |
| mm3_intron_Mapkap1_chr2_34469881 |
CCATGCTAGGCTACTCGCTCTTCCTGGTACCACTCTTTACAGTTTTCTAGGAGAACAAGGGGTCTCATTCTATTCATTTT ATGGCTAAAACTTGGGAGCCTGGGCCTAGAAGCACTGGTTCCCTTTCCTGTGTAGAAACT |
| mm4_intron_Igf2bp2_chr16_22067857 |
TTTGCGTTCCCACAGTCTGTAAGTCCTTGAAGCCTGGGCTAAGGAGCATCAACATGCTGAGTGCTAGGCATAGATGCTCA TTCTGCTCATGTGGGCCTTC |
| mm4_intergenic_Grap2|Fam83f_chr15_80666873 |
GAGGTTTCTATTGCTTGTCCCCCTCTATCTACTCTCCTCTTCCCAGGCTCTCTGGCACTCTAAAAGTCTTGGAGCATCAC T |
| mm2_intergenic_Nmd3|Sptssb_chr3_69761547 |
GTGCAGGCATGTACCTCTCATTAATAATCAGGAGCCCTGCCTCCCCTGGTGCCTCTCCAGAATATGCACCTTTCTGAGTT CTTGTGTTTCACACTGGGGAGCCTGGGATTCTGAGCGTCTCGAAGGTGCATGGTGC |
| mm4_intergenic_S100a7a|S100a8_chr3_90668265 |
ACTTGACCCCTCACCATCCTAGAGTTCACTCCTCTCTTCATCCCAGGCTCCTGGGGACAAAGGTACAGTGACCATTCTGA GAGGCTGAAAGGGTCTCTACTGTTATCATGCAGTGACTTAGTGGCAGCTGAGGG |
| mm4_intron_Unc5b_chr10_60803232 |
TTTACCCTTGGGCTGAAGGCACGGGCTGCTTGAATCCAGGGAGGCTGGGATCAGGGGACAGGAACTAGGATGGGACTCCA GGAACCACT |
| mm4_intron_Plxnc1_chr10_94806642 |
ACCTTTTCTGTCGGGAGCAGAGAACTCTTACTACCAGATTATGTCTGAGATCAGGCCCAGCTCTCCATCCAGGAAGCCTG AGATCCGGAGCATGGGCTACAACCCCCACTCAGAAACAGCTTTGCTCTGCTGGCCTTA |
| mm4_intron_4833422M21Rik_chr15_96248391 |
ACCTCTACGAGCCTCAACCATGATAACCACATCACCTAAGACCAAAGGAAGCCACAGCAGCCTCCTAATCCTGGGCTCCT GGGTCCTCCGGGCCCTCCTGCTGCCCCGTGTCATCTGCCGTTTGTT |
| mm4_intergenic_Id2|Gm22527_chr12_25113822 | ACATTCCTCCTGATGCTCCTCCTGAGAGCCTGGGAGATGGAGCAGGGAAATATCTGGGCTTGGAGAAAACCTCA |
| mm4_intron_Ces1e_chr8_93203169 |
ACAGAAGCCTTGGAACGCAAAGCTCCAAATCGCAAGCTCACAGGCAGCAAAGCACCATTACCTCTTAAAATTGGGGCCCC AAAGACAGAGTAG |
| mm4_intron_Itpr3_chr17_27082610 |
GCATTCCTCCAGTCAACGGATTCATCTGTCAAAGAATCCCAGGAGCCTGGCATCAGTAGCAGTTGGTGAATATAGGAAGG ATGACTTAGGGAAAGAATACATAACTTGGATCATGCCTTTGGGATGT |
| mm4_intergenic_Mir200a|Mir200b_chr4_156055630 |
AACTCTTTGCCCCATAGCCCTACCTTGGATAAGGTAGGTGAGGTGTGGAACTGGGGCCCCTGGAGGCTGGGATCAGGAGG CGGCTCCATTGCTGCATGCAGGGCTCCGCCGTCATCATTACCA |
| mm4_intron_Sntg2_chr12_30349602 |
CCAGTGCTGAGTGAGAGGTGAAATGGTCAGCCCTGTGCCTGGGAGCCTGGGATGCAGGGCCAACAACAGGGAACATCGAG AAGAGG |
| mm4_intron_Syne1_chr10_5028486 |
AGGCAAACATCCCCTCTGTGCCCATTGACAGGGCTGAGTGCCCCTGATCCAAGGTTCCCTGGAGTTGAGGAGCTCGTTTG CCAAGGTGTTT |
| mm4_exon_Lrch4/Gm20605_chr5_137638659 |
GCCTGAAGGAAGAATGGGCTACTGAGGGGTGTCTCTGTTGCCTATCCCTGGCTCTCCCCCCAGTGACAGCTCCTGTTCCC AGGCCCCTGGGCTCCATTCAGAGACCAAACAGCTTCCTCTTCCGGTC |
| mm4_intron_Rbfox1_chr16_7033968 |
GTCCTTTGAGAGAAGCCTCCCTTATATCTGCTGCTGTGCTCCATATCCCAGGTTACCTGGTCCATGAGCTTCGTAGCTCT GCTCCTAAAGATTTGTTGTGTTCACTTCCTGTCTCT |
| mm4_intergenic_Gm26831|Gm8321_chr1_119119769 |
TTTGCTCCAGGCCGATAAGGCAGAAGCGCCCTGGCTCCTGCTCCGAGGCTCTCTGGTGCACCCCAGGCAGCAGGCAATCT GCACCAGCTGTG |
| mm2_exon_Cerk/Gm15569_chr15_86185882 |
GAAGCTAGACTTGGGGCCAGAGAAGAATCAGAAACAGAGGAGTCTAGGGAGCCTAGGATGAGGAGCAGAAAAGGCCTAGG AAGGAACGGGAGGGA |
| mm3_intergenic_Ccr3|Ccr2_chr9_124051335 |
AGAGGGGAGTTCAGCTCGTAAATTGGAACCCAGGCAGCCTGGGATTAAGAGGGAAATTTCTTTCTCCTCATTCACTTCCT CTTTTTCCTCTCTCTTCCGTCCTCTCTCCTGCCTCTCCAT |
| mm4_intergenic_Gm26676|Kcng2_chr18_80340268 |
ATCCCACCCATCCACAGAGAGAGACACACCCTGCTTCTCTTCCCTTCTCAACATAGAAACAGGGTCTCCACCCACCACTG TTACAATGGCTTCTCATGCCAGGCTCACAGGCCTCATGGGCTGTGCAACTA |
| mm3_intergenic_Gm27030|Gm23299_chr8_121665433 |
AGAGCCTAGACTCCAGGAGCCAGCTGCTAGCCACAGAGCCCACAGCCCACAATCCCAGGCTCCCGAGAACCACACTGACT TCCGCCTCCTC |
| mm4_intergenic_Gm5239|Snhg4_chr18_35540253 |
CTGCTGCTCATCCGAGGAAACAGGCTGAGGCTGCAAAAAGGCCTGGGAGCCTGGGAGGAGGGGGAGGCTGGCTGGGCGGC TGGCTGTGGGTCTCAAGAG |
| mm4_intron_Ctsz_chr2_174436153 |
GTGTGGTACAGCGAGGGACTCGCTCCACCCCATCGTTAGGATGTTAGGAAGCCTGGTAGCCTGGCCTGAGGAGCTAAAAA ACTCGACGTGAGGCAATGCGGAAGTGAG |
| mm4_intron_Scn2b_chr9_45118779 |
AGAGTAGCTGCTACCGAGGCAGGCACCCCTGGTGTGAACCAGATGGAATGGATGAGGTCAGGTGCCCAGGATCCTGGGAA AAGGAGCAAACTGTAAGTGGAACCTAGGGAGAGTTCCTTTAAAACCAGTCTCCGTGGTCC |
| mm4_intergenic_Wdr11|Gm23847_chr7_129639318 |
CAGGCAAAGGAGAGTGAGCACAGGTGAGTGCATCCTGCCTGCCTCCTAACCTCAGCCTCCCAGGTGAAGCCTGTCCTTGT GTCACCTGACTCACACAGCA |
| mm4_intergenic_Sp7|Gm23590_chr15_102370867 |
GGACCTACCTCCACTCTCACAGGCCTCCTCAGCCCAGCCTCCCAGGGGGTGGGGCAGCCCAGGCAGAGGCGCCATGTGGC AGGGGCGGGTAGAGGCTGCGGCTCTGGCCCTTCCAGTATAAACCCC |
| mm4_intron_1700113H08Rik_chr10_87094048 |
ACTCAGCGAACAACAGCAGATTAGGGAGTCTCAATTTGTCCTGCCACAGTCTCAGGACAAGGGAGGACCAGAGAGCCAGG TATGAGGAGCAGGAGGACTGAAGGGTGAGGGGCTGGCCAGGTGGGAAAGTACACA |
| mm4_intergenic_8430427H17Rik|Commd7_chr2_153555800 |
CGAGCTGGAGGTCCTTACTGAGGAAGACCCTTAGAAGCAGGCAACCTGGGAGCCAGGGCTGAAGAGCAGGGAGCTACTGT ACAGGAGCGGGGGGAGGCTGCAGCAGGAGCAACATTAGGTACAGGGATTCGAGGTGGACT |
| mm4_intergenic_Gli3|Inhba_chr13_15815124 |
TGTAGGCATCATGACAGGCCGAGAAGGACCCGGGAGACTGGGGTTTGGGGCAGGGGGAGGTGGGATCATGGCCCCTGCAG GCAGAGGAGCAGAGAAC |
| mm3_intron_Ywhag_chr5_135923253 | GTGGGAGGGAAACAAGGAGCCCCGGAAGACTGGGATTAGCAGCTCAGGCCACTACACCCTGCTGCCTACTGAAA |
| mm4_intron_Frmd5_chr2_121549601 |
GGGATGCAGGGCACATAAGTAAGTCTGCAGCCTGCACCTGCCTTGGGACTCAGGCACCCAAGGAACTTGGGATTAAGAGC CGTTGCCCCAGAACTCTGGATGCTTTGGCTTCTCTGTATTTCCTGATGCGGCCG |
| mm4_intron_Itpkc_chr7_27223246 |
AAAGGAAGGGCAGGCAATGGTGCACACCTGTGAGCCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNACATACATACAGACAAACAAACCCAAACAGGAGGGAGG |
| mm4_intron_Alg8_chr7_97385091 |
TGGCCTTGAGCAGGTTACTCCCTCTTTGCACTTGGACTTAAAGTAAGGACACCAAGCCCTGGGAACATGGGACTAGGTGC TCACTACAGTGTAGTTTTTACAGTTTCTGTTATGTACTTACAGGGA |
| mm4_exon_Lmtk3_chr7_45794485 |
GCCGAGGAGGAAGGGGTCCCTCGGCCACGGGCTCCCCCCGAGCCACCCGACCCAGGAGCGCCCCGGCCACCCCCAGACCC GGGTCCCCTCCCACTCCCAGGGTCCCAGGAGAAGCCAACCTTTGTAGTTCAGGT |
| mm4_intergenic_Gm5432|Lpin1_chr12_16088806 |
TGGCATTCACACCACTGTCAGATTAGCTTGCCATTCTTGTCATTGCTCTGTGACCTGGAAACCAGGGATTAGGTGCTCAC AACTTGATAGATACAAGCTTTATTGGCTCTTCACAGGCAAGA |
| mm4_intergenic_Gm25199|Syt6_chr3_103469355 |
GGGCTTGTGAGGACTTGCATCTCCAGGTACCCTGGGACTAGGACCACAGCCCTAGTGTGTGGCATGAGAGTGTCAGGGAG |
| mm4_intron_Gm13026_chr4_140452723 |
ATCCTGGCCGTGTAAACAGGGCTAATAAGAACCTGGCAGCCTTGGATGAGGAGAAAAGGAGGTGGAGTTCAACGGCCTTT AGCCAGCTGCTCCGGAGGCCAGAGTGGACTCACCAAAGTCAAAGGCACGCATCGTA |
| mm4_intergenic_Gm25722|Gm10051_chr5_132804882 |
ATTATCTGGGAGCCCTGGGGTCATTAGCCCCGGGGAACCTGAGAATAGGAGATCTCCTTTTCCTCTCTTTTCCTTTCCTT TGTGCTAAGATCCCCAGACCACAAGCATTGGGGTGTGTCA |
| mm3_exon_Cdk5rap2_chr4_70220879 |
GAACTCCCAGAGGTTCAGCCCTGCAGGGCCTACTCCCAGGCTCCCCAGGTTTAGTGACCAGAGGTTCCAAAACCCCTCCC ACCCATGCCAATGAGCAATGTACTACGCATGTGCCAGGTAAGG |
| mm4_intergenic_Ric8b|Fhl4_chr10_85038417 |
GAGGCCTGGGAAAGTACTGGGGAAACCCCTGGCCGGCGGGCTGCAGAGGGAGGCAGTCTCTCCTAAGCCCAGGCTGTCTG GATTTTTCTTTTGGTTGTTCTTCTCACTCCCACACGTGAGTGTAGCACGCAGACA |
| mm4_intergenic_Pgrmc2|Gm25487_chr3_41430580 |
AAACCTGGAAGCAGTGTCCCTGCTCTGAGAGCATTCCAGGGGCTCCAGGCACCCAACAAGCTCCGGGGAGCAGGGGTTTA GGAGGGAGGCGCTCATCCTGGTGTGTTGGACATGTGTGGC |
| mm4_intergenic_Tm9sf4|Tspyl3_chr2_153219093 |
GTTCACAGCCGTCTCTCCTGGAGTGGGTGGGAAGGGGTCTTCATTGCTCCAGTTCCCAGGCTGCCTGGAGAGTTCCTATC CCTGAAGAGATTTAAGCCCTGAAGTGCTTTCAGTGACTCCATGTCTTTGTCTACAGCCC |
| mm4_intergenic_Rmi2|Gm21859_chr16_10910731 |
TTTTCCATGACGGCAATGGCGCTGAGGGCTCAAGGCCCCTTAGCCCAGGCTCCTGGGGCTCCTCCCTTGCGGCTTGCAGC AGAGCCAGGAACTGACAGCAT |
| mm4_intergenic_Sh3tc1|Ablim2_chr5_35756060 |
ATCAGCGCTGCCTTGGTTATCAACCTCCTGGGTGACCGGGATTAGGACCTACGGGTCTTCATACTGCCCTTGTAAGAGAA TGTTCTGGGTCATTCAGCCC |
| mm2_intergenic_1700123L14Rik|Gm22971_chr6_96438087 |
GCTGTGCAAAGCTCACTGAAATAAATAGGCTAAAGTGGCCAGAAGTAGGGAGCAGGCTGAGGAGCCTGGGAATAGGAGCC AACACAAATGCAAAGAAAAGCTGAGGGGAGTCAAACCCAGA |
| mm3_intron_Gm16386_chr17_22805339 |
TTGAAGGGTCTCACAGGTGCCCTCCTGATACCAGGCTCCCTGATGCTGCTCCAAAAAGTTAACAGCCCACATATTCACCC T |
| mm4_intron_Cacna2d3_chr14_29488735 |
GGAGAGGGACAATGGCCAAATTCACGATGGCACAGACACCCCAGGGGCCTGAGATAAGGAGCTATTGGTTAAAGAAGTGG AAGGTGAGAAGCCAAGGCCACCTTCCTTGGGCCTGGGAGCTGCACCATCATTGCTAGC |
| mm4_intergenic_Kcnh8|Efhb_chr17_53243723 |
ATGAGGTTCTGCACAACACTAGTGTCCTAATCCCAGGCTGCTTGGTTGAGAGGACTCATTTGCTCTCAGCTGCTGTGTGG TTTAGAAGCAGGGCTTGCG |
| mm4_intergenic_Fgf10|Nnt_chr13_119176811 |
AGGGCATTGTTGTCAGAGGTGGACTACATCACAAACTAATCCCCTTGGCTCCTACTCTCAACCTCCCTGGGCATCGGCCG AGGATCCTCACCTGGCTGTTC |
| mm4_intergenic_Gm13029|Igsf21_chr4_140151172 |
CAGGAAGAGGCAAGGGACAGCCAGGGCAAGCAGCATCCTCGCTGGGCTCCAAATCTCAGGGTTCCAGGACTGGTTCAGGC TCATTCTTTGGGACATGCACTGTGGT |
| mm3_intron_Mvd_chr8_122443067 |
CAGTGACCCTCATCTCCAGCCCTGTGCACATCGATCCCGGCACCTGTGCCCCGGTCTCCAACTCCCAGGCTCCCCGATCC TGGTTGTAGTAACCCCCATTTCCACCACTGTGCCCAT |
| mm3_intergenic_Gm23514|5730522E02Rik_chr11_25688978 |
CAAGTGTTGCTGGGCTAGGATGGAAAGTGGTATAGGGGATCTAGAGGAAAGGCACTCAACACAGGGTATAGTTCCTTATA CCAGGCTCCCTGACAACAGGTGTCTGAATAAGGAGAGGCCAAGGACAGA |
| mm4_intergenic_Rab11fip4|Gm23293_chr11_79593923 |
ACATTTTACCAACTGCCCTGGTATACCACGGAGCCTGGGATCAGATGCAGTAGGTCTTAGAGACTGAAATAGCCTTGAGA GTCTAAGGAGTTGATGAATTAGTAATGCAAAAATCCCCCATACAGGAGAAACCCA |
| mm4_intergenic_2610528J11Rik|Tmem125_chr4_118537782 |
CCCCTAAATGGCTACGGTCCTTCACTTCCCTCTCTCTGAGCTCCTCTTCCCAGCCTCTCAGGGGAAGCTGAGAGAGCATT TCTGGGAAGTTTAGTTCACCATTCTGTCGTTTCCTCCTCAGGC |
| mm4_intergenic_Gm22539|1700080O16Rik_chrX_51886203 |
AGCTCTATCCTTTGCTCGGCACTGTTGGGTCTGGGGGCCTGGGAAAGTGGGATTAGGAGAATCTCCCCAACCCCCTTCAT TTAGATCCTCTAATTCCCTGTAATTGTATTTATAGTGCTGAGCGCTGATTGGTGGAAA |
| mm4_exon_2310045N01Rik_chr8_70147067 |
AGGCACTGGAGTCTCACTCTGGCCTTCTGCCCCTAACCCCTGTCTCCCAGGCCTGGATACCACATTGAAGACTCACCAAG AACTGAAGACCTAGCAAGTGGCCAGTGCCTGCTGCCTACTGATTCTGCC |
| mm4_intron_Rev1_chr1_38102181 |
TGCTCCCTCAACAACAAGCTCCACCAGTTGTGTAAACTTGGGCTTTTACAGCAATAATCCTCAACAGTCTACCTGGCAAC CTAGGATTAGGTGCCAATTTCCTTACGCCATTAAACAATGT |
| mm4_intergenic_Samd4|Gm10371_chr14_47097517 |
TGCCCGTAAAACACACCAGTAAGAAAACCACAGCCCAGAGTGCTGCTGCCCCTCAGCCCAGGCTGCCTGGGGAGCCTGCT GCCTCCCACTGCCTCTGAGAGTCAGCAAGGGAAACTGACCTTCCCCTGCA |
| mm4_intron_Fam19a5_chr15_87728715 |
TTCCTGAGCTCTGACCCTGAGCCAGGCTATCCCTTAGTCCCAGGCTCCCTGAGTTGGTCCTCATTGTTAGATATACATAT CTGACCCCCTGTCCTTAGCCAGTTCTGCG |
| mm4_intergenic_Prdm16|B230104I21Rik_chr4_154346758 |
TGGGGAATGCTAGAGAGGGTCTTAAATGAGATATGTCACAGTGGTAAAACAGCTGCTGGGGGTGGGGGGGCGCTCCTCTT GGCGGCACTAGCAACTCCTAATCCCCTCCTCCCTGGGGACTCTACCTCTTCTGTCCCCGG |
| mm4_intron_Meis2_chr2_115914349 |
CCCTGGAGACAAGGCAGTATTGATACATTCTAATCTATTTTGTATCATTTTAATAGCTTCTAATTTCAGGCTCCGTGGAA GCACTGCACAGGCAAAGCTCTCTAG |
| mm4_intergenic_Ccdc114|Abcc6_chr7_45972754 | GGGTGTGTGCTGATGACTCTGCATGCCAGGCAACCTGGGAGCAGGAGCCCAAACAGGATCAGGTCTGTCCCCA |
| mm4_intron_Ggh_chr4_20062973 |
GAGCTCTGTGTCTGGAGCTGCTGGCTGGTAGGCGCTGCTTCCTGTGGACGCCAAGAAGACTGGGATGAGGAGCTGGCTTT CTGGCAAGCTGCTGTTACAGTGGAACAGCTAGTGAGTGGGGTGTG |
| mm4_intergenic_Gm23892|Gm25382_chr10_16441819 | TTGGAGCACCACCCAATTGTGGTTTTCTTCAATGCAACTAGTGCCAGGCTCCCAGATGGCAGTCAAGAAGGCAGGGCAT |
| mm4_intron_Aldh1l1_chr6_90566929 |
ATTGCCTCTGTCCCGAGTTGGCACTTTCTGATGTCTTTGGTCCCTTCTTCCTTTGTACCTGGGCCCCTGGGATTTGGATC AACTGAATCTGGCTTTTCTAGGGACTCACTCCAAACAGT |
| mm4_intron_Tcn2_chr11_3930438 | TCCCTGAGGACTGTCCAGACAGCAACCAGGGACCCAAGGATAAGGAGCTTTAACAGGACATGGCCAGAGAGTCTAGGCA |
| mm4_intergenic_Gm13557|Ccdc148_chr2_58975147 |
CTGACAGTCTGCTCAGTCCCAAACTTCAGCTGACATGTACAGATGACACTCTGGTGCCTGGCTGACTGGGATTAGGAGAC AGCACAGGCATAGACTCCTGGAGGAGATGGAACCACCAAAGGCTACC |
| mm4_exon_4921518K17Rik_chr12_57588277 |
CGCATCAACTAACAATAATAACACCTCTTCCTTATTAACAAAAATCCATTCATCTGTTTCATTTGGCTGCTAATCCCAGT ATGCCTGGTGCTCCATTTACAGAATGGGCTTCTTTATTCAGTGTGT |
| mm3_intergenic_Gsg1|Pbp2_chr6_135273514 |
CGGTTCCCATCTCAGAAGCAGCTGGACTTTGATTAGAACCAACGTGGATCAGATTGTTAGCAATCTTTAATTGTGGCCCT TTATCCCAGGCTCCCAGACTCAAATCTGTTACAGTTCTGGGACCCAAGAGTTGTTGT |
| mm4_intron_Grip2_chr6_91802660 |
CACTCTCGATTCCTCGGAGCCAATATGGCCTCTGAGCCTGGCATTAAGAGCCACAGCTCTGAGGTGGATGTGGTTTGACT TAGCCCCTGTGTATGGCTGGACCAGATGGTCTCCCCTCACCTGCCATTCTGAG |
| mm4_intergenic_Trdv2-2|Trdv4_chr14_54013324 |
ACTGTGAGTCCTGCCTTCAGGATTCTGACTCCTTTATGGCCATATTCCCAGGCTCCCCGATGCTGAAGTGCAGACCTGGG TT |
| mm4_intron_Nav2_chr7_49271197 |
TCCTAACTGGGAACTTGGGGGTAGGGGGGTGGGGAGCGCTTCGACAGTGGCAACCACAGCTAACATAGATTTCCCCAAAT CTGGATCCTAATCCCAGACTCGGAGGGTGAAGTTGGCAGAGGGACA |
| mm2_intron_Trp63_chr16_25832453 |
AACCGGTATCACCCCTTTGGATAGTACATACATGTTGTTATGCTAACACAAACAAGCTTTACTAGCAGGAGTAGTGATTA TCTCAGGCAGCCTGGGATTAGCAGCCTGGCTGGGAGAGGGGAAGTGGACTGTCTCA |