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Contents:In the table below, Illumina Nextera Handle sequences have been added and highlighted in bold. Primers for the on-target have been added for convenience. The table below is sorted by the CFD off-target score. Sites with very low CFD scores < 0.02 are unlikely to be cleaved, see our study Haeussler et al. 2016, Figure 2.
In the protocol by Matthew Canver, Harvard, two PCRs are run: one PCR to amplify the potential off-target, then a second PCR to extend the handles with Illumina barcodes. Please click here to download the protocol. Alternatively, you can have a look at Fu et al, 2014.
If a primer was not found, the reason is usually that the region around the off-target is too repetitive. To avoid unspecific primers, all repeats are masked for the primer design (not for off-target search). If you think that we should change the parameters here or should use different primer3 settings, please let us know.
| Name | Primer Sequence | Tm | CFD Score |
|---|---|---|---|
| ontarget_mm0_exon_5730457N03Rik/Evx1_chr6_52313776_F | TCGTCGGCAGCGTCCCTTGTCGCCTTAGCTCCTC | 60.1 | 1.00 |
| ontarget_mm0_exon_5730457N03Rik/Evx1_chr6_52313776_R | GTCTCGTGGGCTCGGGTCCTTTCGGCTCTCCATCC | 60.1 | 1.00 |
| mm3_intron_Gramd1b_chr9_40460071_F | Primer3: not found at this Tm | N.d. | 0.87 |
| mm3_intron_Gramd1b_chr9_40460071_R | Primer3: not found at this Tm | N.d. | 0.87 |
| mm3_intron_Spsb1_chr4_149923422_F | TCGTCGGCAGCGTCCACCATAACACCCGGAGACC | 60.1 | 0.80 |
| mm3_intron_Spsb1_chr4_149923422_R | GTCTCGTGGGCTCGGCTTTCCCCTGAAGCCGATGT | 60.0 | 0.80 |
| mm4_exon_A2m_chr6_121673521_F | Primer3: not found at this Tm | N.d. | 0.79 |
| mm4_exon_A2m_chr6_121673521_R | Primer3: not found at this Tm | N.d. | 0.79 |
| mm3_intron_Nfam1_chr15_83032532_F | TCGTCGGCAGCGTCTGAATCCAGACCTCCCAGCT | 60.2 | 0.61 |
| mm3_intron_Nfam1_chr15_83032532_R | GTCTCGTGGGCTCGGGCAGTCAGAGGCCAAGGATT | 60.0 | 0.61 |
| mm4_intron_Zfp710_chr7_80086883_F | TCGTCGGCAGCGTCGGACCTACGTGGGCTCACTA | 60.6 | 0.56 |
| mm4_intron_Zfp710_chr7_80086883_R | GTCTCGTGGGCTCGGGTTGCCTCATCTCTCTGCCC | 60.4 | 0.56 |
| mm4_intergenic_Gm23067|Gm26072_chr5_70258504_F | TCGTCGGCAGCGTCACTCTCTACTCTGATGGCGC | 58.9 | 0.52 |
| mm4_intergenic_Gm23067|Gm26072_chr5_70258504_R | GTCTCGTGGGCTCGGCACCTAGCTTCTCACTTGTCCT | 59.4 | 0.52 |
| mm4_intron_Hs6st3_chr14_119277395_F | TCGTCGGCAGCGTCGGCTTCTGGGCTGTGTAACT | 59.9 | 0.52 |
| mm4_intron_Hs6st3_chr14_119277395_R | GTCTCGTGGGCTCGGGGAAAGCTTAGGGGTGGTACA | 59.3 | 0.52 |
| mm4_intergenic_Gm13621|Il21_chr3_37202750_F | TCGTCGGCAGCGTCTGGCAAAACTCAATCTATCTGCC | 59.3 | 0.49 |
| mm4_intergenic_Gm13621|Il21_chr3_37202750_R | GTCTCGTGGGCTCGGTCCTCCCTGCTCATATGGCT | 60.1 | 0.49 |
| mm4_intron_Hs6st2_chrX_51680854_F | Primer3: not found at this Tm | N.d. | 0.49 |
| mm4_intron_Hs6st2_chrX_51680854_R | Primer3: not found at this Tm | N.d. | 0.49 |
| mm4_intergenic_Tbc1d19|Stim2_chr5_53906468_F | TCGTCGGCAGCGTCTCCACAAAGGCTCTGAGCTC | 59.6 | 0.47 |
| mm4_intergenic_Tbc1d19|Stim2_chr5_53906468_R | GTCTCGTGGGCTCGGTGGCACATGTGACTGCTTGA | 60.1 | 0.47 |
| mm4_intron_Ulk4_chr9_121149483_F | TCGTCGGCAGCGTCCACCTCCTCCCAACACTGTC | 59.9 | 0.42 |
| mm4_intron_Ulk4_chr9_121149483_R | GTCTCGTGGGCTCGGCTAGAGCTGAGCAGGCATCC | 59.9 | 0.42 |
| mm4_intergenic_Gm23727|Gm20594_chr6_79469846_F | Primer3: not found at this Tm | N.d. | 0.41 |
| mm4_intergenic_Gm23727|Gm20594_chr6_79469846_R | Primer3: not found at this Tm | N.d. | 0.41 |
| mm4_intron_Camk2g_chr14_20768720_F | TCGTCGGCAGCGTCGTGTGAAGTGTCCCAGCAGA | 59.8 | 0.40 |
| mm4_intron_Camk2g_chr14_20768720_R | GTCTCGTGGGCTCGGTGAATTCCAGTGCCAGCAGG | 60.6 | 0.40 |
| mm4_intron_Trim42_chr9_97361687_F | Primer3: not found at this Tm | N.d. | 0.39 |
| mm4_intron_Trim42_chr9_97361687_R | Primer3: not found at this Tm | N.d. | 0.39 |
| mm4_intergenic_F830001A07Rik|Rora_chr9_68981068_F | Primer3: not found at this Tm | N.d. | 0.37 |
| mm4_intergenic_F830001A07Rik|Rora_chr9_68981068_R | Primer3: not found at this Tm | N.d. | 0.37 |
| mm3_exon_1700111E14Rik_chr6_36938709_F | TCGTCGGCAGCGTCAACATCCATCACCCTGCTGG | 60.0 | 0.36 |
| mm3_exon_1700111E14Rik_chr6_36938709_R | GTCTCGTGGGCTCGGCCATGCATTGGGAGGAGACA | 59.7 | 0.36 |
| mm4_intergenic_Krtap20-2|Krtap21-1_chr16_89302911_F | Primer3: not found at this Tm | N.d. | 0.34 |
| mm4_intergenic_Krtap20-2|Krtap21-1_chr16_89302911_R | Primer3: not found at this Tm | N.d. | 0.34 |
| mm4_intergenic_Gm14619|Sh2d1a_chrX_42494686_F | TCGTCGGCAGCGTCGGAGGAGGTGAGGAGGTAGG | 60.1 | 0.33 |
| mm4_intergenic_Gm14619|Sh2d1a_chrX_42494686_R | GTCTCGTGGGCTCGGCTGGCTACCTGTGGTGTCTG | 60.0 | 0.33 |
| mm3_intron_Helz_chr11_107682167_F | TCGTCGGCAGCGTCGGGGAATGGAGGGAAAGGAG | 59.4 | 0.32 |
| mm3_intron_Helz_chr11_107682167_R | GTCTCGTGGGCTCGGAAGGTTCCAGCTTTGCACCT | 60.1 | 0.32 |
| mm4_intergenic_Gm25684|Gm9966_chr7_95498283_F | TCGTCGGCAGCGTCCTCCTTCTCCACACAGCCAC | 60.3 | 0.32 |
| mm4_intergenic_Gm25684|Gm9966_chr7_95498283_R | GTCTCGTGGGCTCGGCGAGGTTGCCTGAGTTCCTT | 59.9 | 0.32 |
| mm4_intergenic_Nudcd3|Rps15a-ps6_chr11_6160391_F | Primer3: not found at this Tm | N.d. | 0.31 |
| mm4_intergenic_Nudcd3|Rps15a-ps6_chr11_6160391_R | Primer3: not found at this Tm | N.d. | 0.31 |
| mm3_exon_Gm15506_chr7_98693244_F | Primer3: not found at this Tm | N.d. | 0.31 |
| mm3_exon_Gm15506_chr7_98693244_R | Primer3: not found at this Tm | N.d. | 0.31 |
| mm4_intron_Gm20455_chrX_73100111_F | Primer3: not found at this Tm | N.d. | 0.30 |
| mm4_intron_Gm20455_chrX_73100111_R | Primer3: not found at this Tm | N.d. | 0.30 |
| mm4_intergenic_Xlr3c|Xlr5c_chrX_73275348_F | Primer3: not found at this Tm | N.d. | 0.30 |
| mm4_intergenic_Xlr3c|Xlr5c_chrX_73275348_R | Primer3: not found at this Tm | N.d. | 0.30 |
| mm4_intergenic_Spin2d|Xlr3b_chrX_73189074_F | Primer3: not found at this Tm | N.d. | 0.30 |
| mm4_intergenic_Spin2d|Xlr3b_chrX_73189074_R | Primer3: not found at this Tm | N.d. | 0.30 |
| mm4_intergenic_Spin2-ps2|Xlr3d-ps_chrX_74690913_F | Primer3: not found at this Tm | N.d. | 0.30 |
| mm4_intergenic_Spin2-ps2|Xlr3d-ps_chrX_74690913_R | Primer3: not found at this Tm | N.d. | 0.30 |
| mm3_intergenic_Gm15402|Tcf7l1_chr6_72751629_F | Primer3: not found at this Tm | N.d. | 0.28 |
| mm3_intergenic_Gm15402|Tcf7l1_chr6_72751629_R | Primer3: not found at this Tm | N.d. | 0.28 |
| mm4_intron_Upf3b_chrX_37093000_F | Primer3: not found at this Tm | N.d. | 0.28 |
| mm4_intron_Upf3b_chrX_37093000_R | Primer3: not found at this Tm | N.d. | 0.28 |
| mm3_intron_Fhod3_chr18_24794782_F | Primer3: not found at this Tm | N.d. | 0.28 |
| mm3_intron_Fhod3_chr18_24794782_R | Primer3: not found at this Tm | N.d. | 0.28 |
| mm4_intergenic_Anks1|Gm15597_chr17_27930124_F | Primer3: not found at this Tm | N.d. | 0.27 |
| mm4_intergenic_Anks1|Gm15597_chr17_27930124_R | Primer3: not found at this Tm | N.d. | 0.27 |
| mm4_intergenic_Kif5c|Lypd6b_chr2_49781339_F | Primer3: not found at this Tm | N.d. | 0.27 |
| mm4_intergenic_Kif5c|Lypd6b_chr2_49781339_R | Primer3: not found at this Tm | N.d. | 0.27 |
| mm4_intergenic_Gm16205|Sgcz_chr8_37916668_F | TCGTCGGCAGCGTCAGTGGGTGGCTTCTGTCATG | 59.9 | 0.26 |
| mm4_intergenic_Gm16205|Sgcz_chr8_37916668_R | GTCTCGTGGGCTCGGAGAAGTCCTCAGGTGGTGGT | 60.1 | 0.26 |
| mm4_intergenic_Wdr43|Fam179a_chr17_71666669_F | TCGTCGGCAGCGTCTGCCATCCTCACTCACTGTC | 59.3 | 0.26 |
| mm4_intergenic_Wdr43|Fam179a_chr17_71666669_R | GTCTCGTGGGCTCGGGGGTTCCTTTCTGAGCTGCT | 59.9 | 0.26 |
| mm4_intron_Dcc_chr18_72240061_F | Primer3: not found at this Tm | N.d. | 0.25 |
| mm4_intron_Dcc_chr18_72240061_R | Primer3: not found at this Tm | N.d. | 0.25 |
| mm4_intron_Ajap1_chr4_153427602_F | Primer3: not found at this Tm | N.d. | 0.24 |
| mm4_intron_Ajap1_chr4_153427602_R | Primer3: not found at this Tm | N.d. | 0.24 |
| mm4_intergenic_Exoc4|Gm13854_chr6_33360650_F | Primer3: not found at this Tm | N.d. | 0.24 |
| mm4_intergenic_Exoc4|Gm13854_chr6_33360650_R | Primer3: not found at this Tm | N.d. | 0.24 |
| mm4_intergenic_Epha8|Zbtb40_chr4_136969985_F | TCGTCGGCAGCGTCGGGAGGATAGTGATGGGGCT | 60.4 | 0.23 |
| mm4_intergenic_Epha8|Zbtb40_chr4_136969985_R | GTCTCGTGGGCTCGGACCAAACCAGAGGCCTCATG | 59.9 | 0.23 |
| mm4_intergenic_Ccnt2|Map3k19_chr1_127809724_F | Primer3: not found at this Tm | N.d. | 0.23 |
| mm4_intergenic_Ccnt2|Map3k19_chr1_127809724_R | Primer3: not found at this Tm | N.d. | 0.23 |
| mm4_intron_Scap_chr9_110349418_F | Primer3: not found at this Tm | N.d. | 0.23 |
| mm4_intron_Scap_chr9_110349418_R | Primer3: not found at this Tm | N.d. | 0.23 |
| mm4_intergenic_Tmem108|Gm26360_chr9_103514285_F | Primer3: not found at this Tm | N.d. | 0.23 |
| mm4_intergenic_Tmem108|Gm26360_chr9_103514285_R | Primer3: not found at this Tm | N.d. | 0.23 |
| mm4_intergenic_Gm24376|Gm19980_chr4_44481581_F | TCGTCGGCAGCGTCTGGGTTCTCAAAGGGACAGC | 59.8 | 0.23 |
| mm4_intergenic_Gm24376|Gm19980_chr4_44481581_R | GTCTCGTGGGCTCGGGTCACACCAGGGGCACAATA | 59.9 | 0.23 |
| mm4_intergenic_Gm22845|Nt5c1b_chr12_10239952_F | Primer3: not found at this Tm | N.d. | 0.22 |
| mm4_intergenic_Gm22845|Nt5c1b_chr12_10239952_R | Primer3: not found at this Tm | N.d. | 0.22 |
| mm4_intron_Efcab8_chr2_153793266_F | Primer3: not found at this Tm | N.d. | 0.21 |
| mm4_intron_Efcab8_chr2_153793266_R | Primer3: not found at this Tm | N.d. | 0.21 |
| mm4_intergenic_RP24-86O15.2|Gm10698_chr9_33266403_F | TCGTCGGCAGCGTCTAGGGACCCACCACTCTGTT | 59.8 | 0.21 |
| mm4_intergenic_RP24-86O15.2|Gm10698_chr9_33266403_R | GTCTCGTGGGCTCGGTCCTCCAGGGATCTTCAGCA | 59.9 | 0.21 |
| mm4_intergenic_Tmem200c|Epb4.1l3_chr17_69075556_F | TCGTCGGCAGCGTCGTGTGCACTTGTGTGTCTGG | 59.6 | 0.21 |
| mm4_intergenic_Tmem200c|Epb4.1l3_chr17_69075556_R | GTCTCGTGGGCTCGGTACTTCGGCCTTGGAACAGG | 59.6 | 0.21 |
| mm4_intergenic_Snx16|Gm22795_chr3_10756552_F | Primer3: not found at this Tm | N.d. | 0.20 |
| mm4_intergenic_Snx16|Gm22795_chr3_10756552_R | Primer3: not found at this Tm | N.d. | 0.20 |
| mm3_intron_Bmp7_chr2_172881531_F | TCGTCGGCAGCGTCCGTGCACAGGTTCCCCTAAT | 60.0 | 0.20 |
| mm3_intron_Bmp7_chr2_172881531_R | GTCTCGTGGGCTCGGGGGCGCTCTTTTCTGTACCT | 60.0 | 0.20 |
| mm4_intron_Grid2ip_chr5_143374739_F | Primer3: not found at this Tm | N.d. | 0.19 |
| mm4_intron_Grid2ip_chr5_143374739_R | Primer3: not found at this Tm | N.d. | 0.19 |
| mm4_intergenic_AU022754|Mirlet7c-2_chr15_85608588_F | Primer3: not found at this Tm | N.d. | 0.19 |
| mm4_intergenic_AU022754|Mirlet7c-2_chr15_85608588_R | Primer3: not found at this Tm | N.d. | 0.19 |
| mm4_intergenic_Plac9b|Tmem254b_chr14_26192805_F | Primer3: not found at this Tm | N.d. | 0.19 |
| mm4_intergenic_Plac9b|Tmem254b_chr14_26192805_R | Primer3: not found at this Tm | N.d. | 0.19 |
| mm4_intergenic_Plac9b|Tmem254b_chr14_26191068_F | Primer3: not found at this Tm | N.d. | 0.19 |
| mm4_intergenic_Plac9b|Tmem254b_chr14_26191068_R | Primer3: not found at this Tm | N.d. | 0.19 |
| mm4_intergenic_Plac9a|Tmem254a_chr14_25913435_F | Primer3: not found at this Tm | N.d. | 0.19 |
| mm4_intergenic_Plac9a|Tmem254a_chr14_25913435_R | Primer3: not found at this Tm | N.d. | 0.19 |
| mm4_intergenic_Plac9a|Tmem254a_chr14_25911704_F | Primer3: not found at this Tm | N.d. | 0.19 |
| mm4_intergenic_Plac9a|Tmem254a_chr14_25911704_R | Primer3: not found at this Tm | N.d. | 0.19 |
| mm4_intergenic_Gm9780|Tmem254c_chr14_26053191_F | Primer3: not found at this Tm | N.d. | 0.19 |
| mm4_intergenic_Gm9780|Tmem254c_chr14_26053191_R | Primer3: not found at this Tm | N.d. | 0.19 |
| mm4_intergenic_Gm9780|Tmem254c_chr14_26051454_F | Primer3: not found at this Tm | N.d. | 0.19 |
| mm4_intergenic_Gm9780|Tmem254c_chr14_26051454_R | Primer3: not found at this Tm | N.d. | 0.19 |
| mm3_intergenic_Gm10258|Mecom_chr3_30297017_F | TCGTCGGCAGCGTCTCTCTTCAGCACAGTCATCTCA | 58.8 | 0.19 |
| mm3_intergenic_Gm10258|Mecom_chr3_30297017_R | GTCTCGTGGGCTCGGGATGACGATGATGGCCTCCC | 60.3 | 0.19 |
| mm4_intergenic_Gm24246|Pik3c3_chr18_29057527_F | Primer3: not found at this Tm | N.d. | 0.18 |
| mm4_intergenic_Gm24246|Pik3c3_chr18_29057527_R | Primer3: not found at this Tm | N.d. | 0.18 |
| mm3_intergenic_Polr1d|Gsx1_chr5_147123663_F | TCGTCGGCAGCGTCAAGGAACAGGTCTCGTGAGG | 59.0 | 0.18 |
| mm3_intergenic_Polr1d|Gsx1_chr5_147123663_R | GTCTCGTGGGCTCGGGAGATGGTAGATGCCCAGGC | 59.9 | 0.18 |
| mm4_intergenic_Clstn2|4921534H16Rik_chr9_97980374_F | TCGTCGGCAGCGTCGCCTTTCCCAGTGAGCTCAT | 60.0 | 0.18 |
| mm4_intergenic_Clstn2|4921534H16Rik_chr9_97980374_R | GTCTCGTGGGCTCGGATGTGCAGTTGCTCTGGTGA | 59.8 | 0.18 |
| mm4_intergenic_Gm20033|Klf3_chr5_64811106_F | Primer3: not found at this Tm | N.d. | 0.17 |
| mm4_intergenic_Gm20033|Klf3_chr5_64811106_R | Primer3: not found at this Tm | N.d. | 0.17 |
| mm4_intron_Zfp536_chr7_37647061_F | TCGTCGGCAGCGTCCTCTTTCCTCTCACTGGCCG | 60.1 | 0.17 |
| mm4_intron_Zfp536_chr7_37647061_R | GTCTCGTGGGCTCGGGACAGGCCTTGAGAACAGGT | 59.6 | 0.17 |
| mm3_intron_Col13a1_chr10_61876825_F | Primer3: not found at this Tm | N.d. | 0.17 |
| mm3_intron_Col13a1_chr10_61876825_R | Primer3: not found at this Tm | N.d. | 0.17 |
| mm4_intergenic_Fgf10|Nnt_chr13_119176812_F | TCGTCGGCAGCGTCAGGGCATTGTTGTCAGAGGT | 59.2 | 0.16 |
| mm4_intergenic_Fgf10|Nnt_chr13_119176812_R | GTCTCGTGGGCTCGGGAACAGCCAGGTGAGGATCC | 60.1 | 0.16 |
| mm4_intron_D430042O09Rik_chr7_125725589_F | Primer3: not found at this Tm | N.d. | 0.16 |
| mm4_intron_D430042O09Rik_chr7_125725589_R | Primer3: not found at this Tm | N.d. | 0.16 |
| mm4_intron_Bsn_chr9_108172124_F | TCGTCGGCAGCGTCGCTACTCACACTGACCCTGG | 59.7 | 0.15 |
| mm4_intron_Bsn_chr9_108172124_R | GTCTCGTGGGCTCGGAGTCTTTTGTTTGGCATGGAGC | 59.9 | 0.15 |
| mm3_intron_Arnt_chr3_95445972_F | Primer3: not found at this Tm | N.d. | 0.15 |
| mm3_intron_Arnt_chr3_95445972_R | Primer3: not found at this Tm | N.d. | 0.15 |
| mm3_intergenic_Ipmk|Gm22937_chr10_71784857_F | Primer3: not found at this Tm | N.d. | 0.15 |
| mm3_intergenic_Ipmk|Gm22937_chr10_71784857_R | Primer3: not found at this Tm | N.d. | 0.15 |
| mm4_intergenic_Gm14078|Macrod2_chr2_140981423_F | Primer3: not found at this Tm | N.d. | 0.14 |
| mm4_intergenic_Gm14078|Macrod2_chr2_140981423_R | Primer3: not found at this Tm | N.d. | 0.14 |
| mm2_intergenic_Hsfy2|Satb2_chr1_56781138_F | Primer3: not found at this Tm | N.d. | 0.14 |
| mm2_intergenic_Hsfy2|Satb2_chr1_56781138_R | Primer3: not found at this Tm | N.d. | 0.14 |
| mm3_intergenic_En1|B230209K01Rik_chr1_120666689_F | Primer3: not found at this Tm | N.d. | 0.14 |
| mm3_intergenic_En1|B230209K01Rik_chr1_120666689_R | Primer3: not found at this Tm | N.d. | 0.14 |
| mm4_intergenic_Runx3|Clic4_chr4_135189732_F | TCGTCGGCAGCGTCCATGCTGATGGTCCCTGTGT | 60.0 | 0.14 |
| mm4_intergenic_Runx3|Clic4_chr4_135189732_R | GTCTCGTGGGCTCGGGCTTTAGCACACAGGCTTGG | 59.7 | 0.14 |
| mm4_intron_Alx3_chr3_107600294_F | TCGTCGGCAGCGTCCCCCATCACCACATCTTCCC | 60.1 | 0.13 |
| mm4_intron_Alx3_chr3_107600294_R | GTCTCGTGGGCTCGGCTTCCCCTTCCCTTCCTCCT | 60.2 | 0.13 |
| mm4_intron_Tspan18_chr2_93278586_F | TCGTCGGCAGCGTCAGCTGGGCTCCCACTACTAA | 59.9 | 0.13 |
| mm4_intron_Tspan18_chr2_93278586_R | GTCTCGTGGGCTCGGAAGTGGGGTGATCTGCAAGG | 59.9 | 0.13 |
| mm4_exon_Rgs12_chr5_35022880_F | TCGTCGGCAGCGTCACACATCCTGTCACCAGCAG | 59.9 | 0.13 |
| mm4_exon_Rgs12_chr5_35022880_R | GTCTCGTGGGCTCGGGTCAAGGGCACAGTCCTCTC | 60.0 | 0.13 |
| mm4_intergenic_Gm15663|Mettl25_chr10_105667539_F | TCGTCGGCAGCGTCTTTGGAACCCTCATCACCAC | 57.7 | 0.13 |
| mm4_intergenic_Gm15663|Mettl25_chr10_105667539_R | GTCTCGTGGGCTCGGGTTTTGCCTGGTGATCGCAG | 60.1 | 0.13 |
| mm4_intergenic_Gm23437|Gm24818_chr14_107256195_F | Primer3: not found at this Tm | N.d. | 0.13 |
| mm4_intergenic_Gm23437|Gm24818_chr14_107256195_R | Primer3: not found at this Tm | N.d. | 0.13 |
| mm3_intron_Fam19a5_chr15_87728716_F | TCGTCGGCAGCGTCTTCCTGAGCTCTGACCCTGA | 59.8 | 0.12 |
| mm3_intron_Fam19a5_chr15_87728716_R | GTCTCGTGGGCTCGGCGCAGAACTGGCTAAGGACA | 60.0 | 0.12 |
| mm4_intergenic_Lrrc8c|Lrrc8d_chr5_105643602_F | Primer3: not found at this Tm | N.d. | 0.12 |
| mm4_intergenic_Lrrc8c|Lrrc8d_chr5_105643602_R | Primer3: not found at this Tm | N.d. | 0.12 |
| mm4_intergenic_Diap3|Gm23278_chr14_87159271_F | Primer3: not found at this Tm | N.d. | 0.12 |
| mm4_intergenic_Diap3|Gm23278_chr14_87159271_R | Primer3: not found at this Tm | N.d. | 0.12 |
| mm4_intergenic_Ly6h|Gpihbp1_chr15_75581985_F | Primer3: not found at this Tm | N.d. | 0.12 |
| mm4_intergenic_Ly6h|Gpihbp1_chr15_75581985_R | Primer3: not found at this Tm | N.d. | 0.12 |
| mm4_intergenic_Gm23437|Gm24818_chr14_107091476_F | Primer3: not found at this Tm | N.d. | 0.12 |
| mm4_intergenic_Gm23437|Gm24818_chr14_107091476_R | Primer3: not found at this Tm | N.d. | 0.12 |
| mm3_intergenic_1700061J23Rik|Gm24398_chr11_23172263_F | Primer3: not found at this Tm | N.d. | 0.11 |
| mm3_intergenic_1700061J23Rik|Gm24398_chr11_23172263_R | Primer3: not found at this Tm | N.d. | 0.11 |
| mm4_intergenic_Vmn2r99|Vmn2r-ps121_chr17_19431116_F | Primer3: not found at this Tm | N.d. | 0.11 |
| mm4_intergenic_Vmn2r99|Vmn2r-ps121_chr17_19431116_R | Primer3: not found at this Tm | N.d. | 0.11 |
| mm4_intergenic_Gm26252|Gm22838_chr5_99904279_F | Primer3: not found at this Tm | N.d. | 0.11 |
| mm4_intergenic_Gm26252|Gm22838_chr5_99904279_R | Primer3: not found at this Tm | N.d. | 0.11 |
| mm4_intergenic_Spock1|Klhl3_chr13_57928746_F | TCGTCGGCAGCGTCACACACATCTCAGGCTGTGA | 58.9 | 0.11 |
| mm4_intergenic_Spock1|Klhl3_chr13_57928746_R | GTCTCGTGGGCTCGGGGTCACAGCATATCAAGTCTGC | 59.3 | 0.11 |
| mm4_intergenic_D7Ertd443e|Dock1_chr7_134500625_F | TCGTCGGCAGCGTCCAGAACTCCCAGCTGGTAGC | 60.1 | 0.11 |
| mm4_intergenic_D7Ertd443e|Dock1_chr7_134500625_R | GTCTCGTGGGCTCGGTTTCTTCCCTGGCTGCCTTT | 59.8 | 0.11 |
| mm2_intergenic_Cep112|Gm11669_chr11_108815770_F | TCGTCGGCAGCGTCAACAAAGACGCTGATGCTGG | 59.1 | 0.11 |
| mm2_intergenic_Cep112|Gm11669_chr11_108815770_R | GTCTCGTGGGCTCGGTCATGGGCACTTGGACTTCC | 59.9 | 0.11 |
| mm4_intron_Vps13d_chr4_144986647_F | Primer3: not found at this Tm | N.d. | 0.11 |
| mm4_intron_Vps13d_chr4_144986647_R | Primer3: not found at this Tm | N.d. | 0.11 |
| mm4_intergenic_Acadsb|Hmx3_chr7_131448505_F | TCGTCGGCAGCGTCATAAGTGAGGCTCCATGGCG | 59.8 | 0.11 |
| mm4_intergenic_Acadsb|Hmx3_chr7_131448505_R | GTCTCGTGGGCTCGGCCTAGTCCTCCACGGGTACA | 60.0 | 0.11 |
| mm4_intron_Entpd1_chr19_40714872_F | TCGTCGGCAGCGTCCGGCGCCTGTTTATAGGGTA | 59.6 | 0.11 |
| mm4_intron_Entpd1_chr19_40714872_R | GTCTCGTGGGCTCGGCCCCACCCCTTTAAAGTGCT | 59.8 | 0.11 |
| mm4_intergenic_Gmnc|Ostn_chr16_27191711_F | Primer3: not found at this Tm | N.d. | 0.10 |
| mm4_intergenic_Gmnc|Ostn_chr16_27191711_R | Primer3: not found at this Tm | N.d. | 0.10 |
| mm4_intron_Arhgef17_chr7_100880744_F | Primer3: not found at this Tm | N.d. | 0.10 |
| mm4_intron_Arhgef17_chr7_100880744_R | Primer3: not found at this Tm | N.d. | 0.10 |
| mm4_intergenic_Vasn/Dnaja3|Coro7_chr16_4642419_F | TCGTCGGCAGCGTCCCACATTCCAGAGTCAGCCC | 60.3 | 0.10 |
| mm4_intergenic_Vasn/Dnaja3|Coro7_chr16_4642419_R | GTCTCGTGGGCTCGGCCAAACTGAGGTGGCCTGAA | 60.1 | 0.10 |
| mm4_intergenic_Gm10480|5730507C01Rik_chr12_18227428_F | TCGTCGGCAGCGTCTGAGTTCTCTCAGAATGACAGCA | 59.4 | 0.10 |
| mm4_intergenic_Gm10480|5730507C01Rik_chr12_18227428_R | GTCTCGTGGGCTCGGTCCATTCCCTCTGACTGGAA | 57.6 | 0.10 |
| mm4_intergenic_Gm12648|Gm12654_chr4_94292653_F | Primer3: not found at this Tm | N.d. | 0.10 |
| mm4_intergenic_Gm12648|Gm12654_chr4_94292653_R | Primer3: not found at this Tm | N.d. | 0.10 |
| mm4_intron_Rasgrp3_chr17_75503516_F | TCGTCGGCAGCGTCAGGTCAGTCCATGGAGCCTA | 59.6 | 0.10 |
| mm4_intron_Rasgrp3_chr17_75503516_R | GTCTCGTGGGCTCGGATCATGCTCCTTGTGGGTGT | 59.2 | 0.10 |
| mm4_exon_Rnf11_chr4_109454160_F | Primer3: not found at this Tm | N.d. | 0.09 |
| mm4_exon_Rnf11_chr4_109454160_R | Primer3: not found at this Tm | N.d. | 0.09 |
| mm4_intergenic_Srrm4|4930569F06Rik_chr5_116800124_F | Primer3: not found at this Tm | N.d. | 0.09 |
| mm4_intergenic_Srrm4|4930569F06Rik_chr5_116800124_R | Primer3: not found at this Tm | N.d. | 0.09 |
| mm4_intergenic_Krt2|Krt1_chr15_101823889_F | Primer3: not found at this Tm | N.d. | 0.09 |
| mm4_intergenic_Krt2|Krt1_chr15_101823889_R | Primer3: not found at this Tm | N.d. | 0.09 |
| mm4_intergenic_Gm25658|Atp2b1_chr10_98703224_F | TCGTCGGCAGCGTCGCACACCTGCTTGTCCTCTT | 60.5 | 0.09 |
| mm4_intergenic_Gm25658|Atp2b1_chr10_98703224_R | GTCTCGTGGGCTCGGGCATTCAGGTTAAAATCCTGGCT | 59.5 | 0.09 |
| mm4_intergenic_Gm27028/Mir30c-2|Ogfrl1_chr1_23332887_F | TCGTCGGCAGCGTCTCCCCAAGCAGGTTGTCTTG | 60.1 | 0.09 |
| mm4_intergenic_Gm27028/Mir30c-2|Ogfrl1_chr1_23332887_R | GTCTCGTGGGCTCGGATTTGCTGTCCCCTCTGAGG | 59.3 | 0.09 |
| mm4_intron_Has2os_chr15_56692956_F | Primer3: not found at this Tm | N.d. | 0.09 |
| mm4_intron_Has2os_chr15_56692956_R | Primer3: not found at this Tm | N.d. | 0.09 |
| mm3_intron_A530013C23Rik_chr2_167691379_F | TCGTCGGCAGCGTCCTGCTGTGAGGGATTCTGGG | 60.1 | 0.09 |
| mm3_intron_A530013C23Rik_chr2_167691379_R | GTCTCGTGGGCTCGGTTCACCAACCAGAGTCGCTG | 60.2 | 0.09 |
| mm4_intergenic_Gm26262|Trim36_chr18_46060318_F | Primer3: not found at this Tm | N.d. | 0.09 |
| mm4_intergenic_Gm26262|Trim36_chr18_46060318_R | Primer3: not found at this Tm | N.d. | 0.09 |
| mm4_intergenic_Mthfr-ps1|Gm25756_chr5_78551417_F | Primer3: not found at this Tm | N.d. | 0.09 |
| mm4_intergenic_Mthfr-ps1|Gm25756_chr5_78551417_R | Primer3: not found at this Tm | N.d. | 0.09 |
| mm4_intergenic_Gm24750|Gm24590_chr12_61948702_F | Primer3: not found at this Tm | N.d. | 0.08 |
| mm4_intergenic_Gm24750|Gm24590_chr12_61948702_R | Primer3: not found at this Tm | N.d. | 0.08 |
| mm4_intron_Rasa3_chr8_13595223_F | TCGTCGGCAGCGTCACACTTGGCTTTGGTCTCCT | 59.1 | 0.08 |
| mm4_intron_Rasa3_chr8_13595223_R | GTCTCGTGGGCTCGGACATGACTGTGTCTCGGGTG | 59.6 | 0.08 |
| mm4_intergenic_Gm16320|Gm26260_chr10_119510752_F | Primer3: not found at this Tm | N.d. | 0.08 |
| mm4_intergenic_Gm16320|Gm26260_chr10_119510752_R | Primer3: not found at this Tm | N.d. | 0.08 |
| mm4_intergenic_Gm5976|Tmem194b_chr1_52600157_F | TCGTCGGCAGCGTCGGGTGCTGTAGGCTTGCATA | 60.1 | 0.08 |
| mm4_intergenic_Gm5976|Tmem194b_chr1_52600157_R | GTCTCGTGGGCTCGGAGTAGTTTCTGCTGCTGGGC | 60.3 | 0.08 |
| mm4_intergenic_Gm7052|Zfp943_chr17_22050735_F | TCGTCGGCAGCGTCCCAGCCTGGGAGAACACAAT | 59.9 | 0.08 |
| mm4_intergenic_Gm7052|Zfp943_chr17_22050735_R | GTCTCGTGGGCTCGGAACCATCCCAGCATGCATCA | 60.0 | 0.08 |
| mm4_intron_Tspan9_chr6_128124518_F | Primer3: not found at this Tm | N.d. | 0.08 |
| mm4_intron_Tspan9_chr6_128124518_R | Primer3: not found at this Tm | N.d. | 0.08 |
| mm2_intron_Myom3_chr4_135795225_F | TCGTCGGCAGCGTCGGACAAGCCAGGTAGGATGG | 59.8 | 0.08 |
| mm2_intron_Myom3_chr4_135795225_R | GTCTCGTGGGCTCGGCTGTACCCTCAGGCTTTCCC | 59.7 | 0.08 |
| mm4_intergenic_Sp7|Gm23590_chr15_102370868_F | TCGTCGGCAGCGTCCTACCTCCACTCTCACAGGC | 59.1 | 0.08 |
| mm4_intergenic_Sp7|Gm23590_chr15_102370868_R | GTCTCGTGGGCTCGGGGGGTTTATACTGGAAGGGCC | 60.1 | 0.08 |
| mm4_intron_Stard9_chr2_120690687_F | Primer3: not found at this Tm | N.d. | 0.08 |
| mm4_intron_Stard9_chr2_120690687_R | Primer3: not found at this Tm | N.d. | 0.08 |
| mm4_intron_Plagl1_chr10_13109855_F | Primer3: not found at this Tm | N.d. | 0.08 |
| mm4_intron_Plagl1_chr10_13109855_R | Primer3: not found at this Tm | N.d. | 0.08 |
| mm4_intron_Wscd2_chr5_113578089_F | TCGTCGGCAGCGTCACAGCAGTCAAGCTAGCCAG | 60.0 | 0.07 |
| mm4_intron_Wscd2_chr5_113578089_R | GTCTCGTGGGCTCGGACAGAGAGAGGGGTTGCTCA | 60.1 | 0.07 |
| mm4_exon_Lhx8_chr3_154328136_F | Primer3: not found at this Tm | N.d. | 0.07 |
| mm4_exon_Lhx8_chr3_154328136_R | Primer3: not found at this Tm | N.d. | 0.07 |
| mm4_intron_Gm14055_chr2_137309527_F | Primer3: not found at this Tm | N.d. | 0.07 |
| mm4_intron_Gm14055_chr2_137309527_R | Primer3: not found at this Tm | N.d. | 0.07 |
| mm4_intron_St6galnac1_chr11_116772805_F | TCGTCGGCAGCGTCTCTGGGAGTGTGCATTCCAC | 59.9 | 0.07 |
| mm4_intron_St6galnac1_chr11_116772805_R | GTCTCGTGGGCTCGGCCGTGCTGTTCTATCCCAGG | 60.1 | 0.07 |
| mm4_intron_Gm11735_chr11_116749065_F | TCGTCGGCAGCGTCCGTTCCACTTCTTGCCTCCT | 59.9 | 0.07 |
| mm4_intron_Gm11735_chr11_116749065_R | GTCTCGTGGGCTCGGAAACAGAGCCGTGCTGTTCT | 60.1 | 0.07 |
| mm4_intergenic_Cd164l2|Map3k6_chr4_133226396_F | TCGTCGGCAGCGTCACGGCACCTTGGTTAGATGT | 59.3 | 0.07 |
| mm4_intergenic_Cd164l2|Map3k6_chr4_133226396_R | GTCTCGTGGGCTCGGAGTGGGCAGCAGATTAACCC | 60.0 | 0.07 |
| mm4_intron_Ppp1r32_chr19_10478781_F | Primer3: not found at this Tm | N.d. | 0.07 |
| mm4_intron_Ppp1r32_chr19_10478781_R | Primer3: not found at this Tm | N.d. | 0.07 |
| mm4_intergenic_A630031M04Rik|1700112K13Rik_chr4_127720800_F | TCGTCGGCAGCGTCGGATGGGTGGCTTTGGATCA | 60.0 | 0.07 |
| mm4_intergenic_A630031M04Rik|1700112K13Rik_chr4_127720800_R | GTCTCGTGGGCTCGGGTGTCTGCAAAGATGTGTTGCT | 59.9 | 0.07 |
| mm4_intergenic_Tjp1|Gm7546_chr7_65407381_F | Primer3: not found at this Tm | N.d. | 0.07 |
| mm4_intergenic_Tjp1|Gm7546_chr7_65407381_R | Primer3: not found at this Tm | N.d. | 0.07 |
| mm4_intergenic_Wdr1|4930421P07Rik_chr5_38564068_F | Primer3: not found at this Tm | N.d. | 0.07 |
| mm4_intergenic_Wdr1|4930421P07Rik_chr5_38564068_R | Primer3: not found at this Tm | N.d. | 0.07 |
| mm4_intron_Rps6ka5_chr12_100715699_F | Primer3: not found at this Tm | N.d. | 0.07 |
| mm4_intron_Rps6ka5_chr12_100715699_R | Primer3: not found at this Tm | N.d. | 0.07 |
| mm4_intergenic_mmu-mir-6393|Zdhhc25_chr15_88488224_F | TCGTCGGCAGCGTCTGCTGGAATGGCCTACCCTA | 60.3 | 0.07 |
| mm4_intergenic_mmu-mir-6393|Zdhhc25_chr15_88488224_R | GTCTCGTGGGCTCGGCAGTGGACTTTCCCAGGTGG | 60.2 | 0.07 |
| mm4_intron_Arhgap18_chr10_26835187_F | TCGTCGGCAGCGTCGCCAGGTTCCAGCTCAGAAA | 60.2 | 0.07 |
| mm4_intron_Arhgap18_chr10_26835187_R | GTCTCGTGGGCTCGGACACCTTCCTGGAACCCCT | 60.0 | 0.07 |
| mm4_intergenic_4922501C03Rik|Tbx18_chr9_87396286_F | Primer3: not found at this Tm | N.d. | 0.06 |
| mm4_intergenic_4922501C03Rik|Tbx18_chr9_87396286_R | Primer3: not found at this Tm | N.d. | 0.06 |
| mm3_intron_Hvcn1_chr5_122239236_F | TCGTCGGCAGCGTCTCACCTAGAGCTGTCCCCTC | 60.0 | 0.06 |
| mm3_intron_Hvcn1_chr5_122239236_R | GTCTCGTGGGCTCGGACACACCCACCCCAAACAAA | 60.2 | 0.06 |
| mm4_intergenic_Rps15a-ps6|Gm11969_chr11_6180317_F | TCGTCGGCAGCGTCTCCTCAGGAAACAGCAACCA | 59.1 | 0.06 |
| mm4_intergenic_Rps15a-ps6|Gm11969_chr11_6180317_R | GTCTCGTGGGCTCGGACCGAAGCTGCGTCTAAGAC | 60.1 | 0.06 |
| mm4_intergenic_Gm13358|Egfl7_chr2_26578103_F | TCGTCGGCAGCGTCCGGGTGGACTGTGTGAACAA | 60.4 | 0.06 |
| mm4_intergenic_Gm13358|Egfl7_chr2_26578103_R | GTCTCGTGGGCTCGGGGCTCCTTGTAACACTGGCT | 59.9 | 0.06 |
| mm3_intergenic_Evx2|Hoxd13_chr2_74665452_F | TCGTCGGCAGCGTCTCAGCAGTCTGGCTCAACAG | 59.9 | 0.06 |
| mm3_intergenic_Evx2|Hoxd13_chr2_74665452_R | GTCTCGTGGGCTCGGCTGAAAGGGCCCACAGGTAG | 60.0 | 0.06 |
| mm4_exon_E2f2_chr4_136194340_F | TCGTCGGCAGCGTCTCCAGAGAGGTGTACCCAGG | 59.9 | 0.05 |
| mm4_exon_E2f2_chr4_136194340_R | GTCTCGTGGGCTCGGAAAAGTGCTGCCCCACTGAG | 60.8 | 0.05 |
| mm4_exon_Vps11_chr9_44361444_F | TCGTCGGCAGCGTCCGTGCGCTGAGGAAAGAAAC | 60.1 | 0.05 |
| mm4_exon_Vps11_chr9_44361444_R | GTCTCGTGGGCTCGGCCTCCTGGCATCACTGTCTG | 60.1 | 0.05 |
| mm3_intergenic_Gm8765|Gm22199_chr13_50978165_F | TCGTCGGCAGCGTCCCAAGCCCAGTCTCTCAGTC | 59.7 | 0.05 |
| mm3_intergenic_Gm8765|Gm22199_chr13_50978165_R | GTCTCGTGGGCTCGGAAATGAGCAGGAGGTAGGCG | 59.8 | 0.05 |
| mm4_intron_Nfasc_chr1_132610521_F | TCGTCGGCAGCGTCAGGTTGCTTCCTTGCCCATT | 60.1 | 0.05 |
| mm4_intron_Nfasc_chr1_132610521_R | GTCTCGTGGGCTCGGGCATCTACCTTGAGCTCCCC | 59.8 | 0.05 |
| mm4_intron_B230209K01Rik_chr1_121112722_F | TCGTCGGCAGCGTCTAAGTGTGGCAAGGGTCAGG | 59.6 | 0.05 |
| mm4_intron_B230209K01Rik_chr1_121112722_R | GTCTCGTGGGCTCGGTCCTAGAAGGCCAAGGGTGA | 59.8 | 0.05 |
| mm4_intergenic_6430573F11Rik|Dlc1_chr8_36548280_F | TCGTCGGCAGCGTCCCTTCCCTGGCCTTGAACTT | 59.8 | 0.05 |
| mm4_intergenic_6430573F11Rik|Dlc1_chr8_36548280_R | GTCTCGTGGGCTCGGCCGGGGCACTGTAAGAACAA | 60.2 | 0.05 |
| mm4_intron_Fam227a_chr15_79637200_F | TCGTCGGCAGCGTCGAAGTGACGAGAGCCTCTGG | 59.8 | 0.05 |
| mm4_intron_Fam227a_chr15_79637200_R | GTCTCGTGGGCTCGGGGAGCATCCTCAGTGACACC | 60.1 | 0.05 |
| mm4_intergenic_Gm7910|Khdrbs2_chr1_31969123_F | Primer3: not found at this Tm | N.d. | 0.04 |
| mm4_intergenic_Gm7910|Khdrbs2_chr1_31969123_R | Primer3: not found at this Tm | N.d. | 0.04 |
| mm4_intron_Gria4_chr9_4659899_F | Primer3: not found at this Tm | N.d. | 0.04 |
| mm4_intron_Gria4_chr9_4659899_R | Primer3: not found at this Tm | N.d. | 0.04 |
| mm2_intergenic_Ccr3|Ccr2_chr9_124051334_F | TCGTCGGCAGCGTCAGAGGGGAGTTCAGCTCGTA | 59.6 | 0.04 |
| mm2_intergenic_Ccr3|Ccr2_chr9_124051334_R | GTCTCGTGGGCTCGGATGGAGAGGCAGGAGAGAGG | 60.1 | 0.04 |
| mm4_intergenic_Ddx18|Gm15394_chr1_121607925_F | Primer3: not found at this Tm | N.d. | 0.04 |
| mm4_intergenic_Ddx18|Gm15394_chr1_121607925_R | Primer3: not found at this Tm | N.d. | 0.04 |
| mm4_intergenic_Tgfbi|SMAD5-AS1_1_chr13_56665906_F | Primer3: not found at this Tm | N.d. | 0.04 |
| mm4_intergenic_Tgfbi|SMAD5-AS1_1_chr13_56665906_R | Primer3: not found at this Tm | N.d. | 0.04 |
| mm4_intergenic_Gjb6|Cryl1_chr14_57146128_F | TCGTCGGCAGCGTCTGCTTGATGCTGTTCCTTGTG | 59.3 | 0.04 |
| mm4_intergenic_Gjb6|Cryl1_chr14_57146128_R | GTCTCGTGGGCTCGGCTAACCACCAGGCTGCTCAC | 60.6 | 0.04 |
| mm4_exon_Lama5_chr2_180180408_F | TCGTCGGCAGCGTCTAGAGGCTGACCACCTCCTC | 60.0 | 0.04 |
| mm4_exon_Lama5_chr2_180180408_R | GTCTCGTGGGCTCGGGTGTGGTTGGTCTCTGGGAG | 59.9 | 0.04 |
| mm4_intron_Tmcc3_chr10_94494779_F | Primer3: not found at this Tm | N.d. | 0.04 |
| mm4_intron_Tmcc3_chr10_94494779_R | Primer3: not found at this Tm | N.d. | 0.04 |
| mm4_intergenic_Gm17033|4933406K04Rik_chr12_106577109_F | TCGTCGGCAGCGTCACATCATTGAAGGGAGCGCT | 59.7 | 0.04 |
| mm4_intergenic_Gm17033|4933406K04Rik_chr12_106577109_R | GTCTCGTGGGCTCGGAAGGGCAACATCAGGGGAAG | 59.9 | 0.04 |
| mm4_intergenic_Gm23432|Ptbp2_chr3_119685224_F | Primer3: not found at this Tm | N.d. | 0.04 |
| mm4_intergenic_Gm23432|Ptbp2_chr3_119685224_R | Primer3: not found at this Tm | N.d. | 0.04 |
| mm4_intron_Rufy4_chr1_74137439_F | Primer3: not found at this Tm | N.d. | 0.04 |
| mm4_intron_Rufy4_chr1_74137439_R | Primer3: not found at this Tm | N.d. | 0.04 |
| mm4_intron_Rnf165_chr18_77503270_F | TCGTCGGCAGCGTCAGCTGTCATCAGACTGTGCC | 60.0 | 0.04 |
| mm4_intron_Rnf165_chr18_77503270_R | GTCTCGTGGGCTCGGGGACCCCATTTCCACTCTGG | 60.0 | 0.04 |
| mm4_intergenic_Gm12467|Gm12475_chr4_52264346_F | Primer3: not found at this Tm | N.d. | 0.04 |
| mm4_intergenic_Gm12467|Gm12475_chr4_52264346_R | Primer3: not found at this Tm | N.d. | 0.04 |
| mm3_exon_Ubr2_chr17_46928588_F | Primer3: not found at this Tm | N.d. | 0.04 |
| mm3_exon_Ubr2_chr17_46928588_R | Primer3: not found at this Tm | N.d. | 0.04 |
| mm4_intron_Phactr2_chr10_13379077_F | TCGTCGGCAGCGTCGCACTGTCAAACTCCACACAC | 59.9 | 0.03 |
| mm4_intron_Phactr2_chr10_13379077_R | GTCTCGTGGGCTCGGAACCCCACAGTCCTGCTTTT | 59.7 | 0.03 |
| mm4_exon_Psmb8/Gm20496_chr17_34199021_F | TCGTCGGCAGCGTCCCTAGGTCTCAAGCCCCTCT | 60.0 | 0.03 |
| mm4_exon_Psmb8/Gm20496_chr17_34199021_R | GTCTCGTGGGCTCGGTGGTAGGCGACTTCAAGGTG | 59.6 | 0.03 |
| mm3_intergenic_Gm16286|Txnl4a_chr18_80214943_F | TCGTCGGCAGCGTCTGGTTGTGCAGTTGGTGTGT | 60.6 | 0.03 |
| mm3_intergenic_Gm16286|Txnl4a_chr18_80214943_R | GTCTCGTGGGCTCGGTAAACGAGCTCACGCCAGAG | 60.1 | 0.03 |
| mm4_intron_Bmp6_chr13_38483583_F | TCGTCGGCAGCGTCTCCCTGTCACTCTACCTACTGT | 59.3 | 0.03 |
| mm4_intron_Bmp6_chr13_38483583_R | GTCTCGTGGGCTCGGCAGTGCAGCATCGACCTGA | 60.0 | 0.03 |
| mm4_exon_Lrrc31_chr3_30683708_F | Primer3: not found at this Tm | N.d. | 0.03 |
| mm4_exon_Lrrc31_chr3_30683708_R | Primer3: not found at this Tm | N.d. | 0.03 |
| mm3_intergenic_Prdm16|B230104I21Rik_chr4_154346759_F | Primer3: not found at this Tm | N.d. | 0.03 |
| mm3_intergenic_Prdm16|B230104I21Rik_chr4_154346759_R | Primer3: not found at this Tm | N.d. | 0.03 |
| mm4_intergenic_Zfp266|Gm26733_chr9_20530018_F | Primer3: not found at this Tm | N.d. | 0.03 |
| mm4_intergenic_Zfp266|Gm26733_chr9_20530018_R | Primer3: not found at this Tm | N.d. | 0.03 |
| mm3_intron_Sulf2_chr2_166109061_F | TCGTCGGCAGCGTCGATGCCTGGATCTGAGAGCC | 59.9 | 0.03 |
| mm3_intron_Sulf2_chr2_166109061_R | GTCTCGTGGGCTCGGGGACTTCTGTTCCAGCCTCC | 60.0 | 0.03 |
| mm4_intergenic_Muc6|Muc2_chr7_141688102_F | Primer3: not found at this Tm | N.d. | 0.03 |
| mm4_intergenic_Muc6|Muc2_chr7_141688102_R | Primer3: not found at this Tm | N.d. | 0.03 |
| mm4_intron_Zfp521_chr18_13776921_F | Primer3: not found at this Tm | N.d. | 0.03 |
| mm4_intron_Zfp521_chr18_13776921_R | Primer3: not found at this Tm | N.d. | 0.03 |
| mm4_intron_Lcn8_chr2_25653832_F | TCGTCGGCAGCGTCTGCCACTGCAGGAGATCATG | 60.1 | 0.03 |
| mm4_intron_Lcn8_chr2_25653832_R | GTCTCGTGGGCTCGGAGACCTTTCCAGCAAGGGTG | 59.8 | 0.03 |
| mm3_intron_Synpo_chr18_60651796_F | TCGTCGGCAGCGTCTTTGGATGGGAACTGGCTGG | 60.2 | 0.03 |
| mm3_intron_Synpo_chr18_60651796_R | GTCTCGTGGGCTCGGCACAGCCTCCACTTCCTGAC | 60.3 | 0.03 |
| mm4_exon_Cdk5rap2_chr4_70220880_F | TCGTCGGCAGCGTCGAACTCCCAGAGGTTCAGCC | 60.0 | 0.03 |
| mm4_exon_Cdk5rap2_chr4_70220880_R | GTCTCGTGGGCTCGGCCTTACCTGGCACATGCGTA | 60.1 | 0.03 |
| mm4_intergenic_S100a7a|S100a8_chr3_90668266_F | TCGTCGGCAGCGTCACTTGACCCCTCACCATCCT | 60.1 | 0.03 |
| mm4_intergenic_S100a7a|S100a8_chr3_90668266_R | GTCTCGTGGGCTCGGCCCTCAGCTGCCACTAAGTC | 60.1 | 0.03 |
| mm3_intergenic_Spert|4930564B18Rik_chr14_75619141_F | TCGTCGGCAGCGTCCCTAGCTGTGCTAACACCCC | 60.1 | 0.02 |
| mm3_intergenic_Spert|4930564B18Rik_chr14_75619141_R | GTCTCGTGGGCTCGGAAGGCCCTAAGAGACACCCT | 59.8 | 0.02 |
| mm4_intergenic_Gm6634|Gm8604_chr3_71659459_F | Primer3: not found at this Tm | N.d. | 0.02 |
| mm4_intergenic_Gm6634|Gm8604_chr3_71659459_R | Primer3: not found at this Tm | N.d. | 0.02 |
| mm4_intergenic_Vps18|Gm14207_chr2_119300117_F | Primer3: not found at this Tm | N.d. | 0.02 |
| mm4_intergenic_Vps18|Gm14207_chr2_119300117_R | Primer3: not found at this Tm | N.d. | 0.02 |
| mm3_intergenic_Kcnj1|Fli1_chr9_32417666_F | TCGTCGGCAGCGTCCCTCTCAGAAGTGGCCATCC | 59.8 | 0.02 |
| mm3_intergenic_Kcnj1|Fli1_chr9_32417666_R | GTCTCGTGGGCTCGGACTGCACGCCTTTAGCCATA | 59.7 | 0.02 |
| mm4_intergenic_Rpl8|Zfp647_chr15_76906677_F | TCGTCGGCAGCGTCCCCATTCCTTCTCAACGTGC | 59.1 | 0.02 |
| mm4_intergenic_Rpl8|Zfp647_chr15_76906677_R | GTCTCGTGGGCTCGGAGAAGTTTCTACACTCACACACT | 57.4 | 0.02 |
| mm4_intergenic_Gm26894|9530036O11Rik_chr5_28500913_F | TCGTCGGCAGCGTCCCTGAGAAGGCAGTGGGAAG | 60.0 | 0.02 |
| mm4_intergenic_Gm26894|9530036O11Rik_chr5_28500913_R | GTCTCGTGGGCTCGGGCACAGCTAACCCCTGTCTT | 59.9 | 0.02 |
| mm3_intergenic_A730056A06Rik|A730056A06Rik/Rgma_chr7_73351895_F | TCGTCGGCAGCGTCCATGGTGGTTACCCTGGGAC | 60.0 | 0.02 |
| mm3_intergenic_A730056A06Rik|A730056A06Rik/Rgma_chr7_73351895_R | GTCTCGTGGGCTCGGTGTATCCTCCGTTGGCCAAC | 60.0 | 0.02 |
| mm4_intron_Skint5_chr4_113883592_F | Primer3: not found at this Tm | N.d. | 0.02 |
| mm4_intron_Skint5_chr4_113883592_R | Primer3: not found at this Tm | N.d. | 0.02 |
| mm4_intron_Snrk_chr9_122119835_F | Primer3: not found at this Tm | N.d. | 0.02 |
| mm4_intron_Snrk_chr9_122119835_R | Primer3: not found at this Tm | N.d. | 0.02 |
| mm4_intergenic_Gm9049|Ifng_chr10_118357741_F | Primer3: not found at this Tm | N.d. | 0.02 |
| mm4_intergenic_Gm9049|Ifng_chr10_118357741_R | Primer3: not found at this Tm | N.d. | 0.02 |
| mm4_intergenic_Mbl2|Gm24108_chr19_30260723_F | Primer3: not found at this Tm | N.d. | 0.02 |
| mm4_intergenic_Mbl2|Gm24108_chr19_30260723_R | Primer3: not found at this Tm | N.d. | 0.02 |
| mm3_intergenic_Gm16013|9230020A06Rik_chr11_71456961_F | TCGTCGGCAGCGTCCACAGAGTCCCCATGCTGAA | 59.6 | 0.02 |
| mm3_intergenic_Gm16013|9230020A06Rik_chr11_71456961_R | GTCTCGTGGGCTCGGGAGAAAGGACTGGCCATCCC | 60.1 | 0.02 |
| mm4_intergenic_Gm25056|Gipc2_chr3_152047668_F | TCGTCGGCAGCGTCTGAAGGCTGTCACTCACGTG | 60.2 | 0.02 |
| mm4_intergenic_Gm25056|Gipc2_chr3_152047668_R | GTCTCGTGGGCTCGGGGAAGTGGGATTGCTCTGGA | 59.3 | 0.02 |
| mm3_intron_Asap2_chr12_21222044_F | Primer3: not found at this Tm | N.d. | 0.02 |
| mm3_intron_Asap2_chr12_21222044_R | Primer3: not found at this Tm | N.d. | 0.02 |
| mm4_intron_Loxhd1_chr18_77410389_F | TCGTCGGCAGCGTCAACTCAGTCTTTCAAGATCCCA | 57.0 | 0.02 |
| mm4_intron_Loxhd1_chr18_77410389_R | GTCTCGTGGGCTCGGCCTGGCCATACATCAGGCAT | 59.8 | 0.02 |
| mm3_exon_9130213A22Rik/Hes7_chr11_69121382_F | TCGTCGGCAGCGTCAGTAGCAGGGAGTGAGAGGG | 60.0 | 0.02 |
| mm3_exon_9130213A22Rik/Hes7_chr11_69121382_R | GTCTCGTGGGCTCGGGATCCTGCCGCTGGGAAAA | 60.3 | 0.02 |
| mm4_intergenic_Mir200a|Mir200b_chr4_156055629_F | Primer3: not found at this Tm | N.d. | 0.02 |
| mm4_intergenic_Mir200a|Mir200b_chr4_156055629_R | Primer3: not found at this Tm | N.d. | 0.02 |
| mm4_exon_Vamp2_chr11_69090078_F | TCGTCGGCAGCGTCCCTGGGGAGGTAGAGGCTTT | 60.6 | 0.02 |
| mm4_exon_Vamp2_chr11_69090078_R | GTCTCGTGGGCTCGGGCCAATAGCAGCAAAGTGTGT | 59.7 | 0.02 |
| mm4_intergenic_Igfl3|Mill1_chr7_18227822_F | Primer3: not found at this Tm | N.d. | 0.02 |
| mm4_intergenic_Igfl3|Mill1_chr7_18227822_R | Primer3: not found at this Tm | N.d. | 0.02 |
| mm4_intergenic_Gm4487|Gm24073_chr14_113890257_F | Primer3: not found at this Tm | N.d. | 0.02 |
| mm4_intergenic_Gm4487|Gm24073_chr14_113890257_R | Primer3: not found at this Tm | N.d. | 0.02 |
| mm4_intron_Frmd5_chr2_121549600_F | Primer3: not found at this Tm | N.d. | 0.02 |
| mm4_intron_Frmd5_chr2_121549600_R | Primer3: not found at this Tm | N.d. | 0.02 |
| mm4_intron_Ppp1ca_chr19_4192420_F | Primer3: not found at this Tm | N.d. | 0.02 |
| mm4_intron_Ppp1ca_chr19_4192420_R | Primer3: not found at this Tm | N.d. | 0.02 |
| mm4_intergenic_Dscaml1|Gm22069_chr9_45615327_F | TCGTCGGCAGCGTCGGCCTCCTTCTTCACACAGG | 60.3 | 0.02 |
| mm4_intergenic_Dscaml1|Gm22069_chr9_45615327_R | GTCTCGTGGGCTCGGCAGTAGATGGCTAGCGCTCC | 60.0 | 0.02 |
| mm4_intergenic_Gm11581|Ctla4_chr1_60883930_F | TCGTCGGCAGCGTCAAAGGCTGTCAGTGATGGGG | 59.9 | 0.02 |
| mm4_intergenic_Gm11581|Ctla4_chr1_60883930_R | GTCTCGTGGGCTCGGTGCGTGGAAGTTCTTCAGCT | 59.8 | 0.02 |
| mm4_intergenic_Sv2c|Gm25213_chr13_96208924_F | Primer3: not found at this Tm | N.d. | 0.01 |
| mm4_intergenic_Sv2c|Gm25213_chr13_96208924_R | Primer3: not found at this Tm | N.d. | 0.01 |
| mm4_intergenic_Angptl7|Mtor_chr4_148509283_F | TCGTCGGCAGCGTCTGCATTGCCCCTGAAGGTAG | 60.0 | 0.01 |
| mm4_intergenic_Angptl7|Mtor_chr4_148509283_R | GTCTCGTGGGCTCGGCTACAGGACCCAGACCTTGC | 59.7 | 0.01 |
| mm4_intron_Crtc1_chr8_70413957_F | TCGTCGGCAGCGTCCCTGGAGGCTCCTTTCTGTC | 59.7 | 0.01 |
| mm4_intron_Crtc1_chr8_70413957_R | GTCTCGTGGGCTCGGCATGGACTGAGGCCAAGACA | 59.6 | 0.01 |
| mm4_intergenic_Samd4|Gm10371_chr14_47097518_F | TCGTCGGCAGCGTCTGCCCGTAAAACACACCAGT | 60.1 | 0.01 |
| mm4_intergenic_Samd4|Gm10371_chr14_47097518_R | GTCTCGTGGGCTCGGTGCAGGGGAAGGTCAGTTTC | 59.8 | 0.01 |
| mm4_intron_Slc24a4_chr12_102221046_F | TCGTCGGCAGCGTCCCAGTGGGGAGAAGATGCTG | 60.1 | 0.01 |
| mm4_intron_Slc24a4_chr12_102221046_R | GTCTCGTGGGCTCGGCATGTTCTGGCCTTGGAGGT | 59.9 | 0.01 |
| mm4_intergenic_Tdrd3|Rps3a2_chr14_87699452_F | Primer3: not found at this Tm | N.d. | 0.01 |
| mm4_intergenic_Tdrd3|Rps3a2_chr14_87699452_R | Primer3: not found at this Tm | N.d. | 0.01 |
| mm4_intron_Eefsec_chr6_88370643_F | Primer3: not found at this Tm | N.d. | 0.01 |
| mm4_intron_Eefsec_chr6_88370643_R | Primer3: not found at this Tm | N.d. | 0.01 |
| mm4_intron_Unc5a_chr13_55002761_F | TCGTCGGCAGCGTCCGCACTTAAGCTCACCCTGA | 60.0 | 0.01 |
| mm4_intron_Unc5a_chr13_55002761_R | GTCTCGTGGGCTCGGGGAAACATGGGTGGAGAGGG | 60.0 | 0.01 |
| mm4_intergenic_Zbtb38/E030011O05Rik|Acpl2_chr9_96814274_F | Primer3: not found at this Tm | N.d. | 0.01 |
| mm4_intergenic_Zbtb38/E030011O05Rik|Acpl2_chr9_96814274_R | Primer3: not found at this Tm | N.d. | 0.01 |
| mm4_exon_RP24-225O12.5_chr14_69158685_F | Primer3: not found at this Tm | N.d. | 0.01 |
| mm4_exon_RP24-225O12.5_chr14_69158685_R | Primer3: not found at this Tm | N.d. | 0.01 |
| mm4_intergenic_Gm22777|Spock1_chr13_56948472_F | Primer3: not found at this Tm | N.d. | 0.01 |
| mm4_intergenic_Gm22777|Spock1_chr13_56948472_R | Primer3: not found at this Tm | N.d. | 0.01 |
| mm4_intron_Frmpd4_chrX_167857671_F | Primer3: not found at this Tm | N.d. | 0.01 |
| mm4_intron_Frmpd4_chrX_167857671_R | Primer3: not found at this Tm | N.d. | 0.01 |
| mm4_intergenic_Gm22063|Cbfb_chr8_105173985_F | Primer3: not found at this Tm | N.d. | 0.01 |
| mm4_intergenic_Gm22063|Cbfb_chr8_105173985_R | Primer3: not found at this Tm | N.d. | 0.01 |
| mm4_intron_Mkx_chr18_6956778_F | TCGTCGGCAGCGTCGCTGGAGTCAGACTGGGAAC | 60.0 | 0.01 |
| mm4_intron_Mkx_chr18_6956778_R | GTCTCGTGGGCTCGGCTCTCAAGGCAGGGTCTTGA | 59.0 | 0.01 |
| mm4_intron_Tspan18_chr2_93331052_F | Primer3: not found at this Tm | N.d. | 0.01 |
| mm4_intron_Tspan18_chr2_93331052_R | Primer3: not found at this Tm | N.d. | 0.01 |
| mm4_exon_A330009N23Rik_chr15_101221420_F | TCGTCGGCAGCGTCGATTGGTGGGAGACTTGGCA | 59.9 | 0.01 |
| mm4_exon_A330009N23Rik_chr15_101221420_R | GTCTCGTGGGCTCGGGATGGGGTTTAAGGGTGGGG | 60.0 | 0.01 |
| mm4_intron_Ywhag_chr5_135923252_F | Primer3: not found at this Tm | N.d. | 0.01 |
| mm4_intron_Ywhag_chr5_135923252_R | Primer3: not found at this Tm | N.d. | 0.01 |
| mm4_exon_9130213A22Rik/Hes7_chr11_69122818_F | TCGTCGGCAGCGTCCCCCGCTTCACCAATCCTT | 60.0 | 0.01 |
| mm4_exon_9130213A22Rik/Hes7_chr11_69122818_R | GTCTCGTGGGCTCGGCGAGAGGAGCAGTGGGATG | 59.5 | 0.01 |
| mm4_intergenic_Tpk1|Gm22939_chr6_43850895_F | Primer3: not found at this Tm | N.d. | 0.01 |
| mm4_intergenic_Tpk1|Gm22939_chr6_43850895_R | Primer3: not found at this Tm | N.d. | 0.01 |
| mm4_intergenic_Nmur2|Gm12239_chr11_56052504_F | Primer3: not found at this Tm | N.d. | 0.01 |
| mm4_intergenic_Nmur2|Gm12239_chr11_56052504_R | Primer3: not found at this Tm | N.d. | 0.01 |
| mm4_intergenic_Gm24638|Gm5161_chr9_101407055_F | TCGTCGGCAGCGTCAGATGGGTCAAGGTGGGAGA | 59.8 | 0.01 |
| mm4_intergenic_Gm24638|Gm5161_chr9_101407055_R | GTCTCGTGGGCTCGGCAGCATGCTGTCCTGGACTA | 59.4 | 0.01 |
| mm2_exon_Cerk/Gm15569_chr15_86185881_F | TCGTCGGCAGCGTCGAAGCTAGACTTGGGGCCAG | 60.1 | 0.01 |
| mm2_exon_Cerk/Gm15569_chr15_86185881_R | GTCTCGTGGGCTCGGTCCCTCCCGTTCCTTCCTAG | 60.0 | 0.01 |
| mm4_intron_Ano7_chr1_93398079_F | Primer3: not found at this Tm | N.d. | 0.00 |
| mm4_intron_Ano7_chr1_93398079_R | Primer3: not found at this Tm | N.d. | 0.00 |
| mm4_intergenic_Gorab|Mettl11b_chr1_163575050_F | TCGTCGGCAGCGTCCCACATGTGCAGGCAAGATG | 59.8 | 0.00 |
| mm4_intergenic_Gorab|Mettl11b_chr1_163575050_R | GTCTCGTGGGCTCGGTGCGCCAAGAAGTAAAGGGT | 59.8 | 0.00 |
| mm4_intergenic_Gm25258|Hao1_chr2_134065885_F | Primer3: not found at this Tm | N.d. | 0.00 |
| mm4_intergenic_Gm25258|Hao1_chr2_134065885_R | Primer3: not found at this Tm | N.d. | 0.00 |
| mm4_intron_Rtn1_chr12_72384645_F | Primer3: not found at this Tm | N.d. | 0.00 |
| mm4_intron_Rtn1_chr12_72384645_R | Primer3: not found at this Tm | N.d. | 0.00 |
| mm4_intron_Nsl1_chr1_191082064_F | TCGTCGGCAGCGTCGCCACGTCTTCTGAGTCTGA | 59.4 | 0.00 |
| mm4_intron_Nsl1_chr1_191082064_R | GTCTCGTGGGCTCGGCACACTGCATTTTAATCCTTCAGGT | 60.0 | 0.00 |
| mm2_intron_Trp63_chr16_25832452_F | Primer3: not found at this Tm | N.d. | 0.00 |
| mm2_intron_Trp63_chr16_25832452_R | Primer3: not found at this Tm | N.d. | 0.00 |
| mm4_exon_Dmpk_chr7_19091589_F | TCGTCGGCAGCGTCTCTGAAGCACTGTGGAGCTG | 59.9 | 0.00 |
| mm4_exon_Dmpk_chr7_19091589_R | GTCTCGTGGGCTCGGAGCTGGATCAGTCCCGTACT | 60.0 | 0.00 |
| mm4_intergenic_Gm17028|Lrriq1_chr10_103039966_F | Primer3: not found at this Tm | N.d. | 0.00 |
| mm4_intergenic_Gm17028|Lrriq1_chr10_103039966_R | Primer3: not found at this Tm | N.d. | 0.00 |
| mm4_intergenic_Gm11042|Kcnh5_chr12_74316654_F | TCGTCGGCAGCGTCCCTGCCACTTAGACACAGGG | 60.0 | 0.00 |
| mm4_intergenic_Gm11042|Kcnh5_chr12_74316654_R | GTCTCGTGGGCTCGGAGCAAAGCCTGGAGTGACAA | 59.8 | 0.00 |
| mm4_intron_Itga3_chr11_95046402_F | TCGTCGGCAGCGTCCAAGGCAAGAGGAGCAGACA | 59.9 | 0.00 |
| mm4_intron_Itga3_chr11_95046402_R | GTCTCGTGGGCTCGGGCTGACCGACGACTACTGAG | 59.9 | 0.00 |
| mm4_intergenic_Gm6369|Armc1_chr3_18868959_F | Primer3: not found at this Tm | N.d. | 0.00 |
| mm4_intergenic_Gm6369|Armc1_chr3_18868959_R | Primer3: not found at this Tm | N.d. | 0.00 |
| mm4_intergenic_Gm26688|Gm6245_chr13_40766713_F | Primer3: not found at this Tm | N.d. | 0.00 |
| mm4_intergenic_Gm26688|Gm6245_chr13_40766713_R | Primer3: not found at this Tm | N.d. | 0.00 |
| mm4_intergenic_Aplp2|Gm7244_chr9_31234532_F | Primer3: not found at this Tm | N.d. | 0.00 |
| mm4_intergenic_Aplp2|Gm7244_chr9_31234532_R | Primer3: not found at this Tm | N.d. | 0.00 |
| mm4_intron_Cux2_chr5_121988758_F | TCGTCGGCAGCGTCTCACACAAGCATGTTTCAGCC | 59.6 | 0.00 |
| mm4_intron_Cux2_chr5_121988758_R | GTCTCGTGGGCTCGGCGAGGGAGAGGGCCAGATTA | 60.4 | 0.00 |
| mm4_exon_Uggt2_chr14_119041502_F | Primer3: not found at this Tm | N.d. | 0.00 |
| mm4_exon_Uggt2_chr14_119041502_R | Primer3: not found at this Tm | N.d. | 0.00 |
| mm4_exon_Dad1_chr14_54239666_F | Primer3: not found at this Tm | N.d. | 0.00 |
| mm4_exon_Dad1_chr14_54239666_R | Primer3: not found at this Tm | N.d. | 0.00 |
| mm4_intergenic_Gm8793|Nkain2_chr10_32118853_F | Primer3: not found at this Tm | N.d. | 0.00 |
| mm4_intergenic_Gm8793|Nkain2_chr10_32118853_R | Primer3: not found at this Tm | N.d. | 0.00 |
| mm4_intron_Fut2_chr7_45665576_F | Primer3: not found at this Tm | N.d. | 0.00 |
| mm4_intron_Fut2_chr7_45665576_R | Primer3: not found at this Tm | N.d. | 0.00 |
| mm4_intergenic_Gm7091|Vsig1_chrX_140841349_F | Primer3: not found at this Tm | N.d. | 0.00 |
| mm4_intergenic_Gm7091|Vsig1_chrX_140841349_R | Primer3: not found at this Tm | N.d. | 0.00 |
| mm4_intergenic_Inpp4a|4930439A04Rik_chr1_37301624_F | TCGTCGGCAGCGTCCCTTTCAGAATCTGCTTAGGCC | 59.0 | 0.00 |
| mm4_intergenic_Inpp4a|4930439A04Rik_chr1_37301624_R | GTCTCGTGGGCTCGGCCTTAAGGTGATTTTAGCCAACCA | 59.2 | 0.00 |
| mm4_intergenic_Gm25722|Gm10051_chr5_132804881_F | Primer3: not found at this Tm | N.d. | 0.00 |
| mm4_intergenic_Gm25722|Gm10051_chr5_132804881_R | Primer3: not found at this Tm | N.d. | 0.00 |
| mm4_intron_Ankhd1_chr18_36639065_F | Primer3: not found at this Tm | N.d. | 0.00 |
| mm4_intron_Ankhd1_chr18_36639065_R | Primer3: not found at this Tm | N.d. | 0.00 |
These only list off-targets that have primers in the table above. Primers underlined, off-targets in bold.
| ontarget_mm0_exon_5730457N03Rik/Evx1_chr6_52313776 |
CCTTGTCGCCTTAGCTCCTCTTCTCAGCCAAGATCCCAGGGAGCCTGGGATTAGGAGCTTACTTGGGGGTTTTCCCCCTC CCCCCCTCTGGAGAGTCCGGGGATGGAGAGCCGAAAGGAC |
| mm3_intron_Spsb1_chr4_149923422 |
CACCATAACACCCGGAGACCCTCTTAAATATTCCCCTAACCTCAGGCTCCCTCGGACCTGCGGCTCCTTCGCTACCCTGG AGCCGTGTTTTTCTCTGACCACAGTAGTCAGCCTACATCGGCTTCAGGGGAAAG |
| mm3_intron_Nfam1_chr15_83032532 |
TGAATCCAGACCTCCCAGCTTCCAAGGGAGCCTGGAACTAGGATAGGACAGCAGTGTTGGCCCTGGGGAGATTCGCTGGT CATAAAATCCTTGGCCTCTGACTGC |
| mm4_intron_Zfp710_chr7_80086883 |
GGACCTACGTGGGCTCACTAAAACAATAATAAAACAATAACTTCTACACGTTGAGTGCTGTGTAACTCATGTGACCCTCC CAGGGAGCCTGGGATTATTCCTATAGTGGAAACCACGGGGCAGAGAGATGAGGCAAC |
| mm4_intergenic_Gm23067|Gm26072_chr5_70258504 |
ACTCTCTACTCTGATGGCGCTAGAAACTGTTTTTCTAATGGATAGGCAAGCAGTGGCTAACATCTAGTCCTAGGAGTGAC CCCCAGGGAGTCTGAAATTAGGTGAGGTCACATATATGAGGACAAGTGAGAAGCTAGGTG |
| mm4_intron_Hs6st3_chr14_119277395 |
GGCTTCTGGGCTGTGTAACTGCTATTTTCCCCTGTGTTAGTGATGGTCCCAGGGTGCCTGGTCTTAGGACATTGTACCAC CCCTAAGCTTTCC |
| mm4_intergenic_Gm13621|Il21_chr3_37202750 |
TGGCAAAACTCAATCTATCTGCCTAATGGCTTCATTCTACTGATATCAGGCTCCCTTGGGAACTCACAGTAGAGCTGGGC TGAAGGGACCCAGGACACAGCCCCAGAGCAAGAGCCATATGAGCAGGGAGGA |
| mm4_intergenic_Tbc1d19|Stim2_chr5_53906468 |
TCCACAAAGGCTCTGAGCTCTACTCATAGTTTGTCTCTTAACCCCAAGCTCTCTGGGTTGGTCAAGCAGTCACATGTGCC A |
| mm4_intron_Ulk4_chr9_121149483 |
CACCTCCTCCCAACACTGTCAGTTCCCAGCAAGGTCTCCCTGGCCAAGGGAGCCTGACTTTAGGACAATCCCTTCAGGCA TCCTTTCCTAACCATCTTCCCCCAGACAGAGGATGCCTGCTCAGCTCTAG |
| mm4_intron_Camk2g_chr14_20768720 |
GTGTGAAGTGTCCCAGCAGAGCCAGGCCAAGCCCACTGGTACAGTCCTCCCACCCCCAAGCTCCCTGGGCTATCGCTGCC TCCTCCCACCCACAGCCTGGTCCTCCCCTGCTGGCACTGGAATTCA |
| mm3_exon_1700111E14Rik_chr6_36938709 |
AACATCCATCACCCTGCTGGTCCAAGGGAGCCTGGGAGTATGAATACGCTCACACCAAGGATAAGGCTTTCTATTGTCTC CTCCCAATGCATGG |
| mm4_intergenic_Gm14619|Sh2d1a_chrX_42494686 |
GGAGGAGGTGAGGAGGTAGGATGCTAGCCTGGTACTCCTACTACCAAGGGAGCCTGAGATCAGCATGAGCTTTGCCATGC TGACAGACACCACAGGTAGCCAG |
| mm3_intron_Helz_chr11_107682167 |
GGGGAATGGAGGGAAAGGAGTCCTTCTGCTGACTGCTAATCACAGACTCCCTAGGTGTCCCGCTCTAGGAGTGAGGGGCA GGTGCAAAGCTGGAACCTT |
| mm4_intergenic_Gm25684|Gm9966_chr7_95498283 |
CTCCTTCTCCACACAGCCACCCTCTGTCCAGAGGAGGATCCTACACAGATGTCTCCATTCACACCCAACACATGGTGCTC CTGGGTCCAGGCTCCCTAGGAGAGGACCCTGGAAAGAAGGAACTCAGGCAACCTCG |
| mm4_intergenic_Gm16205|Sgcz_chr8_37916668 |
AGTGGGTGGCTTCTGTCATGGGAGGGGCAGGCTCAGCTTTGCCGCTGATCACAGGCTCCCTTGGTTTCCTTGCCTTAAAA GCAGTCTCTACACAAAACCACCACCTGAGGACTTCT |
| mm4_intergenic_Wdr43|Fam179a_chr17_71666669 |
TGCCATCCTCACTCACTGTCTCTTTCCAAGGGAGCCTGGGCTGAGGGCCTTATCCCCTGGGGACCAGCAGCTCAGAAAGG AACCC |
| mm4_intergenic_Epha8|Zbtb40_chr4_136969985 |
GGGAGGATAGTGATGGGGCTGGGGCTGGGGGTTGGCAGAGGTCAGGTGGGGGGCGCTGACTGGCTCATTCAGCTGCCAGG ACCTTATCCCAGGCTCCATGGGGGGTCCGCATGAGGCCTCTGGTTTGGT |
| mm4_intergenic_Gm24376|Gm19980_chr4_44481581 |
TGGGTTCTCAAAGGGACAGCCTTCAAGAGGCATGGACAATGCTAACCCCAGGCTACCTTGGTCCCAGTTATTGTGCCCCT GGTGTGAC |
| mm4_intergenic_RP24-86O15.2|Gm10698_chr9_33266403 |
TAGGGACCCACCACTCTGTTGTCCATGGGAGCCTGAGTTTTGGAGGAGGTAATCCCCAGGGATGGGATTCTGTCACTGCT GAAGATCCCTGGAGGA |
| mm4_intergenic_Tmem200c|Epb4.1l3_chr17_69075556 |
GTGTGCACTTGTGTGTCTGGGTATGTGGATCCCTCCTTGCAAAGACTGCTGGCTAGCAAGCCCCAAGGAAGCCTGGCATT AAGACTTTGCGAGCGCTCCCTGTTCCAAGGCCGAAGTA |
| mm3_intron_Bmp7_chr2_172881531 |
CGTGCACAGGTTCCCCTAATTAAGAGGTGGGACAGGAAAAAGAACTCCAAGAAAGCCTGGGATTAGAAGCCAGAGTTAGA AGGTACAGAAAAGAGCGCCC |
| mm3_intergenic_Gm10258|Mecom_chr3_30297017 | TCTCTTCAGCACAGTCATCTCACCAAGGGAGACTGGGATCGGGAGAAAAATGGGAGGCCATCATCGTCATC |
| mm3_intergenic_Polr1d|Gsx1_chr5_147123663 |
AAGGAACAGGTCTCGTGAGGCCACCCAGGGAGCCTGGGAGTATCAGTGGTTTGGAACCCCTGACCTCCAAGCCTGGGCAT CTACCATCTC |
| mm4_intergenic_Clstn2|4921534H16Rik_chr9_97980374 |
GCCTTTCCCAGTGAGCTCATGGCCTATAGATGTTTGTTCTAAGTCTCCCCATCTCACGCTCCCTGGGTCTCACCAGAGCA ACTGCACAT |
| mm4_intron_Zfp536_chr7_37647061 |
CTCTTTCCTCTCACTGGCCGTCGTTGGCCCTTCCCAGTGCAGGCCCTTGGGAGCCTGGGAACGGGAGCTGAAACAAGAGA CTGGGAGAGGGATGCCCACATCTCAGTTACCTGTTCTCAAGGCCTGTC |
| mm4_intergenic_Fgf10|Nnt_chr13_119176812 |
AGGGCATTGTTGTCAGAGGTGGACTACATCACAAACTAATCCCCTTGGCTCCTACTCTCAACCTCCCTGGGCATCGGCCG AGGATCCTCACCTGGCTGTTC |
| mm4_intron_Bsn_chr9_108172124 | GCTACTCACACTGACCCTGGGCCCCAGGGAGCCCAGGACTAGGAAAAGGCTCCATGCCAAACAAAAGACT |
| mm4_intergenic_Runx3|Clic4_chr4_135189732 |
CATGCTGATGGTCCCTGTGTCATAGGACTGTCAACAGAGCCCTGAGCTCTCACTAGCCCTCCAGCTGCTGATACCAGGCT TCCTTGGAATCCCCAAGCCTGTGTGCTAAAGC |
| mm4_intron_Alx3_chr3_107600294 |
CCCCATCACCACATCTTCCCAGACCACAGAGCATGTGGCTCCCTAGGGCCCCCTCCCCAGCTGGAGGCTCAGCAGTCAGG CCTCTAAATGCCAGGCTCCCAGGGAGGGTGGCTGCCAGGAGGAAGGGAAGGGGAAG |
| mm4_intron_Tspan18_chr2_93278586 |
AGCTGGGCTCCCACTACTAAATGCCGCCCACAAAGAAAAGCCTGTTATTTCTCCATAAACTGATTCTTCTCCTTTTCCCA GGCCCTCTGGGGGCCGGGCCTTGCAGATCACCCCACTT |
| mm4_exon_Rgs12_chr5_35022880 |
ACACATCCTGTCACCAGCAGAAGGTGGGGCCTGTAGGACACAGATACTCCTGAACCCTTTCCTGATCCCCTAACCCCTGG CTACCTCGGTGGTGAAAGAGAGGACTGTGCCCTTGAC |
| mm4_intergenic_Gm15663|Mettl25_chr10_105667539 | TTTGGAACCCTCATCACCACCCCTGGAAGCCTGGGATTAGCATGGGCTGCCTGCGATCACCAGGCAAAAC |
| mm3_intron_Fam19a5_chr15_87728716 |
TTCCTGAGCTCTGACCCTGAGCCAGGCTATCCCTTAGTCCCAGGCTCCCTGAGTTGGTCCTCATTGTTAGATATACATAT CTGACCCCCTGTCCTTAGCCAGTTCTGCG |
| mm4_intergenic_Spock1|Klhl3_chr13_57928746 |
ACACACATCTCAGGCTGTGAAACAACCCTCCTCATTGCAGACTCCCTGGGGGATGCTGAAGAATAAATGGACGTTAATAT CTGCAGATTAAATAACACGATAGCAGACTTGATATGCTGTGACC |
| mm4_intergenic_D7Ertd443e|Dock1_chr7_134500625 |
CAGAACTCCCAGCTGGTAGCAGACTTTATTCACACTATAACTCCCCAGGGATCTTGGGTTTAGAAGCCCTGGGATAAAGG CAGCCAGGGAAGAAA |
| mm2_intergenic_Cep112|Gm11669_chr11_108815770 |
AACAAAGACGCTGATGCTGGCTCCAAATCACAGGCTCCCTAAGGGTGACAAGAGAATAAGCCTGGAAGTCCAAGTGCCCA TGA |
| mm4_intergenic_Acadsb|Hmx3_chr7_131448505 |
ATAAGTGAGGCTCCATGGCGCTTCCTTTGCCTTCTTACCAAGAGAGCCTGTGAGGAGGAGGATGCTAGGATGTGACATCA GACAGAATAGTGTTGTACCCGTGGAGGACTAGG |
| mm4_intron_Entpd1_chr19_40714872 |
CGGCGCCTGTTTATAGGGTATTAGAAACACATTGTAAAAGATAAGCTTTGTTTATAAGCCCAGGCTCCCTGAGCCAGACC CACAGGGCTGCTTAAGTTACTGTTAAAACTACGAGCACTTTAAAGGGGTGGGG |
| mm4_intergenic_Vasn/Dnaja3|Coro7_chr16_4642419 |
CCACATTCCAGAGTCAGCCCGGCTGCTTTCCCCAACCCCTCAGCCTGCTGTCCAGGCAGCAGGCCTCCCCCGCTTTTCCT CATTCCAGTCTCCCTGGGTGTGAGGAGGCTTCTTCAGGCCACCTCAGTTTGG |
| mm4_intergenic_Gm10480|5730507C01Rik_chr12_18227428 |
TGAGTTCTCTCAGAATGACAGCAGATGAGTCTGAAAGAATGCCTATGTAGCCTGGGCTTAGAAGAAGTATACTGGCTTCA CCTAGAACTATGTCATTTCCAGTCAGAGGGAATGGA |
| mm4_intron_Rasgrp3_chr17_75503516 |
AGGTCAGTCCATGGAGCCTAGGCCTAAGGAGCCTAGGACTAGGATGAGGCTCTCAAAGGATGAGGAAAACAGAAACTTAC ACCCACAAGGAGCATGAT |
| mm4_intergenic_Gm25658|Atp2b1_chr10_98703224 |
GCACACCTGCTTGTCCTCTTAAGTACAAATCTATATCAGTGACTTTATTATTCATATGCTAGTACCAAGGGAGCCTAGGA TTTGAACATAGCCAGGATTTTAACCTGAATGC |
| mm4_intergenic_Gm27028/Mir30c-2|Ogfrl1_chr1_23332887 |
TCCCCAAGCAGGTTGTCTTGTTTCTCTGCTCCAGATAAATGGGGGAAAGAACCTTTCCACAGAGAGCACTAACTGAATGA CAGATTGTCTTACAATCCGAGGGAGGCTGGCTTGAGGAGGCCTCAGAGGGGACAGCAAAT |
| mm3_intron_A530013C23Rik_chr2_167691379 |
CTGCTGTGAGGGATTCTGGGTAACGGGTAACAGAGCAGTTTGCCAAAGGCCTAAGGGAGCCTGGGATTTTTAGGGGTGAC CAGCGACTCTGGTTGGTGAA |
| mm4_intron_Rasa3_chr8_13595223 |
ACACTTGGCTTTGGTCTCCTGAGACTGAGGGAATCTCTAAGGGAACCAAATGCCATCCAGATCCGAGGCTCCCTGGGCTG GGCCAGGACAGCACCCGAGACACAGTCATGT |
| mm4_intergenic_Gm5976|Tmem194b_chr1_52600157 |
GGGTGCTGTAGGCTTGCATACAATTGAGCTGGTGAGTGGCCTCTGCCTGCTAGTCCCAGCCTCCCAAGGTATTCTGGCCC AGCAGCAGAAACTACT |
| mm4_intergenic_Gm7052|Zfp943_chr17_22050735 |
CCAGCCTGGGAGAACACAATTGTATCAGGGATTACCAGGGATCCTAGGGAGGGTGGGATACGGAGATGATGCATGCTGGG ATGGTT |
| mm2_intron_Myom3_chr4_135795225 |
GGACAAGCCAGGTAGGATGGCCAGGAAGGACCAGGCTGCACTGAGGGAGCCTGGGAACAGGAGGAGCTCAGGAGGAAGAT GGGAAAGCCTGAGGGTACAG |
| mm4_intergenic_Sp7|Gm23590_chr15_102370868 |
CTACCTCCACTCTCACAGGCCTCCTCAGCCCAGCCTCCCAGGGGGTGGGGCAGCCCAGGCAGAGGCGCCATGTGGCAGGG GCGGGTAGAGGCTGCGGCTCTGGCCCTTCCAGTATAAACCCC |
| mm4_intron_Wscd2_chr5_113578089 |
ACAGCAGTCAAGCTAGCCAGCTCTCATCTTCCCAGGCTTCCTGGGGACTGAGAGAAGGGGAGGAGGGGTTATCAACTGGT CTCTGAGCAACCCCTCTCTCTGT |
| mm4_intron_St6galnac1_chr11_116772805 |
TCTGGGAGTGTGCATTCCACTTCTTGCCTCCTGGTGAAGGAGGTGCTAAGCTCCTGTTCCCCAGCTCCCTAGGCCATGAA GACCTGGGATAGAACAGCACGG |
| mm4_intron_Gm11735_chr11_116749065 |
CGTTCCACTTCTTGCCTCCTGGTGAAGGAGGTGCTAAGCTCCTGTTCCCCAGCTCCCTAGGCCATGAAGACCTGGGATAG AACAGCACGGCTCTGTTT |
| mm4_intergenic_Cd164l2|Map3k6_chr4_133226396 |
ACGGCACCTTGGTTAGATGTGGAAAGGCACAGAGCAGGTGGCAGGCTTCCAGGAACGCAGCGATCTCTGCCTTCGAATCC CATGCTCCCAAGGGGGCCTCCGGCTGCTACTTGGCCTCGGGGTTAATCTGCTGCCCACT |
| mm4_intergenic_A630031M04Rik|1700112K13Rik_chr4_127720800 |
GGATGGGTGGCTTTGGATCATATGTATTTCATAGGCTAATGTGAACACCCAGGGATCCTTTGATTTGGAGATGTTTATAG AGCACAGGGGTAATTAGCATCAGGAGTACATAGCAACACATCTTTGCAGACAC |
| mm4_intergenic_mmu-mir-6393|Zdhhc25_chr15_88488224 |
TGCTGGAATGGCCTACCCTAAAGGGCATCCTGCAAGCCAACTGCTCGTTCAGGTTCCTAGAAGGCCCAAGAAGCCTTGGA GTAGGAGAGGTTGGTCCAGTGCCACCTGGGAAAGTCCACTG |
| mm4_intron_Arhgap18_chr10_26835187 |
GCCAGGTTCCAGCTCAGAAAAGGAAAGTTTCAGGCAAACCCAGGGAGACTGGGAGAATGAGACCTAGGGAGGGAGGGGTT CCAGGAAGGTGT |
| mm3_intron_Hvcn1_chr5_122239236 |
TCACCTAGAGCTGTCCCCTCCGTTCTGCTGCAGAGGGCTCAGGGGGCCTAGATGCTGAGACAGGCTTAGGGAGCCTGGGA TGAGAGGGTGGCAGTGGGGCCTTTGTTTGGGGTGGGTGTGT |
| mm4_intergenic_Rps15a-ps6|Gm11969_chr11_6180317 |
TCCTCAGGAAACAGCAACCAGAAGCTGCACTGGCGGGAGGGCCCCAAGGGGCCCAGGATTAGGAGACTGAAGTGTCCTCA GTGAATTTGGCAGTGGTCTTAGACGCAGCTTCGGT |
| mm4_intergenic_Gm13358|Egfl7_chr2_26578103 |
CGGGTGGACTGTGTGAACAAGCTCTTGGTAAGCTGTTAGACTCCACAGAGGAAGATATCTGCTGAGCCCCAGCCTGGACC TCCATGGGCTTCTCTTCCCAGGCTTCCTAGGGCTCTGAGCCAGTGTTACAAGGAGCC |
| mm3_intergenic_Evx2|Hoxd13_chr2_74665452 | TCAGCAGTCTGGCTCAACAGCAGTGACTTCCCTGGGATCCTGGGATTTGGAGTTCTACCTGTGGGCCCTTTCAG |
| mm4_exon_E2f2_chr4_136194340 |
TCCAGAGAGGTGTACCCAGGGGTGACGGGGTCTGAGAGGCCTTCCACCTACCCTCAGGGAGCCTGGGTTTCTCAGGGGCT CAGTGGGGCAGCACTTTT |
| mm4_exon_Vps11_chr9_44361444 |
CGTGCGCTGAGGAAAGAAACACCTCCGAAAGAAGGATATCTCCAAAGACCAGGCTCCCGCGGCCTGAGTCGCAGACAGTG ATGCCAGGAGG |
| mm3_intergenic_Gm8765|Gm22199_chr13_50978165 |
CCAAGCCCAGTCTCTCAGTCTCAGGAGTGGCCCAGCCTCGCCTCCCAGACTACAAATCCCAGGCTACCTTAGAAAACACC CCCACAAAGCCCCACCCAAAAAAACCCTATATACCGCCTACCTCCTGCTCATTT |
| mm4_intron_Nfasc_chr1_132610521 |
AGGTTGCTTCCTTGCCCATTCTTAAACCTCACAACAGAGCAGCAAATACAGCATACTGAGAAAGGACTGGCCCAAGGGAG CCAGGGAGCAGCAGAGTCCATGGCTGGGGACTGGGGAGCTCAAGGTAGATGC |
| mm4_intron_B230209K01Rik_chr1_121112722 |
TAAGTGTGGCAAGGGTCAGGGTTCCTGGAGAAAAATACTCATTGTGCATCCCTGCCTAGGAATCCTGGGATTTGGAAGGA GGACTCTGAGGTCATCCTCCATTACCTCACCCTTGGCCTTCTAGGA |
| mm4_intergenic_6430573F11Rik|Dlc1_chr8_36548280 |
CCTTCCCTGGCCTTGAACTTTCTATCCTAGGGCGGCTGGGATTACAAGCTTGGACTACTCACTCAGTAACCTTAGCTTTA ACCTGGCAGACACCTATTGTTCTTACAGTGCCCCGG |
| mm4_intron_Fam227a_chr15_79637200 |
GAAGTGACGAGAGCCTCTGGGAGGGGCAGAGCTCAGTGTCAACCCCAGTGTCCCTGTCCCCAGAACAGAGCCCTGGCTCT TCCCAATACCAGGCTGCCTTGGGCTGCCTCCCCACCCTGGTGTCACTGAGGATGCTCC |
| mm2_intergenic_Ccr3|Ccr2_chr9_124051334 |
AGAGGGGAGTTCAGCTCGTAAATTGGAACCCAGGCAGCCTGGGATTAAGAGGGAAATTTCTTTCTCCTCATTCACTTCCT CTTTTTCCTCTCTCTTCCGTCCTCTCTCCTGCCTCTCCAT |
| mm4_intergenic_Gjb6|Cryl1_chr14_57146128 |
TGCTTGATGCTGTTCCTTGTGTGATAGTTTCCCAGGGAGCAAGGGAATGGGAGGACATGAAAGTAGAGACTCTGAACACC TATTGTTTATAAGGCTCAGCTTCAGCTCCTGGCAAGGGGGTGAGCAGCCTGGTGGTTAG |
| mm4_exon_Lama5_chr2_180180408 |
TAGAGGCTGACCACCTCCTCATTCAGTGTTTCCATCTCAATGCAGCCCAGGTAGCCAGGGAATCGGAGGGGTTCAGGGGG CTGGGGGTAAAGTGTATGGTCAGGGCACCTTCCTACCTCCCAGAGACCAACCACAC |
| mm4_intergenic_Gm17033|4933406K04Rik_chr12_106577109 |
ACATCATTGAAGGGAGCGCTCCTGTTACAACATCTCAATGAGCGCACTGTCTTTACCCCCAGAGAGCCTAGGAGTTGGAG AGGCCCCCTTCCCCTGATGTTGCCCTT |
| mm4_intron_Rnf165_chr18_77503270 |
AGCTGTCATCAGACTGTGCCAGGGTCCAGTAGGCTTACTCACTTCGGTCTGACACTCATCATTTCCCACACTGAGCTTTG TCCCAGGGAACCTGGTCTTAGGAAGGCCCTCCAGAGTGGAAATGGGGTCC |
| mm4_intron_Phactr2_chr10_13379077 |
GCACTGTCAAACTCCACACACTTTAAGAAACACCCAGGGGAGGCTGGGGTTGGGAGGAAAGATGTTAAAAGCAGGACTGT GGGGTT |
| mm4_exon_Psmb8/Gm20496_chr17_34199021 |
CCTAGGTCTCAAGCCCCTCTACTGTAAAATGAGAGCAAGTTATTAAAATGTGCTTTCGAGAACCAAAGGAGCCACGGATT AGGAAACACCTTGAAGTCGCCTACCA |
| mm3_intergenic_Gm16286|Txnl4a_chr18_80214943 |
TGGTTGTGCAGTTGGTGTGTATAGAATGATCCTGGACAAATGAACAGAAAATGGAACACAGCTTCCACTCCTAATCCCAT GATCCCATGGCCTCAACCTCTGGCGTGAGCTCGTTTA |
| mm4_intron_Bmp6_chr13_38483583 |
TCCCTGTCACTCTACCTACTGTTTACACTTGAAAATGATGACAACAGAGCTCTCTTCTAACCCCAAGCTGCCTTGGAAGC ATGAAAAAGTGTGTTTCCCACCAACAAAATCTTAAGACCTCAGGTCGATGCTGCACTG |
| mm3_intron_Sulf2_chr2_166109061 |
GATGCCTGGATCTGAGAGCCACGAGGAGAGAGAGGCAGAGCCTGGGGAGCCTGGGATATGGAGAGCTGAGGAGGCTGGAA CAGAAGTCC |
| mm4_intron_Lcn8_chr2_25653832 |
TGCCACTGCAGGAGATCATGATCCTGGGGAGGCTGAGATTAGTAGAACCATGCTTCATTCAGTATGAAAGCTGTAAGCCT GGATGCTTGCTCCCCACACCCTTGCTGGAAAGGTCT |
| mm3_intron_Synpo_chr18_60651796 |
TTTGGATGGGAACTGGCTGGGTAACCTCCTCTTCAAAACGTCCCCGAGGAGCCTTGGATTAGGAGGGCAGAAGTGGGGGT CAGGAAGTGGAGGCTGTG |
| mm4_exon_Cdk5rap2_chr4_70220880 |
GAACTCCCAGAGGTTCAGCCCTGCAGGGCCTACTCCCAGGCTCCCCAGGTTTAGTGACCAGAGGTTCCAAAACCCCTCCC ACCCATGCCAATGAGCAATGTACTACGCATGTGCCAGGTAAGG |
| mm4_intergenic_S100a7a|S100a8_chr3_90668266 |
ACTTGACCCCTCACCATCCTAGAGTTCACTCCTCTCTTCATCCCAGGCTCCTGGGGACAAAGGTACAGTGACCATTCTGA GAGGCTGAAAGGGTCTCTACTGTTATCATGCAGTGACTTAGTGGCAGCTGAGGG |
| mm3_intergenic_Spert|4930564B18Rik_chr14_75619141 |
CCTAGCTGTGCTAACACCCCAGCTCACCAAACCCCAGGCTCCCTTGAACTGCCCTGCAGCCTGCAGCAGTACCCTTTGCT CCTCTACTCTCGTCTGTGCCAGGGTGTCTCTTAGGGCCTT |
| mm3_intergenic_Kcnj1|Fli1_chr9_32417666 |
CCTCTCAGAAGTGGCCATCCTCCCAGGGAACCTGGGATTTGTAGTATTCTAATCAGCTGACCTCTTCTAATCCTCTAGAG GGTCTATGGCTAAAGGCGTGCAGT |
| mm4_intergenic_Rpl8|Zfp647_chr15_76906677 |
CCCATTCCTTCTCAACGTGCAGTAGAAGCTAGTCTCCAACTCCTAATTACAGGCTGTCTTGGGCACTAGTGTGTGAGTGT AGAAACTTCT |
| mm4_intergenic_Gm26894|9530036O11Rik_chr5_28500913 |
CCTGAGAAGGCAGTGGGAAGATAGCATGGTTATTATAGGCAGAGGCCCCAGGGTACCTGGGATGGGGAGATCCCTATCAG AACTGAATGCACAATCAAGACAGGGGTTAGCTGTGC |
| mm3_intergenic_A730056A06Rik|A730056A06Rik/Rgma_chr7_73351895 |
CATGGTGGTTACCCTGGGACCCTGTTTCCACTGTGGTCCAGGGAGCCTGGAAATGGGAGTCCTTCAGGTTGGCCAACGGA GGATACA |
| mm3_intergenic_Gm16013|9230020A06Rik_chr11_71456961 |
CACAGAGTCCCCATGCTGAAACACAGCACTTCTGGGACATTTTAAAAGTCCTTGGAATCAAAACTGTTTTTCCTAAAGGG ATGCATCTCCAGGGAGCCTGGGACTCAGAGTGGGATGGCCAGTCCTTTCTC |
| mm4_intergenic_Gm25056|Gipc2_chr3_152047668 |
TGAAGGCTGTCACTCACGTGCCCTACCTTAAAGAGTACACATTCCTACCCTCCTGTTCCCATTCTCCCTTGGAAGGATCA GTCACTGTGGAATGATTACTTCACTGTTCTTATAAAATGCTCCAGAGCAATCCCACTTCC |
| mm4_intron_Loxhd1_chr18_77410389 |
AACTCAGTCTTTCAAGATCCCACCCAGGGAGCCAAGGATGAGCAGTTGGGGAACTGCCATTGCTGAGTAGTGAAATGCCT GATGTATGGCCAGG |
| mm3_exon_9130213A22Rik/Hes7_chr11_69121382 |
AGTAGCAGGGAGTGAGAGGGAAACGAATGGACCAGACCCAAGCAGCCTGGGATTAGGGGAAAGGGGCGCATGGGGGGTTT TCCCAGCGGCAGGATC |
| mm4_exon_Vamp2_chr11_69090078 |
CCTGGGGAGGTAGAGGCTTTCCCTGGGGAGCCTGGGCTTTGAAGGTCACTAACCTAGTTTTTACTCTGCAACCAAAACAC ACTTTGCTGCTATTGGC |
| mm4_intergenic_Dscaml1|Gm22069_chr9_45615327 |
GGCCTCCTTCTTCACACAGGACCAGGAGTAGAAAAAGGAGTCACAAACCAGGAAGAGCCCAGGGAATCTGGGTTTTGGAG ACAAGCCATAGGAACTGGAGTTAGAGAGAGTAGGAGCGCTAGCCATCTACTG |
| mm4_intergenic_Gm11581|Ctla4_chr1_60883930 |
AAAGGCTGTCAGTGATGGGGCAAATTCTTCCCAGCAAAACACTGAAGATAGGGCCCAAGGCAGCCTGAGATCAGCAGGCA AGGAGGGAGAGCAAAACACTGAGACAAACAGCTGAAGAACTTCCACGCA |
| mm4_intergenic_Angptl7|Mtor_chr4_148509283 |
TGCATTGCCCCTGAAGGTAGGGTCACAGAAGGCCAAGGAAGCGTTAAAACCTCTAAAACACAGGCTCCCTGGAGCAAGGT CTGGGTCCTGTAG |
| mm4_intron_Crtc1_chr8_70413957 |
CCTGGAGGCTCCTTTCTGTCTTGTCTATCTACAAACCCAAGGCAGCCTGGGACTTGGGGTCATGGCTCTAGCATCTACAG TCCACACTGTACCTCCTATGTCTTGGCCTCAGTCCATG |
| mm4_intergenic_Samd4|Gm10371_chr14_47097518 |
TGCCCGTAAAACACACCAGTAAGAAAACCACAGCCCAGAGTGCTGCTGCCCCTCAGCCCAGGCTGCCTGGGGAGCCTGCT GCCTCCCACTGCCTCTGAGAGTCAGCAAGGGAAACTGACCTTCCCCTGCA |
| mm4_intron_Slc24a4_chr12_102221046 |
CCAGTGGGGAGAAGATGCTGACCCAAACTTCCTGCAGCACTCCAGAGCCCAGGCTGCCTAGGGCTACCTAGATCCTCTGT CTTCCATTTTGGATCGGATAGTGGACCTCCAAGGCCAGAACATG |
| mm4_intron_Unc5a_chr13_55002761 |
CGCACTTAAGCTCACCCTGATTTGCAACTTCCGTCCTTACGGTGTCAACCACCCCACTGCAGAGTCTGTCTCCTAACCCC ACGGTCTCTAGGACTGGCCACTGACGCCTTTCCCTCTCCACCCATGTTTCC |
| mm4_intron_Mkx_chr18_6956778 |
GCTGGAGTCAGACTGGGAACTGTTAAATACCCAAGAGGACCTGGGAGTAGGAGGCAAAAGTCTAAATTATTTCTCAAGAC CCTGCCTTGAGAG |
| mm4_exon_A330009N23Rik_chr15_101221420 |
GATTGGTGGGAGACTTGGCAAGGGGTTGTCCTTAAAGAAGTGAGAAGGGGCTTTGTCCGTTAGACAGCCTCTACTAATCC CATGCTACCCAGGTCTCCCCTCCCCCCACCCTTAAACCCCATC |
| mm4_exon_9130213A22Rik/Hes7_chr11_69122818 |
CCCCGCTTCACCAATCCTTGGCCCCGCGCTGCACCAGCGCCCCCCAGTGCACCAGGGCCCTCCTAGTCCCCGCCTCGCTT GGTCCCCATCCCACTGCTCCTCTCG |
| mm4_intergenic_Gm24638|Gm5161_chr9_101407055 |
AGATGGGTCAAGGTGGGAGAAAGACCAACGACTCCTAAACCCAGGGTACCATGGTGACCCTCTATAGTCCAGGACAGCAT GCTG |
| mm2_exon_Cerk/Gm15569_chr15_86185881 |
GAAGCTAGACTTGGGGCCAGAGAAGAATCAGAAACAGAGGAGTCTAGGGAGCCTAGGATGAGGAGCAGAAAAGGCCTAGG AAGGAACGGGAGGGA |
| mm4_intergenic_Gorab|Mettl11b_chr1_163575050 |
CCACATGTGCAGGCAAGATGTGCCTCCTCCTGATCCCTGGATCCCGAGGTTCCTGCTCAGCTCTTTCCCAGCATCATGTG ACAATGAACAACACGGCTTAACCCTTTACTTCTTGGCGCA |
| mm4_intron_Nsl1_chr1_191082064 |
GCCACGTCTTCTGAGTCTGAGCTTTTAGCTAAAGTCCCTTTACTTAAAGTAGGATTTTAAAACACAGAGACAAATATCCA TAACCCTAGGGAACCAGGGCTTAGCAGTCAACTTGACCTGAAGGATTAAAATGCAGTGTG |
| mm4_exon_Dmpk_chr7_19091589 |
TCTGAAGCACTGTGGAGCTGGGAGGAACACGCTAAACTTCTGACTTCAGCCCTTCAGTTCCCCTGTTGACTACACTGTCC CCAGGGACCCAGGGATGGGGAGAGGTGGACGGGGGAGGGAAGTACGGGACTGATCCAGCT |
| mm4_intergenic_Gm11042|Kcnh5_chr12_74316654 |
CCTGCCACTTAGACACAGGGTCTCTTTGTGTCCGGCTAGTTGGCTTTGGAGCTTTCCGGAATTCTCCTACTCCCACCCTC CCCAGGCAAACATTGTCACTCCAGGCTTTGCT |
| mm4_intron_Itga3_chr11_95046402 |
CAAGGCAAGAGGAGCAGACAGGACAGAATCAGAGGCCCCAGGCAGCTGGGGATTTGGAGAGGAGATTCATAGGCCATGTT ACCCGGGTGGGCCGGGGCAGGGGGGCTGACCCCTCAGTAGTCGTCGGTCAGC |
| mm4_intron_Cux2_chr5_121988758 |
TCACACAAGCATGTTTCAGCCGTCCTAATNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNTTCTAATCTGGCCCTCTCCCTCG |
| mm4_intergenic_Inpp4a|4930439A04Rik_chr1_37301624 |
CCTTTCAGAATCTGCTTAGGCCCCCAGGCAGACTCGGTTTAGGAGATACATTGTAATAGTTTATTCCATTGTTTTGGAAA CTGGATACTTTGTAGTATTGCTGTTAAAATCAATATTGGTTGGCTAAAATCACCTTAAGG |