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Contents:In the table below, Illumina Nextera Handle sequences have been added and highlighted in bold. Primers for the on-target have been added for convenience. The table below is sorted by the CFD off-target score. Sites with very low CFD scores < 0.02 are unlikely to be cleaved, see our study Haeussler et al. 2016, Figure 2.
In the protocol by Matthew Canver, Harvard, two PCRs are run: one PCR to amplify the potential off-target, then a second PCR to extend the handles with Illumina barcodes. Please click here to download the protocol. Alternatively, you can have a look at Fu et al, 2014.
If a primer was not found, the reason is usually that the region around the off-target is too repetitive. To avoid unspecific primers, all repeats are masked for the primer design (not for off-target search). If you think that we should change the parameters here or should use different primer3 settings, please let us know.
| Name | Primer Sequence | Tm | CFD Score |
|---|---|---|---|
| ontarget_mm0_exon_5730457N03Rik/Evx1_chr6_52313758_F | TCGTCGGCAGCGTCCGCATCACAAGGTGACCCTA | 59.7 | 1.00 |
| ontarget_mm0_exon_5730457N03Rik/Evx1_chr6_52313758_R | GTCTCGTGGGCTCGGAGCTCCTAATCCCAGGCTCC | 60.7 | 1.00 |
| mm4_intron_Plce1_chr19_38763148_F | TCGTCGGCAGCGTCACTGAACAGCTTCATAGAGATCTGT | 59.5 | 0.88 |
| mm4_intron_Plce1_chr19_38763148_R | GTCTCGTGGGCTCGGTGCCGGTCTCTGTTTCCAAG | 60.2 | 0.88 |
| mm4_intron_Nkain4_chr2_180947376_F | TCGTCGGCAGCGTCTCTCGGGTCACAAAGCACTC | 59.9 | 0.76 |
| mm4_intron_Nkain4_chr2_180947376_R | GTCTCGTGGGCTCGGGCTAGCATCACGAAGGGCTA | 59.6 | 0.76 |
| mm4_intergenic_Gm5558|Rchy1_chr5_91869224_F | TCGTCGGCAGCGTCTCACCAAACACCACCACTCC | 60.1 | 0.67 |
| mm4_intergenic_Gm5558|Rchy1_chr5_91869224_R | GTCTCGTGGGCTCGGAACAAGGTCGTTCGGTGTGT | 60.1 | 0.67 |
| mm3_intron_Trem3_chr17_48257171_F | TCGTCGGCAGCGTCAGACCTGGACACAATGCTGG | 59.9 | 0.54 |
| mm3_intron_Trem3_chr17_48257171_R | GTCTCGTGGGCTCGGAGGGAGGTTCATTGGGTCCT | 60.1 | 0.54 |
| mm4_intergenic_Myb|Gm2467_chr10_21176188_F | TCGTCGGCAGCGTCGGTCAATGTCTGAGCTTTTACTCA | 59.0 | 0.53 |
| mm4_intergenic_Myb|Gm2467_chr10_21176188_R | GTCTCGTGGGCTCGGTGGGATATAGTTGCTTAGGCGT | 59.0 | 0.53 |
| mm4_intron_4732456N10Rik_chr15_101561512_F | TCGTCGGCAGCGTCAACCAGGAAAAGGCAGGTCC | 60.1 | 0.51 |
| mm4_intron_4732456N10Rik_chr15_101561512_R | GTCTCGTGGGCTCGGCGTCACCTTGTCGATCCAGT | 59.7 | 0.51 |
| mm4_intergenic_Gm6480|Smarca1_chrX_47742985_F | Primer3: not found at this Tm | N.d. | 0.49 |
| mm4_intergenic_Gm6480|Smarca1_chrX_47742985_R | Primer3: not found at this Tm | N.d. | 0.49 |
| mm3_intergenic_Il16|Gm7964_chr7_83750299_F | TCGTCGGCAGCGTCCTGGAGCCACAGAACGAAGA | 59.6 | 0.45 |
| mm3_intergenic_Il16|Gm7964_chr7_83750299_R | GTCTCGTGGGCTCGGGGAGACAGAGATGGTGGGAC | 59.1 | 0.45 |
| mm2_intergenic_Hmgb1-ps9|Pik3r1_chr13_101514574_F | TCGTCGGCAGCGTCGCCCCTTTCATTTTGTCCCC | 59.3 | 0.41 |
| mm2_intergenic_Hmgb1-ps9|Pik3r1_chr13_101514574_R | GTCTCGTGGGCTCGGATTCTTCAGCCTCCAGCCTG | 59.7 | 0.41 |
| mm4_intergenic_Gm9871|Cntn3_chr6_101812048_F | Primer3: not found at this Tm | N.d. | 0.41 |
| mm4_intergenic_Gm9871|Cntn3_chr6_101812048_R | Primer3: not found at this Tm | N.d. | 0.41 |
| mm4_intergenic_2610307P16Rik|Gm17528_chr13_28812728_F | TCGTCGGCAGCGTCTCCACATTCCTAGCACACACT | 59.0 | 0.40 |
| mm4_intergenic_2610307P16Rik|Gm17528_chr13_28812728_R | GTCTCGTGGGCTCGGGCATGTCTGCCTGTCTGTCT | 60.0 | 0.40 |
| mm4_intron_Arhgef12_chr9_43006091_F | Primer3: not found at this Tm | N.d. | 0.37 |
| mm4_intron_Arhgef12_chr9_43006091_R | Primer3: not found at this Tm | N.d. | 0.37 |
| mm4_intergenic_Kcnj2|Gm11675_chr11_111108443_F | TCGTCGGCAGCGTCTGAAAGTCCACAGCTTGGGG | 60.1 | 0.37 |
| mm4_intergenic_Kcnj2|Gm11675_chr11_111108443_R | GTCTCGTGGGCTCGGCGCACTCCCTGTCCATTTCA | 60.3 | 0.37 |
| mm3_intergenic_Anapc10|Hhip_chr8_79789796_F | TCGTCGGCAGCGTCCAGAGGATGGTGCTGTGGAA | 59.6 | 0.36 |
| mm3_intergenic_Anapc10|Hhip_chr8_79789796_R | GTCTCGTGGGCTCGGTCTGACCATCTTGCTGCTGT | 59.3 | 0.36 |
| mm3_intron_Neurl1a_chr19_47188986_F | TCGTCGGCAGCGTCTGAGGCTTGGGGTATAGGCT | 60.0 | 0.36 |
| mm3_intron_Neurl1a_chr19_47188986_R | GTCTCGTGGGCTCGGGGCCATTTTCCAAACGAGCA | 59.6 | 0.36 |
| mm4_intergenic_Gm26354|Gm7536_chr3_24307598_F | Primer3: not found at this Tm | N.d. | 0.36 |
| mm4_intergenic_Gm26354|Gm7536_chr3_24307598_R | Primer3: not found at this Tm | N.d. | 0.36 |
| mm3_intron_Postn_chr3_54364661_F | TCGTCGGCAGCGTCTGTGCTTTCTGTGAACAAAACCT | 59.4 | 0.36 |
| mm3_intron_Postn_chr3_54364661_R | GTCTCGTGGGCTCGGAAAGTCATGCTGGGGAAGGG | 59.9 | 0.36 |
| mm4_intron_Stau1_chr2_166993666_F | TCGTCGGCAGCGTCACAGCTGAGAGTTAGTGGAGT | 58.1 | 0.36 |
| mm4_intron_Stau1_chr2_166993666_R | GTCTCGTGGGCTCGGGGAACTGTTGATTCAATCCTTAAGG | 58.1 | 0.36 |
| mm4_intergenic_6330416G13Rik|Gm11213_chr4_63596856_F | Primer3: not found at this Tm | N.d. | 0.36 |
| mm4_intergenic_6330416G13Rik|Gm11213_chr4_63596856_R | Primer3: not found at this Tm | N.d. | 0.36 |
| mm2_intergenic_Gm5046|Gm23907_chr15_65313531_F | TCGTCGGCAGCGTCCTTTGCATGTGTGGAAGGGC | 60.0 | 0.35 |
| mm2_intergenic_Gm5046|Gm23907_chr15_65313531_R | GTCTCGTGGGCTCGGACAGTACTTTGATTCGTTGTGCA | 59.1 | 0.35 |
| mm4_intron_St8sia6_chr2_13722689_F | TCGTCGGCAGCGTCTTACACAGCCGCCTACAAGG | 60.0 | 0.35 |
| mm4_intron_St8sia6_chr2_13722689_R | GTCTCGTGGGCTCGGGAGTGGGAAGGGCAAGAGAA | 59.3 | 0.35 |
| mm4_intron_Apbb2_chr5_66412408_F | Primer3: not found at this Tm | N.d. | 0.34 |
| mm4_intron_Apbb2_chr5_66412408_R | Primer3: not found at this Tm | N.d. | 0.34 |
| mm4_intron_Tpp2_chr1_43951430_F | Primer3: not found at this Tm | N.d. | 0.33 |
| mm4_intron_Tpp2_chr1_43951430_R | Primer3: not found at this Tm | N.d. | 0.33 |
| mm4_intergenic_Dym|Gm20544_chr18_75357786_F | TCGTCGGCAGCGTCTGACAGCAGCTTCTCTTCCC | 59.6 | 0.32 |
| mm4_intergenic_Dym|Gm20544_chr18_75357786_R | GTCTCGTGGGCTCGGGTATCCCCTCTGTCCCCAGT | 60.0 | 0.32 |
| mm4_intergenic_Gm25076|Gm26455_chr5_118269428_F | TCGTCGGCAGCGTCGATGAGCTACTGTCTCTCGGC | 60.0 | 0.31 |
| mm4_intergenic_Gm25076|Gm26455_chr5_118269428_R | GTCTCGTGGGCTCGGTCAGAGAAGGCGTAGTGGGA | 59.9 | 0.31 |
| mm4_intergenic_Npy2r|Gm22038_chr3_82581053_F | Primer3: not found at this Tm | N.d. | 0.31 |
| mm4_intergenic_Npy2r|Gm22038_chr3_82581053_R | Primer3: not found at this Tm | N.d. | 0.31 |
| mm4_intron_Dlg2_chr7_92244372_F | TCGTCGGCAGCGTCACGAGGATGTTGTTTGAGACTGT | 60.1 | 0.31 |
| mm4_intron_Dlg2_chr7_92244372_R | GTCTCGTGGGCTCGGGCAAAGCCTGCCACTATTCA | 58.8 | 0.31 |
| mm4_intergenic_Gm26146|Gm8226_chr9_84348972_F | Primer3: not found at this Tm | N.d. | 0.30 |
| mm4_intergenic_Gm26146|Gm8226_chr9_84348972_R | Primer3: not found at this Tm | N.d. | 0.30 |
| mm4_intron_Hydin_chr8_110313248_F | Primer3: not found at this Tm | N.d. | 0.30 |
| mm4_intron_Hydin_chr8_110313248_R | Primer3: not found at this Tm | N.d. | 0.30 |
| mm4_intergenic_F730035P03Rik|Neu3_chr7_99793136_F | Primer3: not found at this Tm | N.d. | 0.29 |
| mm4_intergenic_F730035P03Rik|Neu3_chr7_99793136_R | Primer3: not found at this Tm | N.d. | 0.29 |
| mm4_intron_Tbc1d2b_chr9_90256337_F | Primer3: not found at this Tm | N.d. | 0.29 |
| mm4_intron_Tbc1d2b_chr9_90256337_R | Primer3: not found at this Tm | N.d. | 0.29 |
| mm4_intergenic_Gm26662|Kirrel3_chr9_34766971_F | TCGTCGGCAGCGTCGCTCAGTATGCCATGCTGCT | 60.8 | 0.29 |
| mm4_intergenic_Gm26662|Kirrel3_chr9_34766971_R | GTCTCGTGGGCTCGGTGCATGACAGGAGTGTGTGA | 59.2 | 0.29 |
| mm4_intron_Unc13c_chr9_73575510_F | Primer3: not found at this Tm | N.d. | 0.28 |
| mm4_intron_Unc13c_chr9_73575510_R | Primer3: not found at this Tm | N.d. | 0.28 |
| mm4_intron_Lgr6_chr1_135088221_F | Primer3: not found at this Tm | N.d. | 0.28 |
| mm4_intron_Lgr6_chr1_135088221_R | Primer3: not found at this Tm | N.d. | 0.28 |
| mm4_intergenic_Edem1|Gm20387_chr6_110321261_F | Primer3: not found at this Tm | N.d. | 0.27 |
| mm4_intergenic_Edem1|Gm20387_chr6_110321261_R | Primer3: not found at this Tm | N.d. | 0.27 |
| mm4_intron_Endod1_chr9_14361303_F | TCGTCGGCAGCGTCTCCAGTCCACACTCCTAGGC | 60.6 | 0.27 |
| mm4_intron_Endod1_chr9_14361303_R | GTCTCGTGGGCTCGGATAAAGGCCACCTGCATGCT | 60.0 | 0.27 |
| mm4_intergenic_Gm5555|Gpr125_chr5_49921642_F | TCGTCGGCAGCGTCACGAACATGGTTCTGTCAAGA | 57.5 | 0.26 |
| mm4_intergenic_Gm5555|Gpr125_chr5_49921642_R | GTCTCGTGGGCTCGGTCTCCTTCCCACTCCTGTAGA | 58.9 | 0.26 |
| mm4_intergenic_Tnfrsf11a|Gm26214_chr1_105901356_F | TCGTCGGCAGCGTCCCAGTTAAGGGCATGGTGCT | 60.3 | 0.26 |
| mm4_intergenic_Tnfrsf11a|Gm26214_chr1_105901356_R | GTCTCGTGGGCTCGGGAGAAGAGGAGGGAATGCGG | 59.8 | 0.26 |
| mm4_intron_Galnt18_chr7_111499722_F | TCGTCGGCAGCGTCTGAGGTGCTTTTAATGCCCC | 58.4 | 0.25 |
| mm4_intron_Galnt18_chr7_111499722_R | GTCTCGTGGGCTCGGGGTCACTATGATATGCTCACCCC | 60.3 | 0.25 |
| mm4_intergenic_Pdyn|Gm14046_chr2_129704978_F | Primer3: not found at this Tm | N.d. | 0.25 |
| mm4_intergenic_Pdyn|Gm14046_chr2_129704978_R | Primer3: not found at this Tm | N.d. | 0.25 |
| mm4_intron_BC006965_chr11_112758088_F | TCGTCGGCAGCGTCCAGAGTCGGAAAGAGGCCTG | 60.1 | 0.24 |
| mm4_intron_BC006965_chr11_112758088_R | GTCTCGTGGGCTCGGGCCCCTACCACATCCTGTTC | 60.1 | 0.24 |
| mm3_intergenic_Mir3095|Gm12577_chr4_58468538_F | TCGTCGGCAGCGTCAGAGGATGGCCCACTCCTTA | 59.6 | 0.23 |
| mm3_intergenic_Mir3095|Gm12577_chr4_58468538_R | GTCTCGTGGGCTCGGCGGGAAGAGATAGAACACAATGC | 59.4 | 0.23 |
| mm3_intergenic_Gm25875|Gm23835_chr15_60327501_F | TCGTCGGCAGCGTCAGGGAGCAATTTAGCTGTTGT | 57.8 | 0.22 |
| mm3_intergenic_Gm25875|Gm23835_chr15_60327501_R | GTCTCGTGGGCTCGGGCATTCCAGATCCCGGAGAG | 59.9 | 0.22 |
| mm4_exon_Asic3_chr5_24417530_F | TCGTCGGCAGCGTCCTTCCCACAGCTCCAGGAAG | 60.0 | 0.22 |
| mm4_exon_Asic3_chr5_24417530_R | GTCTCGTGGGCTCGGTGAACCTGTCCTGTCCCCAT | 60.4 | 0.22 |
| mm4_intron_Stac2_chr11_98050267_F | Primer3: not found at this Tm | N.d. | 0.22 |
| mm4_intron_Stac2_chr11_98050267_R | Primer3: not found at this Tm | N.d. | 0.22 |
| mm4_intergenic_Gm14797|Gm649_chrX_89162018_F | Primer3: not found at this Tm | N.d. | 0.22 |
| mm4_intergenic_Gm14797|Gm649_chrX_89162018_R | Primer3: not found at this Tm | N.d. | 0.22 |
| mm4_intron_Fam20c_chr5_138769100_F | TCGTCGGCAGCGTCCAGGCCAGGTGACAAATGGA | 60.2 | 0.21 |
| mm4_intron_Fam20c_chr5_138769100_R | GTCTCGTGGGCTCGGAACTCACCTCCCAGATCCCA | 59.8 | 0.21 |
| mm4_intron_Ppap2b_chr4_105159328_F | TCGTCGGCAGCGTCGGAGGGAAGATTACGGGCTG | 59.8 | 0.21 |
| mm4_intron_Ppap2b_chr4_105159328_R | GTCTCGTGGGCTCGGCCCCAGTGACAAGTCCTCTG | 59.6 | 0.21 |
| mm4_intergenic_Gm12893|Gm12895_chr4_122252503_F | TCGTCGGCAGCGTCTCCTGGCTTCTAAATGGACACA | 59.3 | 0.21 |
| mm4_intergenic_Gm12893|Gm12895_chr4_122252503_R | GTCTCGTGGGCTCGGGGGCAAAGAATGTGGTTCTCAG | 59.7 | 0.21 |
| mm4_intergenic_Gm12892|Gm12896_chr4_122045737_F | TCGTCGGCAGCGTCTCCTGGCTTCTAAATTGACACA | 57.6 | 0.21 |
| mm4_intergenic_Gm12892|Gm12896_chr4_122045737_R | GTCTCGTGGGCTCGGGGGCAAAGAATGTGGTTCTCAG | 59.7 | 0.21 |
| mm4_intergenic_Gm12878|Gm12892_chr4_121859555_F | TCGTCGGCAGCGTCTCCTGGCTTCTAAATGGACACA | 59.3 | 0.21 |
| mm4_intergenic_Gm12878|Gm12892_chr4_121859555_R | GTCTCGTGGGCTCGGGGGCAAAGAATGTGGTTCTCAG | 59.7 | 0.21 |
| mm4_intergenic_Gm12829|9130410C08Rik_chr4_114816218_F | Primer3: not found at this Tm | N.d. | 0.20 |
| mm4_intergenic_Gm12829|9130410C08Rik_chr4_114816218_R | Primer3: not found at this Tm | N.d. | 0.20 |
| mm4_intergenic_AC102758.1|Sox6_chr7_115327708_F | TCGTCGGCAGCGTCCTTGTATGCAGGCCTGGGAA | 60.0 | 0.20 |
| mm4_intergenic_AC102758.1|Sox6_chr7_115327708_R | GTCTCGTGGGCTCGGAGGGATTGGAGGGGATCACC | 60.6 | 0.20 |
| mm4_intergenic_Pbx1|Pbx1/AC096625.1_chr1_168266183_F | TCGTCGGCAGCGTCCTTCCTCCTCCTACCCTCCC | 60.1 | 0.19 |
| mm4_intergenic_Pbx1|Pbx1/AC096625.1_chr1_168266183_R | GTCTCGTGGGCTCGGCCTCAGGCATCATTGGTGTG | 58.8 | 0.19 |
| mm4_intergenic_Trap1|Crebbp_chr16_4082376_F | TCGTCGGCAGCGTCGAACCACCTCAAGTCCCTGG | 59.9 | 0.19 |
| mm4_intergenic_Trap1|Crebbp_chr16_4082376_R | GTCTCGTGGGCTCGGCCCACTCTTCCTGTCCTCCT | 60.2 | 0.19 |
| mm4_intergenic_Gm25666|Cib4_chr5_30518373_F | TCGTCGGCAGCGTCCTGGCTCAGCTCCAGCAG | 60.1 | 0.19 |
| mm4_intergenic_Gm25666|Cib4_chr5_30518373_R | GTCTCGTGGGCTCGGCGGAAGAATCAGGCCCCTTT | 60.0 | 0.19 |
| mm4_intergenic_Lrrc31|Samd7_chr3_30701577_F | Primer3: not found at this Tm | N.d. | 0.19 |
| mm4_intergenic_Lrrc31|Samd7_chr3_30701577_R | Primer3: not found at this Tm | N.d. | 0.19 |
| mm4_intergenic_Csnka2ip|4930453N24Rik_chr16_64640086_F | Primer3: not found at this Tm | N.d. | 0.19 |
| mm4_intergenic_Csnka2ip|4930453N24Rik_chr16_64640086_R | Primer3: not found at this Tm | N.d. | 0.19 |
| mm4_exon_Sh2d4b_chr14_40872595_F | TCGTCGGCAGCGTCCAGGTGCCCCTCATACACAC | 60.3 | 0.19 |
| mm4_exon_Sh2d4b_chr14_40872595_R | GTCTCGTGGGCTCGGGGATGCCTTGGCCAATGAGA | 60.3 | 0.19 |
| mm4_intergenic_Gm7405|Dach2_chrX_113255720_F | Primer3: not found at this Tm | N.d. | 0.19 |
| mm4_intergenic_Gm7405|Dach2_chrX_113255720_R | Primer3: not found at this Tm | N.d. | 0.19 |
| mm4_intron_Pparg_chr6_115476687_F | TCGTCGGCAGCGTCCTGGGGAAATGGTGAGCTCT | 59.3 | 0.18 |
| mm4_intron_Pparg_chr6_115476687_R | GTCTCGTGGGCTCGGACCCAGCAAATCCCCAGTTG | 60.5 | 0.18 |
| mm4_intergenic_Gm25010|Unc13b_chr4_43207377_F | Primer3: not found at this Tm | N.d. | 0.18 |
| mm4_intergenic_Gm25010|Unc13b_chr4_43207377_R | Primer3: not found at this Tm | N.d. | 0.18 |
| mm4_exon_Mrto4_chr4_139352452_F | TCGTCGGCAGCGTCCGCCCAGTGTCCTGAAGG | 60.0 | 0.18 |
| mm4_exon_Mrto4_chr4_139352452_R | GTCTCGTGGGCTCGGAGCCATAGAGAGGAACCGGT | 60.0 | 0.18 |
| mm4_intergenic_Gm16087|Gm16086_chr12_106970112_F | TCGTCGGCAGCGTCTGCCATGAACCCACTGATCA | 59.3 | 0.17 |
| mm4_intergenic_Gm16087|Gm16086_chr12_106970112_R | GTCTCGTGGGCTCGGAGAGAGACTGGCCTGGCTG | 60.9 | 0.17 |
| mm4_intergenic_E230016M11Rik|A430010J10Rik_chr6_67090340_F | Primer3: not found at this Tm | N.d. | 0.16 |
| mm4_intergenic_E230016M11Rik|A430010J10Rik_chr6_67090340_R | Primer3: not found at this Tm | N.d. | 0.16 |
| mm3_intergenic_Dnajc1|Gm13354_chr2_18403507_F | TCGTCGGCAGCGTCCACACACACCACAATCAACCA | 59.2 | 0.16 |
| mm3_intergenic_Dnajc1|Gm13354_chr2_18403507_R | GTCTCGTGGGCTCGGTGGCTGGTGTGGACTGGATA | 60.5 | 0.16 |
| mm4_intergenic_Mobp|Myrip_chr9_120254834_F | Primer3: not found at this Tm | N.d. | 0.15 |
| mm4_intergenic_Mobp|Myrip_chr9_120254834_R | Primer3: not found at this Tm | N.d. | 0.15 |
| mm4_exon_Clip1_chr5_123613156_F | Primer3: not found at this Tm | N.d. | 0.15 |
| mm4_exon_Clip1_chr5_123613156_R | Primer3: not found at this Tm | N.d. | 0.15 |
| mm4_intron_Ccl17_chr8_94811320_F | TCGTCGGCAGCGTCAGTGTTCCAGGGATGCCATC | 59.7 | 0.15 |
| mm4_intron_Ccl17_chr8_94811320_R | GTCTCGTGGGCTCGGGGGGAATCAGGCTTGTCCTC | 60.1 | 0.15 |
| mm4_intergenic_Gm12506|Gm12519_chr4_55714638_F | TCGTCGGCAGCGTCGTCTCTGAAGTACTGCTGCCA | 59.7 | 0.15 |
| mm4_intergenic_Gm12506|Gm12519_chr4_55714638_R | GTCTCGTGGGCTCGGTCATGCTGGCTCTCTCTTGC | 60.1 | 0.15 |
| mm4_exon_C2cd5_chr6_143011926_F | TCGTCGGCAGCGTCGCATCCCTGCTCCTCAGTAC | 59.8 | 0.15 |
| mm4_exon_C2cd5_chr6_143011926_R | GTCTCGTGGGCTCGGCTCAACTGGCTCAACCGAGT | 59.9 | 0.15 |
| mm4_intergenic_1700063H04Rik|Rimklb_chr6_122432756_F | Primer3: not found at this Tm | N.d. | 0.15 |
| mm4_intergenic_1700063H04Rik|Rimklb_chr6_122432756_R | Primer3: not found at this Tm | N.d. | 0.15 |
| mm4_exon_Gm18159_chr6_142110612_F | TCGTCGGCAGCGTCTGTGGCTCTCTGGTGTTCAC | 59.8 | 0.14 |
| mm4_exon_Gm18159_chr6_142110612_R | GTCTCGTGGGCTCGGCTGTTCCCACAGCTTCATGC | 59.4 | 0.14 |
| mm4_intron_Gm13598_chr2_67160649_F | Primer3: not found at this Tm | N.d. | 0.14 |
| mm4_intron_Gm13598_chr2_67160649_R | Primer3: not found at this Tm | N.d. | 0.14 |
| mm3_intergenic_Shisa9|Gm6327_chr16_12514321_F | TCGTCGGCAGCGTCTCCAGCCTCAGTTACCCACT | 60.1 | 0.14 |
| mm3_intergenic_Shisa9|Gm6327_chr16_12514321_R | GTCTCGTGGGCTCGGCCAGGGCACGTCTGAAATGA | 60.3 | 0.14 |
| mm4_intergenic_Gm22223|Gm22715_chr8_102227971_F | Primer3: not found at this Tm | N.d. | 0.14 |
| mm4_intergenic_Gm22223|Gm22715_chr8_102227971_R | Primer3: not found at this Tm | N.d. | 0.14 |
| mm4_intergenic_Gm8644|Gm15171_chrX_157657619_F | Primer3: not found at this Tm | N.d. | 0.14 |
| mm4_intergenic_Gm8644|Gm15171_chrX_157657619_R | Primer3: not found at this Tm | N.d. | 0.14 |
| mm4_intergenic_Gm5108|Grxcr1_chr5_68030398_F | Primer3: not found at this Tm | N.d. | 0.13 |
| mm4_intergenic_Gm5108|Grxcr1_chr5_68030398_R | Primer3: not found at this Tm | N.d. | 0.13 |
| mm3_intergenic_Gm22764|Gm4822_chr14_112328008_F | TCGTCGGCAGCGTCGCCACTGGACTTGGGACTAG | 59.7 | 0.13 |
| mm3_intergenic_Gm22764|Gm4822_chr14_112328008_R | GTCTCGTGGGCTCGGAGTCTGGCTTGAGTATGAAAAGA | 57.5 | 0.13 |
| mm2_exon_4933440M02Rik_chr7_125349549_F | Primer3: not found at this Tm | N.d. | 0.13 |
| mm2_exon_4933440M02Rik_chr7_125349549_R | Primer3: not found at this Tm | N.d. | 0.13 |
| mm3_intron_D430041D05Rik_chr2_104155779_F | TCGTCGGCAGCGTCGCTCCCACAGTCCTGTTTCA | 59.8 | 0.13 |
| mm3_intron_D430041D05Rik_chr2_104155779_R | GTCTCGTGGGCTCGGTTGGGCCCCTGATTTAACCC | 59.9 | 0.13 |
| mm4_intergenic_Nxph3|Ngfr_chr11_95534809_F | Primer3: not found at this Tm | N.d. | 0.12 |
| mm4_intergenic_Nxph3|Ngfr_chr11_95534809_R | Primer3: not found at this Tm | N.d. | 0.12 |
| mm4_exon_Srsf10_chr4_135863940_F | TCGTCGGCAGCGTCAGTCTGGCTCAAGATATGAAAAGGA | 59.8 | 0.12 |
| mm4_exon_Srsf10_chr4_135863940_R | GTCTCGTGGGCTCGGGCCACTGGACTTGGGACTAG | 59.7 | 0.12 |
| mm4_exon_Gm5446_chr13_19995083_F | Primer3: not found at this Tm | N.d. | 0.12 |
| mm4_exon_Gm5446_chr13_19995083_R | Primer3: not found at this Tm | N.d. | 0.12 |
| mm4_intergenic_A4galt|Arfgap3_chr15_83295179_F | TCGTCGGCAGCGTCCCATGTTGAGGGCAAGTGGA | 60.2 | 0.12 |
| mm4_intergenic_A4galt|Arfgap3_chr15_83295179_R | GTCTCGTGGGCTCGGACAATGGCCTCAGGAACCAG | 59.9 | 0.12 |
| mm4_intergenic_A1bg|Gm24696_chr15_61133409_F | Primer3: not found at this Tm | N.d. | 0.12 |
| mm4_intergenic_A1bg|Gm24696_chr15_61133409_R | Primer3: not found at this Tm | N.d. | 0.12 |
| mm4_intron_Ptch1_chr13_63531869_F | Primer3: not found at this Tm | N.d. | 0.12 |
| mm4_intron_Ptch1_chr13_63531869_R | Primer3: not found at this Tm | N.d. | 0.12 |
| mm4_intergenic_Gm16065|Tbx5_chr5_119800812_F | TCGTCGGCAGCGTCAGACCCTCTCCCTTCCACTG | 60.2 | 0.12 |
| mm4_intergenic_Gm16065|Tbx5_chr5_119800812_R | GTCTCGTGGGCTCGGGAATTTCCAGTGGGCGCTG | 59.4 | 0.12 |
| mm4_intron_Epb4.1l4a_chr18_33974243_F | TCGTCGGCAGCGTCGCAGGTACCTGAGAGTGACC | 59.4 | 0.12 |
| mm4_intron_Epb4.1l4a_chr18_33974243_R | GTCTCGTGGGCTCGGGGCTACAGGGTATTCCTTCCT | 58.5 | 0.12 |
| mm4_intergenic_Plac8|Coq2_chr5_100629043_F | TCGTCGGCAGCGTCGTCAGCTCCCTCGCTCTTTT | 60.0 | 0.11 |
| mm4_intergenic_Plac8|Coq2_chr5_100629043_R | GTCTCGTGGGCTCGGAGAGAGAGAGAGAACTCAGCAGA | 59.7 | 0.11 |
| mm4_intron_Syk_chr13_52596293_F | TCGTCGGCAGCGTCCAGTGAACTCGCTCCCTTGT | 59.9 | 0.11 |
| mm4_intron_Syk_chr13_52596293_R | GTCTCGTGGGCTCGGTCATCGGGGTTTGGGTATGC | 60.1 | 0.11 |
| mm4_intergenic_Gm25740|Gm23481_chr10_46412418_F | Primer3: not found at this Tm | N.d. | 0.11 |
| mm4_intergenic_Gm25740|Gm23481_chr10_46412418_R | Primer3: not found at this Tm | N.d. | 0.11 |
| mm4_intergenic_Fos|Jdp2_chr12_85541658_F | Primer3: not found at this Tm | N.d. | 0.11 |
| mm4_intergenic_Fos|Jdp2_chr12_85541658_R | Primer3: not found at this Tm | N.d. | 0.11 |
| mm4_intergenic_Btg2|Gm8618_chr1_134084261_F | TCGTCGGCAGCGTCGAAGAGACATGGCTGCCCTT | 60.0 | 0.11 |
| mm4_intergenic_Btg2|Gm8618_chr1_134084261_R | GTCTCGTGGGCTCGGTGTAGAGAGAGTCGTGGCCT | 59.6 | 0.11 |
| mm4_intergenic_Sec16b|Brinp2_chr1_157755196_F | TCGTCGGCAGCGTCGGGGAGAGACAGAAACCAGC | 60.0 | 0.11 |
| mm4_intergenic_Sec16b|Brinp2_chr1_157755196_R | GTCTCGTGGGCTCGGGTTCAACACTCGGAGCCAGA | 59.9 | 0.11 |
| mm4_intergenic_Snx19|Adamts15_chr9_30707346_F | TCGTCGGCAGCGTCGCCAGGATCCAGTCTGCTTT | 60.0 | 0.10 |
| mm4_intergenic_Snx19|Adamts15_chr9_30707346_R | GTCTCGTGGGCTCGGAGGGTCTTTCTCAGTTTTGCT | 57.4 | 0.10 |
| mm4_intergenic_Gm15422|Gm17615_chr14_123988706_F | Primer3: not found at this Tm | N.d. | 0.10 |
| mm4_intergenic_Gm15422|Gm17615_chr14_123988706_R | Primer3: not found at this Tm | N.d. | 0.10 |
| mm4_exon_Rmnd1_chr10_4402634_F | TCGTCGGCAGCGTCCGGCCAAGGCACAAAATGAA | 59.9 | 0.10 |
| mm4_exon_Rmnd1_chr10_4402634_R | GTCTCGTGGGCTCGGTTTTAGTCATAGCTCTGCCCC | 57.4 | 0.10 |
| mm4_intergenic_Hhip|Gm5909_chr8_80071970_F | Primer3: not found at this Tm | N.d. | 0.10 |
| mm4_intergenic_Hhip|Gm5909_chr8_80071970_R | Primer3: not found at this Tm | N.d. | 0.10 |
| mm4_intron_Sh3kbp1_chrX_159874116_F | TCGTCGGCAGCGTCGCTCAATGGCTAAAATGCTGC | 58.8 | 0.10 |
| mm4_intron_Sh3kbp1_chrX_159874116_R | GTCTCGTGGGCTCGGAGCAATGACATTTCAACACTCCA | 59.1 | 0.10 |
| mm4_intergenic_1700066B19Rik|Tmem173_chr18_35732846_F | Primer3: not found at this Tm | N.d. | 0.10 |
| mm4_intergenic_1700066B19Rik|Tmem173_chr18_35732846_R | Primer3: not found at this Tm | N.d. | 0.10 |
| mm4_intron_Phlpp1_chr1_106387510_F | Primer3: not found at this Tm | N.d. | 0.10 |
| mm4_intron_Phlpp1_chr1_106387510_R | Primer3: not found at this Tm | N.d. | 0.10 |
| mm4_intergenic_Tcf7l2|Gm22271_chr19_56195973_F | TCGTCGGCAGCGTCTACCCACAATCCCCACTTGC | 59.9 | 0.10 |
| mm4_intergenic_Tcf7l2|Gm22271_chr19_56195973_R | GTCTCGTGGGCTCGGGCTGAGCTCTGCACCCAATA | 60.1 | 0.10 |
| mm4_intergenic_A930031H19Rik|Gm25261_chr4_131141751_F | TCGTCGGCAGCGTCCGACCTTTGCTCCTAGGGTC | 59.8 | 0.09 |
| mm4_intergenic_A930031H19Rik|Gm25261_chr4_131141751_R | GTCTCGTGGGCTCGGGACCGTAGCTGATAAGGGGC | 59.9 | 0.09 |
| mm4_intergenic_Kcnip1|Kcnmb1_chr11_33960993_F | TCGTCGGCAGCGTCCTTCCCCTGTGGCCATCATT | 60.0 | 0.09 |
| mm4_intergenic_Kcnip1|Kcnmb1_chr11_33960993_R | GTCTCGTGGGCTCGGCAAGCTTCGCTCTGCCTCTA | 59.8 | 0.09 |
| mm4_intergenic_Agtr1b|Gm7488_chr3_20816947_F | Primer3: not found at this Tm | N.d. | 0.09 |
| mm4_intergenic_Agtr1b|Gm7488_chr3_20816947_R | Primer3: not found at this Tm | N.d. | 0.09 |
| mm4_intron_P2rx3_chr2_85003023_F | TCGTCGGCAGCGTCCCATGTCAGCGACTGTGTCT | 60.0 | 0.09 |
| mm4_intron_P2rx3_chr2_85003023_R | GTCTCGTGGGCTCGGATAGCAAGAGACAGGCACCC | 59.4 | 0.09 |
| mm4_intron_4933440M02Rik_chr7_125334973_F | TCGTCGGCAGCGTCTGGCAACTGTCCAATTCACC | 58.6 | 0.09 |
| mm4_intron_4933440M02Rik_chr7_125334973_R | GTCTCGTGGGCTCGGGGATGCTTGGCCATTGCTTG | 60.4 | 0.09 |
| mm4_intergenic_Gm25169|Efnb2_chr8_8095666_F | TCGTCGGCAGCGTCGCTGGAGTCAGGTTTCCTCG | 60.3 | 0.09 |
| mm4_intergenic_Gm25169|Efnb2_chr8_8095666_R | GTCTCGTGGGCTCGGTGCACATGTGTTGATGGCAG | 59.4 | 0.09 |
| mm3_exon_Trim29_chr9_43311227_F | Primer3: not found at this Tm | N.d. | 0.09 |
| mm3_exon_Trim29_chr9_43311227_R | Primer3: not found at this Tm | N.d. | 0.09 |
| mm4_intergenic_Gm25672|Barhl2_chr5_106082540_F | Primer3: not found at this Tm | N.d. | 0.09 |
| mm4_intergenic_Gm25672|Barhl2_chr5_106082540_R | Primer3: not found at this Tm | N.d. | 0.09 |
| mm4_exon_Ptpru_chr4_131798154_F | Primer3: not found at this Tm | N.d. | 0.09 |
| mm4_exon_Ptpru_chr4_131798154_R | Primer3: not found at this Tm | N.d. | 0.09 |
| mm4_intergenic_Gm23835|Fam84b/9930014A18Rik_chr15_60748955_F | TCGTCGGCAGCGTCCCCACAGCATCTGATGACGA | 59.8 | 0.09 |
| mm4_intergenic_Gm23835|Fam84b/9930014A18Rik_chr15_60748955_R | GTCTCGTGGGCTCGGCGCCCTTGGATAGCTGTACT | 59.2 | 0.09 |
| mm4_intron_Slc4a4_chr5_88916560_F | Primer3: not found at this Tm | N.d. | 0.09 |
| mm4_intron_Slc4a4_chr5_88916560_R | Primer3: not found at this Tm | N.d. | 0.09 |
| mm4_intergenic_Cntnap5a|Gm19965_chr1_116689538_F | Primer3: not found at this Tm | N.d. | 0.09 |
| mm4_intergenic_Cntnap5a|Gm19965_chr1_116689538_R | Primer3: not found at this Tm | N.d. | 0.09 |
| mm4_intergenic_Edn2|Foxo6_chr4_120182106_F | Primer3: not found at this Tm | N.d. | 0.09 |
| mm4_intergenic_Edn2|Foxo6_chr4_120182106_R | Primer3: not found at this Tm | N.d. | 0.09 |
| mm4_intergenic_Gm26307|Gm26937_chr16_74648200_F | Primer3: not found at this Tm | N.d. | 0.09 |
| mm4_intergenic_Gm26307|Gm26937_chr16_74648200_R | Primer3: not found at this Tm | N.d. | 0.09 |
| mm4_intron_Cant1_chr11_118409056_F | Primer3: not found at this Tm | N.d. | 0.09 |
| mm4_intron_Cant1_chr11_118409056_R | Primer3: not found at this Tm | N.d. | 0.09 |
| mm4_intergenic_Tcf7l2|Gm22271_chr19_56034871_F | TCGTCGGCAGCGTCAAGTCCTCACACAGAAGCCG | 59.9 | 0.09 |
| mm4_intergenic_Tcf7l2|Gm22271_chr19_56034871_R | GTCTCGTGGGCTCGGTGGCCATGAGGTAGAGCAAG | 59.4 | 0.09 |
| mm4_intergenic_Rragc|Gm12916_chr4_123950600_F | TCGTCGGCAGCGTCCTGGTTCTAAAGCCGTGGGT | 59.9 | 0.09 |
| mm4_intergenic_Rragc|Gm12916_chr4_123950600_R | GTCTCGTGGGCTCGGCCAAAGCAGGGCATCCATTG | 59.8 | 0.09 |
| mm2_intron_Fggy_chr4_95686167_F | TCGTCGGCAGCGTCGTCCTTATACCCTGGCAGCC | 59.8 | 0.09 |
| mm2_intron_Fggy_chr4_95686167_R | GTCTCGTGGGCTCGGCCACACAGCAGGAAGATGGT | 59.9 | 0.09 |
| mm4_intergenic_Gm12680|Gm26069_chr4_85857803_F | Primer3: not found at this Tm | N.d. | 0.08 |
| mm4_intergenic_Gm12680|Gm26069_chr4_85857803_R | Primer3: not found at this Tm | N.d. | 0.08 |
| mm4_intergenic_Arhgap25|Prokr1_chr6_87554095_F | TCGTCGGCAGCGTCCCAAGAGAATGGGTGCAGCT | 60.3 | 0.08 |
| mm4_intergenic_Arhgap25|Prokr1_chr6_87554095_R | GTCTCGTGGGCTCGGCTCAGAAGCACCACCCTCAG | 60.0 | 0.08 |
| mm2_intron_Gad2_chr2_22656138_F | Primer3: not found at this Tm | N.d. | 0.08 |
| mm2_intron_Gad2_chr2_22656138_R | Primer3: not found at this Tm | N.d. | 0.08 |
| mm4_intron_Myo18a_chr11_77808822_F | TCGTCGGCAGCGTCGACCTAGCCACCCTGCATTT | 60.0 | 0.08 |
| mm4_intron_Myo18a_chr11_77808822_R | GTCTCGTGGGCTCGGAGGCAAGGGAAGATGGCAAA | 59.8 | 0.08 |
| mm4_intergenic_Eif4g2|Galnt18_chr7_111083452_F | TCGTCGGCAGCGTCCTTTTCCTCGCCTCTCCTCC | 59.8 | 0.08 |
| mm4_intergenic_Eif4g2|Galnt18_chr7_111083452_R | GTCTCGTGGGCTCGGTTCCTATCGATGGGCACACG | 59.8 | 0.08 |
| mm4_intergenic_4921504E06Rik|Gm13348_chr2_19563824_F | Primer3: not found at this Tm | N.d. | 0.08 |
| mm4_intergenic_4921504E06Rik|Gm13348_chr2_19563824_R | Primer3: not found at this Tm | N.d. | 0.08 |
| mm4_intergenic_2410089E03Rik|Nipbl_chr15_8288238_F | TCGTCGGCAGCGTCTCACTAGAAACTCGGCTTCG | 57.3 | 0.08 |
| mm4_intergenic_2410089E03Rik|Nipbl_chr15_8288238_R | GTCTCGTGGGCTCGGTTACACGTGGTGGCTAAGGA | 58.6 | 0.08 |
| mm4_intron_Nkd1_chr8_88538571_F | TCGTCGGCAGCGTCTACAGAACGGAGTCTGTGCC | 59.3 | 0.08 |
| mm4_intron_Nkd1_chr8_88538571_R | GTCTCGTGGGCTCGGGCACTGTGTGAGAAGGGTCC | 60.6 | 0.08 |
| mm4_intron_Rb1cc1_chr1_6246750_F | Primer3: not found at this Tm | N.d. | 0.07 |
| mm4_intron_Rb1cc1_chr1_6246750_R | Primer3: not found at this Tm | N.d. | 0.07 |
| mm4_intron_Pot1a_chr6_25782011_F | TCGTCGGCAGCGTCTGGTACACCTACACTGGCAT | 58.3 | 0.07 |
| mm4_intron_Pot1a_chr6_25782011_R | GTCTCGTGGGCTCGGTGGCCAGCTAAATGTGCTCA | 59.9 | 0.07 |
| mm4_exon_Deptor_chr15_55257826_F | Primer3: not found at this Tm | N.d. | 0.07 |
| mm4_exon_Deptor_chr15_55257826_R | Primer3: not found at this Tm | N.d. | 0.07 |
| mm4_intron_Cabp5_chr7_13403153_F | Primer3: not found at this Tm | N.d. | 0.07 |
| mm4_intron_Cabp5_chr7_13403153_R | Primer3: not found at this Tm | N.d. | 0.07 |
| mm4_intergenic_Gabrb2|Gm25543_chr11_42837548_F | TCGTCGGCAGCGTCTCAGACAAAAGAAACACTGTCCA | 58.4 | 0.07 |
| mm4_intergenic_Gabrb2|Gm25543_chr11_42837548_R | GTCTCGTGGGCTCGGACCTTGTCCTGAATGCCTGG | 59.9 | 0.07 |
| mm4_intergenic_RP23-402M18.1|Gm22315_chr9_74744980_F | Primer3: not found at this Tm | N.d. | 0.07 |
| mm4_intergenic_RP23-402M18.1|Gm22315_chr9_74744980_R | Primer3: not found at this Tm | N.d. | 0.07 |
| mm3_exon_Fermt1_chr2_132905936_F | TCGTCGGCAGCGTCTTTCTTGAGACCCAGCCCAG | 59.5 | 0.07 |
| mm3_exon_Fermt1_chr2_132905936_R | GTCTCGTGGGCTCGGAAGACACAGGTGCTGAAGGG | 59.8 | 0.07 |
| mm3_intron_Celf2_chr2_6590746_F | Primer3: not found at this Tm | N.d. | 0.07 |
| mm3_intron_Celf2_chr2_6590746_R | Primer3: not found at this Tm | N.d. | 0.07 |
| mm4_intergenic_Lrrc7|Gm9423_chr3_158714549_F | TCGTCGGCAGCGTCACCAAGATAATCCTGTGTTCCA | 57.0 | 0.07 |
| mm4_intergenic_Lrrc7|Gm9423_chr3_158714549_R | GTCTCGTGGGCTCGGGCCAATTACTAGTGACCATGGC | 59.3 | 0.07 |
| mm3_intron_Arid3b_chr9_57794197_F | Primer3: not found at this Tm | N.d. | 0.07 |
| mm3_intron_Arid3b_chr9_57794197_R | Primer3: not found at this Tm | N.d. | 0.07 |
| mm4_intron_Mei1_chr15_82119846_F | TCGTCGGCAGCGTCACAGCAAGGGCCTTACCATC | 60.0 | 0.07 |
| mm4_intron_Mei1_chr15_82119846_R | GTCTCGTGGGCTCGGATCTGTGCTCCTTGCCAGAC | 60.0 | 0.07 |
| mm4_intergenic_Gm25658|Atp2b1_chr10_98406905_F | Primer3: not found at this Tm | N.d. | 0.07 |
| mm4_intergenic_Gm25658|Atp2b1_chr10_98406905_R | Primer3: not found at this Tm | N.d. | 0.07 |
| mm3_intron_Dcaf5_chr12_80435027_F | Primer3: not found at this Tm | N.d. | 0.06 |
| mm3_intron_Dcaf5_chr12_80435027_R | Primer3: not found at this Tm | N.d. | 0.06 |
| mm4_intergenic_Gm15189|Rps6ka3_chrX_159170036_F | TCGTCGGCAGCGTCCACTATTCCCACGTCTAGCTCA | 59.3 | 0.06 |
| mm4_intergenic_Gm15189|Rps6ka3_chrX_159170036_R | GTCTCGTGGGCTCGGGCATTCAACTGGCAGGTGTG | 60.0 | 0.06 |
| mm4_intron_Wdr48_chr9_119920877_F | Primer3: not found at this Tm | N.d. | 0.06 |
| mm4_intron_Wdr48_chr9_119920877_R | Primer3: not found at this Tm | N.d. | 0.06 |
| mm4_intergenic_Rbfox1|Gm23476_chr16_8005387_F | Primer3: not found at this Tm | N.d. | 0.06 |
| mm4_intergenic_Rbfox1|Gm23476_chr16_8005387_R | Primer3: not found at this Tm | N.d. | 0.06 |
| mm4_exon_Stk11_chr10_80128988_F | Primer3: not found at this Tm | N.d. | 0.06 |
| mm4_exon_Stk11_chr10_80128988_R | Primer3: not found at this Tm | N.d. | 0.06 |
| mm3_intergenic_4930564D02Rik|1700095B22Rik_chr3_105357718_F | Primer3: not found at this Tm | N.d. | 0.06 |
| mm3_intergenic_4930564D02Rik|1700095B22Rik_chr3_105357718_R | Primer3: not found at this Tm | N.d. | 0.06 |
| mm4_intergenic_Gm12912|Tmem261_chr4_75269670_F | Primer3: not found at this Tm | N.d. | 0.06 |
| mm4_intergenic_Gm12912|Tmem261_chr4_75269670_R | Primer3: not found at this Tm | N.d. | 0.06 |
| mm4_intergenic_Tcte2|Gm24867_chr17_13570250_F | Primer3: not found at this Tm | N.d. | 0.06 |
| mm4_intergenic_Tcte2|Gm24867_chr17_13570250_R | Primer3: not found at this Tm | N.d. | 0.06 |
| mm3_intergenic_Gm11381|Mylk4_chr13_32595803_F | Primer3: not found at this Tm | N.d. | 0.06 |
| mm3_intergenic_Gm11381|Mylk4_chr13_32595803_R | Primer3: not found at this Tm | N.d. | 0.06 |
| mm4_exon_Ahsa2/Usp34_chr11_23488393_F | TCGTCGGCAGCGTCGCAGCAGAGAAACTCACTCCA | 60.2 | 0.06 |
| mm4_exon_Ahsa2/Usp34_chr11_23488393_R | GTCTCGTGGGCTCGGCCACACCTCCAAGCTTGTCT | 59.8 | 0.06 |
| mm3_intergenic_Gm10247|Grin2a_chr16_8931993_F | Primer3: not found at this Tm | N.d. | 0.06 |
| mm3_intergenic_Gm10247|Grin2a_chr16_8931993_R | Primer3: not found at this Tm | N.d. | 0.06 |
| mm4_intergenic_4930564D02Rik|1700095B22Rik_chr3_105180384_F | Primer3: not found at this Tm | N.d. | 0.06 |
| mm4_intergenic_4930564D02Rik|1700095B22Rik_chr3_105180384_R | Primer3: not found at this Tm | N.d. | 0.06 |
| mm4_intron_Gm14005_chr2_128366527_F | Primer3: not found at this Tm | N.d. | 0.06 |
| mm4_intron_Gm14005_chr2_128366527_R | Primer3: not found at this Tm | N.d. | 0.06 |
| mm4_intergenic_Tbc1d22a|Gm23416_chr15_86559203_F | Primer3: not found at this Tm | N.d. | 0.06 |
| mm4_intergenic_Tbc1d22a|Gm23416_chr15_86559203_R | Primer3: not found at this Tm | N.d. | 0.06 |
| mm4_exon_Smg1_chr7_118243252_F | Primer3: not found at this Tm | N.d. | 0.06 |
| mm4_exon_Smg1_chr7_118243252_R | Primer3: not found at this Tm | N.d. | 0.06 |
| mm4_intergenic_Aurkaip1|Gm10562/Mxra8_chr4_155835131_F | TCGTCGGCAGCGTCCACACAGAGTCAGACCTGGG | 59.6 | 0.06 |
| mm4_intergenic_Aurkaip1|Gm10562/Mxra8_chr4_155835131_R | GTCTCGTGGGCTCGGGGAAGGACTTGTGACCTGGG | 59.9 | 0.06 |
| mm3_intron_Ints7_chr1_191598811_F | TCGTCGGCAGCGTCCACCGTGAGATCCTGTTGCT | 60.0 | 0.06 |
| mm3_intron_Ints7_chr1_191598811_R | GTCTCGTGGGCTCGGTCATTGGTAAAGCATGCAGC | 57.0 | 0.06 |
| mm4_exon_Myh10_chr11_68811602_F | Primer3: not found at this Tm | N.d. | 0.05 |
| mm4_exon_Myh10_chr11_68811602_R | Primer3: not found at this Tm | N.d. | 0.05 |
| mm4_intron_Rmi2_chr16_10858618_F | Primer3: not found at this Tm | N.d. | 0.05 |
| mm4_intron_Rmi2_chr16_10858618_R | Primer3: not found at this Tm | N.d. | 0.05 |
| mm4_intron_Col23a1_chr11_51547301_F | TCGTCGGCAGCGTCACAGTCTCTCTGAGGCCCAT | 59.9 | 0.05 |
| mm4_intron_Col23a1_chr11_51547301_R | GTCTCGTGGGCTCGGCCCACAGCCATGACCTTCAT | 60.0 | 0.05 |
| mm4_intergenic_Ano2|Ntf3_chr6_126055505_F | TCGTCGGCAGCGTCAATGCCTCCAGCCCAGAATC | 60.1 | 0.05 |
| mm4_intergenic_Ano2|Ntf3_chr6_126055505_R | GTCTCGTGGGCTCGGGTCCATCCCAAGCTTTGAGC | 59.1 | 0.05 |
| mm4_intergenic_Ctnna3|Lrrtm3_chr10_64086794_F | Primer3: not found at this Tm | N.d. | 0.05 |
| mm4_intergenic_Ctnna3|Lrrtm3_chr10_64086794_R | Primer3: not found at this Tm | N.d. | 0.05 |
| mm3_intergenic_Gm11077|Pde3a_chr6_141099272_F | TCGTCGGCAGCGTCCAAATGAGCAGCCACGGAAA | 59.4 | 0.05 |
| mm3_intergenic_Gm11077|Pde3a_chr6_141099272_R | GTCTCGTGGGCTCGGAACCTCATCCAGATGCCCAC | 59.7 | 0.05 |
| mm4_intergenic_Gm24444|Mgmt_chr7_136551361_F | TCGTCGGCAGCGTCACCAGCTCTTGACTTGTAGACC | 59.7 | 0.05 |
| mm4_intergenic_Gm24444|Mgmt_chr7_136551361_R | GTCTCGTGGGCTCGGATGGATCAGGCTGTGGTGAG | 59.4 | 0.05 |
| mm3_intron_Bai2_chr4_129985619_F | Primer3: not found at this Tm | N.d. | 0.05 |
| mm3_intron_Bai2_chr4_129985619_R | Primer3: not found at this Tm | N.d. | 0.05 |
| mm4_intergenic_Fbxw11|Gm8192_chr11_32752689_F | TCGTCGGCAGCGTCGCCGACCAATCTCCTGCATA | 59.8 | 0.05 |
| mm4_intergenic_Fbxw11|Gm8192_chr11_32752689_R | GTCTCGTGGGCTCGGCTTCCAGTGAGAGCGTGAGG | 60.1 | 0.05 |
| mm3_intron_Gm2093_chr15_4004955_F | Primer3: not found at this Tm | N.d. | 0.05 |
| mm3_intron_Gm2093_chr15_4004955_R | Primer3: not found at this Tm | N.d. | 0.05 |
| mm4_intron_2610034B18Rik_chr7_79927022_F | TCGTCGGCAGCGTCCAGAGAACCCTCAGCCACTG | 60.0 | 0.05 |
| mm4_intron_2610034B18Rik_chr7_79927022_R | GTCTCGTGGGCTCGGAAGGTGAGAGGAGTGAGTGC | 59.0 | 0.05 |
| mm4_intron_Ptpn5_chr7_47086795_F | Primer3: not found at this Tm | N.d. | 0.05 |
| mm4_intron_Ptpn5_chr7_47086795_R | Primer3: not found at this Tm | N.d. | 0.05 |
| mm4_intergenic_Notch1|Gm13358_chr2_26538816_F | Primer3: not found at this Tm | N.d. | 0.05 |
| mm4_intergenic_Notch1|Gm13358_chr2_26538816_R | Primer3: not found at this Tm | N.d. | 0.05 |
| mm4_intergenic_Sall1|Gm6625_chr8_89076015_F | Primer3: not found at this Tm | N.d. | 0.05 |
| mm4_intergenic_Sall1|Gm6625_chr8_89076015_R | Primer3: not found at this Tm | N.d. | 0.05 |
| mm4_exon_Cdk18_chr1_132116595_F | TCGTCGGCAGCGTCCCTCTGGGAGGGAGATCACA | 60.0 | 0.05 |
| mm4_exon_Cdk18_chr1_132116595_R | GTCTCGTGGGCTCGGGGGTGTGACGTCCATCTCTG | 60.1 | 0.05 |
| mm4_intergenic_Sept5|Cldn5_chr16_18727543_F | Primer3: not found at this Tm | N.d. | 0.04 |
| mm4_intergenic_Sept5|Cldn5_chr16_18727543_R | Primer3: not found at this Tm | N.d. | 0.04 |
| mm4_intron_Gli2_chr1_118864993_F | TCGTCGGCAGCGTCGCACCAGCCTAGAGTTTGGT | 59.9 | 0.04 |
| mm4_intron_Gli2_chr1_118864993_R | GTCTCGTGGGCTCGGTACCTGGCAACCCTAGAGCT | 59.9 | 0.04 |
| mm4_intergenic_Zfp704|Pag1_chr3_9635714_F | Primer3: not found at this Tm | N.d. | 0.04 |
| mm4_intergenic_Zfp704|Pag1_chr3_9635714_R | Primer3: not found at this Tm | N.d. | 0.04 |
| mm4_intergenic_Pou3f2|Gm11878_chr4_22495239_F | TCGTCGGCAGCGTCTCAGTTAGCTCCCCTGGTCC | 60.6 | 0.04 |
| mm4_intergenic_Pou3f2|Gm11878_chr4_22495239_R | GTCTCGTGGGCTCGGCTCTTCTGGAGGCTGCAGTC | 60.1 | 0.04 |
| mm4_intergenic_Cnbd1|Gm12393_chr4_19186687_F | Primer3: not found at this Tm | N.d. | 0.04 |
| mm4_intergenic_Cnbd1|Gm12393_chr4_19186687_R | Primer3: not found at this Tm | N.d. | 0.04 |
| mm4_intergenic_Gulo|Adam2_chr14_66023056_F | TCGTCGGCAGCGTCGCTGTGCTCAAGTCTGCAGA | 60.6 | 0.04 |
| mm4_intergenic_Gulo|Adam2_chr14_66023056_R | GTCTCGTGGGCTCGGTAGATAAGCCCTCCCTGCCT | 59.4 | 0.04 |
| mm4_intron_Aff3_chr1_38264534_F | Primer3: not found at this Tm | N.d. | 0.04 |
| mm4_intron_Aff3_chr1_38264534_R | Primer3: not found at this Tm | N.d. | 0.04 |
| mm4_intron_Padi2_chr4_140944189_F | TCGTCGGCAGCGTCTCTGCAAACTGCCCATCCTT | 59.8 | 0.04 |
| mm4_intron_Padi2_chr4_140944189_R | GTCTCGTGGGCTCGGGGACTGGCTGACTGTGTCTC | 60.0 | 0.04 |
| mm4_intergenic_Gstm5|Gm12489_chr3_107906011_F | Primer3: not found at this Tm | N.d. | 0.04 |
| mm4_intergenic_Gstm5|Gm12489_chr3_107906011_R | Primer3: not found at this Tm | N.d. | 0.04 |
| mm4_intergenic_Fut7|Abca2_chr2_25428425_F | TCGTCGGCAGCGTCCGTTCTCCCTAGACCTCGGA | 60.1 | 0.04 |
| mm4_intergenic_Fut7|Abca2_chr2_25428425_R | GTCTCGTGGGCTCGGGCTGCTCACTGGACCCATAA | 59.7 | 0.04 |
| mm4_intergenic_Slc39a10|Gm4852_chr1_47353966_F | Primer3: not found at this Tm | N.d. | 0.04 |
| mm4_intergenic_Slc39a10|Gm4852_chr1_47353966_R | Primer3: not found at this Tm | N.d. | 0.04 |
| mm4_intron_Heph_chrX_96555777_F | TCGTCGGCAGCGTCGGAGAGCTTAAGTGCAGTGGA | 59.7 | 0.04 |
| mm4_intron_Heph_chrX_96555777_R | GTCTCGTGGGCTCGGAAGCTGCACCTCACTCTCAG | 59.6 | 0.04 |
| mm4_intergenic_Irf2bp2|Tomm20_chr8_126818415_F | TCGTCGGCAGCGTCGGAACTGCCTATTGAAGACTCCT | 59.8 | 0.04 |
| mm4_intergenic_Irf2bp2|Tomm20_chr8_126818415_R | GTCTCGTGGGCTCGGATATTGAGCCCAAACCCGCT | 59.7 | 0.04 |
| mm4_intron_Gm5577_chr6_87982628_F | Primer3: not found at this Tm | N.d. | 0.04 |
| mm4_intron_Gm5577_chr6_87982628_R | Primer3: not found at this Tm | N.d. | 0.04 |
| mm4_intron_Kcnq1_chr7_143110046_F | TCGTCGGCAGCGTCTGTGGCTCTTTGAGTTCCCA | 59.1 | 0.04 |
| mm4_intron_Kcnq1_chr7_143110046_R | GTCTCGTGGGCTCGGTCCAAGCAGCTTGACAGTCA | 59.5 | 0.04 |
| mm4_intergenic_Gm12158|Ebf1_chr11_44863366_F | Primer3: not found at this Tm | N.d. | 0.04 |
| mm4_intergenic_Gm12158|Ebf1_chr11_44863366_R | Primer3: not found at this Tm | N.d. | 0.04 |
| mm4_intron_Cers3_chr7_66754177_F | Primer3: not found at this Tm | N.d. | 0.04 |
| mm4_intron_Cers3_chr7_66754177_R | Primer3: not found at this Tm | N.d. | 0.04 |
| mm4_intergenic_Igkc|Rpia_chr6_70741783_F | TCGTCGGCAGCGTCTGTGTTGTGTGGTCTCAGGT | 59.0 | 0.04 |
| mm4_intergenic_Igkc|Rpia_chr6_70741783_R | GTCTCGTGGGCTCGGTGTGCAGATTCCATGTAGCACT | 60.0 | 0.04 |
| mm4_intergenic_Klk5|Klk4_chr7_43870766_F | Primer3: not found at this Tm | N.d. | 0.04 |
| mm4_intergenic_Klk5|Klk4_chr7_43870766_R | Primer3: not found at this Tm | N.d. | 0.04 |
| mm4_intergenic_Tmem196|RP23-307N19.2_chr12_119959078_F | TCGTCGGCAGCGTCACACAGGCTCACAGGAATGA | 58.9 | 0.04 |
| mm4_intergenic_Tmem196|RP23-307N19.2_chr12_119959078_R | GTCTCGTGGGCTCGGCCCACACAGCTTTTGTCCAA | 58.8 | 0.04 |
| mm3_intergenic_Gm22537|Sp8_chr12_118773021_F | Primer3: not found at this Tm | N.d. | 0.04 |
| mm3_intergenic_Gm22537|Sp8_chr12_118773021_R | Primer3: not found at this Tm | N.d. | 0.04 |
| mm4_intron_Sh3pxd2a_chr19_47309257_F | TCGTCGGCAGCGTCAAATCAAGGAGGCTGGGGTG | 59.9 | 0.04 |
| mm4_intron_Sh3pxd2a_chr19_47309257_R | GTCTCGTGGGCTCGGACACTTACTCCGAGCACAGC | 60.0 | 0.04 |
| mm4_intergenic_4922501L14Rik|Gm20389_chr3_154707921_F | Primer3: not found at this Tm | N.d. | 0.03 |
| mm4_intergenic_4922501L14Rik|Gm20389_chr3_154707921_R | Primer3: not found at this Tm | N.d. | 0.03 |
| mm4_intergenic_Atp6v1g3|Nek7_chr1_138474988_F | Primer3: not found at this Tm | N.d. | 0.03 |
| mm4_intergenic_Atp6v1g3|Nek7_chr1_138474988_R | Primer3: not found at this Tm | N.d. | 0.03 |
| mm4_intergenic_Gm13198|Ccdc3/Gm26776_chr2_5201252_F | Primer3: not found at this Tm | N.d. | 0.03 |
| mm4_intergenic_Gm13198|Ccdc3/Gm26776_chr2_5201252_R | Primer3: not found at this Tm | N.d. | 0.03 |
| mm4_intron_Vgll2_chr10_52026865_F | Primer3: not found at this Tm | N.d. | 0.03 |
| mm4_intron_Vgll2_chr10_52026865_R | Primer3: not found at this Tm | N.d. | 0.03 |
| mm4_intergenic_Gm24288|Gm17215_chr8_6285794_F | Primer3: not found at this Tm | N.d. | 0.03 |
| mm4_intergenic_Gm24288|Gm17215_chr8_6285794_R | Primer3: not found at this Tm | N.d. | 0.03 |
| mm4_intergenic_Gm9051|F630028O10Rik_chrX_96232763_F | TCGTCGGCAGCGTCGGCAGGTGGGGTGGTGTT | 62.2 | 0.03 |
| mm4_intergenic_Gm9051|F630028O10Rik_chrX_96232763_R | GTCTCGTGGGCTCGGTCTTGCATGCATACACATGGA | 57.9 | 0.03 |
| mm4_intergenic_Gm25382|Cited2_chr10_17477705_F | TCGTCGGCAGCGTCGGGCGTCCATATCAGAAGGG | 59.9 | 0.03 |
| mm4_intergenic_Gm25382|Cited2_chr10_17477705_R | GTCTCGTGGGCTCGGGCGTTTGCTACCCCACAATG | 60.1 | 0.03 |
| mm2_intergenic_Cyp4f17|Cyp4f16_chr17_32528995_F | Primer3: not found at this Tm | N.d. | 0.03 |
| mm2_intergenic_Cyp4f17|Cyp4f16_chr17_32528995_R | Primer3: not found at this Tm | N.d. | 0.03 |
| mm4_intron_Fam178b_chr1_36656462_F | TCGTCGGCAGCGTCTGGCCATAATCTCCTTCCAGG | 59.2 | 0.03 |
| mm4_intron_Fam178b_chr1_36656462_R | GTCTCGTGGGCTCGGGCAAATGGCCTTCTAGAGACAG | 59.0 | 0.03 |
| mm4_intron_Mfn1_chr3_32572855_F | Primer3: not found at this Tm | N.d. | 0.03 |
| mm4_intron_Mfn1_chr3_32572855_R | Primer3: not found at this Tm | N.d. | 0.03 |
| mm4_intron_Nkain1_chr4_130545254_F | TCGTCGGCAGCGTCGCACAGTGACCTCTCTGCTT | 59.9 | 0.03 |
| mm4_intron_Nkain1_chr4_130545254_R | GTCTCGTGGGCTCGGACAGTGATAGCCTTGGCTGG | 59.7 | 0.03 |
| mm4_intergenic_Htr5b|Ddx18_chr1_121533703_F | Primer3: not found at this Tm | N.d. | 0.03 |
| mm4_intergenic_Htr5b|Ddx18_chr1_121533703_R | Primer3: not found at this Tm | N.d. | 0.03 |
| mm4_intergenic_Fut8|Gm24070_chr12_77806670_F | Primer3: not found at this Tm | N.d. | 0.03 |
| mm4_intergenic_Fut8|Gm24070_chr12_77806670_R | Primer3: not found at this Tm | N.d. | 0.03 |
| mm4_intron_Wwp2_chr8_107496158_F | TCGTCGGCAGCGTCTCCCTGTACTGTTGTCCCCT | 59.8 | 0.03 |
| mm4_intron_Wwp2_chr8_107496158_R | GTCTCGTGGGCTCGGTGGTGACATCAGTGCAGTCC | 59.9 | 0.03 |
| mm4_intergenic_Chd9|Gm6658_chr8_90862366_F | TCGTCGGCAGCGTCATTAAGCAGAGGCCTGGCTG | 60.1 | 0.03 |
| mm4_intergenic_Chd9|Gm6658_chr8_90862366_R | GTCTCGTGGGCTCGGGTTTGAGCAGCCTGTGGTTG | 59.9 | 0.03 |
| mm4_intergenic_Gm26331|Gm24212_chr8_89620963_F | TCGTCGGCAGCGTCAGCCACGAACTATTACAGCTGT | 59.7 | 0.03 |
| mm4_intergenic_Gm26331|Gm24212_chr8_89620963_R | GTCTCGTGGGCTCGGGGTGATGTAGGCTTGCTCAGT | 60.0 | 0.03 |
| mm4_intergenic_Gm16250|5330429C05Rik_chr13_54911937_F | Primer3: not found at this Tm | N.d. | 0.02 |
| mm4_intergenic_Gm16250|5330429C05Rik_chr13_54911937_R | Primer3: not found at this Tm | N.d. | 0.02 |
| mm4_intron_Odf2l_chr3_145146102_F | Primer3: not found at this Tm | N.d. | 0.02 |
| mm4_intron_Odf2l_chr3_145146102_R | Primer3: not found at this Tm | N.d. | 0.02 |
| mm4_intergenic_3110062M04Rik|Wdr91_chr6_34878998_F | TCGTCGGCAGCGTCAGACCTGTGTGGCTGCATAC | 60.0 | 0.02 |
| mm4_intergenic_3110062M04Rik|Wdr91_chr6_34878998_R | GTCTCGTGGGCTCGGAAACCCATGTGGACTCCAGC | 60.2 | 0.02 |
| mm4_intron_Tspan18_chr2_93215973_F | TCGTCGGCAGCGTCCAGGGTTCAGGGCACACTTA | 59.6 | 0.02 |
| mm4_intron_Tspan18_chr2_93215973_R | GTCTCGTGGGCTCGGTAATGGGCCCATCTCTGCAG | 59.5 | 0.02 |
| mm4_intron_Atp8a2_chr14_59869627_F | Primer3: not found at this Tm | N.d. | 0.02 |
| mm4_intron_Atp8a2_chr14_59869627_R | Primer3: not found at this Tm | N.d. | 0.02 |
| mm4_intergenic_Eif4g2|Galnt18_chr7_111221827_F | Primer3: not found at this Tm | N.d. | 0.02 |
| mm4_intergenic_Eif4g2|Galnt18_chr7_111221827_R | Primer3: not found at this Tm | N.d. | 0.02 |
| mm4_intron_Poc1a_chr9_106307480_F | Primer3: not found at this Tm | N.d. | 0.02 |
| mm4_intron_Poc1a_chr9_106307480_R | Primer3: not found at this Tm | N.d. | 0.02 |
| mm4_intergenic_Igbp1b|Gm25434_chr6_139128326_F | Primer3: not found at this Tm | N.d. | 0.02 |
| mm4_intergenic_Igbp1b|Gm25434_chr6_139128326_R | Primer3: not found at this Tm | N.d. | 0.02 |
| mm3_intron_Abca4_chr3_122139965_F | Primer3: not found at this Tm | N.d. | 0.02 |
| mm3_intron_Abca4_chr3_122139965_R | Primer3: not found at this Tm | N.d. | 0.02 |
| mm4_intergenic_Gm8840|Ikzf2_chr1_69482527_F | TCGTCGGCAGCGTCGACAGTGAAGCACCATGGGA | 59.9 | 0.02 |
| mm4_intergenic_Gm8840|Ikzf2_chr1_69482527_R | GTCTCGTGGGCTCGGAGTATATAATGCACTCCATCCCC | 57.3 | 0.02 |
| mm4_intergenic_Fam198b|Gm6706_chr3_80074156_F | Primer3: not found at this Tm | N.d. | 0.02 |
| mm4_intergenic_Fam198b|Gm6706_chr3_80074156_R | Primer3: not found at this Tm | N.d. | 0.02 |
| mm4_intergenic_Ccdc169|Gm22029_chr3_55161489_F | TCGTCGGCAGCGTCGCTAGGCAGCCATTACGCTA | 59.9 | 0.02 |
| mm4_intergenic_Ccdc169|Gm22029_chr3_55161489_R | GTCTCGTGGGCTCGGAAGAACAGAGACACGCCACC | 60.2 | 0.02 |
| mm4_intergenic_Spry1|Gm5148/Rps23-ps_chr3_37698923_F | Primer3: not found at this Tm | N.d. | 0.02 |
| mm4_intergenic_Spry1|Gm5148/Rps23-ps_chr3_37698923_R | Primer3: not found at this Tm | N.d. | 0.02 |
| mm4_intergenic_Nkain3|Gm11871_chr4_20792435_F | Primer3: not found at this Tm | N.d. | 0.02 |
| mm4_intergenic_Nkain3|Gm11871_chr4_20792435_R | Primer3: not found at this Tm | N.d. | 0.02 |
| mm4_intron_Alg5_chr3_54748856_F | TCGTCGGCAGCGTCGTTCACCCCTCTCCTTCAGC | 60.0 | 0.02 |
| mm4_intron_Alg5_chr3_54748856_R | GTCTCGTGGGCTCGGACAGCCTGAGGACCTCTTCT | 59.8 | 0.02 |
| mm4_intron_Vac14_chr8_110665592_F | Primer3: not found at this Tm | N.d. | 0.02 |
| mm4_intron_Vac14_chr8_110665592_R | Primer3: not found at this Tm | N.d. | 0.02 |
| mm4_intron_Msn_chrX_96132725_F | TCGTCGGCAGCGTCCAAACTCGGAAGGGCCTTGA | 60.2 | 0.02 |
| mm4_intron_Msn_chrX_96132725_R | GTCTCGTGGGCTCGGCCTTGCCGATCCACACAGAT | 60.1 | 0.02 |
| mm4_intergenic_AI467606|Qprt_chr7_127106972_F | Primer3: not found at this Tm | N.d. | 0.01 |
| mm4_intergenic_AI467606|Qprt_chr7_127106972_R | Primer3: not found at this Tm | N.d. | 0.01 |
| mm4_intergenic_Ufm1|Trpc4_chr3_54143389_F | TCGTCGGCAGCGTCGCAAAGCAGAAGCAAACCGA | 59.9 | 0.01 |
| mm4_intergenic_Ufm1|Trpc4_chr3_54143389_R | GTCTCGTGGGCTCGGCTCAACCGCTTCTGGACTCA | 59.6 | 0.01 |
| mm3_intron_Clasp1_chr1_118571725_F | TCGTCGGCAGCGTCAATCTCCTGGGCTCCTGAGT | 59.9 | 0.01 |
| mm3_intron_Clasp1_chr1_118571725_R | GTCTCGTGGGCTCGGGTTGATCATGGGCCCTGACA | 60.0 | 0.01 |
| mm4_intergenic_Gm23642|Lrfn2_chr17_48698707_F | Primer3: not found at this Tm | N.d. | 0.01 |
| mm4_intergenic_Gm23642|Lrfn2_chr17_48698707_R | Primer3: not found at this Tm | N.d. | 0.01 |
| mm4_intergenic_F830001A07Rik|Rora_chr9_69105607_F | TCGTCGGCAGCGTCCAATACACGTCAGCCATGGG | 58.9 | 0.01 |
| mm4_intergenic_F830001A07Rik|Rora_chr9_69105607_R | GTCTCGTGGGCTCGGGGCACTTGCTGTCCTTATAGGT | 60.0 | 0.01 |
| mm4_exon_Ace_chr11_105973524_F | TCGTCGGCAGCGTCCTTTGGCTACCTGGTGGACC | 60.3 | 0.01 |
| mm4_exon_Ace_chr11_105973524_R | GTCTCGTGGGCTCGGAGACTGGTAGAGGCAGGAGG | 60.0 | 0.01 |
| mm4_intergenic_Tmem200a/Gm9767|Samd3_chr10_26104666_F | Primer3: not found at this Tm | N.d. | 0.01 |
| mm4_intergenic_Tmem200a/Gm9767|Samd3_chr10_26104666_R | Primer3: not found at this Tm | N.d. | 0.01 |
| mm4_intron_Fmnl1_chr11_103196555_F | TCGTCGGCAGCGTCTTTTGGACAAGGCAGGCTCA | 60.1 | 0.01 |
| mm4_intron_Fmnl1_chr11_103196555_R | GTCTCGTGGGCTCGGCCTGCATCCTCCTAACCACG | 60.1 | 0.01 |
| mm4_intron_Myo7b_chr18_31965840_F | TCGTCGGCAGCGTCGTACCCATCTGTGGTGAGGC | 60.1 | 0.01 |
| mm4_intron_Myo7b_chr18_31965840_R | GTCTCGTGGGCTCGGAGTGTGTACTGCATGCCCTC | 60.0 | 0.01 |
| mm4_intron_Ptprt_chr2_161551407_F | TCGTCGGCAGCGTCTGCCTCTGCACAGGAGTTATC | 59.7 | 0.01 |
| mm4_intron_Ptprt_chr2_161551407_R | GTCTCGTGGGCTCGGATTCCTCATGCCAGGCCTTG | 60.3 | 0.01 |
| mm4_intergenic_Gm13651|Gm13943_chr2_77312942_F | Primer3: not found at this Tm | N.d. | 0.01 |
| mm4_intergenic_Gm13651|Gm13943_chr2_77312942_R | Primer3: not found at this Tm | N.d. | 0.01 |
| mm4_intron_Sh3pxd2a_chr19_47333483_F | TCGTCGGCAGCGTCTAACACTCAGGGAGCCCTCT | 59.5 | 0.01 |
| mm4_intron_Sh3pxd2a_chr19_47333483_R | GTCTCGTGGGCTCGGTTCTGACTGGATGTGGTGCC | 59.9 | 0.01 |
| mm3_intergenic_Ncald|Gm23654_chr15_37369083_F | TCGTCGGCAGCGTCGCAGGATCCCCACTTCTCTC | 59.5 | 0.01 |
| mm3_intergenic_Ncald|Gm23654_chr15_37369083_R | GTCTCGTGGGCTCGGGGCAGAGATTTAGGCCAGGG | 60.1 | 0.01 |
| mm4_intergenic_Gm11923|Gm11925_chr4_29789627_F | Primer3: not found at this Tm | N.d. | 0.01 |
| mm4_intergenic_Gm11923|Gm11925_chr4_29789627_R | Primer3: not found at this Tm | N.d. | 0.01 |
| mm4_intron_Lmo1_chr7_109168344_F | TCGTCGGCAGCGTCGGGAAGAGGTGGAAATGCCA | 59.9 | 0.00 |
| mm4_intron_Lmo1_chr7_109168344_R | GTCTCGTGGGCTCGGGTTATCCCACATGCCCAGCT | 60.1 | 0.00 |
| mm4_exon_Naa40_chr19_7227164_F | TCGTCGGCAGCGTCCGAGAGGCTCCCTGATGTTG | 60.1 | 0.00 |
| mm4_exon_Naa40_chr19_7227164_R | GTCTCGTGGGCTCGGAGTCCTGCCTGTTCTCACAC | 59.6 | 0.00 |
| mm4_intergenic_Mir29b-1/Gm27019|Gm13834_chr6_31083857_F | Primer3: not found at this Tm | N.d. | 0.00 |
| mm4_intergenic_Mir29b-1/Gm27019|Gm13834_chr6_31083857_R | Primer3: not found at this Tm | N.d. | 0.00 |
| mm4_intergenic_Ntrk2|Agtpbp1_chr13_59297058_F | TCGTCGGCAGCGTCCTGGGGCTGGATGCTTTCTT | 60.3 | 0.00 |
| mm4_intergenic_Ntrk2|Agtpbp1_chr13_59297058_R | GTCTCGTGGGCTCGGTGGTAGAGGGAATTGAGGCA | 58.0 | 0.00 |
| mm3_intergenic_Nfic|Celf5/Gm16105_chr10_81455933_F | Primer3: not found at this Tm | N.d. | 0.00 |
| mm3_intergenic_Nfic|Celf5/Gm16105_chr10_81455933_R | Primer3: not found at this Tm | N.d. | 0.00 |
| mm4_intron_Tmcc2_chr1_132358459_F | Primer3: not found at this Tm | N.d. | 0.00 |
| mm4_intron_Tmcc2_chr1_132358459_R | Primer3: not found at this Tm | N.d. | 0.00 |
| mm4_intron_Ppp1r3g_chr13_35967702_F | TCGTCGGCAGCGTCAGGCCTGACTGAGCCTTAGA | 59.9 | 0.00 |
| mm4_intron_Ppp1r3g_chr13_35967702_R | GTCTCGTGGGCTCGGGCTAAGCGCCTTCCTTCAGA | 60.1 | 0.00 |
| mm4_intron_Nhsl1_chr10_18426151_F | TCGTCGGCAGCGTCACTAGAAAGGTGTCAAGGCTGA | 59.0 | 0.00 |
| mm4_intron_Nhsl1_chr10_18426151_R | GTCTCGTGGGCTCGGACCAACCTGGAACCAGTTCA | 59.0 | 0.00 |
| mm4_intron_Mcc_chr18_44436037_F | Primer3: not found at this Tm | N.d. | 0.00 |
| mm4_intron_Mcc_chr18_44436037_R | Primer3: not found at this Tm | N.d. | 0.00 |
| mm4_intron_Iqgap1_chr7_80774700_F | Primer3: not found at this Tm | N.d. | 0.00 |
| mm4_intron_Iqgap1_chr7_80774700_R | Primer3: not found at this Tm | N.d. | 0.00 |
| mm4_intron_Gabrg3_chr7_57027554_F | Primer3: not found at this Tm | N.d. | 0.00 |
| mm4_intron_Gabrg3_chr7_57027554_R | Primer3: not found at this Tm | N.d. | 0.00 |
| mm4_intron_Bcr_chr10_75136802_F | TCGTCGGCAGCGTCTGTCAGGATAGACCAAGCAGA | 58.1 | 0.00 |
| mm4_intron_Bcr_chr10_75136802_R | GTCTCGTGGGCTCGGATGCATGTTCACGGCCTACT | 59.7 | 0.00 |
| mm4_intron_Atp8a2_chr14_59758975_F | TCGTCGGCAGCGTCTGTCCTCCCCTGACAGAAGT | 59.8 | 0.00 |
| mm4_intron_Atp8a2_chr14_59758975_R | GTCTCGTGGGCTCGGCCTGGCACCATTTCCAGACA | 60.2 | 0.00 |
| mm4_intron_9130015L21Rik_chr2_160019771_F | TCGTCGGCAGCGTCTGGCACGCTCTTACGACTTT | 59.9 | 0.00 |
| mm4_intron_9130015L21Rik_chr2_160019771_R | GTCTCGTGGGCTCGGGATGATTTAGTGCCTGCCGC | 59.6 | 0.00 |
| mm4_intergenic_Zfp521|Gm5160_chr18_14006037_F | Primer3: not found at this Tm | N.d. | 0.00 |
| mm4_intergenic_Zfp521|Gm5160_chr18_14006037_R | Primer3: not found at this Tm | N.d. | 0.00 |
| mm4_intergenic_Twist2|Hdac4_chr1_91851435_F | Primer3: not found at this Tm | N.d. | 0.00 |
| mm4_intergenic_Twist2|Hdac4_chr1_91851435_R | Primer3: not found at this Tm | N.d. | 0.00 |
| mm4_intergenic_Tdrd9|Aspg_chr12_112069512_F | TCGTCGGCAGCGTCAGAATCAGCCCATGAGCCAC | 60.1 | 0.00 |
| mm4_intergenic_Tdrd9|Aspg_chr12_112069512_R | GTCTCGTGGGCTCGGTGCCATCCTCTATCGCACTG | 59.6 | 0.00 |
| mm4_intergenic_Sprr1b|Sprr3_chr3_92441721_F | Primer3: not found at this Tm | N.d. | 0.00 |
| mm4_intergenic_Sprr1b|Sprr3_chr3_92441721_R | Primer3: not found at this Tm | N.d. | 0.00 |
| mm4_intergenic_Ppef1|Rs1_chrX_160766314_F | TCGTCGGCAGCGTCTCAGAGACGAAACCACAGACA | 58.9 | 0.00 |
| mm4_intergenic_Ppef1|Rs1_chrX_160766314_R | GTCTCGTGGGCTCGGTGGGGTAAACAGCGGCTAAG | 60.0 | 0.00 |
| mm4_intergenic_Oxr1|Gm26854_chr15_41699340_F | Primer3: not found at this Tm | N.d. | 0.00 |
| mm4_intergenic_Oxr1|Gm26854_chr15_41699340_R | Primer3: not found at this Tm | N.d. | 0.00 |
| mm4_intergenic_Osbpl6|Gm23164_chr2_76476294_F | TCGTCGGCAGCGTCGCGTGAATGTCTGCTGTTCC | 59.8 | 0.00 |
| mm4_intergenic_Osbpl6|Gm23164_chr2_76476294_R | GTCTCGTGGGCTCGGGCAAAGAAGCCAGTGACCCT | 60.5 | 0.00 |
| mm4_intergenic_Mki67ip|Clasp1_chr1_118384007_F | Primer3: not found at this Tm | N.d. | 0.00 |
| mm4_intergenic_Mki67ip|Clasp1_chr1_118384007_R | Primer3: not found at this Tm | N.d. | 0.00 |
| mm4_intergenic_Jhdm1d|Gm26008_chr6_39246985_F | TCGTCGGCAGCGTCGGTTGTGGTCTGAGACTGGG | 59.9 | 0.00 |
| mm4_intergenic_Jhdm1d|Gm26008_chr6_39246985_R | GTCTCGTGGGCTCGGATCTCCAGGCAGACCACTTC | 59.0 | 0.00 |
| mm4_intergenic_Hapln1|Gm8546_chr13_89550253_F | Primer3: not found at this Tm | N.d. | 0.00 |
| mm4_intergenic_Hapln1|Gm8546_chr13_89550253_R | Primer3: not found at this Tm | N.d. | 0.00 |
| mm4_intergenic_Gm6117|Gm13847_chr6_31600111_F | Primer3: not found at this Tm | N.d. | 0.00 |
| mm4_intergenic_Gm6117|Gm13847_chr6_31600111_R | Primer3: not found at this Tm | N.d. | 0.00 |
| mm4_intergenic_Gm24948|Nova1_chr12_46366913_F | Primer3: not found at this Tm | N.d. | 0.00 |
| mm4_intergenic_Gm24948|Nova1_chr12_46366913_R | Primer3: not found at this Tm | N.d. | 0.00 |
| mm4_intergenic_Gm24692|Sptssa_chr12_54335616_F | TCGTCGGCAGCGTCAGGAGCATTCGGATAGCCTT | 58.5 | 0.00 |
| mm4_intergenic_Gm24692|Sptssa_chr12_54335616_R | GTCTCGTGGGCTCGGTCAGAAGCTGCGCAATTGTT | 59.0 | 0.00 |
| mm4_intergenic_Gm24635|Arrdc3_chr13_80861935_F | TCGTCGGCAGCGTCCGTAGGACCAGGTTGCTAGC | 60.1 | 0.00 |
| mm4_intergenic_Gm24635|Arrdc3_chr13_80861935_R | GTCTCGTGGGCTCGGTGGCCTGGATCTCTCAATGC | 59.8 | 0.00 |
| mm4_intergenic_Gm14642|1700021F07Rik_chr2_173442842_F | TCGTCGGCAGCGTCAAAGGCTGGAGGCAGAAGTC | 59.9 | 0.00 |
| mm4_intergenic_Gm14642|1700021F07Rik_chr2_173442842_R | GTCTCGTGGGCTCGGTCTAGGTTCCCGGTGACACA | 60.1 | 0.00 |
| mm4_intergenic_Gm13203|Casz1_chr4_148758833_F | Primer3: not found at this Tm | N.d. | 0.00 |
| mm4_intergenic_Gm13203|Casz1_chr4_148758833_R | Primer3: not found at this Tm | N.d. | 0.00 |
| mm4_intergenic_Gm11809|Chd7_chr4_8685211_F | Primer3: not found at this Tm | N.d. | 0.00 |
| mm4_intergenic_Gm11809|Chd7_chr4_8685211_R | Primer3: not found at this Tm | N.d. | 0.00 |
| mm4_intergenic_Ftmt|Srfbp1_chr18_52385903_F | Primer3: not found at this Tm | N.d. | 0.00 |
| mm4_intergenic_Ftmt|Srfbp1_chr18_52385903_R | Primer3: not found at this Tm | N.d. | 0.00 |
| mm4_intergenic_Fbxo2|Ptchd2_chr4_148181700_F | TCGTCGGCAGCGTCCCACAGCTTGCTCTTAGCTCT | 60.0 | 0.00 |
| mm4_intergenic_Fbxo2|Ptchd2_chr4_148181700_R | GTCTCGTGGGCTCGGGCGCTTCCCGAGATTACAGA | 59.8 | 0.00 |
| mm4_intergenic_Epha5|Gm24626_chr5_84631567_F | Primer3: not found at this Tm | N.d. | 0.00 |
| mm4_intergenic_Epha5|Gm24626_chr5_84631567_R | Primer3: not found at this Tm | N.d. | 0.00 |
| mm4_intergenic_Adamts2|Gm12199_chr11_50680006_F | Primer3: not found at this Tm | N.d. | 0.00 |
| mm4_intergenic_Adamts2|Gm12199_chr11_50680006_R | Primer3: not found at this Tm | N.d. | 0.00 |
| mm4_intergenic_A430105J06Rik|Gm3809_chr1_186949521_F | TCGTCGGCAGCGTCAGGAAGGAACAGGGTCCCTT | 60.1 | 0.00 |
| mm4_intergenic_A430105J06Rik|Gm3809_chr1_186949521_R | GTCTCGTGGGCTCGGCCACCAAACCAGGACAGCTT | 60.4 | 0.00 |
| mm4_intergenic_8430436N08Rik|Gm11795_chr4_7676016_F | Primer3: not found at this Tm | N.d. | 0.00 |
| mm4_intergenic_8430436N08Rik|Gm11795_chr4_7676016_R | Primer3: not found at this Tm | N.d. | 0.00 |
| mm4_intergenic_2410004P03Rik|Kcnf1_chr12_17089463_F | TCGTCGGCAGCGTCGTGAAGCTCCTGTCTGTGACA | 59.9 | 0.00 |
| mm4_intergenic_2410004P03Rik|Kcnf1_chr12_17089463_R | GTCTCGTGGGCTCGGGCTGTCTAGGGACCGCATTT | 60.1 | 0.00 |
| mm4_exon_Tsc22d1_chr14_76506630_F | TCGTCGGCAGCGTCCCAGTTTCAGGCCCAGCTG | 60.9 | 0.00 |
| mm4_exon_Tsc22d1_chr14_76506630_R | GTCTCGTGGGCTCGGCCTAGGAGGCTATGCGGTTG | 59.9 | 0.00 |
| mm4_exon_Trappc3_chr4_126262441_F | Primer3: not found at this Tm | N.d. | 0.00 |
| mm4_exon_Trappc3_chr4_126262441_R | Primer3: not found at this Tm | N.d. | 0.00 |
| mm4_exon_Myh8_chr11_67277209_F | TCGTCGGCAGCGTCTGCAGCATCAGCACTTCTGT | 60.2 | 0.00 |
| mm4_exon_Myh8_chr11_67277209_R | GTCTCGTGGGCTCGGCACTGGGTTCTTGCTGCTTG | 59.6 | 0.00 |
| mm4_exon_Jph2_chr2_163397381_F | TCGTCGGCAGCGTCTATGCCAAGCCCATGTCGTT | 60.0 | 0.00 |
| mm4_exon_Jph2_chr2_163397381_R | GTCTCGTGGGCTCGGCAGGGTGAATACTCGGGCTC | 59.8 | 0.00 |
| mm4_exon_Gm26560/Drd5_chr5_38321020_F | Primer3: not found at this Tm | N.d. | 0.00 |
| mm4_exon_Gm26560/Drd5_chr5_38321020_R | Primer3: not found at this Tm | N.d. | 0.00 |
| mm3_intron_Pik3cd_chr4_149679461_F | Primer3: not found at this Tm | N.d. | 0.00 |
| mm3_intron_Pik3cd_chr4_149679461_R | Primer3: not found at this Tm | N.d. | 0.00 |
| mm3_intron_Cdh13_chr8_118962669_F | TCGTCGGCAGCGTCACCCTGGCTAGGCTGTAAGA | 59.9 | 0.00 |
| mm3_intron_Cdh13_chr8_118962669_R | GTCTCGTGGGCTCGGCCTCCTCCTAACCCTGAGCT | 60.0 | 0.00 |
| mm3_intergenic_Gm12637|Gm22605_chr4_92697398_F | Primer3: not found at this Tm | N.d. | 0.00 |
| mm3_intergenic_Gm12637|Gm22605_chr4_92697398_R | Primer3: not found at this Tm | N.d. | 0.00 |
| mm3_exon_Flnc_chr6_29454412_F | TCGTCGGCAGCGTCCACCCGGAGACTACAGCATC | 59.8 | 0.00 |
| mm3_exon_Flnc_chr6_29454412_R | GTCTCGTGGGCTCGGAACTGACTCGAGCATGGGTG | 60.0 | 0.00 |
| mm3_exon_Flnb_chr14_7927496_F | Primer3: not found at this Tm | N.d. | 0.00 |
| mm3_exon_Flnb_chr14_7927496_R | Primer3: not found at this Tm | N.d. | 0.00 |
| mm2_intergenic_Gm24634|Gm17366_chr14_106631784_F | Primer3: not found at this Tm | N.d. | 0.00 |
| mm2_intergenic_Gm24634|Gm17366_chr14_106631784_R | Primer3: not found at this Tm | N.d. | 0.00 |
These only list off-targets that have primers in the table above. Primers underlined, off-targets in bold.
| ontarget_mm0_exon_5730457N03Rik/Evx1_chr6_52313758 |
CGCATCACAAGGTGACCCTAGCTCCCCACTGCCATCTCCGCGGTCGCCGTCGACACGGCGCTGGGGCTACCCGGCGCCTG CCTTGTCGCCTTAGCTCCTCTTCTCAGCCAAGATCCCAGGGAGCCTGGGATTAGGAGCT |
| mm4_intron_Plce1_chr19_38763148 |
ACTGAACAGCTTCATAGAGATCTGTTTTACATATTGGAGTACCAAATGGGATCTTAGCTAAGAAAAGGTGGTTTAGAGAT TTTAATAGCTAATAATACCACACTTGGAAACAGAGACCGGCA |
| mm4_intron_Nkain4_chr2_180947376 |
TCTCGGGTCACAAAGCACTCATGCCTGCTGGCCCCTAGTGGGTCTGTTGGTGGAGGAAGCCTCTTCTTAGTCAAGTTCCC ATCTCCAAAGATCCCTTCTAATGTTAGCCCTTCGTGATGCTAGC |
| mm4_intergenic_Gm5558|Rchy1_chr5_91869224 |
TCACCAAACACCACCACTCCCTATCTTTACTCAAGTATTAATTTGAAAGAAGTTACCTGAAGTCCCAAATCTGAGTGGGG GATCTTGGCTAAGAAAGGGAAGACACAGACACACCGAACGACCTTGTT |
| mm3_intron_Trem3_chr17_48257171 |
AGACCTGGACACAATGCTGGCCCTGATGTCCAGTGTCACACTTGGATGTTTCTTATCTATTGTGCAGCGTGGGATGCTGG CTGAGAAGTGGATATCCCATCTTTGACCTTCTAGGACCCAATGAACCTCCCT |
| mm4_intergenic_Myb|Gm2467_chr10_21176188 |
GGTCAATGTCTGAGCTTTTACTCATGTTTGAATTGGGAATTTGGTTGAGAAGAGGCCCAAATTAGACTGACATGAAAAAA ATGTATCAAGTATAGTATATACGCCTAAGCAACTATATCCCA |
| mm4_intron_4732456N10Rik_chr15_101561512 |
AACCAGGAAAAGGCAGGTCCAGGATCTCCCCTTCTCAGCCAGGTTCCTGGAAGTCATGCCCTTGTTGGAATAACCCAGGC AGTGACACAGGTCACTGGATCGACAAGGTGACG |
| mm3_intergenic_Il16|Gm7964_chr7_83750299 |
CTGGAGCCACAGAACGAAGAAATGACAGAAGCAGAGCTTACACCAGGTATATATACAAAACAAGTCAAAAGGTGTCAACC CCTTCTCAGCCAAGATCTAAACAGCTGCATCACTGACAAAGTCCCACCATCTCTGTCTCC |
| mm2_intergenic_Hmgb1-ps9|Pik3r1_chr13_101514574 |
GCCCCTTTCATTTTGTCCCCCAAGAGCTCAGCTAAAATCCACAGAGAGTGGCCATTCTTTCACATGCTGGAGGCGGGGTG CAGATTGTGGGCTCTTGGCTGAGAAGCGGTTAAATGTCAGGCTGGAGGCTGAAGAAT |
| mm4_intergenic_2610307P16Rik|Gm17528_chr13_28812728 |
TCCACATTCCTAGCACACACTCCACATCTCAGTCAGAATCCCAGATCTGTACCTCTTATTAAAATATACACACAGGGGGA AAAAAAAACCCACACAGACAGACAGGCAGACATGC |
| mm4_intergenic_Kcnj2|Gm11675_chr11_111108443 |
TGAAAGTCCACAGCTTGGGGGTGATTTCTCCCTTCCTGGGAAATTGATTGAGAAGTGGTCCAGCAGGTTCTGAAATGGAC AGGGAGTGCG |
| mm3_intergenic_Anapc10|Hhip_chr8_79789796 |
CAGAGGATGGTGCTGTGGAATCATGGAAATACCCACCCACTTCTCAGCCACGGTTCCAGGTCTCTTTTCATTCCAGAGGT TTGGATAATAAATGGAATTTCTTTAAAAAAATATTCAAACAGCAGCAAGATGGTCAGA |
| mm3_intron_Neurl1a_chr19_47188986 |
TGAGGCTTGGGGTATAGGCTGGGCTGTCTCTTGGCCACTTCTCAGTCAAGAGTCCAGACGTCCTGTAGGCCTGGTTTATC AGGAGTCATTACCCAAATCCTGCTCGTTTGGAAAATGGCC |
| mm3_intron_Postn_chr3_54364661 |
TGTGCTTTCTGTGAACAAAACCTAAACGTTTTTGTTGTATTTGAAACATCCCCTCAGATAAACACATTGTCCACTTCTCA GCTGAGGTCCCAGGCCACTGTTCTGCAAGCTCGCCCCTTCCCCAGCATGACTTT |
| mm4_intron_Stau1_chr2_166993666 |
ACAGCTGAGAGTTAGTGGAGTTAGTCCTCTTTTGGGGACTCCCACTTTTCAGCCCAGATTTCAGCCTTACTCCTTAAGGA TTGAATCAACAGTTCC |
| mm2_intergenic_Gm5046|Gm23907_chr15_65313531 |
CTTTGCATGTGTGGAAGGGCACACCTGGGATCATGGATGAGAAGGGGAAGATATGGAAACAAACAAATTTGCATGAAAAT GCACAACGAATCAAAGTACTGT |
| mm4_intron_St8sia6_chr2_13722689 |
TTACACAGCCGCCTACAAGGAAATTAACTCTGTCTCCTGCCTGTTGCCAGCTTCTCCATTTCTCAGCCAAGCACTCAGCA AATGAAATATAGAAACTTCTTTTCAGAAGATTCTCTTGCCCTTCCCACTC |
| mm4_intergenic_Dym|Gm20544_chr18_75357786 |
TGACAGCAGCTTCTCTTCCCCCCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNTGACACAGCGACTGGGGACAGAGGGGATAC |
| mm4_intergenic_Gm25076|Gm26455_chr5_118269428 |
GATGAGCTACTGTCTCTCGGCGCCCCCCTTCTCAGCCTCGGTCCCGGCCAGGACAAAGCATAGGTAGATCTTCTTAGCCA TCCTTCAGTGACAGGGATTAGGAGCACGAAGGGACCATTCCCACTACGCCTTCTCTGA |
| mm4_intron_Dlg2_chr7_92244372 |
ACGAGGATGTTGTTTGAGACTGTCTGGAAGATTGGCTAAGAAGTGGATAGCACAGGAGTAATGAATAGTGGCAGGCTTTG C |
| mm4_intergenic_Gm26662|Kirrel3_chr9_34766971 |
GCTCAGTATGCCATGCTGCTGCCTGGAATCATTGCTGAGAAATGGAAGCATAGACTGATCACCAGTGACTNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNGACACTCACACACTCCTGTCATGCA |
| mm4_intron_Endod1_chr9_14361303 |
TCCAGTCCACACTCCTAGGCAACTCCTCACAGTGTGGCCTGCAAACCTGCTGGACTTACCAGGACTGCAACCCTTTCTCA GCTCAGCTCCCAGCTGCTCTTGTTGAGTTTCCATGCCACAAGCATGCAGGTGGCCTTTAT |
| mm4_intergenic_Gm5555|Gpr125_chr5_49921642 |
ACGAACATGGTTCTGTCAAGAATGATTATTCAATTTTCATAATTTTCTTTTTAAAATGTATAGTTTTATATTAGAAATGA GAGGATCTGGGAGATTAGTTGAGAAGAGGAAGAGAATCTACAGGAGTGGGAAGGAGA |
| mm4_intergenic_Tnfrsf11a|Gm26214_chr1_105901356 |
CCAGTTAAGGGCATGGTGCTGAATCGATCAAGAATAGAGGGATCTGGGAGCTAACCTGAGAAGTGGACAGTAGAGCATCT GATGCCAAGATTCCTTGTGGGCCGCATTCCCTCCTCTTCTC |
| mm4_intron_Galnt18_chr7_111499722 | TGAGGTGCTTTTAATGCCCCCAAAGCCACTGGGAACGTGGCTAAGTAGGGGAGGGGTGAGCATATCATAGTGACC |
| mm4_intron_BC006965_chr11_112758088 |
CAGAGTCGGAAAGAGGCCTGGACTCCTGCTCACTCCACTGCAAAATCAGGTCATTTGAGAAAGGGGTGGGGCCAAATCTC AGCCAGGAACCCAGGATGAGAGAACAGGATGTGGTAGGGGC |
| mm3_intergenic_Mir3095|Gm12577_chr4_58468538 |
AGAGGATGGCCCACTCCTTATATAGCCTGGGAAGAAGTAAACAGCCAGTGTCCCCTTCTCAACAAAGTTCCCAGGCAGAG ATATATAACTGTTACTGGCTTAATTTAAAAAGGGGGGCATTGTGTTCTATCTCTTCCCG |
| mm3_intergenic_Gm25875|Gm23835_chr15_60327501 |
AGGGAGCAATTTAGCTGTTGTTGGAGGATAAGTCAGGGATCTGGGCTGAGATGTGGGTGAAAATGGGCACAGCCATTAGC ATTATTTTCTCTCCGGGATCTGGAATGC |
| mm4_exon_Asic3_chr5_24417530 |
CTTCCCACAGCTCCAGGAAGAGTTGAATGGGCATCGAACACATGTTCCCCATCTCAGCCTAGGCCCCAGGTAATATGAAA TATTCCCCATAATGGGGACAGGACAGGTTCA |
| mm4_intron_Fam20c_chr5_138769100 |
CAGGCCAGGTGACAAATGGATCAGAACAGCCTGATGCTGGCCAGGATCTGGGGACAGTAAATGAAAATGACAGCGTATAC ATCCCCTTTTCAGCCGAGTTCCAAGGGCATGGGATCTGGGAGGTGAGTT |
| mm4_intron_Ppap2b_chr4_105159328 |
GGAGGGAAGATTACGGGCTGTGAAAGGCCAGGGGGCTTACAGTAGTAGTTATGGAGATCCAATTCTCTGCTCAGATCCCA GGCGCTCAACCTTAGGATGCTATTCAGAGGACTTGTCACTGGGG |
| mm4_intergenic_Gm12893|Gm12895_chr4_122252503 |
TCCTGGCTTCTAAATGGACACATTAAAACATCATATATTTTGGCCATTTCTCAGCCTAAATACCAGGCTTCATGTGTTAA ACAAAATGAGAAGAGCTGAGAACCACATTCTTTGCCC |
| mm4_intergenic_Gm12892|Gm12896_chr4_122045737 |
TCCTGGCTTCTAAATTGACACATTAAAACATCATATATTTTGGCCATTTCTCAGCCTAAATACCAGGCTTCATGTATTAA ACTAAATAAGAAGAGCTGAGAACCACATTCTTTGCCC |
| mm4_intergenic_Gm12878|Gm12892_chr4_121859555 |
TCCTGGCTTCTAAATGGACACATTAAAACATCATATATTTTGGCCATTTCTCAGCCTAAATACCAGGCTTCATGTGTTAA ACAAAATGAGAAGAGCTGAGAACCACATTCTTTGCCC |
| mm4_intergenic_AC102758.1|Sox6_chr7_115327708 | CTTGTATGCAGGCCTGGGAAAAGAAAGCTGGAAACCTGGCCGAGAAGAGGCCAGTGCGGGTGATCCCCTCCAATCCCT |
| mm4_intergenic_Pbx1|Pbx1/AC096625.1_chr1_168266183 | CTTCCTCCTCCTACCCTCCCCACCCCCCTCTCCTCAGCCACGTTCCCACTCACACCAATGATGCCTGAGG |
| mm4_intergenic_Trap1|Crebbp_chr16_4082376 |
GAACCACCTCAAGTCCCTGGAGCACCCTTTGCATTGATTGTGGGATCTGGGTAGAGAAGGGGGGTCTGAAAAAAAAAGGC AGGAGCCCTCCCCACAGGGGCAGCTGACCAACAAAGAGGAGGACAGGAAGAGTGGG |
| mm4_intergenic_Gm25666|Cib4_chr5_30518373 |
CTGGCTCAGCTCCAGCAGACCGGTTCTCTGCCTAGATTCCAGGCCCGTAGCTATCTAATGCTTCCCCGAGGAACCTTCCA GAAGATCTTCCTGCCATAGACCTTTCCTAAGGAAGAGCTAAAGGGGCCTGATTCTTCCG |
| mm4_exon_Sh2d4b_chr14_40872595 |
CAGGTGCCCCTCATACACACCCACCTTGAATTCCTCGTGTATACGTTCCTCCAAAATTTTAGCAGCCTTGCGGTCCTCCA TCTCCACTTTCCACTTCTCTGCCAGAATCCGAGCTTTCTCATTGGCCAAGGCATCC |
| mm4_intron_Pparg_chr6_115476687 |
CTGGGGAAATGGTGAGCTCTTGTGTAAGATCTGGGATCAGAGCTGAGGAGAGGGGGCTTAGAGGGACCAAAGAGAAAGAC TGTAGATAGAAGTGTCAATCTGACCCAACTGGGGATTTGCTGGGT |
| mm4_exon_Mrto4_chr4_139352452 |
CGCCCAGTGTCCTGAAGGCCACTTCTCTGCCCAGGTCCCGGGTCCCTCCAGTCCCGGCGGCTTCCGAGTCCCGAGCACTC CACCAAGTCCCTCGCGAACCGGTTCCTCTCTATGGCT |
| mm4_intergenic_Gm16087|Gm16086_chr12_106970112 |
TGCCATGAACCCACTGATCAAAGGGAAAGGAGAAAAGCCACTTCTCAGACAGGGCCCCAGGGGGTCTCCAGCCAGGCCAG TCTCTCT |
| mm3_intergenic_Dnajc1|Gm13354_chr2_18403507 |
CACACACACCACAATCAACCACTGATACTGTTTTAGTACAAATGGACAGAATTTCATGTGTTTTTGCATGACTGCTTCTC AGCCAAGATCCTCAAAGCTATACTTTTCACTCTGATATTATCCAGTCCACACCAGCCA |
| mm4_intron_Ccl17_chr8_94811320 |
AGTGTTCCAGGGATGCCATCGTGTGAGTATCCCTCTGTCCCACTCCTCTGCCTAGAACCCAGAGTGGGAAGTGGGTGGGC CTTGGAGTGCCCAGGAAGGCCACTGGGAAAGAAGGAAGAGAGGACAAGCCTGATTCCCC |
| mm4_intergenic_Gm12506|Gm12519_chr4_55714638 |
GTCTCTGAAGTACTGCTGCCAATTGATAGTGAAGTAAGAAGCCATTTCTGATTTCATTTGCATCTTGGATGAGAAGTGGG GCTTTTGAATTATTTCATCAGAGCGTGCAAGAGAGAGCCAGCATGA |
| mm4_exon_C2cd5_chr6_143011926 |
GCATCCCTGCTCCTCAGTACCCCACCCCACGCCGGGCCTCTGGGCTGAGAAGAGGGTGACACACAATGGAGACACATGAA TTTCACTCGGTTGAGCCAGTTGAG |
| mm4_exon_Gm18159_chr6_142110612 |
TGTGGCTCTCTGGTGTTCACTACTGGGAGCTTGGCTGAATTGGGGATTTTGTTGTTGAAAAAGCCAGTGGTGCTTGGGCA TGAAGCTGTGGGAACAG |
| mm3_intergenic_Shisa9|Gm6327_chr16_12514321 |
TCCAGCCTCAGTTACCCACTCATGGGTATTCTGTGTCACAGACTACAAGGAAAGTGCCACCACTCAGCCAAGATGCCAGA GCCGGCCTGCAGAGGCCCTTCCCTCTGTGCTCTAGGCTCTCATTTCAGACGTGCCCTGG |
| mm3_intergenic_Gm22764|Gm4822_chr14_112328008 |
GCCACTGGACTTGGGACTAGTCCAAGACCTTGATCTAGATTATGATTTAGACCTAGACTGTGATCTTGGCTGAGATTTGG AGCTAGATGGTTGTTTTTTCCTTGATTTCTTTTCATACTCAAGCCAGACT |
| mm3_intron_D430041D05Rik_chr2_104155779 |
GCTCCCACAGTCCTGTTTCAGAAGACCCCTTCTCAGGGAAGCTCCCAGATCTTGCCCTGCACGCACCGCTGAGAGCCCTT CCTGAGAAAACCTACAGAGTTTACAGATAAGGGGTTAAATCAGGGGCCCAA |
| mm4_exon_Srsf10_chr4_135863940 |
AGTCTGGCTCAAGATATGAAAAGGAATCAAGGAAAAAAGAACCACCTAGATCCAAATCTCAGTCAAGATCACAGTCTAGG TCTAGGTCAAAATCTAGGTCAAGGTCTTGGACTAGTCCCAAGTCCAGTGGC |
| mm4_intergenic_A4galt|Arfgap3_chr15_83295179 |
CCATGTTGAGGGCAAGTGGATGCAAGCCACACCATGATCTTGGCTGAGATGGGGAACAGGGGCCTGGTTCCTGAGGCCAT TGT |
| mm4_intergenic_Gm16065|Tbx5_chr5_119800812 |
AGACCCTCTCCCTTCCACTGTGGGGACCCCGCTGAACACCCAGGGATTTGCTTCTGGGGACTTGGCTGAGACAAGGGACC ACCAGCGCCCACTGGAAATTC |
| mm4_intron_Epb4.1l4a_chr18_33974243 |
GCAGGTACCTGAGAGTGACCTTTGTATGTGTTTCAGATTGTTATTTAATGGTCATCTGTAGTCCCCCCCCCCATTTCATC CACGATCCCAGAATCCCAGCTGTCTAATTCTATTCAATAAGGAAGGAATACCCTGTAGCC |
| mm4_intergenic_Plac8|Coq2_chr5_100629043 |
GTCAGCTCCCTCGCTCTTTTTGATAAGGTTCTGGGAACTGAGCTCAGAAGTGGTCTATATATGTGTTTATCTGCTGAGTT CTCTCTCTCTCT |
| mm4_intron_Syk_chr13_52596293 |
CAGTGAACTCGCTCCCTTGTACCTCAGAACCCACCTCTCAAAGGTTATGACACTCGAATGTGCCACACCTTAGCCAAGCT CCCAGCACATGAACCCTGGAGCGGCATACCCAAACCCCGATGA |
| mm4_intergenic_Btg2|Gm8618_chr1_134084261 |
GAAGAGACATGGCTGCCCTTGCTGCCATTGCTGTCTCAACCTGGGAGCCTTGCTGAGATGTGGGCAAAAATGTGAGTCAA GAAAGGCCACGACTCTCTCTACA |
| mm4_intergenic_Sec16b|Brinp2_chr1_157755196 | GGGGAGAGACAGAAACCAGCACTCGGTATCTTCGCTGAGAAGTGGAGAGCAGTATCTGGCTCCGAGTGTTGAAC |
| mm4_intergenic_Snx19|Adamts15_chr9_30707346 |
GCCAGGATCCAGTCTGCTTTTTAAAAACAGTGCTTAATACTGAATACCAAAATTACACAAGATTTCAGACTCCCCAACCC CCTTCTCTGGATAGATCCCAGTAATTTCCATAATGAAGCAAAACTGAGAAAGACCCT |
| mm4_exon_Rmnd1_chr10_4402634 |
CGGCCAAGGCACAAAATGAATGCTCCATTGTAGTGTATGCAAAGCAGTACTGGATGAATGTACACACACACACACACACA TGAACAGTGGGATCTTGGCAGAGTGGGGGGGGGGCAGAGCTATGACTAAAA |
| mm4_intron_Sh3kbp1_chrX_159874116 |
GCTCAATGGCTAAAATGCTGCATAAGTAAGGGTAACTTTAAAAGAAATACATCATAATTAAGTATGAGTCTACTGGCTGC CATATTTGCTGAGAAGTGGTTGTGATTGGAGTGTTGAAATGTCATTGCT |
| mm4_intergenic_Tcf7l2|Gm22271_chr19_56195973 |
TACCCACAATCCCCACTTGCTGGATGCCTGAATCTCTGGGTCCTCTGCTGAGAAGTGGGACCACTTGCCCTCTATTGGGT GCAGAGCTCAGC |
| mm4_intergenic_A930031H19Rik|Gm25261_chr4_131141751 |
CGACCTTTGCTCCTAGGGTCCCCTTCCTCGGCCATGATCCCAGAGGGGAAGCAAAAGGAAGTGAACCCCTATATATTCAC CTTTTAGCCCCTTATCAGCTACGGTC |
| mm4_intergenic_Kcnip1|Kcnmb1_chr11_33960993 |
CTTCCCCTGTGGCCATCATTACTCATACTAACCCCAACCCTCCCGTACTCAGCCATGATCCAAGATTTTCACTAGCTTAC CCTAGAGGCAGAGCGAAGCTTG |
| mm4_intron_P2rx3_chr2_85003023 |
CCATGTCAGCGACTGTGTCTACTGGACACTGTCCCTCTCTGCCCCATCTCTGCCCAGCTCCCAGCCCAGGGTGCCTGTCT CTTGCTAT |
| mm4_intron_4933440M02Rik_chr7_125334973 |
TGGCAACTGTCCAATTCACCCCAGTCCTCAGCCAATTTCCCAGTCTCCATTCTTGGCATCTATCCTATGTACAGCCTTCT TACGACAAACTTGGTGTCTACTTAGTGTCATCCTGACCAAGCAATGGCCAAGCATCC |
| mm4_intergenic_Gm25169|Efnb2_chr8_8095666 |
GCTGGAGTCAGGTTTCCTCGTCTCCACTGCTCAGCCTTCATCCCAGACATTTTAGATTTGTTTTTGGACACAGGCACATA CAGACATCAAGCAGTGTGTCTCCATCCTAACACTGCCATCAACACATGTGCA |
| mm4_intergenic_Gm23835|Fam84b/9930014A18Rik_chr15_60748955 |
CCCACAGCATCTGATGACGAGCAAAGCTTCATTATTGTTTCCTACAGTCATCTTGGATGAGAAGAGGCCAGTAAGCTCTG GTGAGAATTTAACCTTTAACCAAGTCTGTCTTTGCATATAAGTACAGCTATCCAAGGGCG |
| mm4_intergenic_Tcf7l2|Gm22271_chr19_56034871 |
AAGTCCTCACACAGAAGCCGACCTCTTCCCAGCCAACTTCCCTGCAGGCTATTATTTCTGGACATCACCTCACATTTCCA CGAGTGTACAAAATTATCTTCAGGTGTATTCTGCAGATTTCTTGCTCTACCTCATGGCCA |
| mm4_intergenic_Rragc|Gm12916_chr4_123950600 |
CTGGTTCTAAAGCCGTGGGTTTATTTAGGGGCAGAGGCCTCTCCTCAGCCCAGAGCCCAAGCATTTCTTTGGCCTCTGAG TAGTTTCTTGAGAGTCTCTTGGACAATTGGTCTGGCAATGGATGCCCTGCTTTGG |
| mm2_intron_Fggy_chr4_95686167 |
GTCCTTATACCCTGGCAGCCAGAGCTCTGGGATCTGGGTTGAGAAGGAGCCGAGGGCTGACTTGCAATGCCATAGATCCT TACTTATTCTCTTTCAGGATGCTTTTACCCTTAACCATCTTCCTGCTGTGTGG |
| mm4_intergenic_Arhgap25|Prokr1_chr6_87554095 |
CCAAGAGAATGGGTGCAGCTGTAAGCACCGCCTTTTGCAGCTCTTTACAACTTCTGTGGGATCCTGGCTGAGCTGGGGGA AGGGTGTTGGTTCCTGAGGGTGGTGCTTCTGAG |
| mm4_intron_Myo18a_chr11_77808822 |
GACCTAGCCACCCTGCATTTTTGTACGGACCCTCCCCCTCCCCTTCTCTGCACAGACCCCAGCTTCTGAAGTAAGAAGGT TTCCTCTTCGAGTCTTTGCCATCTTCCCTTGCCT |
| mm4_intergenic_Eif4g2|Galnt18_chr7_111083452 |
CTTTTCCTCGCCTCTCCTCCCTGACCCGCCCGGGCCTGGCGTCCTGAGGGCTCGGCGTGGCCTTGCGGCCTGGCCTCGGT TTAGCGTCTGGGAGCTTTGCTGAAGAGAGGGACGTGTGCCCATCGATAGGAA |
| mm4_intergenic_2410089E03Rik|Nipbl_chr15_8288238 |
TCACTAGAAACTCGGCTTCGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNATCCTTAGCCACCACGTGTAA |
| mm4_intron_Nkd1_chr8_88538571 |
TACAGAACGGAGTCTGTGCCCAGAGCCTTCTGGTAAATATTTTGGGAAGTTGAATTCAGCTGGCATCATGGCTCAGGAGT GGGTAGTGGGTGCTGTTCAGGACTAGATGGTTGAATCTGGACCCTTCTCACACAGTGC |
| mm4_intron_Pot1a_chr6_25782011 |
TGGTACACCTACACTGGCATAGTCAAAGTCCCCTTCTGAGCCAAGATGACATCAACTGAAAAGCAAGTCAGTCATTGGCT CTTTGTAAAAAGCAAACATAGAACAAAGGTACACCCATGAGCACATTTAGCTGGCCA |
| mm4_intergenic_Gabrb2|Gm25543_chr11_42837548 |
TCAGACAAAAGAAACACTGTCCAAAATAATCAACAGAGAAATAGATTGTTTTTCTTATCAAACATTTGAGAACATGGGAG CTTGGGTGAGAAAGGGTATGGTGATAAGTGAGGTTAGCCAGGCATTCAGGACAAGGT |
| mm3_exon_Fermt1_chr2_132905936 |
TTTCTTGAGACCCAGCCCAGGACCAAATCGACTGAGTCTTGGATCTTGGCTGAGACTGGGCTCCCACTTATCCCTTCAGC ACCTGTGTCTT |
| mm4_intergenic_Lrrc7|Gm9423_chr3_158714549 |
ACCAAGATAATCCTGTGTTCCATCTAATCTCCAGGGGACTTGGGTGAGAAGAGGGAGGACAAACTAATAAATCTGTTGCA TCTGTAATACTGCTAATTTTATGTTAGACTAACAAGCCATGGTCACTAGTAATTGGC |
| mm4_intron_Mei1_chr15_82119846 |
ACAGCAAGGGCCTTACCATCTTCTCAACCGCCAAATATCAGCTTTGATGCTGTTAACCCCATAGCACAGCATAGCTGGGA TTTAGGGTGAGAATGGGCTTATTCCATGATCTGAAAGTCTGGCAAGGAGCACAGAT |
| mm4_intergenic_Gm15189|Rps6ka3_chrX_159170036 |
CACTATTCCCACGTCTAGCTCATAATCACCACTTCCCAGACATGATCCCATCACCTCTTTCACACCTGCCAGTTGAATGC |
| mm4_exon_Ahsa2/Usp34_chr11_23488393 |
GCAGCAGAGAAACTCACTCCAAGAGCAAGAAGCCAAAGAAAGAAAAACTAAAGGTTAGCTGTATCAACTAAGTCTTGCCT GGGATTTGGGCTGAGGGGTGGCTGGGAGGATGAAGACAAGCTTGGAGGTGTGG |
| mm4_intergenic_Aurkaip1|Gm10562/Mxra8_chr4_155835131 |
CACACAGAGTCAGACCTGGGGATGAGATTCTTATTCCCCTACCCAACCAAGATCTCAGCAGACAATTGGAGGATTATGTC TTTTATCTTTGCATCTCCTCCCAGGTCACAAGTCCTTCC |
| mm3_intron_Ints7_chr1_191598811 | CACCGTGAGATCCTGTTGCTCTGGCCTGTTGGCTGAGAAGAAGAGTGTAGTCAGCTGCATGCTTTACCAATGA |
| mm4_intron_Col23a1_chr11_51547301 |
ACAGTCTCTCTGAGGCCCATAAAGGGGTTTACTTCCAAAGCCTAGGAATACCTCTCTTACCCAGGTCTCAGCCATGAACC CAGAACCACCTCTGCAGATGAAGGTCATGGCTGTGGG |
| mm4_intergenic_Ano2|Ntf3_chr6_126055505 |
AATGCCTCCAGCCCAGAATCTATCAACCTCATCCCAGCCAAGAAGCCAGATTGCAAATGGGTAAATGAGCTCAAAGCTTG GGATGGAC |
| mm3_intergenic_Gm11077|Pde3a_chr6_141099272 |
CAAATGAGCAGCCACGGAAAGCCATGGGAATTTAGAAAAACAGTTAGTATTATGTGATTGTTAGACAAGACCAACGGAAC TGACTTTTGGTGCATGGAATCTTGACTGAGAAGCGAAGTGGGCATCTGGATGAGGTT |
| mm4_intergenic_Gm24444|Mgmt_chr7_136551361 |
ACCAGCTCTTGACTTGTAGACCTTTCCACCTCAGTATAGGAAGCTTGGCTCCTCTTCTCACTCCAAATCCCAGCTTGCCA GCCCCATGCCTCCTACCTCAGGGAATGGCTCACCACAGCCTGATCCAT |
| mm4_intergenic_Fbxw11|Gm8192_chr11_32752689 |
GCCGACCAATCTCCTGCATACACAAGTGAGATCAGGCCACTTCCCTGCCAACACCCCAGTGGCTCCCACTATCCTCACGC TCTCACTGGAAG |
| mm4_intron_2610034B18Rik_chr7_79927022 |
CAGAGAACCCTCAGCCACTGCCTTGGCCTCACCTCCTCAGAGCTGGCTCCAGAGCCCATCCAGCAACCCCACCACTTGTC AGCCGGGAGCCCAGACCCACCGCACTCACTCCTCTCACCTT |
| mm4_exon_Cdk18_chr1_132116595 |
CCTCTGGGAGGGAGATCACAGTGGGGAGCAAGGGGCCTGGCAAGGGACTACCTGGGGGCGTGGCTGAGCAGTGGCTGTGG TAGGTATCGGGGGAAGTTGTAGGCTCGAAACTCAGAGATGGACGTCACACCC |
| mm4_intron_Gli2_chr1_118864993 |
GCACCAGCCTAGAGTTTGGTGGTGGTTCCCCACGCCTCTACTCAGCCCACATACCAGGCATCCTTGGACAGCTCTAGGGT TGCCAGGTA |
| mm4_intergenic_Pou3f2|Gm11878_chr4_22495239 |
TCAGTTAGCTCCCCTGGTCCTGGGAGCAGGGCTCCCTCTTCTCAGCCAAAATAAAAGTGCCGCCGAAGGCTTGGCACTTT TTACCAGAGAACCGACTGCAGCCTCCAGAAGAG |
| mm4_intergenic_Gulo|Adam2_chr14_66023056 |
GCTGTGCTCAAGTCTGCAGATGGAGAATATCTTTGAGCCTCAACACAACTCATCTTGTCCGGAGGGGAGAGCTCTGGGGT CCTGGCTGGGAGGAGGGAGGCAGGCAGGGAGGGCTTATCTA |
| mm4_intron_Padi2_chr4_140944189 |
TCTGCAAACTGCCCATCCTTTTGGAGAACCCCTTCCCTGCCACCATCCCAGGCCACTTTGGGGCCTGTACTTGGATCTGA TGATGTTGCCCAGGATACAAGAAGAGACACAGTCAGCCAGTCC |
| mm4_intergenic_Fut7|Abca2_chr2_25428425 |
CGTTCTCCCTAGACCTCGGAAAGGTGCGAGCCGGGATCTTGGTTTAGATGGGGGCTGTGAGGGATCTTGGAAACACTGCA TTATGGGTCCAGTGAGCAGC |
| mm4_intron_Heph_chrX_96555777 |
GGAGAGCTTAAGTGCAGTGGAATGTAGGAAGTAACCTCTCCCCATCACTTCTCAGCCAAGATTTCTTTGATCTGAGAGTG AGGTGCAGCTT |
| mm4_intergenic_Irf2bp2|Tomm20_chr8_126818415 |
GGAACTGCCTATTGAAGACTCCTTGAATACTTCCTACAGCCCCCATCTCTGCCAAGAGACCAGTCATGTCCCTTGTGTGA ACAACAAAAGCCAGTAGTGAGGCTGAGCGGGTTTGGGCTCAATAT |
| mm4_intron_Kcnq1_chr7_143110046 |
TGTGGCTCTTTGAGTTCCCATAGAGAGCAGCCCCCTTCCTAGCCAAGGTCACAGGGGTCCAGCTGCCTTGCTGTTGGGCC TTGGCCAGGGTTGGGGGCAGATGTTCCAAACTATCTACTCTGACTGTCAAGCTGCTTGGA |
| mm4_intergenic_Igkc|Rpia_chr6_70741783 |
TGTGTTGTGTGGTCTCAGGTTCCTCTCCTCGGGCAAGAACCCAGTTCAAGTCCCAGAATAGGAAGCATTGCTAGCTACAG TATAAAGTGCTACATGGAATCTGCACA |
| mm4_intergenic_Tmem196|RP23-307N19.2_chr12_119959078 |
ACACAGGCTCACAGGAATGAAGAAAGTCACTGCTACAGCAGGTAGCAATAATACTTGATAGCCTGGGCACTGTGACCTAG GCTGAGCAGAGGTGAGAGGAGAGCAAAAGATAATGGGGATTTGGACAAAAGCTGTGTGGG |
| mm4_intron_Sh3pxd2a_chr19_47309257 |
AAATCAAGGAGGCTGGGGTGCACAAATCACCTGGTGTAAACGAGCTGCCATCTTGGATGATAAGAGGAGGATTCACTGGT GTGCAGTAAAGAGAAGTGCACAGCTGTGCTCGGAGTAAGTGT |
| mm4_intergenic_Gm9051|F630028O10Rik_chrX_96232763 |
GGCAGGTGGGGTGGTGTTGTGGGAGCTGGGGTGAGAAGTGGGGAGTAAATATGGTTAAAATCCATGTGTATGCATGCAAG A |
| mm4_intergenic_Gm25382|Cited2_chr10_17477705 |
GGGCGTCCATATCAGAAGGGCAATGTTGTCGAGGTTCCATGGTCCCCACTCATCAGCCCAGAACCCAGAACCCAAAGAGA ACTGGTTAACTAAAGCAAGCCAATAACCATTGTGGGGTAGCAAACGC |
| mm4_intron_Fam178b_chr1_36656462 |
TGGCCATAATCTCCTTCCAGGAAGTTTTCAGTTAAGACTGTGGTTTTTGTGTACCTATTCCCCCATGAGACAGAGCTCTG TGAACTTGGCTGATAACTGGTCTGCTTTATCATCTGTCTCTAGAAGGCCATTTGC |
| mm4_intron_Nkain1_chr4_130545254 |
GCACAGTGACCTCTCTGCTTTGATGCAGGTATATGGTGTCCCCTGCTTCTTTCTAGAATCTCAGCAGCCCTCCTCCCAGC CCAGATCCCACTGGAAGCCAGCCAAGGCTATCACTGT |
| mm4_intron_Wwp2_chr8_107496158 |
TCCCTGTACTGTTGTCCCCTGGCGATGGGCAGGGGTTCCAAAGAGAGGCCTTAATGGAAGAGGTCCTGGGAACTGGGGTG AGATGGGGCACCGTGCAGGGACTGCACTGATGTCACCA |
| mm4_intergenic_Chd9|Gm6658_chr8_90862366 |
ATTAAGCAGAGGCCTGGCTGCCTAGGAGCTGGGCTTAGAAGTGGATAGTGCGGGGCTCCCAGGGTAATGACATGGCCCCT AGCAACCACAGGCTGCTCAAAC |
| mm4_intergenic_Gm26331|Gm24212_chr8_89620963 |
AGCCACGAACTATTACAGCTGTAAGAGAATTTACAGAGTGTCTGTAATGGCTGTCCTCTTGGCTGACAAGTGGGGAAACT GAGCAAGCCTACATCACC |
| mm4_intergenic_3110062M04Rik|Wdr91_chr6_34878998 |
AGACCTGTGTGGCTGCATACAGAGCCTGTTGTCAGCAAAGACCCCAGCAGCAGGAGGGAAAGACCAAGCTAGGAGACTTG CCTGTGCTGGAGTCCACATGGGTTT |
| mm4_intron_Tspan18_chr2_93215973 |
CAGGGTTCAGGGCACACTTAGCCGAGGCTGGCAAAGCAGCCAAGCACAGCCTGCTCTCAGCCAAGAGCACAGGCTGCCTT CCGGGCTTGGCTGCAGAGATGGGCCCATTA |
| mm4_intergenic_Gm8840|Ikzf2_chr1_69482527 |
GACAGTGAAGCACCATGGGACTGTACCTAATCTGCTGATAGTTCTTTCACAGCAAGGACCACTGCTCTGCAGAGATCCCA GTCTCTTGGGGGATGGAGTGCATTATATACT |
| mm4_intergenic_Ccdc169|Gm22029_chr3_55161489 |
GCTAGGCAGCCATTACGCTATTTTCTAAGGTCTCTAGAACAAGCCCCATCTCCTGAGGGACTTTGTCCTGTTTGGGTGAT TGACAGGCCTGCTTGAATCTTTGCTTAGAAGGGGAAGTGGTGGCGTGTCTCTGTTCTT |
| mm4_intron_Alg5_chr3_54748856 |
GTTCACCCCTCTCCTTCAGCCAGGCCTCCTCTGTGTTCCATTAGATTCCCTCCTGCTGTTTTTCCAGACTCTTCTTTGAG TCTTCAGTGGGCCTCTTCTGACCCAAGGTTCCAGTAGAAGAGGTCCTCAGGCTGT |
| mm4_intron_Msn_chrX_96132725 |
CAAACTCGGAAGGGCCTTGAAAAGTAGTTCTTACTTTCTGATGGCCAGTCCCCTTCTGACCCAAGAAGCCAGAATCTGTG TGGATCGGCAAGG |
| mm4_intergenic_Ufm1|Trpc4_chr3_54143389 |
GCAAAGCAGAAGCAAACCGATGAACCCTTCCTCTTTCTCTGATGCAGATAACTTGACTCTTGGATCTTGGCTGACAGCAG GATGAGTCCAGAAGCGGTTGAG |
| mm3_intron_Clasp1_chr1_118571725 |
AATCTCCTGGGCTCCTGAGTCAGGCTGCTGTGATCTGGTCTGAGAAGGAGAAGGAAGTGAGCAAGCAGGCAGCAGTCTGT TCATAACATCATGGACTTAGCTGTGGATGGGTGTGGATGTCAGGGCCCATGATCAAC |
| mm4_intergenic_F830001A07Rik|Rora_chr9_69105607 |
CAATACACGTCAGCCATGGGCTGCCTACATTTTCTTCAAGACAAAGGATGTCTTCATGATCCCTAAGAATGACAAGTCAC TGGGCTCTTTGCTCAGAGGAGGCAACTGACCTATAAGGACAGCAAGTGCC |
| mm4_exon_Ace_chr11_105973524 |
CTTTGGCTACCTGGTGGACCAGTGGCGTTGGGGGGTCTTCAGTGGACGGACCCCACCCTCTCGCTACAACTTCGACTGGT GGTATCTTCGGTGAGAAGAGGCTCACCCAGGGCACCTCCTGCCTCTACCAGTCT |
| mm4_intron_Fmnl1_chr11_103196555 |
TTTTGGACAAGGCAGGCTCAGGTATGGGGCGCTGGGGTCTTGGGTGAGAGCAGGGAACTCAGTCCTTGGGCCCCTGACGT GGTTAGGAGGATGCAGG |
| mm4_intron_Myo7b_chr18_31965840 |
GTACCCATCTGTGGTGAGGCCCTGTGCTGTGCCAAGGCCAAACAAACACCTCAGAAGCAGAAATGGGACACTTGGGCCCG TGGGTTTGGGAGCTTGGGTGGGAAGCGGGGAGGGCATGCAGTACACACT |
| mm4_intron_Ptprt_chr2_161551407 |
TGCCTCTGCACAGGAGTTATCTGAGGACTCATTTGAGATACACCAGAAGGAACTCCAAGATGCTATACTACCTCTTGTCT CCCAAGGTCCCAGACCAAGGCCTGGCATGAGGAAT |
| mm4_intron_Sh3pxd2a_chr19_47333483 |
TAACACTCAGGGAGCCCTCTGGAATCTGGAATCTGGGGTGAGCAGGGGAGACCCCAGAGAGGAAGGAAAAGCTGCCCCCC AGACCACAGACTCCCAAGGCACCACATCCAGTCAGAA |
| mm3_intergenic_Ncald|Gm23654_chr15_37369083 |
GCAGGATCCCCACTTCTCTCTTAACTCAGACATCCCCCACCTGACTCAGTGCACAGGGCCGTTCAACACCACTTCCAAGA CAAGATCCCAGGCTTGGGGAGGGTACTGGCTCACCCTGGCCTAAATCTCTGCC |
| mm4_intron_Lmo1_chr7_109168344 |
GGGAAGAGGTGGAAATGCCATCTTGCCAACAAATAGTTAATCTTCCTAGACTGATGGCTCCCTCATACAAAACTCAGGTC TTCTGGGTTCTTGGCTTAGACCTGGGGAGCTGGGCATGTGGGATAAC |
| mm4_exon_Naa40_chr19_7227164 |
CGAGAGGCTCCCTGATGTTGTTCCCCTTGAGACTAAGAACAGAGGTATCTGGGCTGAGAAGAGAGGTGTGAGAACAGGCA GGACT |
| mm4_intergenic_Ntrk2|Agtpbp1_chr13_59297058 |
CTGGGGCTGGATGCTTTCTTACTACATGCTAGTATTGATAACCTGGTAGCTTGGGTGACAAGGGGTGGAGTCTAAGTCCT GTCAGTTGCCTCAATTCCCTCTACCA |
| mm4_intron_Ppp1r3g_chr13_35967702 |
AGGCCTGACTGAGCCTTAGAGGGTCTGGGATCCTTGCGGAGGAGAGGTGGCAGTTGCAGGCCAGGCGCAGGCTAAGCGAG AGGGGGGAATGAATGCCTTCAAGTCTGAAGGAAGGCGCTTAGC |
| mm4_intron_Nhsl1_chr10_18426151 |
ACTAGAAAGGTGTCAAGGCTGACCTAGCTTCAATCAAAAGAGCTGAAAGCATTCATCTGGGGTCTTGGCTGTAAAACGGG ATTTATTTTGTCTCTTGATTACAGAGGTTATGAACTGGTTCCAGGTTGGT |
| mm4_intron_Bcr_chr10_75136802 |
TGTCAGGATAGACCAAGCAGATCAGTTAAGGTCTACCTTTGTGACCTTATCTAATCCTATTCACATCAAAGATCCCAGCT CCAGTCACCGTGAACATGCATAGTAGGCCGTGAACATGCAT |
| mm4_intron_Atp8a2_chr14_59758975 |
TGTCCTCCCCTGACAGAAGTTAATGTTCTCAGCCTATTTTCTCCTGAATTTATGCCTGGGAGCATGGCTGTGAACAGGTT GTCTGTCTGGAAATGGTGCCAGG |
| mm4_intron_9130015L21Rik_chr2_160019771 |
TGGCACGCTCTTACGACTTTAACAACTGTGTTCTTGGCTGTGCAGTGGTATTCCCACTTTGCGGCAGGCACTAAATCATC |
| mm4_intergenic_Tdrd9|Aspg_chr12_112069512 |
AGAATCAGCCCATGAGCCACCACGAACATCACAGAGGCGACTGACTGGGAGCTGCTGGTGTCTTGACTGTGAAGGGGACC AGGGAAAACTGAACAGTGCGATAGAGGATGGCA |
| mm4_intergenic_Ppef1|Rs1_chrX_160766314 |
TCAGAGACGAAACCACAGACACCTCGTCTCCACCAAGGTCCCAGCCGTTGTCACCAGAACTCCCAGAGTGGAAGCAGAGC GATTCAGAGCCTTAGCCGCTGTTTACCCCA |
| mm4_intergenic_Osbpl6|Gm23164_chr2_76476294 |
GCGTGAATGTCTGCTGTTCCTTTCTTTCTGGCACAACCCAGCCTTAGGACTATGAGTCTGTTTACACGGTGAGACCTTTT GGGATCTTGGCGGTGATGTGGTCCGGGTGAGGGTCACTGGCTTCTTTGC |
| mm4_intergenic_Jhdm1d|Gm26008_chr6_39246985 |
GGTTGTGGTCTGAGACTGGGCACAGCGGGAGTTCACAGCTCCTCACAGGTGGGTGGAAAGAAGAGGCCACTGGAGGATGG AGACAACTTGGTCAAGGTTCTTGGCTGTGAAGAGGGAAGTGGTCTGCCTGGAGAT |
| mm4_intergenic_Gm24692|Sptssa_chr12_54335616 |
AGGAGCATTCGGATAGCCTTTAAAACCAGATTAACCCATTCATAGCCAAGATCACAGAGGTCCAGGGTAAATGTGCAGAT AACAATTGCGCAGCTTCTGA |
| mm4_intergenic_Gm24635|Arrdc3_chr13_80861935 | CGTAGGACCAGGTTGCTAGCACTCTGTGATCTTGGCTCCGAGGAGGGCAGAGCAGAGCATTGAGAGATCCAGGCCA |
| mm4_intergenic_Gm14642|1700021F07Rik_chr2_173442842 |
AAAGGCTGGAGGCAGAAGTCTATCAAGGTTCCCCTGCACAGCCAGAATCCCAGAGCAGAAAAGGAGTCCAGGATAGATAT GCAAGAAGCACAAATGTGTCACCGGGAACCTAGA |
| mm4_intergenic_Fbxo2|Ptchd2_chr4_148181700 |
CCACAGCTTGCTCTTAGCTCTCCAGAACTGTGAGTCACACAAGTCCCCTTTCTCCGCCAAGCACCCAGTACCAAGTACTT TTTTTTCATAATAATAGGAAGAGAAAAAACAAAAAGACCATCTGTAATCTCGGGAAGCGC |
| mm4_intergenic_A430105J06Rik|Gm3809_chr1_186949521 |
AGGAAGGAACAGGGTCCCTTCACCTCTGGAATCAAGGAGCTTGTCTCAGGCCACCCTGACACTCGCTGGGAGCTTGGGTG CTAAGTGGTGATGCTAAGTTAAGGGCACTATTAGATTAAGCTGTCCTGGTTTGGTGG |
| mm4_intergenic_2410004P03Rik|Kcnf1_chr12_17089463 |
GTGAAGCTCCTGTCTGTGACAGGCCCTCACTGGGATCTTGGCTCCGCTGGGGAGACAGGGCGCACGGCTGCCTGGGGAGG GGATGGGAACAGGGCGAGCAGTGGGGTAAATGCGGTCCCTAGACAGC |
| mm4_exon_Tsc22d1_chr14_76506630 |
CCAGTTTCAGGCCCAGCTGCAGACTGGCTCCCCTCCGGCCACCACGCAGCCACAGGGGACCACACAGCCCCCTGCACAGC CAGCATCCCAGGGCTCAGGATCAACCGCATAGCCTCCTAGG |
| mm4_exon_Myh8_chr11_67277209 |
TGCAGCATCAGCACTTCTGTTCCTATATAAGCAGGGCTGCCCCTCACACCCTATCTCCGCCAAGAGCCCAGAGGTAAGTG ATGGATGGGAGCCTTGGGAGCCTGAGGACCCTGGGGGCAAGCAGCAAGAACCCAGTG |
| mm4_exon_Jph2_chr2_163397381 |
TATGCCAAGCCCATGTCGTTTGCCCTGGCTCCAATATCCCTCAAAGGTATTCCCACTGGGCCAGGTATAGACGCCTGCCA CTTCAAAGCCAAAATTCCAGGAGCCCGAGTATTCACCCTG |
| mm3_intron_Cdh13_chr8_118962669 |
ACCCTGGCTAGGCTGTAAGAACTGAAGGAGAGTACTGGGGTCTAGGCTGCGAAGGGGAGGAATGAGCATGGAACTGGGGA GCTCAGGGTTAGGAGGAGG |
| mm3_exon_Flnc_chr6_29454412 |
CACCCGGAGACTACAGCATCATCGTGCGCTTTGACGACAAGCACATCCCAGGGAGCCCCTTCACGGCCAAGATCACAGGT GAGGCAGACATTCAGGCACGGGCAGCCTGCCACACCCATGCTCGAGTCAGTT |