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Contents:In the table below, Illumina Nextera Handle sequences have been added and highlighted in bold. Primers for the on-target have been added for convenience. The table below is sorted by the CFD off-target score. Sites with very low CFD scores < 0.02 are unlikely to be cleaved, see our study Haeussler et al. 2016, Figure 2.
In the protocol by Matthew Canver, Harvard, two PCRs are run: one PCR to amplify the potential off-target, then a second PCR to extend the handles with Illumina barcodes. Please click here to download the protocol. Alternatively, you can have a look at Fu et al, 2014.
If a primer was not found, the reason is usually that the region around the off-target is too repetitive. To avoid unspecific primers, all repeats are masked for the primer design (not for off-target search). If you think that we should change the parameters here or should use different primer3 settings, please let us know.
Name | Primer Sequence | Tm | CFD Score |
---|---|---|---|
ontarget_mm0_exon_5730457N03Rik/Evx1_chr6_52313750_F | TCGTCGGCAGCGTCCGCATCACAAGGTGACCCTA | 59.7 | 1.00 |
ontarget_mm0_exon_5730457N03Rik/Evx1_chr6_52313750_R | GTCTCGTGGGCTCGGCTCCTAATCCCAGGCTCCCT | 60.1 | 1.00 |
mm3_intron_0610012H03Rik_chr2_105266180_F | Primer3: not found at this Tm | N.d. | 0.76 |
mm3_intron_0610012H03Rik_chr2_105266180_R | Primer3: not found at this Tm | N.d. | 0.76 |
mm3_intergenic_4930444G20Rik|Gm2539_chr10_22071941_F | Primer3: not found at this Tm | N.d. | 0.75 |
mm3_intergenic_4930444G20Rik|Gm2539_chr10_22071941_R | Primer3: not found at this Tm | N.d. | 0.75 |
mm4_intergenic_Slc26a4|Bcap29_chr12_31584645_F | Primer3: not found at this Tm | N.d. | 0.67 |
mm4_intergenic_Slc26a4|Bcap29_chr12_31584645_R | Primer3: not found at this Tm | N.d. | 0.67 |
mm4_intergenic_Tspan9|Gm10010_chr6_128168301_F | TCGTCGGCAGCGTCACACCATGTCTCAGCACAGG | 59.9 | 0.57 |
mm4_intergenic_Tspan9|Gm10010_chr6_128168301_R | GTCTCGTGGGCTCGGGGGAGTTGGGGACATGACTG | 60.0 | 0.57 |
mm4_intergenic_Gm4691|Tead4_chr6_128223755_F | TCGTCGGCAGCGTCTACACACCACGTCTCAGCAC | 59.9 | 0.57 |
mm4_intergenic_Gm4691|Tead4_chr6_128223755_R | GTCTCGTGGGCTCGGGGGAGTTGGGGACATGACTG | 60.0 | 0.57 |
mm4_intron_4930433N12Rik_chr9_3178199_F | TCGTCGGCAGCGTCTTGGGTTGAGAGTTGGGGAC | 59.5 | 0.56 |
mm4_intron_4930433N12Rik_chr9_3178199_R | GTCTCGTGGGCTCGGACAGCAAATCACACCCCTGT | 59.8 | 0.56 |
mm4_intergenic_Mapk4/Gm9925|Ska1_chr18_74093610_F | TCGTCGGCAGCGTCTGGGGCTCAGAGAGATCACA | 59.9 | 0.52 |
mm4_intergenic_Mapk4/Gm9925|Ska1_chr18_74093610_R | GTCTCGTGGGCTCGGGCTTCGCACACCTGTCTAGT | 60.0 | 0.52 |
mm3_intergenic_Tle3|Rplp1_chr9_61495097_F | Primer3: not found at this Tm | N.d. | 0.48 |
mm3_intergenic_Tle3|Rplp1_chr9_61495097_R | Primer3: not found at this Tm | N.d. | 0.48 |
mm4_intron_Syce2_chr8_84881297_F | Primer3: not found at this Tm | N.d. | 0.48 |
mm4_intron_Syce2_chr8_84881297_R | Primer3: not found at this Tm | N.d. | 0.48 |
mm4_intron_Spg7_chr8_123078261_F | Primer3: not found at this Tm | N.d. | 0.46 |
mm4_intron_Spg7_chr8_123078261_R | Primer3: not found at this Tm | N.d. | 0.46 |
mm4_intergenic_A630031M04Rik|1700112K13Rik_chr4_127666177_F | TCGTCGGCAGCGTCGATAAGACAGCAGGAGGGGC | 59.8 | 0.44 |
mm4_intergenic_A630031M04Rik|1700112K13Rik_chr4_127666177_R | GTCTCGTGGGCTCGGAGAACCACGGCACTATCAGC | 60.1 | 0.44 |
mm4_intergenic_Gm23315|Rprm_chr2_53984018_F | TCGTCGGCAGCGTCGACACTCCTGTCTGAACACACT | 59.8 | 0.43 |
mm4_intergenic_Gm23315|Rprm_chr2_53984018_R | GTCTCGTGGGCTCGGTCCACATTTTCCACAGGCCA | 59.8 | 0.43 |
mm4_intergenic_Gm8513|Gm23755_chr13_45213446_F | TCGTCGGCAGCGTCTGCAAGCAAGAGCAATCCTT | 58.3 | 0.41 |
mm4_intergenic_Gm8513|Gm23755_chr13_45213446_R | GTCTCGTGGGCTCGGCAGAGGCCAGGAGACAACAG | 60.0 | 0.41 |
mm3_intron_Lars2_chr9_123372431_F | Primer3: not found at this Tm | N.d. | 0.41 |
mm3_intron_Lars2_chr9_123372431_R | Primer3: not found at this Tm | N.d. | 0.41 |
mm4_intergenic_Gm10480|5730507C01Rik_chr12_18466647_F | Primer3: not found at this Tm | N.d. | 0.41 |
mm4_intergenic_Gm10480|5730507C01Rik_chr12_18466647_R | Primer3: not found at this Tm | N.d. | 0.41 |
mm4_intron_RP24-289J12.1_chr15_75643342_F | Primer3: not found at this Tm | N.d. | 0.40 |
mm4_intron_RP24-289J12.1_chr15_75643342_R | Primer3: not found at this Tm | N.d. | 0.40 |
mm4_intergenic_Vmn2r-ps119|Vmn2r-ps120_chr17_19276418_F | Primer3: not found at this Tm | N.d. | 0.38 |
mm4_intergenic_Vmn2r-ps119|Vmn2r-ps120_chr17_19276418_R | Primer3: not found at this Tm | N.d. | 0.38 |
mm3_intergenic_Ppp3ca|Gm26107_chr3_136965216_F | Primer3: not found at this Tm | N.d. | 0.37 |
mm3_intergenic_Ppp3ca|Gm26107_chr3_136965216_R | Primer3: not found at this Tm | N.d. | 0.37 |
mm4_intergenic_MIMT1_1|Mir3099_chr7_6797499_F | TCGTCGGCAGCGTCTCTGCAGGGTAGGGATGGAT | 59.7 | 0.36 |
mm4_intergenic_MIMT1_1|Mir3099_chr7_6797499_R | GTCTCGTGGGCTCGGCACACCTGCAAAGTCAAGGC | 59.9 | 0.36 |
mm4_intron_Vopp1_chr6_57790707_F | Primer3: not found at this Tm | N.d. | 0.35 |
mm4_intron_Vopp1_chr6_57790707_R | Primer3: not found at this Tm | N.d. | 0.35 |
mm4_intron_Cyfip1_chr7_55880760_F | TCGTCGGCAGCGTCCCCAAGTCTTGAAGCTCCGT | 59.9 | 0.35 |
mm4_intron_Cyfip1_chr7_55880760_R | GTCTCGTGGGCTCGGGGACCGGGGTCAAACAGTTA | 59.6 | 0.35 |
mm4_intron_Mecom_chr3_30190425_F | Primer3: not found at this Tm | N.d. | 0.34 |
mm4_intron_Mecom_chr3_30190425_R | Primer3: not found at this Tm | N.d. | 0.34 |
mm4_intergenic_Iqch|Gm16759_chr9_63526377_F | Primer3: not found at this Tm | N.d. | 0.34 |
mm4_intergenic_Iqch|Gm16759_chr9_63526377_R | Primer3: not found at this Tm | N.d. | 0.34 |
mm4_exon_Pgd_chr4_149150553_F | TCGTCGGCAGCGTCGGAGCATGTGGTGGTTCAGA | 59.9 | 0.32 |
mm4_exon_Pgd_chr4_149150553_R | GTCTCGTGGGCTCGGTCCCTCCCAGCAATAGGACA | 59.9 | 0.32 |
mm4_intergenic_mmu-mir-8096|Gm25472_chr1_85752706_F | Primer3: not found at this Tm | N.d. | 0.30 |
mm4_intergenic_mmu-mir-8096|Gm25472_chr1_85752706_R | Primer3: not found at this Tm | N.d. | 0.30 |
mm4_intron_Arid2_chr15_96377526_F | Primer3: not found at this Tm | N.d. | 0.30 |
mm4_intron_Arid2_chr15_96377526_R | Primer3: not found at this Tm | N.d. | 0.30 |
mm4_intergenic_Otc|4933416E14Rik_chrX_10347091_F | Primer3: not found at this Tm | N.d. | 0.30 |
mm4_intergenic_Otc|4933416E14Rik_chrX_10347091_R | Primer3: not found at this Tm | N.d. | 0.30 |
mm4_intron_Eya1_chr1_14293677_F | Primer3: not found at this Tm | N.d. | 0.30 |
mm4_intron_Eya1_chr1_14293677_R | Primer3: not found at this Tm | N.d. | 0.30 |
mm3_intergenic_n-R5s82|Pknox2_chr9_37034020_F | TCGTCGGCAGCGTCTGGCATGATGGGACAACACT | 59.5 | 0.29 |
mm3_intergenic_n-R5s82|Pknox2_chr9_37034020_R | GTCTCGTGGGCTCGGGGGAGTGCTTTGCCTTGAGT | 60.5 | 0.29 |
mm4_intron_Bpi_chr2_158273089_F | TCGTCGGCAGCGTCTGTGCACTGGTGTCCATAGTC | 59.9 | 0.29 |
mm4_intron_Bpi_chr2_158273089_R | GTCTCGTGGGCTCGGTGTTCAGCTGGAATCTGCCA | 59.5 | 0.29 |
mm4_intron_Il1rap_chr16_26683654_F | TCGTCGGCAGCGTCAGAAAAGAAAGAAGAGGGGAGAGT | 59.0 | 0.28 |
mm4_intron_Il1rap_chr16_26683654_R | GTCTCGTGGGCTCGGTCTGGTGTTCTATTGCTCTGTT | 57.3 | 0.28 |
mm2_exon_Col20a1_chr2_180996450_F | TCGTCGGCAGCGTCCAGCCACTGGACATCACTGT | 59.9 | 0.28 |
mm2_exon_Col20a1_chr2_180996450_R | GTCTCGTGGGCTCGGTGCTGTGTTCTTACCTGGGC | 60.2 | 0.28 |
mm4_intergenic_Irx4|Gm10263_chr13_73273151_F | Primer3: not found at this Tm | N.d. | 0.28 |
mm4_intergenic_Irx4|Gm10263_chr13_73273151_R | Primer3: not found at this Tm | N.d. | 0.28 |
mm4_intron_Gng2_chr14_19951276_F | TCGTCGGCAGCGTCAGAGATCAAACAGCATCCCACA | 59.6 | 0.27 |
mm4_intron_Gng2_chr14_19951276_R | GTCTCGTGGGCTCGGTTACTCTGGAGCGAGGAGGT | 59.6 | 0.27 |
mm4_intron_Syn3_chr10_86255017_F | Primer3: not found at this Tm | N.d. | 0.25 |
mm4_intron_Syn3_chr10_86255017_R | Primer3: not found at this Tm | N.d. | 0.25 |
mm4_intergenic_Prrg2/Nosip|Nosip_chr7_45068936_F | Primer3: not found at this Tm | N.d. | 0.24 |
mm4_intergenic_Prrg2/Nosip|Nosip_chr7_45068936_R | Primer3: not found at this Tm | N.d. | 0.24 |
mm4_intergenic_Nhsl2|Gm25828_chrX_101884431_F | TCGTCGGCAGCGTCTGGAAGGCCAAGGTGAGTTC | 59.8 | 0.24 |
mm4_intergenic_Nhsl2|Gm25828_chrX_101884431_R | GTCTCGTGGGCTCGGCCTGGCAGTCATCTAGCAGG | 59.8 | 0.24 |
mm4_intergenic_Mageb17-ps|Gm14781_chrX_91626440_F | TCGTCGGCAGCGTCTGTCAGGACTCATCGCAGA | 58.0 | 0.24 |
mm4_intergenic_Mageb17-ps|Gm14781_chrX_91626440_R | GTCTCGTGGGCTCGGTTGCAAAATAACAAAGGAAATGCA | 57.0 | 0.24 |
mm4_intergenic_Zfp42|Gm22986_chr8_43371620_F | TCGTCGGCAGCGTCGCACACTACAACTGCATTCCA | 59.1 | 0.24 |
mm4_intergenic_Zfp42|Gm22986_chr8_43371620_R | GTCTCGTGGGCTCGGTGGAATTCATCAGGAAACACAGA | 58.0 | 0.24 |
mm4_intergenic_Gm13667|4930441J16Rik_chr2_74284619_F | Primer3: not found at this Tm | N.d. | 0.24 |
mm4_intergenic_Gm13667|4930441J16Rik_chr2_74284619_R | Primer3: not found at this Tm | N.d. | 0.24 |
mm4_intergenic_Arid1b|Tmem242_chr17_5407606_F | Primer3: not found at this Tm | N.d. | 0.24 |
mm4_intergenic_Arid1b|Tmem242_chr17_5407606_R | Primer3: not found at this Tm | N.d. | 0.24 |
mm4_intron_Acap2_chr16_31193269_F | Primer3: not found at this Tm | N.d. | 0.23 |
mm4_intron_Acap2_chr16_31193269_R | Primer3: not found at this Tm | N.d. | 0.23 |
mm4_intergenic_Fau-ps1|Macrod2_chr2_141990996_F | TCGTCGGCAGCGTCATGCTCACTCACTGCATCCC | 60.1 | 0.23 |
mm4_intergenic_Fau-ps1|Macrod2_chr2_141990996_R | GTCTCGTGGGCTCGGCACCCCAAGAGGCACACTAT | 59.3 | 0.23 |
mm3_exon_Gm7869_chr8_21709649_F | Primer3: not found at this Tm | N.d. | 0.22 |
mm3_exon_Gm7869_chr8_21709649_R | Primer3: not found at this Tm | N.d. | 0.22 |
mm3_exon_Gm2869_chr8_21102277_F | Primer3: not found at this Tm | N.d. | 0.22 |
mm3_exon_Gm2869_chr8_21102277_R | Primer3: not found at this Tm | N.d. | 0.22 |
mm3_exon_Gm15314_chr8_21600530_F | Primer3: not found at this Tm | N.d. | 0.22 |
mm3_exon_Gm15314_chr8_21600530_R | Primer3: not found at this Tm | N.d. | 0.22 |
mm3_exon_Gm15304_chr8_21462583_F | Primer3: not found at this Tm | N.d. | 0.22 |
mm3_exon_Gm15304_chr8_21462583_R | Primer3: not found at this Tm | N.d. | 0.22 |
mm3_exon_Gm15303_chr8_21238299_F | Primer3: not found at this Tm | N.d. | 0.22 |
mm3_exon_Gm15303_chr8_21238299_R | Primer3: not found at this Tm | N.d. | 0.22 |
mm3_exon_Gm15302_chr8_21332574_F | Primer3: not found at this Tm | N.d. | 0.22 |
mm3_exon_Gm15302_chr8_21332574_R | Primer3: not found at this Tm | N.d. | 0.22 |
mm4_intergenic_Gm2373|5330416C01Rik_chr13_97669064_F | TCGTCGGCAGCGTCGCAGAGAGGAGCCAGGATTC | 59.8 | 0.21 |
mm4_intergenic_Gm2373|5330416C01Rik_chr13_97669064_R | GTCTCGTGGGCTCGGTCGCCCTAATTCAGCAAGCA | 60.0 | 0.21 |
mm4_intergenic_Gm23735|Fndc3a_chr14_72293762_F | TCGTCGGCAGCGTCGGTCACACCTGGGCACATTA | 59.9 | 0.21 |
mm4_intergenic_Gm23735|Fndc3a_chr14_72293762_R | GTCTCGTGGGCTCGGAGCAGATGTCGACATTGCCA | 60.0 | 0.21 |
mm4_intron_Sin3a_chr9_57077134_F | TCGTCGGCAGCGTCTGTGATGCCACGCCCCTC | 62.4 | 0.21 |
mm4_intron_Sin3a_chr9_57077134_R | GTCTCGTGGGCTCGGGAGGAGCAGACACGGAGC | 59.8 | 0.21 |
mm4_intergenic_Rab8b|Rps27l_chr9_66933899_F | TCGTCGGCAGCGTCTCAGGCAGTTCAAGGTCCAC | 59.8 | 0.21 |
mm4_intergenic_Rab8b|Rps27l_chr9_66933899_R | GTCTCGTGGGCTCGGTCCTGATTTGCCGAGAAGAGG | 59.7 | 0.21 |
mm4_intergenic_Fgf10|Nnt_chr13_119038156_F | Primer3: not found at this Tm | N.d. | 0.20 |
mm4_intergenic_Fgf10|Nnt_chr13_119038156_R | Primer3: not found at this Tm | N.d. | 0.20 |
mm4_intergenic_Gm23892|Gm25382_chr10_17058783_F | Primer3: not found at this Tm | N.d. | 0.20 |
mm4_intergenic_Gm23892|Gm25382_chr10_17058783_R | Primer3: not found at this Tm | N.d. | 0.20 |
mm4_intergenic_4930428D18Rik|Gm5793_chrX_76426096_F | Primer3: not found at this Tm | N.d. | 0.20 |
mm4_intergenic_4930428D18Rik|Gm5793_chrX_76426096_R | Primer3: not found at this Tm | N.d. | 0.20 |
mm4_intron_Pmel_chr10_128710924_F | Primer3: not found at this Tm | N.d. | 0.20 |
mm4_intron_Pmel_chr10_128710924_R | Primer3: not found at this Tm | N.d. | 0.20 |
mm4_intergenic_Gm3968|Gm3977_chr7_15132785_F | Primer3: not found at this Tm | N.d. | 0.19 |
mm4_intergenic_Gm3968|Gm3977_chr7_15132785_R | Primer3: not found at this Tm | N.d. | 0.19 |
mm3_intergenic_Gm20665|Gm20664_chr7_14771346_F | Primer3: not found at this Tm | N.d. | 0.19 |
mm3_intergenic_Gm20665|Gm20664_chr7_14771346_R | Primer3: not found at this Tm | N.d. | 0.19 |
mm4_intergenic_Gm13317|Plxdc2_chr2_16314038_F | Primer3: not found at this Tm | N.d. | 0.19 |
mm4_intergenic_Gm13317|Plxdc2_chr2_16314038_R | Primer3: not found at this Tm | N.d. | 0.19 |
mm4_intergenic_Synpo|Ndst1_chr18_60669981_F | Primer3: not found at this Tm | N.d. | 0.19 |
mm4_intergenic_Synpo|Ndst1_chr18_60669981_R | Primer3: not found at this Tm | N.d. | 0.19 |
mm3_intron_Ppap2b_chr4_105194275_F | Primer3: not found at this Tm | N.d. | 0.19 |
mm3_intron_Ppap2b_chr4_105194275_R | Primer3: not found at this Tm | N.d. | 0.19 |
mm4_intergenic_Gm26119|Fzd8_chr18_9180991_F | Primer3: not found at this Tm | N.d. | 0.18 |
mm4_intergenic_Gm26119|Fzd8_chr18_9180991_R | Primer3: not found at this Tm | N.d. | 0.18 |
mm4_intergenic_B930078G14Rik|Fam155a_chr8_8988822_F | Primer3: not found at this Tm | N.d. | 0.17 |
mm4_intergenic_B930078G14Rik|Fam155a_chr8_8988822_R | Primer3: not found at this Tm | N.d. | 0.17 |
mm4_intergenic_Tmem126b|Dlg2_chr7_90786429_F | TCGTCGGCAGCGTCTCCACTTGGAAGACAGTTCTGG | 59.8 | 0.17 |
mm4_intergenic_Tmem126b|Dlg2_chr7_90786429_R | GTCTCGTGGGCTCGGGTGAATTCTCACCTGCTTCTCA | 58.3 | 0.17 |
mm4_intron_Spock1_chr13_57879847_F | Primer3: not found at this Tm | N.d. | 0.17 |
mm4_intron_Spock1_chr13_57879847_R | Primer3: not found at this Tm | N.d. | 0.17 |
mm4_intron_Stx17_chr4_48130475_F | TCGTCGGCAGCGTCTTGGAGTTCTGTTGCTGGTT | 57.5 | 0.16 |
mm4_intron_Stx17_chr4_48130475_R | GTCTCGTGGGCTCGGGAACTCCTCTCACGGAAGGC | 60.1 | 0.16 |
mm4_exon_Sult2b1_chr7_45758889_F | Primer3: not found at this Tm | N.d. | 0.16 |
mm4_exon_Sult2b1_chr7_45758889_R | Primer3: not found at this Tm | N.d. | 0.16 |
mm4_intergenic_Tmem29|3110067C02Rik_chrX_150459269_F | Primer3: not found at this Tm | N.d. | 0.16 |
mm4_intergenic_Tmem29|3110067C02Rik_chrX_150459269_R | Primer3: not found at this Tm | N.d. | 0.16 |
mm4_intron_Gm15046_chrX_140184943_F | Primer3: not found at this Tm | N.d. | 0.16 |
mm4_intron_Gm15046_chrX_140184943_R | Primer3: not found at this Tm | N.d. | 0.16 |
mm4_intergenic_Gm13726|4930440I19Rik_chr2_77991656_F | TCGTCGGCAGCGTCAAATATGAAGTGAAAGGAAGGCC | 57.0 | 0.16 |
mm4_intergenic_Gm13726|4930440I19Rik_chr2_77991656_R | GTCTCGTGGGCTCGGTGCAGTGTTACCTTTCTGGGG | 60.2 | 0.16 |
mm4_intergenic_Gm2568|Foxa1_chr12_57523960_F | Primer3: not found at this Tm | N.d. | 0.16 |
mm4_intergenic_Gm2568|Foxa1_chr12_57523960_R | Primer3: not found at this Tm | N.d. | 0.16 |
mm3_intron_Rab3c_chr13_110213365_F | Primer3: not found at this Tm | N.d. | 0.16 |
mm3_intron_Rab3c_chr13_110213365_R | Primer3: not found at this Tm | N.d. | 0.16 |
mm4_intergenic_Ola1|Sp9_chr2_73265496_F | Primer3: not found at this Tm | N.d. | 0.16 |
mm4_intergenic_Ola1|Sp9_chr2_73265496_R | Primer3: not found at this Tm | N.d. | 0.16 |
mm4_intergenic_Gm23538|1700110M21Rik_chr14_101030414_F | Primer3: not found at this Tm | N.d. | 0.16 |
mm4_intergenic_Gm23538|1700110M21Rik_chr14_101030414_R | Primer3: not found at this Tm | N.d. | 0.16 |
mm4_intergenic_Gm22913|Gm20091_chr10_96274608_F | TCGTCGGCAGCGTCGGGTTGCTTCTTAGATACCACCA | 60.0 | 0.15 |
mm4_intergenic_Gm22913|Gm20091_chr10_96274608_R | GTCTCGTGGGCTCGGTCAGACTCTCCCTGGCAAAC | 59.3 | 0.15 |
mm4_intergenic_Zdhhc17|Gm5428_chr10_111074014_F | TCGTCGGCAGCGTCCACCTGGCATTCCCATCTGA | 59.7 | 0.15 |
mm4_intergenic_Zdhhc17|Gm5428_chr10_111074014_R | GTCTCGTGGGCTCGGGCTCCTGCCAGACACAAAGA | 60.2 | 0.15 |
mm4_intergenic_Gm26235|Gm25392_chr18_19547593_F | TCGTCGGCAGCGTCTCCTTGGAAAACTCTAAAGCAGA | 57.6 | 0.15 |
mm4_intergenic_Gm26235|Gm25392_chr18_19547593_R | GTCTCGTGGGCTCGGAGGGCTGATTTTAAAAGCTTGTT | 57.4 | 0.15 |
mm3_intergenic_Gm7816|Gm2810_chr5_39865710_F | Primer3: not found at this Tm | N.d. | 0.15 |
mm3_intergenic_Gm7816|Gm2810_chr5_39865710_R | Primer3: not found at this Tm | N.d. | 0.15 |
mm4_intergenic_Cyp2c55/Gm23800|Cyp2c55_chr19_39010212_F | Primer3: not found at this Tm | N.d. | 0.15 |
mm4_intergenic_Cyp2c55/Gm23800|Cyp2c55_chr19_39010212_R | Primer3: not found at this Tm | N.d. | 0.15 |
mm4_intergenic_Tnrc18|Gm15770_chr5_142848508_F | Primer3: not found at this Tm | N.d. | 0.15 |
mm4_intergenic_Tnrc18|Gm15770_chr5_142848508_R | Primer3: not found at this Tm | N.d. | 0.15 |
mm3_intergenic_AC107236.1|Gm8623_chr8_47613097_F | TCGTCGGCAGCGTCTACACGCATACCTGGCAGAG | 59.5 | 0.14 |
mm3_intergenic_AC107236.1|Gm8623_chr8_47613097_R | GTCTCGTGGGCTCGGTGTCCCACACTCAGCACATC | 59.9 | 0.14 |
mm4_intron_Apol7e_chr15_77707450_F | Primer3: not found at this Tm | N.d. | 0.14 |
mm4_intron_Apol7e_chr15_77707450_R | Primer3: not found at this Tm | N.d. | 0.14 |
mm3_intergenic_Gm26341|Amd2_chr10_35630882_F | Primer3: not found at this Tm | N.d. | 0.14 |
mm3_intergenic_Gm26341|Amd2_chr10_35630882_R | Primer3: not found at this Tm | N.d. | 0.14 |
mm4_intergenic_Gm24817|Apcs_chr1_172860126_F | TCGTCGGCAGCGTCAGGGAAAAGCTACCAAGGCA | 59.2 | 0.14 |
mm4_intergenic_Gm24817|Apcs_chr1_172860126_R | GTCTCGTGGGCTCGGGGCTAGACCCTCATCAGCTG | 59.6 | 0.14 |
mm3_intergenic_1110051M20Rik|Gm13787_chr2_91325255_F | TCGTCGGCAGCGTCCAGAGACAGGCCAGATGGAC | 59.8 | 0.14 |
mm3_intergenic_1110051M20Rik|Gm13787_chr2_91325255_R | GTCTCGTGGGCTCGGGGCATGTTCTGAGCCCTCTT | 60.0 | 0.14 |
mm4_intron_Mamdc2_chr19_23375692_F | Primer3: not found at this Tm | N.d. | 0.14 |
mm4_intron_Mamdc2_chr19_23375692_R | Primer3: not found at this Tm | N.d. | 0.14 |
mm4_intron_Rragd_chr4_32991805_F | Primer3: not found at this Tm | N.d. | 0.14 |
mm4_intron_Rragd_chr4_32991805_R | Primer3: not found at this Tm | N.d. | 0.14 |
mm4_intergenic_Pdilt|Gm26967_chr7_119501888_F | Primer3: not found at this Tm | N.d. | 0.14 |
mm4_intergenic_Pdilt|Gm26967_chr7_119501888_R | Primer3: not found at this Tm | N.d. | 0.14 |
mm4_intergenic_Fam154a|Gm26017_chr4_86507059_F | TCGTCGGCAGCGTCATGGCTTTCTCCACACACCC | 60.2 | 0.14 |
mm4_intergenic_Fam154a|Gm26017_chr4_86507059_R | GTCTCGTGGGCTCGGGGCTGGTCAGAGAAAAGGCA | 60.2 | 0.14 |
mm3_intron_Celsr1_chr15_86005571_F | TCGTCGGCAGCGTCAACCTCCCTACTGCCTTTAAAA | 57.2 | 0.13 |
mm3_intron_Celsr1_chr15_86005571_R | GTCTCGTGGGCTCGGCAGCTTGACCATAATCATGCCA | 59.0 | 0.13 |
mm4_intergenic_Gm14936|Gm14939_chrX_113020900_F | Primer3: not found at this Tm | N.d. | 0.13 |
mm4_intergenic_Gm14936|Gm14939_chrX_113020900_R | Primer3: not found at this Tm | N.d. | 0.13 |
mm4_intron_Sema6d_chr2_124550481_F | Primer3: not found at this Tm | N.d. | 0.13 |
mm4_intron_Sema6d_chr2_124550481_R | Primer3: not found at this Tm | N.d. | 0.13 |
mm4_intron_Myo18b_chr5_112729087_F | Primer3: not found at this Tm | N.d. | 0.13 |
mm4_intron_Myo18b_chr5_112729087_R | Primer3: not found at this Tm | N.d. | 0.13 |
mm4_intron_Ctnnd2_chr15_30362102_F | Primer3: not found at this Tm | N.d. | 0.13 |
mm4_intron_Ctnnd2_chr15_30362102_R | Primer3: not found at this Tm | N.d. | 0.13 |
mm2_intergenic_Gm13912|Gm13916_chr2_108363859_F | Primer3: not found at this Tm | N.d. | 0.12 |
mm2_intergenic_Gm13912|Gm13916_chr2_108363859_R | Primer3: not found at this Tm | N.d. | 0.12 |
mm4_intergenic_Gm10479|1700030C10Rik_chr12_20467196_F | Primer3: not found at this Tm | N.d. | 0.12 |
mm4_intergenic_Gm10479|1700030C10Rik_chr12_20467196_R | Primer3: not found at this Tm | N.d. | 0.12 |
mm4_intergenic_5730507C01Rik|Gm3944_chr12_18570038_F | TCGTCGGCAGCGTCAACTTCCATGGGAGCAGGTG | 59.9 | 0.12 |
mm4_intergenic_5730507C01Rik|Gm3944_chr12_18570038_R | GTCTCGTGGGCTCGGTTGTGTGACTTGTGGGCTCA | 59.7 | 0.12 |
mm4_intergenic_Gm4897|RP24-84K14.11_chr7_15268555_F | Primer3: not found at this Tm | N.d. | 0.12 |
mm4_intergenic_Gm4897|RP24-84K14.11_chr7_15268555_R | Primer3: not found at this Tm | N.d. | 0.12 |
mm4_intergenic_Gm4014|Obox3_chr7_15458935_F | Primer3: not found at this Tm | N.d. | 0.12 |
mm4_intergenic_Gm4014|Obox3_chr7_15458935_R | Primer3: not found at this Tm | N.d. | 0.12 |
mm4_intergenic_Gm4003|Gm4897_chr7_15257224_F | Primer3: not found at this Tm | N.d. | 0.12 |
mm4_intergenic_Gm4003|Gm4897_chr7_15257224_R | Primer3: not found at this Tm | N.d. | 0.12 |
mm4_intergenic_Gm4001|Gm4003_chr7_15245898_F | Primer3: not found at this Tm | N.d. | 0.12 |
mm4_intergenic_Gm4001|Gm4003_chr7_15245898_R | Primer3: not found at this Tm | N.d. | 0.12 |
mm4_intergenic_Gm3998|Gm4001_chr7_15234557_F | Primer3: not found at this Tm | N.d. | 0.12 |
mm4_intergenic_Gm3998|Gm4001_chr7_15234557_R | Primer3: not found at this Tm | N.d. | 0.12 |
mm4_intergenic_Gm3996|Gm3998_chr7_15223253_F | Primer3: not found at this Tm | N.d. | 0.12 |
mm4_intergenic_Gm3996|Gm3998_chr7_15223253_R | Primer3: not found at this Tm | N.d. | 0.12 |
mm4_intergenic_Gm3994|Gm3996_chr7_15211923_F | Primer3: not found at this Tm | N.d. | 0.12 |
mm4_intergenic_Gm3994|Gm3996_chr7_15211923_R | Primer3: not found at this Tm | N.d. | 0.12 |
mm4_intergenic_Gm3989|Gm3994_chr7_15200584_F | Primer3: not found at this Tm | N.d. | 0.12 |
mm4_intergenic_Gm3989|Gm3994_chr7_15200584_R | Primer3: not found at this Tm | N.d. | 0.12 |
mm4_intergenic_Gm3987|Gm3989_chr7_15189279_F | Primer3: not found at this Tm | N.d. | 0.12 |
mm4_intergenic_Gm3987|Gm3989_chr7_15189279_R | Primer3: not found at this Tm | N.d. | 0.12 |
mm4_intergenic_Gm3984|Gm3987_chr7_15177938_F | Primer3: not found at this Tm | N.d. | 0.12 |
mm4_intergenic_Gm3984|Gm3987_chr7_15177938_R | Primer3: not found at this Tm | N.d. | 0.12 |
mm4_intergenic_Gm3981|Gm3984_chr7_15166857_F | Primer3: not found at this Tm | N.d. | 0.12 |
mm4_intergenic_Gm3981|Gm3984_chr7_15166857_R | Primer3: not found at this Tm | N.d. | 0.12 |
mm4_intergenic_Gm3980|Gm3981_chr7_15155527_F | Primer3: not found at this Tm | N.d. | 0.12 |
mm4_intergenic_Gm3980|Gm3981_chr7_15155527_R | Primer3: not found at this Tm | N.d. | 0.12 |
mm4_intergenic_Gm3977|Gm3980_chr7_15144159_F | Primer3: not found at this Tm | N.d. | 0.12 |
mm4_intergenic_Gm3977|Gm3980_chr7_15144159_R | Primer3: not found at this Tm | N.d. | 0.12 |
mm4_intergenic_Gm10678|Gm4014_chr7_15447611_F | Primer3: not found at this Tm | N.d. | 0.12 |
mm4_intergenic_Gm10678|Gm4014_chr7_15447611_R | Primer3: not found at this Tm | N.d. | 0.12 |
mm3_intergenic_Kif6|Gm16555_chr17_49809136_F | Primer3: not found at this Tm | N.d. | 0.12 |
mm3_intergenic_Kif6|Gm16555_chr17_49809136_R | Primer3: not found at this Tm | N.d. | 0.12 |
mm4_intron_Gm26861_chr13_10614433_F | TCGTCGGCAGCGTCAGGAGGGAATGGTAGACGGA | 59.3 | 0.12 |
mm4_intron_Gm26861_chr13_10614433_R | GTCTCGTGGGCTCGGCACTGAGCTTAGGGAACAGCA | 59.9 | 0.12 |
mm4_intron_Nckap5_chr1_126750242_F | Primer3: not found at this Tm | N.d. | 0.12 |
mm4_intron_Nckap5_chr1_126750242_R | Primer3: not found at this Tm | N.d. | 0.12 |
mm4_intron_2700097O09Rik_chr12_55052262_F | Primer3: not found at this Tm | N.d. | 0.12 |
mm4_intron_2700097O09Rik_chr12_55052262_R | Primer3: not found at this Tm | N.d. | 0.12 |
mm4_intergenic_Gm22977|Zpld1_chr16_55001620_F | Primer3: not found at this Tm | N.d. | 0.12 |
mm4_intergenic_Gm22977|Zpld1_chr16_55001620_R | Primer3: not found at this Tm | N.d. | 0.12 |
mm4_intergenic_AC154801.1|BC040587_chr16_40708803_F | TCGTCGGCAGCGTCCCCTGACGTTTGGTGTCTCA | 59.8 | 0.12 |
mm4_intergenic_AC154801.1|BC040587_chr16_40708803_R | GTCTCGTGGGCTCGGGTCTCCATGAGCATTAAGAAAGGC | 59.9 | 0.12 |
mm4_intergenic_Neto1|Cbln2_chr18_86534347_F | Primer3: not found at this Tm | N.d. | 0.12 |
mm4_intergenic_Neto1|Cbln2_chr18_86534347_R | Primer3: not found at this Tm | N.d. | 0.12 |
mm3_intron_Elavl4_chr4_110309979_F | Primer3: not found at this Tm | N.d. | 0.12 |
mm3_intron_Elavl4_chr4_110309979_R | Primer3: not found at this Tm | N.d. | 0.12 |
mm4_intron_Gm20474_chr12_23554773_F | Primer3: not found at this Tm | N.d. | 0.12 |
mm4_intron_Gm20474_chr12_23554773_R | Primer3: not found at this Tm | N.d. | 0.12 |
mm4_intron_Gm10476_chr12_22395750_F | Primer3: not found at this Tm | N.d. | 0.12 |
mm4_intron_Gm10476_chr12_22395750_R | Primer3: not found at this Tm | N.d. | 0.12 |
mm4_intergenic_Hpcal1|B430203G13Rik_chr12_17854631_F | Primer3: not found at this Tm | N.d. | 0.12 |
mm4_intergenic_Hpcal1|B430203G13Rik_chr12_17854631_R | Primer3: not found at this Tm | N.d. | 0.12 |
mm4_intergenic_Gm9312|Gm16372_chr12_24297911_F | Primer3: not found at this Tm | N.d. | 0.12 |
mm4_intergenic_Gm9312|Gm16372_chr12_24297911_R | Primer3: not found at this Tm | N.d. | 0.12 |
mm4_intergenic_Gm9257|Gm22189_chr12_19807293_F | Primer3: not found at this Tm | N.d. | 0.12 |
mm4_intergenic_Gm9257|Gm22189_chr12_19807293_R | Primer3: not found at this Tm | N.d. | 0.12 |
mm4_intergenic_Gm5633|Gm22908_chr12_21823583_F | TCGTCGGCAGCGTCTAGCTCACATCACACCGGTC | 59.4 | 0.12 |
mm4_intergenic_Gm5633|Gm22908_chr12_21823583_R | GTCTCGTGGGCTCGGAAGAGGCCTGGAGCAACTTC | 59.9 | 0.12 |
mm4_intergenic_Gm3993|Gm10479_chr12_20380336_F | TCGTCGGCAGCGTCAAGAGGCCTGGAGCAACTTC | 59.9 | 0.12 |
mm4_intergenic_Gm3993|Gm10479_chr12_20380336_R | GTCTCGTGGGCTCGGTAGCTCACATCACACCGGTC | 59.4 | 0.12 |
mm4_intergenic_Gm3944|Gm5784_chr12_18925080_F | Primer3: not found at this Tm | N.d. | 0.12 |
mm4_intergenic_Gm3944|Gm5784_chr12_18925080_R | Primer3: not found at this Tm | N.d. | 0.12 |
mm4_intergenic_Gm21863|Gm3993_chr12_20013318_F | TCGTCGGCAGCGTCAACTTCCAAGGGAGCAGGTG | 59.8 | 0.12 |
mm4_intergenic_Gm21863|Gm3993_chr12_20013318_R | GTCTCGTGGGCTCGGTGTTGTGTGACTTGTGGGCT | 60.0 | 0.12 |
mm4_intergenic_Gm20474|Gm10330_chr12_23706154_F | TCGTCGGCAGCGTCTTGTGTGACTTGTGGGCTCA | 59.7 | 0.12 |
mm4_intergenic_Gm20474|Gm10330_chr12_23706154_R | GTCTCGTGGGCTCGGGGAGCAGGTGGACATGTGAT | 59.7 | 0.12 |
mm4_intergenic_Gm17391|2410018L13Rik_chr12_22949817_F | Primer3: not found at this Tm | N.d. | 0.12 |
mm4_intergenic_Gm17391|2410018L13Rik_chr12_22949817_R | Primer3: not found at this Tm | N.d. | 0.12 |
mm4_intergenic_Gm10476|Gm17391_chr12_22531111_F | TCGTCGGCAGCGTCTTGTGTGACTTGTGGGCTCA | 59.7 | 0.12 |
mm4_intergenic_Gm10476|Gm17391_chr12_22531111_R | GTCTCGTGGGCTCGGGTGGCCATGTGATAGGGGAG | 59.8 | 0.12 |
mm4_intergenic_Gm10330|Gm17330_chr12_23874828_F | TCGTCGGCAGCGTCTTGTGTGACTTGTGGGCTCA | 59.7 | 0.12 |
mm4_intergenic_Gm10330|Gm17330_chr12_23874828_R | GTCTCGTGGGCTCGGGGAGCAGGTGGACATGTGAT | 59.7 | 0.12 |
mm4_intergenic_2410018L13Rik|Gm26140_chr12_23085391_F | TCGTCGGCAGCGTCAGGTCACACGTGTCCTAGTT | 58.2 | 0.12 |
mm4_intergenic_2410018L13Rik|Gm26140_chr12_23085391_R | GTCTCGTGGGCTCGGGTGGCCATGTGATAGGGGAG | 59.8 | 0.12 |
mm4_intron_Dlgap2_chr8_14775581_F | Primer3: not found at this Tm | N.d. | 0.11 |
mm4_intron_Dlgap2_chr8_14775581_R | Primer3: not found at this Tm | N.d. | 0.11 |
mm4_intron_Aldh1l1_chr6_90582058_F | Primer3: not found at this Tm | N.d. | 0.11 |
mm4_intron_Aldh1l1_chr6_90582058_R | Primer3: not found at this Tm | N.d. | 0.11 |
mm4_intergenic_Gja5|Gm24435_chr3_97111439_F | TCGTCGGCAGCGTCCCACCCAGACTGCATTCTGT | 59.9 | 0.11 |
mm4_intergenic_Gja5|Gm24435_chr3_97111439_R | GTCTCGTGGGCTCGGAGGCACACAGCTGTTGTTCA | 60.3 | 0.11 |
mm4_intergenic_Gm24670|Etl4_chr2_19693314_F | Primer3: not found at this Tm | N.d. | 0.11 |
mm4_intergenic_Gm24670|Etl4_chr2_19693314_R | Primer3: not found at this Tm | N.d. | 0.11 |
mm4_intergenic_Gm12596|Susd1_chr4_59267493_F | Primer3: not found at this Tm | N.d. | 0.11 |
mm4_intergenic_Gm12596|Susd1_chr4_59267493_R | Primer3: not found at this Tm | N.d. | 0.11 |
mm4_intergenic_Gm14980|Pcdh19_chrX_133451984_F | Primer3: not found at this Tm | N.d. | 0.11 |
mm4_intergenic_Gm14980|Pcdh19_chrX_133451984_R | Primer3: not found at this Tm | N.d. | 0.11 |
mm4_intergenic_Krt13|Krt15_chr11_100122018_F | TCGTCGGCAGCGTCGGCTGGATGGAATGTTCTGGA | 60.0 | 0.11 |
mm4_intergenic_Krt13|Krt15_chr11_100122018_R | GTCTCGTGGGCTCGGTTCAGGCTCAAGGTGTCCAA | 59.1 | 0.11 |
mm4_intergenic_Tlr2|D930015E06Rik_chr3_83883699_F | TCGTCGGCAGCGTCAATGGGGTTGGAAGTTGGCA | 60.1 | 0.11 |
mm4_intergenic_Tlr2|D930015E06Rik_chr3_83883699_R | GTCTCGTGGGCTCGGGTCCACTCTCCCTCCTGTGA | 60.2 | 0.11 |
mm4_intergenic_Gm5449|Drd1a_chr13_53590279_F | TCGTCGGCAGCGTCACTCCATAGCAAGGTTGGGG | 59.3 | 0.11 |
mm4_intergenic_Gm5449|Drd1a_chr13_53590279_R | GTCTCGTGGGCTCGGCACCCTGCATCCCTTTGCTA | 60.0 | 0.11 |
mm4_intron_Gabrg3_chr7_56767259_F | TCGTCGGCAGCGTCGAGGTAGCCACAAACAGCCT | 59.9 | 0.11 |
mm4_intron_Gabrg3_chr7_56767259_R | GTCTCGTGGGCTCGGTGTTGAAAGTGTAACCTGGGT | 57.3 | 0.11 |
mm4_intron_Tyw1_chr5_130262636_F | Primer3: not found at this Tm | N.d. | 0.11 |
mm4_intron_Tyw1_chr5_130262636_R | Primer3: not found at this Tm | N.d. | 0.11 |
mm4_intron_Gm26531_chr12_85973378_F | Primer3: not found at this Tm | N.d. | 0.11 |
mm4_intron_Gm26531_chr12_85973378_R | Primer3: not found at this Tm | N.d. | 0.11 |
mm4_intergenic_Gm11997|Vwc2_chr11_10386935_F | TCGTCGGCAGCGTCTCAACCAGAATAGAGCCTAAAAGT | 57.6 | 0.10 |
mm4_intergenic_Gm11997|Vwc2_chr11_10386935_R | GTCTCGTGGGCTCGGTCTCAATAGGCATTCAGGTCC | 57.1 | 0.10 |
mm4_intron_Sh3pxd2a_chr19_47332457_F | Primer3: not found at this Tm | N.d. | 0.10 |
mm4_intron_Sh3pxd2a_chr19_47332457_R | Primer3: not found at this Tm | N.d. | 0.10 |
mm4_intergenic_Gm11231|Gm11232_chr4_71755069_F | Primer3: not found at this Tm | N.d. | 0.10 |
mm4_intergenic_Gm11231|Gm11232_chr4_71755069_R | Primer3: not found at this Tm | N.d. | 0.10 |
mm4_intergenic_Rps2-ps6|Tsc22d1_chr14_76240043_F | Primer3: not found at this Tm | N.d. | 0.10 |
mm4_intergenic_Rps2-ps6|Tsc22d1_chr14_76240043_R | Primer3: not found at this Tm | N.d. | 0.10 |
mm4_intergenic_Gm26173|Tbc1d4_chr14_101311959_F | TCGTCGGCAGCGTCGACCCACACACCCACTTCTC | 60.2 | 0.10 |
mm4_intergenic_Gm26173|Tbc1d4_chr14_101311959_R | GTCTCGTGGGCTCGGACAATTGGCTGGAGTGAGGG | 59.9 | 0.10 |
mm4_intergenic_Gm9923|Gm24984_chr10_72506575_F | Primer3: not found at this Tm | N.d. | 0.10 |
mm4_intergenic_Gm9923|Gm24984_chr10_72506575_R | Primer3: not found at this Tm | N.d. | 0.10 |
mm3_intron_Wnt3a_chr11_59287204_F | TCGTCGGCAGCGTCGGGCTGCAGAGAAGAGTGAG | 60.1 | 0.10 |
mm3_intron_Wnt3a_chr11_59287204_R | GTCTCGTGGGCTCGGTGTGCTGTGTGTGTCCCAG | 60.1 | 0.10 |
mm4_intron_Zfp11_chr5_129660060_F | Primer3: not found at this Tm | N.d. | 0.10 |
mm4_intron_Zfp11_chr5_129660060_R | Primer3: not found at this Tm | N.d. | 0.10 |
mm4_intergenic_Gfra4|Adam33_chr2_131044679_F | Primer3: not found at this Tm | N.d. | 0.10 |
mm4_intergenic_Gfra4|Adam33_chr2_131044679_R | Primer3: not found at this Tm | N.d. | 0.10 |
mm4_intergenic_AC158942.1|5031425E22Rik_chr5_23293586_F | Primer3: not found at this Tm | N.d. | 0.10 |
mm4_intergenic_AC158942.1|5031425E22Rik_chr5_23293586_R | Primer3: not found at this Tm | N.d. | 0.10 |
mm3_intron_Gm973_chr1_59575527_F | Primer3: not found at this Tm | N.d. | 0.10 |
mm3_intron_Gm973_chr1_59575527_R | Primer3: not found at this Tm | N.d. | 0.10 |
mm4_intergenic_Golga5|Chga_chr12_102525057_F | TCGTCGGCAGCGTCAGCAGAGCCTATCCTTTGGG | 59.1 | 0.10 |
mm4_intergenic_Golga5|Chga_chr12_102525057_R | GTCTCGTGGGCTCGGTGCCCCAAACCAACTCTCTC | 59.8 | 0.10 |
mm4_intergenic_CT030233.1|Gm20675_chr14_67089200_F | Primer3: not found at this Tm | N.d. | 0.09 |
mm4_intergenic_CT030233.1|Gm20675_chr14_67089200_R | Primer3: not found at this Tm | N.d. | 0.09 |
mm4_intron_Dpp6_chr5_27210193_F | TCGTCGGCAGCGTCACACACTGTGTTCAAAGGATTCA | 58.7 | 0.09 |
mm4_intron_Dpp6_chr5_27210193_R | GTCTCGTGGGCTCGGGTCCACAGTGCCTGGTACTC | 60.0 | 0.09 |
mm4_intergenic_Gm6245|Gcnt2_chr13_40851571_F | Primer3: not found at this Tm | N.d. | 0.09 |
mm4_intergenic_Gm6245|Gcnt2_chr13_40851571_R | Primer3: not found at this Tm | N.d. | 0.09 |
mm4_intron_Usp12_chr5_146777591_F | Primer3: not found at this Tm | N.d. | 0.09 |
mm4_intron_Usp12_chr5_146777591_R | Primer3: not found at this Tm | N.d. | 0.09 |
mm3_intron_Gria1_chr11_57268218_F | TCGTCGGCAGCGTCCTTAGAGCTCCTCGTCCCCT | 60.1 | 0.09 |
mm3_intron_Gria1_chr11_57268218_R | GTCTCGTGGGCTCGGCCAGCACATCCAGAGACACA | 59.6 | 0.09 |
mm4_intergenic_Gm5976|Tmem194b_chr1_52581927_F | TCGTCGGCAGCGTCCTGTGGCTGGTGAGGGTAAG | 60.0 | 0.09 |
mm4_intergenic_Gm5976|Tmem194b_chr1_52581927_R | GTCTCGTGGGCTCGGCAAACCCACTCTCCTCAGCC | 60.3 | 0.09 |
mm3_intron_Gpc6_chr14_116976957_F | Primer3: not found at this Tm | N.d. | 0.09 |
mm3_intron_Gpc6_chr14_116976957_R | Primer3: not found at this Tm | N.d. | 0.09 |
mm4_intron_Cntnap3_chr13_64889787_F | Primer3: not found at this Tm | N.d. | 0.09 |
mm4_intron_Cntnap3_chr13_64889787_R | Primer3: not found at this Tm | N.d. | 0.09 |
mm4_intron_Rimklb_chr6_122472906_F | Primer3: not found at this Tm | N.d. | 0.08 |
mm4_intron_Rimklb_chr6_122472906_R | Primer3: not found at this Tm | N.d. | 0.08 |
mm4_intergenic_Slc38a5|Ssxb10_chrX_8294294_F | Primer3: not found at this Tm | N.d. | 0.08 |
mm4_intergenic_Slc38a5|Ssxb10_chrX_8294294_R | Primer3: not found at this Tm | N.d. | 0.08 |
mm4_intron_Gbf1_chr19_46260397_F | TCGTCGGCAGCGTCTGCTGACCAGAAAACCTACAGT | 59.5 | 0.08 |
mm4_intron_Gbf1_chr19_46260397_R | GTCTCGTGGGCTCGGCATCCTGCAAAAGTCGCCAC | 60.1 | 0.08 |
mm4_intergenic_Gm14243|Gm5270_chr2_161244091_F | TCGTCGGCAGCGTCGGCTAACCTGAGGCTGACAG | 60.1 | 0.08 |
mm4_intergenic_Gm14243|Gm5270_chr2_161244091_R | GTCTCGTGGGCTCGGGCTCCCATGAAGTCAGCCTT | 60.0 | 0.08 |
mm4_intron_Nsmce2_chr15_59560928_F | Primer3: not found at this Tm | N.d. | 0.08 |
mm4_intron_Nsmce2_chr15_59560928_R | Primer3: not found at this Tm | N.d. | 0.08 |
mm4_intron_Rnf128_chrX_139586631_F | Primer3: not found at this Tm | N.d. | 0.08 |
mm4_intron_Rnf128_chrX_139586631_R | Primer3: not found at this Tm | N.d. | 0.08 |
mm3_intron_Prkag2_chr5_25038886_F | TCGTCGGCAGCGTCGCCCATCAGCTGGTAGAACA | 59.7 | 0.08 |
mm3_intron_Prkag2_chr5_25038886_R | GTCTCGTGGGCTCGGGACAGACAACCTGAGGCCTC | 60.0 | 0.08 |
mm4_intergenic_3100002H09Rik|RP23-230F2.8_chr4_124627493_F | TCGTCGGCAGCGTCAGACACAGATATAAATGCAGGCA | 57.9 | 0.08 |
mm4_intergenic_3100002H09Rik|RP23-230F2.8_chr4_124627493_R | GTCTCGTGGGCTCGGCTCTGGAGGTCACTCTGTGC | 59.7 | 0.08 |
mm4_intron_Lef1_chr3_131118303_F | TCGTCGGCAGCGTCGAGATTCCAGCTGTGGCCAA | 60.3 | 0.08 |
mm4_intron_Lef1_chr3_131118303_R | GTCTCGTGGGCTCGGGGCAAAGGCAGTTCTCCTGA | 60.2 | 0.08 |
mm4_intergenic_Olfr885|Olfr887_chr9_38070191_F | Primer3: not found at this Tm | N.d. | 0.08 |
mm4_intergenic_Olfr885|Olfr887_chr9_38070191_R | Primer3: not found at this Tm | N.d. | 0.08 |
mm4_intergenic_Eed/Gm26529|Gm5341_chr7_89984812_F | Primer3: not found at this Tm | N.d. | 0.08 |
mm4_intergenic_Eed/Gm26529|Gm5341_chr7_89984812_R | Primer3: not found at this Tm | N.d. | 0.08 |
mm4_intron_Fam53b_chr7_132799723_F | TCGTCGGCAGCGTCGTTCCTGACACAGCTCAGCT | 59.9 | 0.08 |
mm4_intron_Fam53b_chr7_132799723_R | GTCTCGTGGGCTCGGGCACTAACCACCCTCTGACC | 60.0 | 0.08 |
mm4_intergenic_Sema6a|Gm5506_chr18_47713419_F | TCGTCGGCAGCGTCTGGAAGTTACAAAGGAATGGGGA | 59.6 | 0.08 |
mm4_intergenic_Sema6a|Gm5506_chr18_47713419_R | GTCTCGTGGGCTCGGCTCACCCCTGACCCCATTTC | 60.0 | 0.08 |
mm4_intron_Gna14_chr19_16470515_F | Primer3: not found at this Tm | N.d. | 0.08 |
mm4_intron_Gna14_chr19_16470515_R | Primer3: not found at this Tm | N.d. | 0.08 |
mm4_intron_Tmtc4_chr14_122949808_F | Primer3: not found at this Tm | N.d. | 0.08 |
mm4_intron_Tmtc4_chr14_122949808_R | Primer3: not found at this Tm | N.d. | 0.08 |
mm4_intron_Fam71f1_chr6_29319729_F | Primer3: not found at this Tm | N.d. | 0.07 |
mm4_intron_Fam71f1_chr6_29319729_R | Primer3: not found at this Tm | N.d. | 0.07 |
mm4_intergenic_Agtr1b|Gm7488_chr3_20977288_F | Primer3: not found at this Tm | N.d. | 0.07 |
mm4_intergenic_Agtr1b|Gm7488_chr3_20977288_R | Primer3: not found at this Tm | N.d. | 0.07 |
mm4_intergenic_Smoc2|Thbs2_chr17_14492423_F | Primer3: not found at this Tm | N.d. | 0.07 |
mm4_intergenic_Smoc2|Thbs2_chr17_14492423_R | Primer3: not found at this Tm | N.d. | 0.07 |
mm4_intergenic_Areg|Gm23092_chr5_91169079_F | Primer3: not found at this Tm | N.d. | 0.07 |
mm4_intergenic_Areg|Gm23092_chr5_91169079_R | Primer3: not found at this Tm | N.d. | 0.07 |
mm4_intergenic_Gm12450|Spag17_chr3_99876951_F | Primer3: not found at this Tm | N.d. | 0.07 |
mm4_intergenic_Gm12450|Spag17_chr3_99876951_R | Primer3: not found at this Tm | N.d. | 0.07 |
mm3_intergenic_Scgb2b12|Scgb1b29_chr7_32428599_F | Primer3: not found at this Tm | N.d. | 0.07 |
mm3_intergenic_Scgb2b12|Scgb1b29_chr7_32428599_R | Primer3: not found at this Tm | N.d. | 0.07 |
mm3_intergenic_Scgb1b3|Scgb2b7_chr7_31692032_F | Primer3: not found at this Tm | N.d. | 0.07 |
mm3_intergenic_Scgb1b3|Scgb2b7_chr7_31692032_R | Primer3: not found at this Tm | N.d. | 0.07 |
mm4_intergenic_Nell1|Ano5_chr7_51390745_F | TCGTCGGCAGCGTCATATCTTGGTGGTTAGCTCCTTT | 57.2 | 0.07 |
mm4_intergenic_Nell1|Ano5_chr7_51390745_R | GTCTCGTGGGCTCGGGCTCCCACTGTGATACTTCCA | 59.4 | 0.07 |
mm4_intron_Dcc_chr18_71606376_F | Primer3: not found at this Tm | N.d. | 0.07 |
mm4_intron_Dcc_chr18_71606376_R | Primer3: not found at this Tm | N.d. | 0.07 |
mm4_intergenic_Gm11680|BC006965_chr11_112253032_F | TCGTCGGCAGCGTCGACCCAGAGGAACAAAGGCA | 59.8 | 0.07 |
mm4_intergenic_Gm11680|BC006965_chr11_112253032_R | GTCTCGTGGGCTCGGTCCCTAGTCTGAGTGCCCAA | 59.8 | 0.07 |
mm4_intron_Nol4_chr18_22898453_F | Primer3: not found at this Tm | N.d. | 0.07 |
mm4_intron_Nol4_chr18_22898453_R | Primer3: not found at this Tm | N.d. | 0.07 |
mm4_exon_Aurkb_chr11_69047988_F | Primer3: not found at this Tm | N.d. | 0.07 |
mm4_exon_Aurkb_chr11_69047988_R | Primer3: not found at this Tm | N.d. | 0.07 |
mm4_intergenic_Tbc1d22a|Gm23416_chr15_86725713_F | Primer3: not found at this Tm | N.d. | 0.06 |
mm4_intergenic_Tbc1d22a|Gm23416_chr15_86725713_R | Primer3: not found at this Tm | N.d. | 0.06 |
mm4_intergenic_Atg5|Prdm1_chr10_44367291_F | TCGTCGGCAGCGTCTTCAGCCTCCCTTTGAGCAG | 59.9 | 0.06 |
mm4_intergenic_Atg5|Prdm1_chr10_44367291_R | GTCTCGTGGGCTCGGCTTTTCAGACGCAACGCCTC | 60.1 | 0.06 |
mm4_intergenic_Ano6|D030018L15Rik_chr15_96044457_F | TCGTCGGCAGCGTCGAGCAATGGAGGTGGAACCA | 59.9 | 0.06 |
mm4_intergenic_Ano6|D030018L15Rik_chr15_96044457_R | GTCTCGTGGGCTCGGACACAGTTAATACACCCATTCCCA | 59.9 | 0.06 |
mm4_intergenic_Unc13c|n-R5s86_chr9_73969693_F | TCGTCGGCAGCGTCGGCTGAGAATTGAATGGGGC | 59.2 | 0.06 |
mm4_intergenic_Unc13c|n-R5s86_chr9_73969693_R | GTCTCGTGGGCTCGGTGTTTCAACAGGAGGGTTAGAGG | 59.9 | 0.06 |
mm4_intergenic_Gm25096|Gm25634_chr1_35407301_F | Primer3: not found at this Tm | N.d. | 0.06 |
mm4_intergenic_Gm25096|Gm25634_chr1_35407301_R | Primer3: not found at this Tm | N.d. | 0.06 |
mm3_intergenic_Gm26002|Itgb1_chr8_128674560_F | Primer3: not found at this Tm | N.d. | 0.06 |
mm3_intergenic_Gm26002|Itgb1_chr8_128674560_R | Primer3: not found at this Tm | N.d. | 0.06 |
mm4_intron_Mug1_chr6_121881422_F | Primer3: not found at this Tm | N.d. | 0.06 |
mm4_intron_Mug1_chr6_121881422_R | Primer3: not found at this Tm | N.d. | 0.06 |
mm4_intergenic_Mug1|Mug2_chr6_121949159_F | Primer3: not found at this Tm | N.d. | 0.06 |
mm4_intergenic_Mug1|Mug2_chr6_121949159_R | Primer3: not found at this Tm | N.d. | 0.06 |
mm3_intergenic_March11|Fbxl7_chr15_26430809_F | Primer3: not found at this Tm | N.d. | 0.06 |
mm3_intergenic_March11|Fbxl7_chr15_26430809_R | Primer3: not found at this Tm | N.d. | 0.06 |
mm4_intergenic_Gm13203|Casz1_chr4_148793778_F | Primer3: not found at this Tm | N.d. | 0.06 |
mm4_intergenic_Gm13203|Casz1_chr4_148793778_R | Primer3: not found at this Tm | N.d. | 0.06 |
mm4_intron_Cgnl1_chr9_71759494_F | TCGTCGGCAGCGTCCTAGCCAGGGTCTTCCTTGC | 60.1 | 0.06 |
mm4_intron_Cgnl1_chr9_71759494_R | GTCTCGTGGGCTCGGTCTGCTGTACCTGAGCAACC | 59.6 | 0.06 |
mm4_intergenic_Adra1b|Gm12153_chr11_43930079_F | TCGTCGGCAGCGTCACTCCCTTCTGTTTCCAGGG | 58.9 | 0.06 |
mm4_intergenic_Adra1b|Gm12153_chr11_43930079_R | GTCTCGTGGGCTCGGTCCTGGGATTGGGCTACTGA | 59.9 | 0.06 |
mm4_intergenic_Gm23539|Gm24184_chr8_31606408_F | Primer3: not found at this Tm | N.d. | 0.06 |
mm4_intergenic_Gm23539|Gm24184_chr8_31606408_R | Primer3: not found at this Tm | N.d. | 0.06 |
mm4_intron_Asah2_chr19_32061214_F | Primer3: not found at this Tm | N.d. | 0.06 |
mm4_intron_Asah2_chr19_32061214_R | Primer3: not found at this Tm | N.d. | 0.06 |
mm4_intergenic_Gm24503|Ccrn4l_chr3_50942322_F | TCGTCGGCAGCGTCGGATCAGAACCAGCAGAGCA | 59.7 | 0.06 |
mm4_intergenic_Gm24503|Ccrn4l_chr3_50942322_R | GTCTCGTGGGCTCGGTGGATGGAGTAGCAGCTGGA | 60.3 | 0.06 |
mm3_intron_Stard8_chrX_99052739_F | TCGTCGGCAGCGTCCGAGCCTCAGGTAGGATGC | 59.6 | 0.06 |
mm3_intron_Stard8_chrX_99052739_R | GTCTCGTGGGCTCGGTGGTGCTCTCAATGCAGTGT | 59.8 | 0.06 |
mm4_intron_Aars_chr8_111052087_F | Primer3: not found at this Tm | N.d. | 0.05 |
mm4_intron_Aars_chr8_111052087_R | Primer3: not found at this Tm | N.d. | 0.05 |
mm4_intergenic_Gm9162|Scgb2b19_chr7_33266732_F | Primer3: not found at this Tm | N.d. | 0.05 |
mm4_intergenic_Gm9162|Scgb2b19_chr7_33266732_R | Primer3: not found at this Tm | N.d. | 0.05 |
mm4_intergenic_Gm9135|Scgb2b12_chr7_32313702_F | Primer3: not found at this Tm | N.d. | 0.05 |
mm4_intergenic_Gm9135|Scgb2b12_chr7_32313702_R | Primer3: not found at this Tm | N.d. | 0.05 |
mm4_intron_Csmd3_chr15_47951349_F | Primer3: not found at this Tm | N.d. | 0.05 |
mm4_intron_Csmd3_chr15_47951349_R | Primer3: not found at this Tm | N.d. | 0.05 |
mm3_exon_Cacna1b_chr2_24605737_F | TCGTCGGCAGCGTCTCATCCACGATGCTCAGAGC | 59.8 | 0.05 |
mm3_exon_Cacna1b_chr2_24605737_R | GTCTCGTGGGCTCGGTGTATGTTTCTACCCTGCCTGG | 59.7 | 0.05 |
mm4_intron_Fbln1_chr15_85266104_F | Primer3: not found at this Tm | N.d. | 0.05 |
mm4_intron_Fbln1_chr15_85266104_R | Primer3: not found at this Tm | N.d. | 0.05 |
mm4_intergenic_Scgb2b17|Gm9162_chr7_33108318_F | Primer3: not found at this Tm | N.d. | 0.05 |
mm4_intergenic_Scgb2b17|Gm9162_chr7_33108318_R | Primer3: not found at this Tm | N.d. | 0.05 |
mm4_intergenic_Scgb2b12|Scgb1b29_chr7_32400970_F | Primer3: not found at this Tm | N.d. | 0.05 |
mm4_intergenic_Scgb2b12|Scgb1b29_chr7_32400970_R | Primer3: not found at this Tm | N.d. | 0.05 |
mm4_intergenic_Gm9167|Scgb2b20_chr7_33352450_F | Primer3: not found at this Tm | N.d. | 0.05 |
mm4_intergenic_Gm9167|Scgb2b20_chr7_33352450_R | Primer3: not found at this Tm | N.d. | 0.05 |
mm4_intergenic_Gm5329|Gm9135_chr7_32142892_F | Primer3: not found at this Tm | N.d. | 0.05 |
mm4_intergenic_Gm5329|Gm9135_chr7_32142892_R | Primer3: not found at this Tm | N.d. | 0.05 |
mm4_intergenic_Gm5329|Gm9135_chr7_32087121_F | Primer3: not found at this Tm | N.d. | 0.05 |
mm4_intergenic_Gm5329|Gm9135_chr7_32087121_R | Primer3: not found at this Tm | N.d. | 0.05 |
mm4_intergenic_Gm4398|Scgb2b15_chr7_32822811_F | Primer3: not found at this Tm | N.d. | 0.05 |
mm4_intergenic_Gm4398|Scgb2b15_chr7_32822811_R | Primer3: not found at this Tm | N.d. | 0.05 |
mm4_intergenic_Gm25817|Scgb2b17_chr7_33049714_F | Primer3: not found at this Tm | N.d. | 0.05 |
mm4_intergenic_Gm25817|Scgb2b17_chr7_33049714_R | Primer3: not found at this Tm | N.d. | 0.05 |
mm4_intron_Kcnmb2_chr3_31945243_F | Primer3: not found at this Tm | N.d. | 0.05 |
mm4_intron_Kcnmb2_chr3_31945243_R | Primer3: not found at this Tm | N.d. | 0.05 |
mm3_intergenic_9330198N18Rik|Gm14486_chr2_30656704_F | Primer3: not found at this Tm | N.d. | 0.05 |
mm3_intergenic_9330198N18Rik|Gm14486_chr2_30656704_R | Primer3: not found at this Tm | N.d. | 0.05 |
mm4_exon_9130213A22Rik/Hes7_chr11_69121092_F | TCGTCGGCAGCGTCTTGAGTCGTTGGTTCCGGAG | 59.9 | 0.05 |
mm4_exon_9130213A22Rik/Hes7_chr11_69121092_R | GTCTCGTGGGCTCGGCGCGCGATAGAGACCTAAGG | 60.1 | 0.05 |
mm4_intergenic_Gm12159|Gm12160_chr11_45138607_F | TCGTCGGCAGCGTCTAAAGTGATGGGGAGCTGGC | 59.7 | 0.05 |
mm4_intergenic_Gm12159|Gm12160_chr11_45138607_R | GTCTCGTGGGCTCGGTAATGTGGAGGTTGTCGCCC | 60.0 | 0.05 |
mm4_intergenic_Gm13044|Gm13041_chr4_143496426_F | TCGTCGGCAGCGTCGGGTGGAGACTTCATCATTCCA | 59.7 | 0.05 |
mm4_intergenic_Gm13044|Gm13041_chr4_143496426_R | GTCTCGTGGGCTCGGAGGCTCAGAGTGTCTTGTGC | 59.9 | 0.05 |
mm4_intron_Mtus1_chr8_41107779_F | Primer3: not found at this Tm | N.d. | 0.05 |
mm4_intron_Mtus1_chr8_41107779_R | Primer3: not found at this Tm | N.d. | 0.05 |
mm4_intron_Bmp7_chr2_172894007_F | Primer3: not found at this Tm | N.d. | 0.05 |
mm4_intron_Bmp7_chr2_172894007_R | Primer3: not found at this Tm | N.d. | 0.05 |
mm4_intron_Map4k3_chr17_80597739_F | TCGTCGGCAGCGTCGAGTGGACACGGCATAGGAA | 59.4 | 0.05 |
mm4_intron_Map4k3_chr17_80597739_R | GTCTCGTGGGCTCGGTGAGAGCAGAAGCCTCTCCT | 59.9 | 0.05 |
mm4_intron_Tmem182_chr1_40846922_F | TCGTCGGCAGCGTCAGCAACCATCAAGAGCTCTGA | 59.3 | 0.05 |
mm4_intron_Tmem182_chr1_40846922_R | GTCTCGTGGGCTCGGTGGCAGGAGCTGAATAACCA | 59.0 | 0.05 |
mm4_intergenic_Plb1|Gm5864_chr5_32403617_F | TCGTCGGCAGCGTCAGGGGAATGAGAGCTAAAGGG | 58.8 | 0.05 |
mm4_intergenic_Plb1|Gm5864_chr5_32403617_R | GTCTCGTGGGCTCGGCCAGCCCCTGACAACTGATG | 60.6 | 0.05 |
mm3_intron_Pepd_chr7_34985408_F | Primer3: not found at this Tm | N.d. | 0.04 |
mm3_intron_Pepd_chr7_34985408_R | Primer3: not found at this Tm | N.d. | 0.04 |
mm4_intergenic_Gm10679|Gm10678_chr7_15436275_F | Primer3: not found at this Tm | N.d. | 0.04 |
mm4_intergenic_Gm10679|Gm10678_chr7_15436275_R | Primer3: not found at this Tm | N.d. | 0.04 |
mm4_intron_Slc39a12_chr2_14440929_F | Primer3: not found at this Tm | N.d. | 0.04 |
mm4_intron_Slc39a12_chr2_14440929_R | Primer3: not found at this Tm | N.d. | 0.04 |
mm4_intron_Slc39a12_chr2_14416396_F | Primer3: not found at this Tm | N.d. | 0.04 |
mm4_intron_Slc39a12_chr2_14416396_R | Primer3: not found at this Tm | N.d. | 0.04 |
mm4_intergenic_Morc2b|Olfr55_chr17_33141257_F | Primer3: not found at this Tm | N.d. | 0.04 |
mm4_intergenic_Morc2b|Olfr55_chr17_33141257_R | Primer3: not found at this Tm | N.d. | 0.04 |
mm4_intron_Kat6a_chr8_22860281_F | Primer3: not found at this Tm | N.d. | 0.04 |
mm4_intron_Kat6a_chr8_22860281_R | Primer3: not found at this Tm | N.d. | 0.04 |
mm4_intergenic_Mir124a-3/Gm27032|Ythdf1_chr2_180897609_F | Primer3: not found at this Tm | N.d. | 0.04 |
mm4_intergenic_Mir124a-3/Gm27032|Ythdf1_chr2_180897609_R | Primer3: not found at this Tm | N.d. | 0.04 |
mm4_intergenic_Rab11fip1|Got1l1_chr8_27178554_F | Primer3: not found at this Tm | N.d. | 0.04 |
mm4_intergenic_Rab11fip1|Got1l1_chr8_27178554_R | Primer3: not found at this Tm | N.d. | 0.04 |
mm4_intergenic_Gm4906|Gm14515_chrX_11599813_F | Primer3: not found at this Tm | N.d. | 0.04 |
mm4_intergenic_Gm4906|Gm14515_chrX_11599813_R | Primer3: not found at this Tm | N.d. | 0.04 |
mm4_intergenic_Gm24443|Gm22529_chr6_25092213_F | Primer3: not found at this Tm | N.d. | 0.04 |
mm4_intergenic_Gm24443|Gm22529_chr6_25092213_R | Primer3: not found at this Tm | N.d. | 0.04 |
mm4_intergenic_Slc7a1|Ubl3_chr5_148424343_F | TCGTCGGCAGCGTCTTCAGCAATCTGTAAACTCATGG | 57.1 | 0.04 |
mm4_intergenic_Slc7a1|Ubl3_chr5_148424343_R | GTCTCGTGGGCTCGGGACCACCACCACCAGCAATA | 59.9 | 0.04 |
mm4_intron_Mylip_chr13_45400816_F | Primer3: not found at this Tm | N.d. | 0.04 |
mm4_intron_Mylip_chr13_45400816_R | Primer3: not found at this Tm | N.d. | 0.04 |
mm4_intron_Tmprss11a_chr5_86458012_F | Primer3: not found at this Tm | N.d. | 0.04 |
mm4_intron_Tmprss11a_chr5_86458012_R | Primer3: not found at this Tm | N.d. | 0.04 |
mm4_intron_Tbkbp1_chr11_97148916_F | Primer3: not found at this Tm | N.d. | 0.04 |
mm4_intron_Tbkbp1_chr11_97148916_R | Primer3: not found at this Tm | N.d. | 0.04 |
mm4_intron_Clstn2_chr9_97738135_F | TCGTCGGCAGCGTCCCCCTTCACCCCTTCAACAT | 59.5 | 0.04 |
mm4_intron_Clstn2_chr9_97738135_R | GTCTCGTGGGCTCGGTGCTGACACACATCATAGAGG | 57.4 | 0.04 |
mm4_intergenic_Gm23624|4930593C16Rik_chr9_120858588_F | Primer3: not found at this Tm | N.d. | 0.04 |
mm4_intergenic_Gm23624|4930593C16Rik_chr9_120858588_R | Primer3: not found at this Tm | N.d. | 0.04 |
mm4_intron_Slc25a13_chr6_6203698_F | Primer3: not found at this Tm | N.d. | 0.04 |
mm4_intron_Slc25a13_chr6_6203698_R | Primer3: not found at this Tm | N.d. | 0.04 |
mm4_intron_Siae_chr9_37622123_F | TCGTCGGCAGCGTCGAGGTTGACAGCAGTGATCCA | 59.9 | 0.03 |
mm4_intron_Siae_chr9_37622123_R | GTCTCGTGGGCTCGGCTTGAGGTTCTGCGACACCA | 60.2 | 0.03 |
mm4_intergenic_Gm7745|Lrfn5_chr12_61474652_F | TCGTCGGCAGCGTCTGGTCTCCTACATCTTCTGGGA | 59.6 | 0.03 |
mm4_intergenic_Gm7745|Lrfn5_chr12_61474652_R | GTCTCGTGGGCTCGGAGCCGCCGTCTTACCATATG | 59.9 | 0.03 |
mm4_intergenic_RP23-175E16.1|RP24-225I21.1/Kirrel3_chr9_34427173_F | Primer3: not found at this Tm | N.d. | 0.03 |
mm4_intergenic_RP23-175E16.1|RP24-225I21.1/Kirrel3_chr9_34427173_R | Primer3: not found at this Tm | N.d. | 0.03 |
mm4_intergenic_Ahctf1/Gm10518|Cdc42bpa_chr1_179878765_F | Primer3: not found at this Tm | N.d. | 0.03 |
mm4_intergenic_Ahctf1/Gm10518|Cdc42bpa_chr1_179878765_R | Primer3: not found at this Tm | N.d. | 0.03 |
mm4_intergenic_Wipf2|Cdc6_chr11_98907461_F | TCGTCGGCAGCGTCTTCATGCCATACAGGACCGC | 60.4 | 0.03 |
mm4_intergenic_Wipf2|Cdc6_chr11_98907461_R | GTCTCGTGGGCTCGGACGTCCTCATTCTACTGGGC | 59.1 | 0.03 |
mm4_intergenic_Gm26262|Trim36_chr18_46050944_F | Primer3: not found at this Tm | N.d. | 0.03 |
mm4_intergenic_Gm26262|Trim36_chr18_46050944_R | Primer3: not found at this Tm | N.d. | 0.03 |
mm4_intron_Gm12153_chr11_44099159_F | TCGTCGGCAGCGTCGCCGTCAAGAAGCCTTTGTC | 59.7 | 0.03 |
mm4_intron_Gm12153_chr11_44099159_R | GTCTCGTGGGCTCGGTGGGAGAACAGGTATGGGCT | 60.2 | 0.03 |
mm3_intron_Litaf_chr16_10991762_F | Primer3: not found at this Tm | N.d. | 0.03 |
mm3_intron_Litaf_chr16_10991762_R | Primer3: not found at this Tm | N.d. | 0.03 |
mm4_intron_Ggct_chr6_54990674_F | TCGTCGGCAGCGTCTGTCATTCCGTCCGCTTCAA | 59.9 | 0.03 |
mm4_intron_Ggct_chr6_54990674_R | GTCTCGTGGGCTCGGAATGGGGAGTAGAGGTGGGA | 59.2 | 0.03 |
mm4_intergenic_Olfr596|Olfr597_chr7_103314112_F | Primer3: not found at this Tm | N.d. | 0.03 |
mm4_intergenic_Olfr596|Olfr597_chr7_103314112_R | Primer3: not found at this Tm | N.d. | 0.03 |
mm4_intron_Anxa1_chr19_20387334_F | TCGTCGGCAGCGTCCAAAGCACTGTTCAGGTGGC | 59.9 | 0.03 |
mm4_intron_Anxa1_chr19_20387334_R | GTCTCGTGGGCTCGGGGAGGAAAGAAACAAAGTCTTCCA | 59.1 | 0.03 |
mm4_intergenic_B230112J18Rik|4930562A09Rik_chr5_116341871_F | Primer3: not found at this Tm | N.d. | 0.03 |
mm4_intergenic_B230112J18Rik|4930562A09Rik_chr5_116341871_R | Primer3: not found at this Tm | N.d. | 0.03 |
mm4_intergenic_Fbp1|2010111I01Rik_chr13_62910374_F | Primer3: not found at this Tm | N.d. | 0.03 |
mm4_intergenic_Fbp1|2010111I01Rik_chr13_62910374_R | Primer3: not found at this Tm | N.d. | 0.03 |
mm4_intergenic_Gm4784|Gm4991_chrX_109692428_F | Primer3: not found at this Tm | N.d. | 0.02 |
mm4_intergenic_Gm4784|Gm4991_chrX_109692428_R | Primer3: not found at this Tm | N.d. | 0.02 |
mm4_intergenic_Gm26153|Jam2_chr16_84756428_F | Primer3: not found at this Tm | N.d. | 0.02 |
mm4_intergenic_Gm26153|Jam2_chr16_84756428_R | Primer3: not found at this Tm | N.d. | 0.02 |
mm4_intergenic_Gm15323|Ankrd55_chr13_112045797_F | Primer3: not found at this Tm | N.d. | 0.02 |
mm4_intergenic_Gm15323|Ankrd55_chr13_112045797_R | Primer3: not found at this Tm | N.d. | 0.02 |
mm4_intron_Nuak2_chr1_132329646_F | TCGTCGGCAGCGTCTTTACCCATGCAGGTCCACC | 59.9 | 0.02 |
mm4_intron_Nuak2_chr1_132329646_R | GTCTCGTGGGCTCGGAAAGCCCTCAGTAGGCAAGC | 60.3 | 0.02 |
mm4_intergenic_Gm12350|Akirin2_chr4_34525230_F | Primer3: not found at this Tm | N.d. | 0.02 |
mm4_intergenic_Gm12350|Akirin2_chr4_34525230_R | Primer3: not found at this Tm | N.d. | 0.02 |
mm3_intron_Akap6_chr12_52853474_F | TCGTCGGCAGCGTCGCTTTGAACCTCAGTGTAGCC | 59.1 | 0.02 |
mm3_intron_Akap6_chr12_52853474_R | GTCTCGTGGGCTCGGGGGCTGCTTTAAAGTGGCAC | 60.0 | 0.02 |
mm4_intron_Alk_chr17_71916765_F | TCGTCGGCAGCGTCCTTGATTGGCAGCGTAGACG | 59.3 | 0.02 |
mm4_intron_Alk_chr17_71916765_R | GTCTCGTGGGCTCGGGACTGACTGCAGACCCTCAC | 60.0 | 0.02 |
mm4_intron_Erc2_chr14_28071436_F | Primer3: not found at this Tm | N.d. | 0.02 |
mm4_intron_Erc2_chr14_28071436_R | Primer3: not found at this Tm | N.d. | 0.02 |
mm4_intron_Jakmip2_chr18_43589313_F | Primer3: not found at this Tm | N.d. | 0.02 |
mm4_intron_Jakmip2_chr18_43589313_R | Primer3: not found at this Tm | N.d. | 0.02 |
mm4_intron_Sgcd_chr11_47593388_F | TCGTCGGCAGCGTCGGAATCCTCAGAATCCTGTGAA | 57.5 | 0.02 |
mm4_intron_Sgcd_chr11_47593388_R | GTCTCGTGGGCTCGGAGACTTGCATGTGTTTGGGA | 57.6 | 0.02 |
mm4_intergenic_Snx6|Cfl2_chr12_54852690_F | TCGTCGGCAGCGTCGGTCATCATTCCCTCCCTGC | 60.1 | 0.02 |
mm4_intergenic_Snx6|Cfl2_chr12_54852690_R | GTCTCGTGGGCTCGGTACTGCCTGGGCTAAACAGC | 60.0 | 0.02 |
mm4_intergenic_Gm24981|Gm20667_chr14_67639238_F | Primer3: not found at this Tm | N.d. | 0.02 |
mm4_intergenic_Gm24981|Gm20667_chr14_67639238_R | Primer3: not found at this Tm | N.d. | 0.02 |
mm3_exon_Baiap2_chr11_119960252_F | Primer3: not found at this Tm | N.d. | 0.02 |
mm3_exon_Baiap2_chr11_119960252_R | Primer3: not found at this Tm | N.d. | 0.02 |
mm4_intergenic_Auts2|Gm25722_chr5_132709617_F | TCGTCGGCAGCGTCAGAAGCCCTGTCCTACACCT | 59.8 | 0.02 |
mm4_intergenic_Auts2|Gm25722_chr5_132709617_R | GTCTCGTGGGCTCGGTAGCTTCACAGTCGTCCCTG | 59.1 | 0.02 |
mm4_intergenic_Agap1|Gm25180_chr1_89458033_F | Primer3: not found at this Tm | N.d. | 0.02 |
mm4_intergenic_Agap1|Gm25180_chr1_89458033_R | Primer3: not found at this Tm | N.d. | 0.02 |
mm4_intron_Stt3b_chr9_115300745_F | Primer3: not found at this Tm | N.d. | 0.02 |
mm4_intron_Stt3b_chr9_115300745_R | Primer3: not found at this Tm | N.d. | 0.02 |
mm4_intergenic_Gm16542|Fhit_chr14_10814198_F | TCGTCGGCAGCGTCCCACACATAAGAGACTCAGGCA | 59.7 | 0.02 |
mm4_intergenic_Gm16542|Fhit_chr14_10814198_R | GTCTCGTGGGCTCGGAGAGAATGCAAAGGCTGTGA | 57.4 | 0.02 |
mm4_exon_Smg7_chr1_152846122_F | TCGTCGGCAGCGTCGGAACACTGCCCCAAGGTTA | 59.8 | 0.02 |
mm4_exon_Smg7_chr1_152846122_R | GTCTCGTGGGCTCGGTCATCCCCATCCATCACCCT | 60.0 | 0.02 |
mm4_intergenic_Gm23980|Gm22810_chr15_24611897_F | Primer3: not found at this Tm | N.d. | 0.02 |
mm4_intergenic_Gm23980|Gm22810_chr15_24611897_R | Primer3: not found at this Tm | N.d. | 0.02 |
mm4_intron_Mrpl18_chr17_12912592_F | Primer3: not found at this Tm | N.d. | 0.02 |
mm4_intron_Mrpl18_chr17_12912592_R | Primer3: not found at this Tm | N.d. | 0.02 |
mm4_intergenic_9430091E24Rik|Glg1_chr8_111149848_F | Primer3: not found at this Tm | N.d. | 0.02 |
mm4_intergenic_9430091E24Rik|Glg1_chr8_111149848_R | Primer3: not found at this Tm | N.d. | 0.02 |
mm4_intergenic_Stxbp5l|Gtf2e1_chr16_37504032_F | TCGTCGGCAGCGTCTCTAGCAGCTTCCCTCAGGA | 59.6 | 0.01 |
mm4_intergenic_Stxbp5l|Gtf2e1_chr16_37504032_R | GTCTCGTGGGCTCGGCAGTTTTGTGTGTTGACTCGGT | 59.5 | 0.01 |
mm4_intergenic_Gm22011|Mthfr-ps1_chr5_77828352_F | Primer3: not found at this Tm | N.d. | 0.01 |
mm4_intergenic_Gm22011|Mthfr-ps1_chr5_77828352_R | Primer3: not found at this Tm | N.d. | 0.01 |
mm4_intergenic_Wfikkn2|Gm21885_chr11_94267228_F | Primer3: not found at this Tm | N.d. | 0.01 |
mm4_intergenic_Wfikkn2|Gm21885_chr11_94267228_R | Primer3: not found at this Tm | N.d. | 0.01 |
mm4_intron_Glis3_chr19_28287516_F | TCGTCGGCAGCGTCGGGGAGCTGGAATGACCTTA | 58.7 | 0.01 |
mm4_intron_Glis3_chr19_28287516_R | GTCTCGTGGGCTCGGAGGTGTGCATGAATGAGCAT | 57.8 | 0.01 |
mm4_intron_Spns2_chr11_72476547_F | TCGTCGGCAGCGTCACACCTCCTCTCTGTCCTGG | 60.2 | 0.01 |
mm4_intron_Spns2_chr11_72476547_R | GTCTCGTGGGCTCGGCTTGATGGACTGAGGGTGGC | 60.3 | 0.01 |
mm3_intron_Wfdc6a_chr2_164581362_F | Primer3: not found at this Tm | N.d. | 0.01 |
mm3_intron_Wfdc6a_chr2_164581362_R | Primer3: not found at this Tm | N.d. | 0.01 |
mm3_intergenic_Ltbp1|Rasgrp3_chr17_75422816_F | Primer3: not found at this Tm | N.d. | 0.01 |
mm3_intergenic_Ltbp1|Rasgrp3_chr17_75422816_R | Primer3: not found at this Tm | N.d. | 0.01 |
mm3_intergenic_Gm25832|Myl1_chr1_66873862_F | Primer3: not found at this Tm | N.d. | 0.01 |
mm3_intergenic_Gm25832|Myl1_chr1_66873862_R | Primer3: not found at this Tm | N.d. | 0.01 |
mm3_intergenic_Gm23649|Lclat1_chr17_73032781_F | Primer3: not found at this Tm | N.d. | 0.01 |
mm3_intergenic_Gm23649|Lclat1_chr17_73032781_R | Primer3: not found at this Tm | N.d. | 0.01 |
mm4_intergenic_P2ry4|Arr3_chrX_100600280_F | TCGTCGGCAGCGTCCCAGTGGGGTCATAGAAAACAGA | 59.9 | 0.01 |
mm4_intergenic_P2ry4|Arr3_chrX_100600280_R | GTCTCGTGGGCTCGGTGCATTTTGACCGTGTTCACA | 59.2 | 0.01 |
mm4_intergenic_Mir196a-1|Hoxb9_chr11_96271376_F | Primer3: not found at this Tm | N.d. | 0.01 |
mm4_intergenic_Mir196a-1|Hoxb9_chr11_96271376_R | Primer3: not found at this Tm | N.d. | 0.01 |
mm2_exon_Txndc15_chr13_55726131_F | TCGTCGGCAGCGTCAGTGTCGTCAAACAGGAAAGTG | 59.0 | 0.01 |
mm2_exon_Txndc15_chr13_55726131_R | GTCTCGTGGGCTCGGGTAGACCTGCACTTCCCGTC | 60.1 | 0.01 |
mm4_intergenic_Fam110b|Ubxn2b_chr4_6141457_F | Primer3: not found at this Tm | N.d. | 0.01 |
mm4_intergenic_Fam110b|Ubxn2b_chr4_6141457_R | Primer3: not found at this Tm | N.d. | 0.01 |
mm3_intergenic_Gm22548|Gm15669_chr1_67745393_F | Primer3: not found at this Tm | N.d. | 0.01 |
mm3_intergenic_Gm22548|Gm15669_chr1_67745393_R | Primer3: not found at this Tm | N.d. | 0.01 |
mm3_intergenic_n-R5s209|Gm7846_chr1_27190271_F | Primer3: not found at this Tm | N.d. | 0.01 |
mm3_intergenic_n-R5s209|Gm7846_chr1_27190271_R | Primer3: not found at this Tm | N.d. | 0.01 |
mm4_intergenic_Gm14108|Gm24221_chr2_148124663_F | TCGTCGGCAGCGTCTGCTCATGCACTTCCCTTAAG | 58.2 | 0.01 |
mm4_intergenic_Gm14108|Gm24221_chr2_148124663_R | GTCTCGTGGGCTCGGCAGAGCTGGAGAGAGAGGGT | 60.0 | 0.01 |
mm3_intergenic_Hmgcr|5S_rRNA_chr13_96801067_F | Primer3: not found at this Tm | N.d. | 0.01 |
mm3_intergenic_Hmgcr|5S_rRNA_chr13_96801067_R | Primer3: not found at this Tm | N.d. | 0.01 |
mm4_intergenic_Rpl21-ps5|Gm24508_chr16_84214753_F | Primer3: not found at this Tm | N.d. | 0.01 |
mm4_intergenic_Rpl21-ps5|Gm24508_chr16_84214753_R | Primer3: not found at this Tm | N.d. | 0.01 |
mm4_intergenic_AC100386.1|Gm8394_chr10_85300862_F | Primer3: not found at this Tm | N.d. | 0.01 |
mm4_intergenic_AC100386.1|Gm8394_chr10_85300862_R | Primer3: not found at this Tm | N.d. | 0.01 |
mm4_intron_Gda_chr19_21458917_F | TCGTCGGCAGCGTCGCCTTATTCCCTCCAGCTCC | 59.8 | 0.01 |
mm4_intron_Gda_chr19_21458917_R | GTCTCGTGGGCTCGGGGCACATGGAAAGAAAGACACA | 59.3 | 0.01 |
mm4_intergenic_Frk|Gm26341_chr10_34867495_F | Primer3: not found at this Tm | N.d. | 0.01 |
mm4_intergenic_Frk|Gm26341_chr10_34867495_R | Primer3: not found at this Tm | N.d. | 0.01 |
mm4_intergenic_Pigk|St6galnac5_chr3_152797767_F | TCGTCGGCAGCGTCGCCAAAGAAGTATGCTGCAAAC | 59.0 | 0.01 |
mm4_intergenic_Pigk|St6galnac5_chr3_152797767_R | GTCTCGTGGGCTCGGGGCTCTTTCATTTCTGAGGTTTGT | 59.7 | 0.01 |
mm4_intergenic_Gm14803|Gm9059_chrX_96956604_F | Primer3: not found at this Tm | N.d. | 0.01 |
mm4_intergenic_Gm14803|Gm9059_chrX_96956604_R | Primer3: not found at this Tm | N.d. | 0.01 |
mm4_intergenic_Eps8|Strap_chr6_137674619_F | Primer3: not found at this Tm | N.d. | 0.01 |
mm4_intergenic_Eps8|Strap_chr6_137674619_R | Primer3: not found at this Tm | N.d. | 0.01 |
mm4_intergenic_Gm8609|Gm22543_chr16_40227007_F | Primer3: not found at this Tm | N.d. | 0.01 |
mm4_intergenic_Gm8609|Gm22543_chr16_40227007_R | Primer3: not found at this Tm | N.d. | 0.01 |
mm4_intergenic_Gm25437|Gm22684_chr19_20010465_F | TCGTCGGCAGCGTCGCTCTGTGGGGTTGATTGGA | 59.9 | 0.01 |
mm4_intergenic_Gm25437|Gm22684_chr19_20010465_R | GTCTCGTGGGCTCGGTCGTGTTGCTTTCTTTCACTGG | 59.6 | 0.01 |
mm4_intergenic_Gm12080|Gm6685_chr11_28290907_F | TCGTCGGCAGCGTCATTTCACTCCTCCCTGTGCC | 59.6 | 0.01 |
mm4_intergenic_Gm12080|Gm6685_chr11_28290907_R | GTCTCGTGGGCTCGGCCTCACAGTGCCCTTCCTAG | 59.4 | 0.01 |
mm4_intergenic_RP23-32A8.1|Gm26176_chr7_73637574_F | Primer3: not found at this Tm | N.d. | 0.01 |
mm4_intergenic_RP23-32A8.1|Gm26176_chr7_73637574_R | Primer3: not found at this Tm | N.d. | 0.01 |
mm3_intergenic_Park2|Agpat4_chr17_11975031_F | Primer3: not found at this Tm | N.d. | 0.01 |
mm3_intergenic_Park2|Agpat4_chr17_11975031_R | Primer3: not found at this Tm | N.d. | 0.01 |
mm4_intergenic_Gm18822|Hey1_chr3_8629215_F | Primer3: not found at this Tm | N.d. | 0.01 |
mm4_intergenic_Gm18822|Hey1_chr3_8629215_R | Primer3: not found at this Tm | N.d. | 0.01 |
mm4_intergenic_Gm23674|Gm26106_chr18_26661309_F | Primer3: not found at this Tm | N.d. | 0.01 |
mm4_intergenic_Gm23674|Gm26106_chr18_26661309_R | Primer3: not found at this Tm | N.d. | 0.01 |
mm4_intergenic_4931417E11Rik|Gm26179_chr6_73510634_F | Primer3: not found at this Tm | N.d. | 0.01 |
mm4_intergenic_4931417E11Rik|Gm26179_chr6_73510634_R | Primer3: not found at this Tm | N.d. | 0.01 |
mm4_intergenic_Cdh10|Gm25976_chr15_19495033_F | Primer3: not found at this Tm | N.d. | 0.01 |
mm4_intergenic_Cdh10|Gm25976_chr15_19495033_R | Primer3: not found at this Tm | N.d. | 0.01 |
mm2_intergenic_2310031A07Rik/Med7|2310031A07Rik_chr11_46445798_F | Primer3: not found at this Tm | N.d. | 0.01 |
mm2_intergenic_2310031A07Rik/Med7|2310031A07Rik_chr11_46445798_R | Primer3: not found at this Tm | N.d. | 0.01 |
mm2_intron_Tyw5_chr1_57393218_F | Primer3: not found at this Tm | N.d. | 0.01 |
mm2_intron_Tyw5_chr1_57393218_R | Primer3: not found at this Tm | N.d. | 0.01 |
mm4_intron_Ptprk_chr10_28417242_F | Primer3: not found at this Tm | N.d. | 0.01 |
mm4_intron_Ptprk_chr10_28417242_R | Primer3: not found at this Tm | N.d. | 0.01 |
mm4_intergenic_Wdr61|Crabp1_chr9_54764624_F | TCGTCGGCAGCGTCCACCAGGGGAGAGCAAGTTC | 60.3 | 0.01 |
mm4_intergenic_Wdr61|Crabp1_chr9_54764624_R | GTCTCGTGGGCTCGGCGACTCCCCGCCCTAAGG | 61.5 | 0.01 |
mm3_intron_Bnc2_chr4_84337376_F | TCGTCGGCAGCGTCGAGGTCAGGAAACATGGCCT | 59.6 | 0.00 |
mm3_intron_Bnc2_chr4_84337376_R | GTCTCGTGGGCTCGGTGTTAGCGTTGGGACCTGTC | 59.9 | 0.00 |
mm4_intergenic_Gm15400|Gm15399_chr3_123946367_F | Primer3: not found at this Tm | N.d. | 0.00 |
mm4_intergenic_Gm15400|Gm15399_chr3_123946367_R | Primer3: not found at this Tm | N.d. | 0.00 |
mm3_intergenic_Gm22886|Klhl14_chr18_21459069_F | Primer3: not found at this Tm | N.d. | 0.00 |
mm3_intergenic_Gm22886|Klhl14_chr18_21459069_R | Primer3: not found at this Tm | N.d. | 0.00 |
mm4_intron_Gm20757_chr10_92232364_F | TCGTCGGCAGCGTCCAGCCCAAGGTCCACTGTAG | 60.0 | 0.00 |
mm4_intron_Gm20757_chr10_92232364_R | GTCTCGTGGGCTCGGACACAGACAACACCACAGAGT | 59.4 | 0.00 |
mm4_intron_Prss12_chr3_123503946_F | Primer3: not found at this Tm | N.d. | 0.00 |
mm4_intron_Prss12_chr3_123503946_R | Primer3: not found at this Tm | N.d. | 0.00 |
mm4_exon_Cyp2a5_chr7_26840917_F | TCGTCGGCAGCGTCCAATGTTCCCTGGCCTCCAT | 60.0 | 0.00 |
mm4_exon_Cyp2a5_chr7_26840917_R | GTCTCGTGGGCTCGGTTCCTGCCAATCACCCGATC | 60.1 | 0.00 |
mm4_intergenic_Ctnna3|Gm23854_chr10_64302614_F | Primer3: not found at this Tm | N.d. | 0.00 |
mm4_intergenic_Ctnna3|Gm23854_chr10_64302614_R | Primer3: not found at this Tm | N.d. | 0.00 |
mm4_intergenic_Gm9439|Gm14558_chrX_21532283_F | Primer3: not found at this Tm | N.d. | 0.00 |
mm4_intergenic_Gm9439|Gm14558_chrX_21532283_R | Primer3: not found at this Tm | N.d. | 0.00 |
mm4_intron_Mpp7_chr18_7506689_F | Primer3: not found at this Tm | N.d. | 0.00 |
mm4_intron_Mpp7_chr18_7506689_R | Primer3: not found at this Tm | N.d. | 0.00 |
mm4_intron_Trf_chr9_103207708_F | Primer3: not found at this Tm | N.d. | 0.00 |
mm4_intron_Trf_chr9_103207708_R | Primer3: not found at this Tm | N.d. | 0.00 |
mm4_intergenic_Dusp1|Gm8225_chr17_26514918_F | TCGTCGGCAGCGTCCTCACTGACCACACTGGACA | 59.2 | 0.00 |
mm4_intergenic_Dusp1|Gm8225_chr17_26514918_R | GTCTCGTGGGCTCGGGTTCCTTGTCTGCCCTGGAG | 60.3 | 0.00 |
mm4_intergenic_Ulk4|Trak1_chr9_121277700_F | Primer3: not found at this Tm | N.d. | 0.00 |
mm4_intergenic_Ulk4|Trak1_chr9_121277700_R | Primer3: not found at this Tm | N.d. | 0.00 |
mm4_intergenic_Api5|Gm13788_chr2_94560961_F | Primer3: not found at this Tm | N.d. | 0.00 |
mm4_intergenic_Api5|Gm13788_chr2_94560961_R | Primer3: not found at this Tm | N.d. | 0.00 |
mm4_exon_Cyp2a4_chr7_26312747_F | TCGTCGGCAGCGTCCAATGTTCCCTGGCCTCCAT | 60.0 | 0.00 |
mm4_exon_Cyp2a4_chr7_26312747_R | GTCTCGTGGGCTCGGTTCCTGCCAATCACCCGATC | 60.1 | 0.00 |
mm4_intron_Col6a6_chr9_105736097_F | TCGTCGGCAGCGTCTCCAAGTGACTTGTGTGGGG | 59.8 | 0.00 |
mm4_intron_Col6a6_chr9_105736097_R | GTCTCGTGGGCTCGGAGAGCCAGAAGATCCTCCCT | 59.3 | 0.00 |
mm4_intron_Ttpa_chr4_20027015_F | Primer3: not found at this Tm | N.d. | 0.00 |
mm4_intron_Ttpa_chr4_20027015_R | Primer3: not found at this Tm | N.d. | 0.00 |
mm4_intron_Tbc1d5_chr17_51006306_F | Primer3: not found at this Tm | N.d. | 0.00 |
mm4_intron_Tbc1d5_chr17_51006306_R | Primer3: not found at this Tm | N.d. | 0.00 |
mm4_intron_Ptprg_chr14_11606583_F | TCGTCGGCAGCGTCTCAGTTCCTGATTGGGAAAGCA | 59.8 | 0.00 |
mm4_intron_Ptprg_chr14_11606583_R | GTCTCGTGGGCTCGGTCCCAAGCTTCCACCAACAG | 60.1 | 0.00 |
mm4_intron_Plbd1_chr6_136649874_F | Primer3: not found at this Tm | N.d. | 0.00 |
mm4_intron_Plbd1_chr6_136649874_R | Primer3: not found at this Tm | N.d. | 0.00 |
mm4_intron_Nkain2_chr10_32862329_F | Primer3: not found at this Tm | N.d. | 0.00 |
mm4_intron_Nkain2_chr10_32862329_R | Primer3: not found at this Tm | N.d. | 0.00 |
mm4_intron_Acat1_chr9_53587806_F | TCGTCGGCAGCGTCCACACGGTGGCACTGAGTTA | 60.2 | 0.00 |
mm4_intron_Acat1_chr9_53587806_R | GTCTCGTGGGCTCGGACATTCAGCTTCGAGTGACTGT | 59.9 | 0.00 |
mm4_intron_Abcd2_chr15_91168443_F | TCGTCGGCAGCGTCGGGAAGGGCTCAGAGTTGAT | 59.0 | 0.00 |
mm4_intron_Abcd2_chr15_91168443_R | GTCTCGTGGGCTCGGATGAGCGTGGGGATATAGCC | 59.0 | 0.00 |
mm4_intergenic_Rbpsuh-rs3|Cntnap2_chr6_46545739_F | TCGTCGGCAGCGTCAATCAGAGGGTGAAGGGGCA | 60.8 | 0.00 |
mm4_intergenic_Rbpsuh-rs3|Cntnap2_chr6_46545739_R | GTCTCGTGGGCTCGGGCAGGGGCATAGAGTCCTTC | 59.8 | 0.00 |
mm4_intergenic_Olfr718-ps1|Rbak_chr5_143172144_F | Primer3: not found at this Tm | N.d. | 0.00 |
mm4_intergenic_Olfr718-ps1|Rbak_chr5_143172144_R | Primer3: not found at this Tm | N.d. | 0.00 |
mm4_intergenic_Med24|Thra_chr11_98735082_F | Primer3: not found at this Tm | N.d. | 0.00 |
mm4_intergenic_Med24|Thra_chr11_98735082_R | Primer3: not found at this Tm | N.d. | 0.00 |
mm4_intergenic_Iqcf5|Iqcf3_chr9_106534151_F | Primer3: not found at this Tm | N.d. | 0.00 |
mm4_intergenic_Iqcf5|Iqcf3_chr9_106534151_R | Primer3: not found at this Tm | N.d. | 0.00 |
mm4_intergenic_Gm8183|Tmem135_chr7_89046675_F | TCGTCGGCAGCGTCAGAGCAGGGATGGGAGGAAT | 60.0 | 0.00 |
mm4_intergenic_Gm8183|Tmem135_chr7_89046675_R | GTCTCGTGGGCTCGGTGCTCTTTTGGCTTCACAGC | 59.3 | 0.00 |
mm4_intergenic_Gm7627|Gm24120_chr7_69814368_F | Primer3: not found at this Tm | N.d. | 0.00 |
mm4_intergenic_Gm7627|Gm24120_chr7_69814368_R | Primer3: not found at this Tm | N.d. | 0.00 |
mm4_intergenic_Gm23662|Arntl_chr7_113140462_F | TCGTCGGCAGCGTCGCTCCACTCATGGCTCTCTC | 59.8 | 0.00 |
mm4_intergenic_Gm23662|Arntl_chr7_113140462_R | GTCTCGTGGGCTCGGTTGGTCTTCAGTCTCCACGC | 59.9 | 0.00 |
mm4_intergenic_Gm17540|Gm21915_chr9_40555769_F | TCGTCGGCAGCGTCGGCCCCTTATCCTAAAGACTCC | 59.6 | 0.00 |
mm4_intergenic_Gm17540|Gm21915_chr9_40555769_R | GTCTCGTGGGCTCGGAGGACTTCCTGATGCTGGGA | 60.2 | 0.00 |
mm4_intergenic_Gm13508|Gm25215_chr2_49369812_F | TCGTCGGCAGCGTCCTTTGGCACTCAGAGGGGAA | 59.5 | 0.00 |
mm4_intergenic_Gm13508|Gm25215_chr2_49369812_R | GTCTCGTGGGCTCGGTGAGGGTTTGTAGCTTACCACT | 59.0 | 0.00 |
mm4_intergenic_Ctnnd2|Gm26416_chr15_31190394_F | Primer3: not found at this Tm | N.d. | 0.00 |
mm4_intergenic_Ctnnd2|Gm26416_chr15_31190394_R | Primer3: not found at this Tm | N.d. | 0.00 |
mm4_intergenic_Aadac|Sucnr1_chr3_60072144_F | TCGTCGGCAGCGTCGTAAGGAGGACTGGTGCTACC | 59.5 | 0.00 |
mm4_intergenic_Aadac|Sucnr1_chr3_60072144_R | GTCTCGTGGGCTCGGGAGTGTCAGCCAGTCTCCAC | 60.0 | 0.00 |
mm4_intergenic_4930452L02Rik|Tekt3_chr11_63018631_F | TCGTCGGCAGCGTCCCTCCTACCCACTGACCCTT | 60.2 | 0.00 |
mm4_intergenic_4930452L02Rik|Tekt3_chr11_63018631_R | GTCTCGTGGGCTCGGAGATGCTCTGTGTGCTTGCT | 59.9 | 0.00 |
mm3_intron_A230009B12Rik_chr17_10476162_F | Primer3: not found at this Tm | N.d. | 0.00 |
mm3_intron_A230009B12Rik_chr17_10476162_R | Primer3: not found at this Tm | N.d. | 0.00 |
These only list off-targets that have primers in the table above. Primers underlined, off-targets in bold.
ontarget_mm0_exon_5730457N03Rik/Evx1_chr6_52313750 |
CGCATCACAAGGTGACCCTAGCTCCCCACTGCCATCTCCGCGGTCGCCGTCGACACGGCGCTGGGGCTACCCGGCGCCTG CCTTGTCGCCTTAGCTCCTCTTCTCAGCCAAGATCCCAGGGAGCCTGGGATTAGGAG |
mm4_intergenic_Tspan9|Gm10010_chr6_128168301 | ACACCATGTCTCAGCACAGGGCTGACCACAGCTTCTCTTCTCAGCCCCAACTCTCCTCTCAGTCATGTCCCCAACTCCC |
mm4_intergenic_Gm4691|Tead4_chr6_128223755 |
TACACACCACGTCTCAGCACAGGGCTGACCACAGCTTCTCTTCTCAGCCCCAACTCTCCTCTCAGTCATGTCCCCAACTC CC |
mm4_intron_4930433N12Rik_chr9_3178199 |
TTGGGTTGAGAGTTGGGGACATGACTAAGAGGAGAGTAGGGGCTGAGAAGAAAAGCTATGGTCAACCCTGTGGTGAGACA TAGTGTGTATAGGGAAGGAAAAGTTAGAGAAACAGGGGTGTGATTTGCTGT |
mm4_intergenic_Mapk4/Gm9925|Ska1_chr18_74093610 | TGGGGCTCAGAGAGATCACAAGAGATCATAGGTCAAGGCCCAGAAGAGGAGCTATGGAAACTAGACAGGTGTGCGAAGC |
mm4_intergenic_A630031M04Rik|1700112K13Rik_chr4_127666177 |
GATAAGACAGCAGGAGGGGCTGACGCAGGAGACGCCGCCGCTGCACGTGGGCCCCAGCTTCTCTTCCCAGCCCAGCACTG CTGATAGTGCCGTGGTTCT |
mm4_intergenic_Gm23315|Rprm_chr2_53984018 |
GACACTCCTGTCTGAACACACTAACCACAGCTCCTCTTCTGGGTCAAGTGGTGATGCTCACAGGAAGGTGGGGTCATTTT GTGGCCTGTGGAAAATGTGGA |
mm4_intergenic_Gm8513|Gm23755_chr13_45213446 |
TGCAAGCAAGAGCAATCCTTCCCTAGTTCCTCTTCTCTTTCAAGATGTAATAGGCTACAAGTCTCACTTTTATTGTTTCT TTGCACAGTCTGTTGTCTCCTGGCCTCTG |
mm4_intergenic_MIMT1_1|Mir3099_chr7_6797499 |
TCTGCAGGGTAGGGATGGATGGAGAGGTGGGGTGCATTTGGCAGGAGTAAGATAGGTCTCTGGGAAGAGAGGAATTGACA GATTAGAGGAGCTAAGGACTGAGAGTGGCCAGCCTTGACTTTGCAGGTGTG |
mm4_intron_Cyfip1_chr7_55880760 |
CCCAAGTCTTGAAGCTCCGTATACCTGGGTGGGAAGAGAAGCTAGGGGCTGCCTGAGCAGGTTAGTAACTGTTTGACCCC GGTCC |
mm4_exon_Pgd_chr4_149150553 |
GGAGCATGTGGTGGTTCAGAAACTATAGACCTCGGTGACTTCTTCAGCAATCACAGCCAACACTTGGCTAAGAGCAGGAA CTAGGGCAAAGGGGGGGTGCTGAGCGCCACGGGGCTGTCCTATTGCTGGGAGGGA |
mm3_intergenic_n-R5s82|Pknox2_chr9_37034020 |
TGGCATGATGGGACAACACTTCTGCCCAGCAGGTCTCAGAGACAAGGAGGACCCTAGCTCCTGTCCTCAGCCATGTAGCC AGCTTGTTCCCAAACAGGGCCATTTCTGTTACTCAAGGCAAAGCACTCCC |
mm4_intron_Bpi_chr2_158273089 |
TGTGCACTGGTGTCCATAGTCTTGCCTCTGGCCTGGCCCTTATCTCTTCTTCTCAGCCTGTAACAATCTCCCAATATCCT TTTCTCTCCTCGATGCAGTTATCAAATAATGGCAGATTCCAGCTGAACA |
mm4_intron_Il1rap_chr16_26683654 |
AGAAAAGAAAGAAGAGGGGAGAGTAAGAGAGTGGCTGAGAAGAGGAAATTAGGAGGAAGAAGACTAAGAGACTGAAGAAG ACTTAGCTGAATATTGTTTCACATATGTTATAAAACAGAGCAATAGAACACCAGA |
mm2_exon_Col20a1_chr2_180996450 |
CAGCCACTGGACATCACTGTCCACAACGTGCTGGACTTCCCTCAGCTGGACACCCTAGCTCCTCTGCTCAGCCGACTCAT TTGCCAAAAAATTCAGGGCAGAGGCCCAGGTAAGAACACAGCA |
mm4_intron_Gng2_chr14_19951276 |
AGAGATCAAACAGCATCCCACATTTTTTTAAAGTGAGCTTAGAAGAGGAGCTGGGGGACTGATGGCTGTGTACTAGTTGG TACACCCACCTCCTCGCTCCAGAGTAA |
mm4_intergenic_Nhsl2|Gm25828_chrX_101884431 |
TGGAAGGCCAAGGTGAGTTCTCAGTTCTGCCTCTCCCTCTCCTGGTTGAGAAGAAGAGCTTGGGCAGATTTGAATACTGT CCTGCTAGATGACTGCCAGG |
mm4_intergenic_Mageb17-ps|Gm14781_chrX_91626440 |
TGTCAGGACTCATCGCAGATCCATGGCCCATAGCTCCTCTTCTAAGCAGTGGAATGTGTTATGAGATAAAACTAATAAAT TTGCAACTTATTCTGTAATACATGAGAATTTGTATATGCATTTCCTTTGTTATTTTGCAA |
mm4_intergenic_Zfp42|Gm22986_chr8_43371620 |
GCACACTACAACTGCATTCCACCCCTAGCTCCCCTTCTCTTCTAATATTTCCTTTATAATAAACACATCGATTCTCCTTT ACTTTTTCTATGGTTTTTTTTCCTTTACTTTCTGTGTTTCCTGATGAATTCCA |
mm4_intergenic_Fau-ps1|Macrod2_chr2_141990996 | ATGCTCACTCACTGCATCCCACGCACCTTTGCTCCTTTTCTTTGCCAAGGCAATAGTGTGCCTCTTGGGGTG |
mm4_intergenic_Gm2373|5330416C01Rik_chr13_97669064 |
GCAGAGAGGAGCCAGGATTCATGAATATACTGGCTCACATTCTTTTCTGCTGGCATGCTTGAGAGGAGGAGCTAAGGCCT TGCTTGCTGAATTAGGGCGA |
mm4_intergenic_Gm23735|Fndc3a_chr14_72293762 |
GGTCACACCTGGGCACATTAGTAACCAGGTGTGTTCATATCCAGTCTGAGGCTCTTACCTCAGCTGGCCAGGGGTGTGAA GAGGAGCTAAGGACCCTGGAGGGTGGCAATGTCGACATCTGCT |
mm4_intron_Sin3a_chr9_57077134 |
TGTGATGCCACGCCCCTCCCGCCCCGCCCCCTCCGGGATTTCCGCCTCCTTAGCAGTGAAGAGGAGCTGGGGAAAGCCCG CTGTGGCGTCTGGCAGGGGGTCAGGGCTCCGTGTCTGCTCCTC |
mm4_intergenic_Rab8b|Rps27l_chr9_66933899 |
TCAGGCAGTTCAAGGTCCACACTGATGCTCTGGGCTGCCCTGCTGCTGCTACCCCAAGCTCCTCTCCCCAGCCGAGTTCT TTAAGCTGCTTGGACTTAAGCATCGAACATTCTACAGGCCTCTTCTCGGCAAATCAGGA |
mm4_intergenic_Tmem126b|Dlg2_chr7_90786429 |
TCCACTTGGAAGACAGTTCTGGGATGGGTGATAAGAGGAGATAGGGACAGAAGGAGAGGAAGAATAAAATGTTGACATTG AATGAATTCATATGAGAAGCAGGTGAGAATTCAC |
mm4_intron_Stx17_chr4_48130475 | TTGGAGTTCTGTTGCTGGTTACTTAGTAGATCACTTCGTCTAAGAAGAGGAGATAAGGGCCTTCCGTGAGAGGAGTTC |
mm4_intergenic_Gm13726|4930440I19Rik_chr2_77991656 |
AAATATGAAGTGAAAGGAAGGCCTTTAACCCTAGCTCCTCTCCTCCTTCAAGTCCCCTCTCTCTTAAATCTCTCACCCCA GAAAGGTAACACTGCA |
mm4_intergenic_Gm22913|Gm20091_chr10_96274608 |
GGGTTGCTTCTTAGATACCACCATTGGATGAGAATAAAAGCTAAGGTTTCTGTCAGTATACCAGCTAGAGGAAAAAAAAA TCACATAAAAGTTCTCTGTTCTCTTTAATGAAGTTTGCCAGGGAGAGTCTGA |
mm4_intergenic_Zdhhc17|Gm5428_chr10_111074014 |
CACCTGGCATTCCCATCTGATGGTGTAACCATTGTTCCTCTTCTTATCCAACACAGAGATAGTTATTTCCTCTTTGTGTC TGGCAGGAGC |
mm4_intergenic_Gm26235|Gm25392_chr18_19547593 |
TCCTTGGAAAACTCTAAAGCAGAGATATACAGTATGGAGATTCATAAANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNCCAACAAACCAATAAACAAGCTTTTAAAATCAGCCCT |
mm3_intergenic_AC107236.1|Gm8623_chr8_47613097 |
TACACGCATACCTGGCAGAGCCCTTGGCTGAGGAAAGGAGCAATGGGAGAGGCCCGACTTCGAGCAGAAAGACAAGAGAC TCACTCGGCCTTAGATGTGCTGAGTGTGGGACA |
mm4_intergenic_Gm24817|Apcs_chr1_172860126 |
AGGGAAAAGCTACCAAGGCACTGGCCACAGCCCGTTGCTGGCTCTGCCAAGCATCCTCTTGGTTTTGAAAAGGAGCTATG GCCCTCCATACATCCTGGCATCAAAGAAAGCCTCAGCTGATGAGGGTCTAGCC |
mm3_intergenic_1110051M20Rik|Gm13787_chr2_91325255 |
CAGAGACAGGCCAGATGGACTGCTCCCCATTGTCTAACTCCAGAGAGGCACAGCCACACGAGTGGCTGAGAACAGGAGCA ACGGGAAGGGAAGAGGGCTCAGAACATGCC |
mm4_intergenic_Fam154a|Gm26017_chr4_86507059 |
ATGGCTTTCTCCACACACCCCTAGCCCAGTCTGATCATCCATAGCTCTTCTACACAGCAAATGCCTTTTCTCTGACCAGC C |
mm3_intron_Celsr1_chr15_86005571 |
AACCTCCCTACTGCCTTTAAAAAAAAAAAATCCTTCCTAANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCTCCCCAA AACCATGGCTCCTCTTCTCTTCCAAACCTACCAGCCTCTGGCATGATTATGGTCAAGCTG |
mm4_intergenic_5730507C01Rik|Gm3944_chr12_18570038 |
AACTTCCATGGGAGCAGGTGGCCATGTGATAGGGGAGTTTGGAGTTTAAGGACATTTTGTACCTCAGCTGCTCTTCTCAA CCACAACTAGGACCCATGTGACATATGTGTGAGCCCACAAGTCACACAA |
mm4_intron_Gm26861_chr13_10614433 |
AGGAGGGAATGGTAGACGGACAATAATTAATGATTAGCATTGGCTAATAAGAGAATCTAGGGGAGACCCTCACAAAGGGT ATCAACGATATCCTAATGCTGTTCCCTAAGCTCAGTG |
mm4_intergenic_AC154801.1|BC040587_chr16_40708803 |
CCCTGACGTTTGGTGTCTCACAAAATCATGTGTATTCATGTTGGCTGAGTGGAGGAACTCAGGAGACAGGCACATCTGCT TTTGACTAAGCCTTTCTTAATGCTCATGGAGAC |
mm4_intergenic_Gm5633|Gm22908_chr12_21823583 |
TAGCTCACATCACACCGGTCCTAGTTGTGGGTGAGAAGAGCAGCTGAGGTACAAAATGTCCTTAAACTCCAAACTCCCCT ATCACATGGCCACTTACTCCTGTGGAAGTTGCTCCAGGCCTCTT |
mm4_intergenic_Gm3993|Gm10479_chr12_20380336 |
AAGAGGCCTGGAGCAACTTCCATGGGAGCAGGTGGCTATGTGATAGGGGAGTTTGGAGTTTAAGGACATTTTGTACCTCA GCTGCTCTTCTCACCCACAACTAGGACCGGTGTGATGTGAGCTA |
mm4_intergenic_Gm21863|Gm3993_chr12_20013318 |
AACTTCCAAGGGAGCAGGTGGCTATGTGATAGGGGAGTTTGGAGTTTAAGGACATTTTGTACCTCAGCTGCTCTTCTCAC CCACAACTAGGACCCATGTGACATATGTGTGAGCCCACAAGTCACACAACA |
mm4_intergenic_Gm20474|Gm10330_chr12_23706154 |
TTGTGTGACTTGTGGGCTCACACATAGGTCACACGTGTCCTAGTTGTGGGTGAGAAGAGCAGCTGAGGTACAAAATGTCC TTAAACTCCAAACTCCCCAATCACATGTCCACCTGCTCC |
mm4_intergenic_Gm10476|Gm17391_chr12_22531111 |
TTGTGTGACTTGTGGGCTCACACATAGGTCACACGTGTCCTAGTTGTGGGTGAGAAGAGCAGCTGAGGTACAAAATGTCC TTAAACTCCAAACTCCCCTATCACATGGCCAC |
mm4_intergenic_Gm10330|Gm17330_chr12_23874828 |
TTGTGTGACTTGTGGGCTCACACATAGGTCACACGTGTCCTAGTTGTGGGTGAGAAGAGCAGCTGAGGTACAAAATGTCC TTAAACTCCAAACTCCCCAATCACATGTCCACCTGCTCC |
mm4_intergenic_2410018L13Rik|Gm26140_chr12_23085391 |
AGGTCACACGTGTCCTAGTTGTGGGTGAGAAGAGCAGCTGAGGTACAAAATGTCCTTAAACTCCAAACTCCCCTATCACA TGGCCAC |
mm4_intergenic_Gja5|Gm24435_chr3_97111439 |
CCACCCAGACTGCATTCTGTGCAGTCTGTTCTCTGGTGTTTAGTGAAGGACAGTCAAGACTATGACACCTGTCGTAACCT TGGCTCCTTTTCTCAGTAAACAAATGCTTGAACAACAGCTGTGTGCCT |
mm4_intergenic_Krt13|Krt15_chr11_100122018 |
GGCTGGATGGAATGTTCTGGAAACCCCTTAGCTCTTCATCTATGCCAATGCTCCCAACAATTCTGATCACAAATTTTGTT GATCATAAAGAATTAGCCTCATTGGACACCTTGAGCCTGAA |
mm4_intergenic_Tlr2|D930015E06Rik_chr3_83883699 |
AATGGGGTTGGAAGTTGGCAGATTGTCCCTCAGCTCCTCATTTCAGCTAACACAAGAAACTAGGCTAAGGTTGATAGTGG GGTAAGGAACGTATTCTACCCCTAAAGAAGTACAGTTCTTCACAGGAGGGAGAGTGGAC |
mm4_intergenic_Gm5449|Drd1a_chr13_53590279 |
ACTCCATAGCAAGGTTGGGGGACATTGCTCTTGGCTAGGAAGAGGAGAAATGGGGCAGCTTTGTTCTGTGTACAGAGTCT TCAGACTATGACGAGAGTGGTAGACCATCCAGAGGTGTTAGCAAAGGGATGCAGGGTG |
mm4_intron_Gabrg3_chr7_56767259 |
GAGGTAGCCACAAACAGCCTTTACTAAGTTGTATACAACTTAGGCTTGTGTATTCCATATATGCTGCCACCCTTAGATCC TTTTCTCATCCTATACCCAGGTTACACTTTCAACA |
mm4_intergenic_Gm11997|Vwc2_chr11_10386935 |
TCAACCAGAATAGAGCCTAAAAGTACTTAGGAAATGTATTATGCAACATAGGATTGCCTGGGAAGTGGAACTATGGGGAC CTGAATGCCTATTGAGA |
mm4_intergenic_Gm26173|Tbc1d4_chr14_101311959 |
GACCCACACACCCACTTCTCATGGGTTATCTCCCACAACTGGTCAGGCAAACTCTACCTTTGCTCCTCTACCCATCCAAA CCCCCTGCTGCCATCTGCACTGCCCCTCACTCCAGCCAATTGT |
mm3_intron_Wnt3a_chr11_59287204 |
GGGCTGCAGAGAAGAGTGAGAAGCCAGAGGCACCCATGTGCTGAGAAGAGGAACTAGAGTTGGTCTCTAAAGAAATGGGA CTCGTTAAAGTGTCCCTGGGACACACACAGCACA |
mm4_intergenic_Golga5|Chga_chr12_102525057 |
AGCAGAGCCTATCCTTTGGGTTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNCCTCTCCTTCCTGGCCGGGCTAGGAGAGAGTTGGTTTGGGGCA |
mm4_intron_Dpp6_chr5_27210193 |
ACACACTGTGTTCAAAGGATTCATTTAAATACAGACATATGGGTAGAATAGAAAGATTAGGGATGGGAAGTTATAAGCAT ATTGACTGTGAAAAGCAGCTACGGCTGTATGAGTACCAGGCACTGTGGAC |
mm3_intron_Gria1_chr11_57268218 |
CTTAGAGCTCCTCGTCCCCTCCTCTAGCTCCTCTTCTCATCTCAGGTCTGATCTGAATGAACCTAAATCTCAGTTCCCTG TATGAGGGGAAACATTTGTGTCTCTGGATGTGCTGG |
mm4_intergenic_Gm5976|Tmem194b_chr1_52581927 |
CTGTGGCTGGTGAGGGTAAGCAACAGTCGAGGAAGTTCTCTAACAGAATGAAGGTGGCTGAGAGGAGGGGCTGGGGGTGG CTGAGGAGAGTGGGTTTG |
mm4_intron_Gbf1_chr19_46260397 |
TGCTGACCAGAAAACCTACAGTATGACTGTGAAGAGGAGCTCAGGAGATTTATCATTGTCATTATAGGCAGCATCTGAAA AAAAAGGGAGGTGGCGACTTTTGCAGGATG |
mm4_intergenic_Gm14243|Gm5270_chr2_161244091 |
GGCTAACCTGAGGCTGACAGCCTTAGCTCATCTTCCCAGGCCAGGCTGTGGTTCTGTCTGTCTTAGGTGAGCTGTTATCC CTGTACTTTGAAGGCTGACTTCATGGGAGC |
mm3_intron_Prkag2_chr5_25038886 |
GCCCATCAGCTGGTAGAACAACGAAGCCCTGGCTTCTCTGCTCAGCCAACCTTGAAGACATCTAGGGTTCCTAGAGCTTA CCCTGTGCACAGTGTGAGTTCTAAACCCTACCTGAGGCCTCAGGTTGTCTGTC |
mm4_intergenic_3100002H09Rik|RP23-230F2.8_chr4_124627493 |
AGACACAGATATAAATGCAGGCATATGGCTATAGATTGGGAGAGAAGGGGAGCGATGGCTGGCCTGCAATAACCACTCGA TATGCAGACACTTTTAGATTAGTCCATGGCACAGAGTGACCTCCAGAG |
mm4_intron_Lef1_chr3_131118303 |
GAGATTCCAGCTGTGGCCAAGTGGCACACACAGGGAGTCCTCTTCTGAAGTCTCCCCAGAACCATCTGCCCTTGCTCCTG TTTTCAGCCAGGTCAGACATCATGGTACCTACTCAGGAGAACTGCCTTTGCC |
mm4_intron_Fam53b_chr7_132799723 |
GTTCCTGACACAGCTCAGCTAAAGAGGCCAAAGGGCCTGGGGAGCTCTGGGCTGAGAGGAGGGGCTGGGGTTACAGTCTG AAGAATAGCAGGGCTATGGACTGCTTACAGGGTAGAGGTCAGAGGGTGGTTAGTGC |
mm4_intergenic_Sema6a|Gm5506_chr18_47713419 |
TGGAAGTTACAAAGGAATGGGGATGGGCTGAGAGGAGGGGCTGAGGTTGGTGCAGCAGTAGACTATGAAGGGACTGGGTA TGAGCCACATGCGGTGTCATGGGGTCCCTGATAGAAATGGGGTCAGGGGTGAG |
mm4_intergenic_Nell1|Ano5_chr7_51390745 |
ATATCTTGGTGGTTAGCTCCTTTCCCTAGTTCCTCTTCTCATAGAATTCAGGCAATGCCACTTGGAAGTATCACAGTGGG AGC |
mm4_intergenic_Gm11680|BC006965_chr11_112253032 |
GACCCAGAGGAACAAAGGCAACTCCATATCCATCCTGATTTCTTGAATACCATAACTCATCTTCTCATCTAAACATGCTT TGGAACTGGCCAGTGATGTAGTGATGTTGGGCACTCAGACTAGGGA |
mm4_intergenic_Atg5|Prdm1_chr10_44367291 |
TTCAGCCTCCCTTTGAGCAGCTCCTCAGCTGCTATTCTCAGCCAGCATCTGGAGGTCTTCACCAGTCCTGACCTTTTCAT AGACGAGTGGTGTGTGCCGAGCTTGTGCTGGAGGCGTTGCGTCTGAAAAG |
mm4_intergenic_Ano6|D030018L15Rik_chr15_96044457 |
GAGCAATGGAGGTGGAACCAGGGAGAAGGCTTTCTCACGCTGGCTGGGAAGAGTAGCTGGGGAGACTGGGAATGGGTGTA TTAACTGTGT |
mm4_intergenic_Unc13c|n-R5s86_chr9_73969693 |
GGCTGAGAATTGAATGGGGCTTGCTTTTCCTTTTAGCTTAGCTGAGTAGAGGAGGTGGGGGGAGTAACCACTCCTACTTT CCATCAATTAAGCATTTTTTAATCCTCTAACCCTCCTGTTGAAACA |
mm4_intron_Cgnl1_chr9_71759494 |
CTAGCCAGGGTCTTCCTTGCCTCTCCTGAGCTCCTCTCCTCACCCCACTAATCCCCAACCCGGTTGCTCAGGTACAGCAG A |
mm4_intergenic_Adra1b|Gm12153_chr11_43930079 |
ACTCCCTTCTGTTTCCAGGGATGAGGAAATCCTTTTGGTTTGATTAGATGAGAAGAGGGGCTGAGGACCTTTCTCTTCAG TAGCCCAATCCCAGGA |
mm4_intergenic_Gm24503|Ccrn4l_chr3_50942322 |
GGATCAGAACCAGCAGAGCATGTTATATGTGGTATGCACAATATATCACGCTTTCTCATTCGTGATAGGAGGCTGAGAAG AGCAGCCATGGCCACGTACAAACTCCAGAGGCTGAGAATCCAGCTGCTACTCCATCCA |
mm3_intron_Stard8_chrX_99052739 |
CGAGCCTCAGGTAGGATGCTTGCTTCAGAAGAGGAGCTAGAGCCAGATGTGCATACACTGTTAAGTTGGGAAGCAGAGCT TCCTGTCCAGGCATTGCCAGAACATTCAGTATCCCTTAGCACACTGCATTGAGAGCACCA |
mm3_exon_Cacna1b_chr2_24605737 |
TCATCCACGATGCTCAGAGCCAGAGATCAGGCACTTGGTTGAGCAGAGGAGCCAGGGTCATTGGGGACATCCCAGGCAGG GTAGAAACATACA |
mm4_exon_9130213A22Rik/Hes7_chr11_69121092 |
TTGAGTCGTTGGTTCCGGAGGTGCGAGGCCAGGTGAGAGATATTAGGAGAACGAGTGAAGGGTTTGAGTGAGAAGAGGAG GTGTGGTCGCACTGTGTGTCTGCCTTTCACCTTAGGTCTCTATCGCGCG |
mm4_intergenic_Gm12159|Gm12160_chr11_45138607 |
TAAAGTGATGGGGAGCTGGCCTGGTTCACATTAGGACTTTGAAAGGTGGGCAGAGAAGTGGATCTAAGGGTAATATTGGC AGAACCTTATAAATGACCTGATTGTTATTTTATATGGGCGACAACCTCCACATTA |
mm4_intergenic_Gm13044|Gm13041_chr4_143496426 |
GGGTGGAGACTTCATCATTCCATCAGGTGGAGAGGTGTGGCTGAAAAGGGGAGGTATGGGAAGGGGGGAAGGAGTATATA AGGACTCAGATGTCTGCACAAGACACTCTGAGCCT |
mm4_intron_Map4k3_chr17_80597739 |
GAGTGGACACGGCATAGGAAACTCTATGTGCTGGAGAGAGACAGATAGGCTGAGCAGAGGGACTAAGGCCACACTGCCCA AGGGGAGCAGCAGTGAGGCCTGAGCCGCCCCAGAGGCAGGAGAGGCTTCTGCTCTCA |
mm4_intron_Tmem182_chr1_40846922 |
AGCAACCATCAAGAGCTCTGATTAAAGGTCAGGGTTAGTGTAGAATTTAGGTTGTATTCTGTTGCTTTTCAAGAACTGTG TCTTCAGTTGGGCTGAGCAGGGCAGCTAAGGTGTTGGGGTTGGTTATTCAGCTCCTGCCA |
mm4_intergenic_Plb1|Gm5864_chr5_32403617 |
AGGGGAATGAGAGCTAAAGGGGTGGGTGAGAGGAGGAGGTAAGGAAGGAAAGCTGGAGAAAAGCAAACAAACCTGCTTAG GGAGAGTTAAGCTTTCTCCAATACATCAGTTGTCAGGGGCTGG |
mm4_intergenic_Slc7a1|Ubl3_chr5_148424343 |
TTCAGCAATCTGTAAACTCATGGCCTTTTCTCCATTTCTCAGCCAATACCATCCACACCACTATTGCTGGTGGTGGTGGT C |
mm4_intron_Clstn2_chr9_97738135 |
CCCCTTCACCCCTTCAACATATATACAGGTAACANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTTTGT TTCATGCCATCCAGTCCCATGTCTCCTCCTCACAGCCAACCTCTATGATGTGTGTCAGCA |
mm4_intron_Siae_chr9_37622123 |
GAGGTTGACAGCAGTGATCCAGTGGCTGAGAAGAAGGGCAATGGGAGGTGTGGTTTCTAGGAAGCAAGCTATGAATGTCT AAAATAGGGTCTTTCATGGCTTCTCATTTCTTAGTGGTGTCGCAGAACCTCAAG |
mm4_intergenic_Gm7745|Lrfn5_chr12_61474652 |
TGGTCTCCTACATCTTCTGGGATGGAGAAAATATAAAATTATTGACTGAGAAGAGCAGAAAAGGCTTGGATCACCACATA TGGTAAGACGGCGGCT |
mm4_intergenic_Wipf2|Cdc6_chr11_98907461 |
TTCATGCCATACAGGACCGCCCCCCAAAAAGTAGGCCTTGTAGCCCTCTTAAAATCTAGCCCACCAGAATAATGAAAATA GGGATGTTTGGCAGATAAGATGAGCAAAGGTAGCCCAGTAGAATGAGGACGT |
mm4_intron_Gm12153_chr11_44099159 |
GCCGTCAAGAAGCCTTTGTCTATCTCTGAGATCTCTGTCATCTTGTCTGAGAGGATGAGATAGGGCAGGAGGTGATGTGT GTTATAGGACTGATCACCAATGCCCTGAATGGCAAGGCAGAGCCCATACCTGTTCTCCCA |
mm4_intron_Ggct_chr6_54990674 |
TGTCATTCCGTCCGCTTCAATGGCTCAATGCTCGTGTGTAACGTAGGTAGCTACCAGTCCAGATCAGCTCTTTCTTCTGA TTTAGGGTTGACCTGATCTCCTCATCTCTGCCAATCCCACCTCTACTCCCCATT |
mm4_intron_Anxa1_chr19_20387334 |
CAAAGCACTGTTCAGGTGGCACAGGGGGAATGGGAGGTGGATCCATAGCTACACTTCTCTGCCTACTTACCACCTAGATT TTTCATGGAGACAAACTTAATTAAATGGAAGACTTTGTTTCTTTCCTCC |
mm4_intron_Nuak2_chr1_132329646 |
TTTACCCATGCAGGTCCACCCTGGCTTCCTGCCTAGGAGTGGGCAGAGATGAACCCTTGGCTCAGAAGGGCAGCTCAGGC TTCATGTAGTTACTGGGCCTTGCTTGCCTACTGAGGGCTTT |
mm3_intron_Akap6_chr12_52853474 |
GCTTTGAACCTCAGTGTAGCCTTCTTTCCCAGAAATTCTGTAGCACTCTAGAGCTCCTCTACTCAGCAAACCTTTATTAT CACCCACGAAGGACACAGTGCCACTTTAAAGCAGCCC |
mm4_intron_Alk_chr17_71916765 |
CTTGATTGGCAGCGTAGACGGTTATCGAATTCCTGCCCTGTAGCTCCTCTTCCCAGAGACTGTGAGGGTCTGCAGTCAGT C |
mm4_intron_Sgcd_chr11_47593388 |
GGAATCCTCAGAATCCTGTGAATTACATAATTACATGACCTAGCTATTATTTCCCCTTCGATCCTCTTCCCAGGCAAATG CAGAGTGAAATTGGTCACTTATCATAAAGTTTCCCAAACACATGCAAGTCT |
mm4_intergenic_Snx6|Cfl2_chr12_54852690 | GGTCATCATTCCCTCCCTGCCCTCACCTCCTCTTTTCAGACAAGGTCTTGCTGTTTAGCCCAGGCAGTA |
mm4_intergenic_Auts2|Gm25722_chr5_132709617 |
AGAAGCCCTGTCCTACACCTATATCTCAATGGCTGAGATGATGAGCAAGGGGCGGGGGTGGGGGTGGGGGGCAGGGACGA CTGTGAAGCTA |
mm4_intergenic_Gm16542|Fhit_chr14_10814198 |
CCACACATAAGAGACTCAGGCATTCAAATATTCCTGATTTTGCATCTTCTTACTTTCTAATGTGACTTTAATTATTGCCA CACACCTTTGCTCATATTCTCAGCTAAGAAATCACAGCCTTTGCATTCTCT |
mm4_exon_Smg7_chr1_152846122 |
GGAACACTGCCCCAAGGTTACAAAGTACCCAGTGAGTGAACAGAAAGCCCTGCACCAAGGCCTCAGACAGAAGAATGTGT ATTTACCTGGTCGGCTGGGAAGAGGAGGGAAGGCTCCAGGGTGATGGATGGGGATGA |
mm4_intergenic_Stxbp5l|Gtf2e1_chr16_37504032 |
TCTAGCAGCTTCCCTCAGGAAAGAAACCAAGAACCCCACCCCAACCTCCTCGTCTCACCCAAAAGGGAAAATCAGAAGCA AAGTCTATTATGGTTTCCAAGAATACCGAGTCAACACACAAAACTG |
mm4_intron_Glis3_chr19_28287516 |
GGGGAGCTGGAATGACCTTATAATGAGCAATGGTTTGCTAAGAAGAGGAGGCAAGGGGGAAGCTTTGAACCCTAGTAAGT GATCCTTTTTGCAGAAGAGGGACTTCAAAGGTTCTTGTAAATGCTCATTCATGCACACCT |
mm4_intron_Spns2_chr11_72476547 |
ACACCTCCTCTCTGTCCTGGCCCAAGGCTTACTCACTATAGTGATCCCTGCCACCCCTGCAAGACTGGCGTCCATGCCTC CTCTTCTAAGCCGACTTCCCTGATTTCTCTTCCTCCTGCCACCCTCAGTCCATCAAG |
mm4_intergenic_P2ry4|Arr3_chrX_100600280 |
CCAGTGGGGTCATAGAAAACAGACATGAAAATATAAAGAGGATTAGTTGAGAAGAGGAGGCAAGGGAACAAGAAAGAGTA ATGAGTGTGAACACGGTCAAAATGCA |
mm2_exon_Txndc15_chr13_55726131 |
AGTGTCGTCAAACAGGAAAGTGTTGTCTCAGAAGAGGAGCTAAGATGGGAAGTATGGGCTAGGACGGGAAGTGCAGGTCT AC |
mm4_intergenic_Gm14108|Gm24221_chr2_148124663 |
TGCTCATGCACTTCCCTTAAGCCATGGCTCATCTTCTCAGGGAAACATCCCAGCACATCCTTTAATTAATTCTGCCATAC CCTCTCTCTCCAGCTCTG |
mm4_intron_Gda_chr19_21458917 |
GCCTTATTCCCTCCAGCTCCATTCTAGCCTTTCTGCTTCTTTCTGCTTCAGTAAAAGTTCCTAGCTCCTCTCCCCACCCC ACCCCTGTGTCTTTCTTTCCATGTGCC |
mm4_intergenic_Pigk|St6galnac5_chr3_152797767 |
GCCAAAGAAGTATGCTGCAAACCTAATAAAGGTGAAGGCTGCGGAGAGGAGCTAAGATCAAATCAGAAGAAATCGAAAGG AATCAAAATAGCAATTTCAACAGGTTGAGAGCAAAAACAAACCTCAGAAATGAAAGAGCC |
mm4_intergenic_Gm25437|Gm22684_chr19_20010465 |
GCTCTGTGGGGTTGATTGGATCTGACAAGTGTTGTAGCTACTCACCGTAATGGATGTCTCTGCTTTCGCAGAGAAGAGGA GGAAAGGATGTAATTCCCAGTGAAAGAAAGCAACACGA |
mm4_intergenic_Gm12080|Gm6685_chr11_28290907 |
ATTTCACTCCTCCCTGTGCCCACTCTTGGCTGATAACTGTAGCTAGGGAGAAAATGGCAGTTTGTGTTTTCTAGGAAGGG CACTGTGAGG |
mm4_intergenic_Wdr61|Crabp1_chr9_54764624 |
CACCAGGGGAGAGCAAGTTCCAAGTTGCATCACTAGTGGCTGAGAAGATGAGGAATGGTGAGGGGCGCCTTAGGGCGGGG AGTCG |
mm3_intron_Bnc2_chr4_84337376 |
GAGGTCAGGAAACATGGCCTAACCATTTCATAGCTCCTCATCTCAGCAAGGTTATGCTAGACTTAAAAGTGCCCTATTCT ACCCTAGGAAGATACAAAGAAACACCTCAAGACAGGTCCCAACGCTAACA |
mm4_intron_Gm20757_chr10_92232364 |
CAGCCCAAGGTCCACTGTAGACACTAGAGGATCAGAGTTGGCTGAGAAGAGAATGGAGGGGGCAAAAGACAGAGTTTTGA TTAGTCCTATACTCTGTGGTGTTGTCTGTGT |
mm4_exon_Cyp2a5_chr7_26840917 |
CAATGTTCCCTGGCCTCCATCCTGTCTTAGTTTCTCCACTATGAAGTTCTTGGATACCTAAACCCATCCCTGTTCTTCTC AGCCAAGGTCCATGAGGAGATTGATCGGGTGATTGGCAGGAA |
mm4_intergenic_Dusp1|Gm8225_chr17_26514918 |
CTCACTGACCACACTGGACAGATGACTCATTTGCTAGCCTTGACATCAATGGGTTTTGCCACCCATGGAGAGTGAAGTCA CACCTCCAGTGCCCTGATATACTCTTCTCAGCCAACTCCAGGGCAGACAAGGAAC |
mm4_exon_Cyp2a4_chr7_26312747 |
CAATGTTCCCTGGCCTCCATCCTGTCTTAGTTTCTCCACTATGAAGTTCTTGGATACCTAAACCCATCCCTATTCTTCTC AGCCAAGGTCCATGAGGAGATTGATCGGGTGATTGGCAGGAA |
mm4_intron_Col6a6_chr9_105736097 |
TCCAAGTGACTTGTGTGGGGGGCTCATTCTATCCACATAAGCACAAAGAGGGAATCGTTAACCTTGGCTGAGAAGCTGAG GCAAGGAGGTCTAGGGAGGATCTTCTGGCTCT |
mm4_intron_Ptprg_chr14_11606583 |
TCAGTTCCTGATTGGGAAAGCAAATCTCTCACAGTTGGTGGAGATGAGGTGCTAGGGGGATGTAGGGAAGTGATTGGAAA GGATCAGCTAAAGAAGACAAAAGGTGGTTGCTGTTGGTGGAAGCTTGGGA |
mm4_intron_Acat1_chr9_53587806 |
CACACGGTGGCACTGAGTTAATGTTTCTCCTCAGCACCTCTGCACAGCCAAACTAGAGCACACTCAATGTATTCTTCAAA CCTATGTCAGAACCACATACTCTCTACAGTCACTCGAAGCTGAATGT |
mm4_intron_Abcd2_chr15_91168443 |
GGGAAGGGCTCAGAGTTGATGACATCATCACATATACTTACAGTTCTCTATGCTACACAGCACGGAGCCATGGCTGTGAT GAGGCGCTATGGAGAGGTGGTTCTGGGCTATATCCCCACGCTCAT |
mm4_intergenic_Rbpsuh-rs3|Cntnap2_chr6_46545739 |
AATCAGAGGGTGAAGGGGCAGGGGGGACTAGCTGTAGGCTGAGAATGGGTGCTAGGGAAAGGATGGGGACAGGATCAATT GCTAAAATGTACAAAGACTGCAACCTCATGAAAACTATTTGAAGGACTCTATGCCCCTGC |
mm4_intergenic_Gm8183|Tmem135_chr7_89046675 |
AGAGCAGGGATGGGAGGAATTAATTGGAAGGAGGTGATGAGGAAGAGGGATGAGAGGAGTTGGCTGGGAGGAGGTGATAG GGAGGAGGGATGGGAGGAGTTAGATGAGCTGTGAAGCCAAAAGAGCA |
mm4_intergenic_Gm23662|Arntl_chr7_113140462 |
GCTCCACTCATGGCTCTCTCAGGCCTTAGCACCACTTCTCACTCAACAGACACAGCACCTCCATCATTCCTGGAAGGCGT GGAGACTGAAGACCAA |
mm4_intergenic_Gm17540|Gm21915_chr9_40555769 |
GGCCCCTTATCCTAAAGACTCCAAATCTTACCCTTATGCTCCAATCCGTGGCACATCTTCTCAGCCCAAGATGTTATCTT TGGGTCTTTTCTCCATGTCATTCCCAGCATCAGGAAGTCCT |
mm4_intergenic_Gm13508|Gm25215_chr2_49369812 |
CTTTGGCACTCAGAGGGGAATCAAAGGTCAGATCTTTCAGTGTTTTGTAAGAGACTACACTTGGGAGATAAGAGGTGCTA AGGATGGGAGATTTTAAAGAAATTGGTCATAGTGGTAAGCTACAAACCCTCA |
mm4_intergenic_Aadac|Sucnr1_chr3_60072144 |
GTAAGGAGGACTGGTGCTACCAGCACTGTGGCTGAGAAGACGCTCTATGGATGTCAGAAGTGCTGTCTCCATCAAGTTTC TCCTCAGTGGAGACTGGCTGACACTC |
mm4_intergenic_4930452L02Rik|Tekt3_chr11_63018631 | CCTCCTACCCACTGACCCTTGCCCCTGACGGCTCTTCTCAGCCAAGCCTAGCAAGCACACAGAGCATCT |