← return to the list of all guides
Contents:In the table below, Illumina Nextera Handle sequences have been added and highlighted in bold. Primers for the on-target have been added for convenience. The table below is sorted by the CFD off-target score. Sites with very low CFD scores < 0.02 are unlikely to be cleaved, see our study Haeussler et al. 2016, Figure 2.
In the protocol by Matthew Canver, Harvard, two PCRs are run: one PCR to amplify the potential off-target, then a second PCR to extend the handles with Illumina barcodes. Please click here to download the protocol. Alternatively, you can have a look at Fu et al, 2014.
If a primer was not found, the reason is usually that the region around the off-target is too repetitive. To avoid unspecific primers, all repeats are masked for the primer design (not for off-target search). If you think that we should change the parameters here or should use different primer3 settings, please let us know.
| Name | Primer Sequence | Tm | CFD Score |
|---|---|---|---|
| ontarget_mm0_exon_5730457N03Rik/Evx1_chr6_52313620_F | TCGTCGGCAGCGTCTTGCAGCAGGAGGATGACAG | 60.0 | 1.00 |
| ontarget_mm0_exon_5730457N03Rik/Evx1_chr6_52313620_R | GTCTCGTGGGCTCGGAGATGGCAGTGGGGAGCTA | 59.9 | 1.00 |
| mm4_intron_Wdfy3_chr5_102055251_F | Primer3: not found at this Tm | N.d. | 0.78 |
| mm4_intron_Wdfy3_chr5_102055251_R | Primer3: not found at this Tm | N.d. | 0.78 |
| mm4_intron_Atp2b4_chr1_133771957_F | TCGTCGGCAGCGTCATCCTGTCCCGGTTAGCTCA | 60.3 | 0.76 |
| mm4_intron_Atp2b4_chr1_133771957_R | GTCTCGTGGGCTCGGACACAGGCATCACGTCACAT | 59.9 | 0.76 |
| mm4_intergenic_Olfr695|Olfr697_chr7_106731243_F | Primer3: not found at this Tm | N.d. | 0.67 |
| mm4_intergenic_Olfr695|Olfr697_chr7_106731243_R | Primer3: not found at this Tm | N.d. | 0.67 |
| mm4_intergenic_Terf2|C630050I24Rik_chr8_107118266_F | TCGTCGGCAGCGTCAGTGACTCTGCAAAGGAGCC | 59.9 | 0.64 |
| mm4_intergenic_Terf2|C630050I24Rik_chr8_107118266_R | GTCTCGTGGGCTCGGGGTGGGTGTACACGTATCCC | 59.8 | 0.64 |
| mm2_exon_Sh2b3_chr5_121836071_F | TCGTCGGCAGCGTCTATTCACCCCTCCTGGCTCA | 59.9 | 0.63 |
| mm2_exon_Sh2b3_chr5_121836071_R | GTCTCGTGGGCTCGGTCTGAACCTTGTTCCCCAGG | 59.2 | 0.63 |
| mm3_intron_Elovl1_chr4_118429291_F | TCGTCGGCAGCGTCCCAACTTTGAGGAGGAGGGG | 59.6 | 0.59 |
| mm3_intron_Elovl1_chr4_118429291_R | GTCTCGTGGGCTCGGGCATCACCCTTCCCTACCAG | 59.8 | 0.59 |
| mm3_intergenic_5031439G07Rik|Upk3a_chr15_84996341_F | TCGTCGGCAGCGTCTCACAATCAACAGGCACCCT | 59.5 | 0.58 |
| mm3_intergenic_5031439G07Rik|Upk3a_chr15_84996341_R | GTCTCGTGGGCTCGGTTGTCCAGGCAGACCTCCT | 60.1 | 0.58 |
| mm4_intron_Nfic_chr10_81424584_F | TCGTCGGCAGCGTCCTGCCTTGGGACACTTCTCA | 59.6 | 0.56 |
| mm4_intron_Nfic_chr10_81424584_R | GTCTCGTGGGCTCGGCTCCTCATAGCTTTGCGGCT | 60.1 | 0.56 |
| mm4_intergenic_Mapk8|Ptpn20_chr14_33495309_F | Primer3: not found at this Tm | N.d. | 0.56 |
| mm4_intergenic_Mapk8|Ptpn20_chr14_33495309_R | Primer3: not found at this Tm | N.d. | 0.56 |
| mm4_intron_Hydin_chr8_110361251_F | TCGTCGGCAGCGTCGACAAATGTCTGGGCGGAGA | 60.0 | 0.53 |
| mm4_intron_Hydin_chr8_110361251_R | GTCTCGTGGGCTCGGTTTTGGGAGGGGAGGGGTG | 61.1 | 0.53 |
| mm2_intergenic_Fnip2|Gm3513_chr3_79530536_F | TCGTCGGCAGCGTCCCCCATAGCTCAGCAGTAGC | 59.9 | 0.53 |
| mm2_intergenic_Fnip2|Gm3513_chr3_79530536_R | GTCTCGTGGGCTCGGACGTGTGCTCTTACCTGCTC | 60.0 | 0.53 |
| mm4_intergenic_Gm23735|Fndc3a_chr14_72465504_F | TCGTCGGCAGCGTCTCTGCTTGGACTGTGTAGGT | 58.2 | 0.52 |
| mm4_intergenic_Gm23735|Fndc3a_chr14_72465504_R | GTCTCGTGGGCTCGGGTCACTGGAAGACGTGGGTT | 59.8 | 0.52 |
| mm3_intron_Hs6st3_chr14_119454579_F | Primer3: not found at this Tm | N.d. | 0.52 |
| mm3_intron_Hs6st3_chr14_119454579_R | Primer3: not found at this Tm | N.d. | 0.52 |
| mm4_intergenic_Ankfn1|Pctp_chr11_89676251_F | Primer3: not found at this Tm | N.d. | 0.49 |
| mm4_intergenic_Ankfn1|Pctp_chr11_89676251_R | Primer3: not found at this Tm | N.d. | 0.49 |
| mm3_intergenic_Als2cr12|Cflar_chr1_58707068_F | Primer3: not found at this Tm | N.d. | 0.49 |
| mm3_intergenic_Als2cr12|Cflar_chr1_58707068_R | Primer3: not found at this Tm | N.d. | 0.49 |
| mm4_intergenic_AC125320.1|Cdh18_chr15_22416128_F | Primer3: not found at this Tm | N.d. | 0.46 |
| mm4_intergenic_AC125320.1|Cdh18_chr15_22416128_R | Primer3: not found at this Tm | N.d. | 0.46 |
| mm4_intergenic_Gm23162|Runx1t1_chr4_13737609_F | Primer3: not found at this Tm | N.d. | 0.45 |
| mm4_intergenic_Gm23162|Runx1t1_chr4_13737609_R | Primer3: not found at this Tm | N.d. | 0.45 |
| mm4_exon_Utp18_chr11_93862003_F | TCGTCGGCAGCGTCCCCTGCCCTTTTCATTCCCT | 59.9 | 0.44 |
| mm4_exon_Utp18_chr11_93862003_R | GTCTCGTGGGCTCGGTCTCCTGCAGGTTCATCTTCC | 59.4 | 0.44 |
| mm4_intergenic_Mirlet7b|Ppara_chr15_85724462_F | TCGTCGGCAGCGTCGTCTGTCCTAGCTGGCCAAC | 60.3 | 0.43 |
| mm4_intergenic_Mirlet7b|Ppara_chr15_85724462_R | GTCTCGTGGGCTCGGGCTGAGAGACATGAAGGCCA | 59.7 | 0.43 |
| mm4_intron_Fhit_chr14_9841146_F | TCGTCGGCAGCGTCCTCAGCATCGACAAATGGCA | 58.9 | 0.43 |
| mm4_intron_Fhit_chr14_9841146_R | GTCTCGTGGGCTCGGTCAGGGTGAAGTATGGACAGC | 59.4 | 0.43 |
| mm3_intron_Zfp800_chr6_28270443_F | Primer3: not found at this Tm | N.d. | 0.42 |
| mm3_intron_Zfp800_chr6_28270443_R | Primer3: not found at this Tm | N.d. | 0.42 |
| mm4_intron_Tmc1_chr19_20894640_F | TCGTCGGCAGCGTCGAACTGTCCAGAGCAGCTGT | 59.9 | 0.42 |
| mm4_intron_Tmc1_chr19_20894640_R | GTCTCGTGGGCTCGGTCTCTGTAAATGGCAAGTGACCA | 59.9 | 0.42 |
| mm3_intron_Farp2_chr1_93614552_F | Primer3: not found at this Tm | N.d. | 0.40 |
| mm3_intron_Farp2_chr1_93614552_R | Primer3: not found at this Tm | N.d. | 0.40 |
| mm4_intergenic_Gm10220|Gm7361_chr5_26168278_F | Primer3: not found at this Tm | N.d. | 0.40 |
| mm4_intergenic_Gm10220|Gm7361_chr5_26168278_R | Primer3: not found at this Tm | N.d. | 0.40 |
| mm4_intergenic_Tbr1|Gm13555_chr2_61814573_F | TCGTCGGCAGCGTCCTTGGAGGTGACTGGCGAAT | 60.0 | 0.40 |
| mm4_intergenic_Tbr1|Gm13555_chr2_61814573_R | GTCTCGTGGGCTCGGGTCTTTCTCCACCTCACCCG | 60.0 | 0.40 |
| mm4_intron_Setbp1_chr18_78770428_F | Primer3: not found at this Tm | N.d. | 0.39 |
| mm4_intron_Setbp1_chr18_78770428_R | Primer3: not found at this Tm | N.d. | 0.39 |
| mm4_intergenic_Faim2|Gm5808_chr15_99554438_F | TCGTCGGCAGCGTCCCGCTCTGACCCATCTCATG | 60.2 | 0.36 |
| mm4_intergenic_Faim2|Gm5808_chr15_99554438_R | GTCTCGTGGGCTCGGAAACAAGAGCGTGTGTCTAATTT | 57.2 | 0.36 |
| mm4_intergenic_Gm6027|Gm4746_chrX_90266734_F | Primer3: not found at this Tm | N.d. | 0.31 |
| mm4_intergenic_Gm6027|Gm4746_chrX_90266734_R | Primer3: not found at this Tm | N.d. | 0.31 |
| mm4_intergenic_Gm5899|Gm23884_chr7_95147132_F | Primer3: not found at this Tm | N.d. | 0.30 |
| mm4_intergenic_Gm5899|Gm23884_chr7_95147132_R | Primer3: not found at this Tm | N.d. | 0.30 |
| mm4_intergenic_Gm22337|Gm25347_chr3_115417935_F | Primer3: not found at this Tm | N.d. | 0.29 |
| mm4_intergenic_Gm22337|Gm25347_chr3_115417935_R | Primer3: not found at this Tm | N.d. | 0.29 |
| mm4_intergenic_4921524L21Rik|Rab18_chr18_6651732_F | Primer3: not found at this Tm | N.d. | 0.28 |
| mm4_intergenic_4921524L21Rik|Rab18_chr18_6651732_R | Primer3: not found at this Tm | N.d. | 0.28 |
| mm3_intron_Fam196b_chr11_34408005_F | TCGTCGGCAGCGTCATATAGCACCCAGGGGCAGA | 60.1 | 0.27 |
| mm3_intron_Fam196b_chr11_34408005_R | GTCTCGTGGGCTCGGGCTTGGATGGAGATGGACCA | 59.4 | 0.27 |
| mm4_intergenic_Gm23176|Nt5e_chr9_88093262_F | TCGTCGGCAGCGTCCAAGCACATGGGCAGATTCC | 59.5 | 0.26 |
| mm4_intergenic_Gm23176|Nt5e_chr9_88093262_R | GTCTCGTGGGCTCGGGGCCTGTATTGCATGACAAGC | 60.2 | 0.26 |
| mm4_intron_Lmx1a_chr1_167776130_F | Primer3: not found at this Tm | N.d. | 0.25 |
| mm4_intron_Lmx1a_chr1_167776130_R | Primer3: not found at this Tm | N.d. | 0.25 |
| mm4_intron_Csmd2_chr4_128462076_F | TCGTCGGCAGCGTCGGGTACACACACAGTTGCCT | 60.1 | 0.24 |
| mm4_intron_Csmd2_chr4_128462076_R | GTCTCGTGGGCTCGGAGAACCAGGGAGGAGGTGG | 60.2 | 0.24 |
| mm4_exon_Tmem147_chr7_30728260_F | TCGTCGGCAGCGTCAGGGCTAGACTGCATACCAGA | 60.0 | 0.24 |
| mm4_exon_Tmem147_chr7_30728260_R | GTCTCGTGGGCTCGGGAGACTGCCTCCTTTTGCCT | 59.9 | 0.24 |
| mm4_intergenic_Gm11895|Gm24965_chr4_25909495_F | Primer3: not found at this Tm | N.d. | 0.23 |
| mm4_intergenic_Gm11895|Gm24965_chr4_25909495_R | Primer3: not found at this Tm | N.d. | 0.23 |
| mm3_intergenic_Setbp1|Gm25824_chr18_79123550_F | Primer3: not found at this Tm | N.d. | 0.23 |
| mm3_intergenic_Setbp1|Gm25824_chr18_79123550_R | Primer3: not found at this Tm | N.d. | 0.23 |
| mm3_intergenic_Jazf1|Gm25818_chr6_53341362_F | Primer3: not found at this Tm | N.d. | 0.21 |
| mm3_intergenic_Jazf1|Gm25818_chr6_53341362_R | Primer3: not found at this Tm | N.d. | 0.21 |
| mm4_intron_Gtdc1_chr2_44849383_F | Primer3: not found at this Tm | N.d. | 0.21 |
| mm4_intron_Gtdc1_chr2_44849383_R | Primer3: not found at this Tm | N.d. | 0.21 |
| mm4_intergenic_Tle3|Rplp1_chr9_61571165_F | Primer3: not found at this Tm | N.d. | 0.21 |
| mm4_intergenic_Tle3|Rplp1_chr9_61571165_R | Primer3: not found at this Tm | N.d. | 0.21 |
| mm4_intergenic_Cd44|Gm23731_chr2_102876060_F | Primer3: not found at this Tm | N.d. | 0.20 |
| mm4_intergenic_Cd44|Gm23731_chr2_102876060_R | Primer3: not found at this Tm | N.d. | 0.20 |
| mm4_intergenic_A430078I02Rik|Pcbp1_chr6_86495381_F | TCGTCGGCAGCGTCAAGACACACACACATGCCCT | 59.8 | 0.20 |
| mm4_intergenic_A430078I02Rik|Pcbp1_chr6_86495381_R | GTCTCGTGGGCTCGGGTGTGTGAGGGGCTCCTTAC | 60.0 | 0.20 |
| mm2_intergenic_Zbed6/Zc3h11a|Lax1_chr1_133664754_F | Primer3: not found at this Tm | N.d. | 0.18 |
| mm2_intergenic_Zbed6/Zc3h11a|Lax1_chr1_133664754_R | Primer3: not found at this Tm | N.d. | 0.18 |
| mm4_intergenic_Rbfox1|Gm23476_chr16_8020670_F | Primer3: not found at this Tm | N.d. | 0.18 |
| mm4_intergenic_Rbfox1|Gm23476_chr16_8020670_R | Primer3: not found at this Tm | N.d. | 0.18 |
| mm4_intergenic_Lipg|Rpl17_chr18_74978834_F | TCGTCGGCAGCGTCTCCGTTCTTCGTTTAGCTGGA | 59.3 | 0.18 |
| mm4_intergenic_Lipg|Rpl17_chr18_74978834_R | GTCTCGTGGGCTCGGTGACAGTTGCAGTCGAGACC | 59.9 | 0.18 |
| mm3_intergenic_Gm14659|Gm14657_chrX_63263466_F | Primer3: not found at this Tm | N.d. | 0.18 |
| mm3_intergenic_Gm14659|Gm14657_chrX_63263466_R | Primer3: not found at this Tm | N.d. | 0.18 |
| mm2_intergenic_Gm15606|Opcml_chr9_28366732_F | TCGTCGGCAGCGTCAGAAAACCAAAGACCTCAGGT | 57.0 | 0.18 |
| mm2_intergenic_Gm15606|Opcml_chr9_28366732_R | GTCTCGTGGGCTCGGCAGCTTCCACCTTTGCAACC | 59.9 | 0.18 |
| mm4_exon_Lrrfip1_chr1_91101233_F | TCGTCGGCAGCGTCCCGTAACATGCCTAGCCTGT | 59.8 | 0.18 |
| mm4_exon_Lrrfip1_chr1_91101233_R | GTCTCGTGGGCTCGGATGCTTCGGTGTCCATGGAG | 60.1 | 0.18 |
| mm4_intergenic_5S_rRNA|Gcnt4_chr13_96912199_F | Primer3: not found at this Tm | N.d. | 0.18 |
| mm4_intergenic_5S_rRNA|Gcnt4_chr13_96912199_R | Primer3: not found at this Tm | N.d. | 0.18 |
| mm4_intergenic_Gm14653|4930515L19Rik_chrX_46236526_F | Primer3: not found at this Tm | N.d. | 0.17 |
| mm4_intergenic_Gm14653|4930515L19Rik_chrX_46236526_R | Primer3: not found at this Tm | N.d. | 0.17 |
| mm2_intron_Ptprf_chr4_118245709_F | TCGTCGGCAGCGTCGACAGACCCTACCAGGCTCT | 60.3 | 0.17 |
| mm2_intron_Ptprf_chr4_118245709_R | GTCTCGTGGGCTCGGGTGCTCCTCACACTGGTGTT | 60.1 | 0.17 |
| mm4_intergenic_Papss1|Gm26103_chr3_131771033_F | Primer3: not found at this Tm | N.d. | 0.17 |
| mm4_intergenic_Papss1|Gm26103_chr3_131771033_R | Primer3: not found at this Tm | N.d. | 0.17 |
| mm4_intergenic_Gpd1l|Osbpl10_chr9_114940886_F | Primer3: not found at this Tm | N.d. | 0.17 |
| mm4_intergenic_Gpd1l|Osbpl10_chr9_114940886_R | Primer3: not found at this Tm | N.d. | 0.17 |
| mm4_intergenic_Zc3h12c|Gm25562_chr9_52286042_F | Primer3: not found at this Tm | N.d. | 0.16 |
| mm4_intergenic_Zc3h12c|Gm25562_chr9_52286042_R | Primer3: not found at this Tm | N.d. | 0.16 |
| mm4_intergenic_Sec22a|Gm25079_chr16_35374806_F | Primer3: not found at this Tm | N.d. | 0.16 |
| mm4_intergenic_Sec22a|Gm25079_chr16_35374806_R | Primer3: not found at this Tm | N.d. | 0.16 |
| mm4_intron_Gm12665_chr11_24904714_F | Primer3: not found at this Tm | N.d. | 0.16 |
| mm4_intron_Gm12665_chr11_24904714_R | Primer3: not found at this Tm | N.d. | 0.16 |
| mm4_exon_Pitpnm2_chr5_124139604_F | Primer3: not found at this Tm | N.d. | 0.16 |
| mm4_exon_Pitpnm2_chr5_124139604_R | Primer3: not found at this Tm | N.d. | 0.16 |
| mm4_intergenic_Zbed3|Aggf1_chr13_95344382_F | Primer3: not found at this Tm | N.d. | 0.15 |
| mm4_intergenic_Zbed3|Aggf1_chr13_95344382_R | Primer3: not found at this Tm | N.d. | 0.15 |
| mm4_intergenic_Ccdc121|Dnah14_chr1_181596815_F | Primer3: not found at this Tm | N.d. | 0.15 |
| mm4_intergenic_Ccdc121|Dnah14_chr1_181596815_R | Primer3: not found at this Tm | N.d. | 0.15 |
| mm4_intergenic_Gm7518|Gm15686_chr6_144725835_F | TCGTCGGCAGCGTCTCTGCTGTCAGATCCTCAGGA | 59.9 | 0.14 |
| mm4_intergenic_Gm7518|Gm15686_chr6_144725835_R | GTCTCGTGGGCTCGGGTGGGGTGTTTAGGAAGCGA | 59.9 | 0.14 |
| mm4_intergenic_Tbc1d9|Ucp1_chr8_83283261_F | TCGTCGGCAGCGTCGGCAGGGAAAGTGGTTCAGT | 60.1 | 0.14 |
| mm4_intergenic_Tbc1d9|Ucp1_chr8_83283261_R | GTCTCGTGGGCTCGGTGGAACACTCCCTACCCCTT | 59.8 | 0.14 |
| mm4_intergenic_Nt5m|Gm12714_chr11_59894621_F | TCGTCGGCAGCGTCGGGCTGGGTTGGACAATGTA | 59.9 | 0.13 |
| mm4_intergenic_Nt5m|Gm12714_chr11_59894621_R | GTCTCGTGGGCTCGGTGCCTGCTTCTAATCTGCCC | 60.1 | 0.13 |
| mm4_intron_Sh3bp5_chr14_31397456_F | TCGTCGGCAGCGTCCTAGCACAGGTGACCACAGG | 60.0 | 0.13 |
| mm4_intron_Sh3bp5_chr14_31397456_R | GTCTCGTGGGCTCGGGTGAGAACTCGGGACAGCTC | 60.1 | 0.13 |
| mm4_intron_Pomgnt2_chr9_121987558_F | TCGTCGGCAGCGTCATTCCCTGCCATGCTGTTGT | 60.2 | 0.13 |
| mm4_intron_Pomgnt2_chr9_121987558_R | GTCTCGTGGGCTCGGAGATGGCACTGTGCTCTGTC | 60.0 | 0.13 |
| mm4_intron_Slc15a5_chr6_138071802_F | Primer3: not found at this Tm | N.d. | 0.13 |
| mm4_intron_Slc15a5_chr6_138071802_R | Primer3: not found at this Tm | N.d. | 0.13 |
| mm4_exon_Plb1_chr5_32247457_F | Primer3: not found at this Tm | N.d. | 0.13 |
| mm4_exon_Plb1_chr5_32247457_R | Primer3: not found at this Tm | N.d. | 0.13 |
| mm4_intron_Fam134b_chr15_25892688_F | Primer3: not found at this Tm | N.d. | 0.13 |
| mm4_intron_Fam134b_chr15_25892688_R | Primer3: not found at this Tm | N.d. | 0.13 |
| mm4_intergenic_Gm7910|Khdrbs2_chr1_31873156_F | Primer3: not found at this Tm | N.d. | 0.12 |
| mm4_intergenic_Gm7910|Khdrbs2_chr1_31873156_R | Primer3: not found at this Tm | N.d. | 0.12 |
| mm4_intergenic_Got2|Gm22780_chr8_96178757_F | Primer3: not found at this Tm | N.d. | 0.12 |
| mm4_intergenic_Got2|Gm22780_chr8_96178757_R | Primer3: not found at this Tm | N.d. | 0.12 |
| mm4_intron_Cpb2_chr14_75256625_F | Primer3: not found at this Tm | N.d. | 0.12 |
| mm4_intron_Cpb2_chr14_75256625_R | Primer3: not found at this Tm | N.d. | 0.12 |
| mm3_intergenic_Gm14693|Gm14687_chrX_67634853_F | Primer3: not found at this Tm | N.d. | 0.12 |
| mm3_intergenic_Gm14693|Gm14687_chrX_67634853_R | Primer3: not found at this Tm | N.d. | 0.12 |
| mm4_intron_Dnm3_chr1_162337419_F | Primer3: not found at this Tm | N.d. | 0.12 |
| mm4_intron_Dnm3_chr1_162337419_R | Primer3: not found at this Tm | N.d. | 0.12 |
| mm4_intron_Vav3_chr3_109429776_F | TCGTCGGCAGCGTCGACAGGTCACTCTGGGGTTG | 59.9 | 0.12 |
| mm4_intron_Vav3_chr3_109429776_R | GTCTCGTGGGCTCGGGCCAAAGAGAAGCTCTGTATGC | 59.6 | 0.12 |
| mm3_intergenic_Syf2|Gm16225_chr4_135110215_F | Primer3: not found at this Tm | N.d. | 0.12 |
| mm3_intergenic_Syf2|Gm16225_chr4_135110215_R | Primer3: not found at this Tm | N.d. | 0.12 |
| mm4_exon_Wwc1_chr11_35870911_F | TCGTCGGCAGCGTCGCTCACAGACGACTGACTCC | 60.1 | 0.11 |
| mm4_exon_Wwc1_chr11_35870911_R | GTCTCGTGGGCTCGGTGGCCTCAAAGTAGCCTGTG | 59.9 | 0.11 |
| mm4_intergenic_Gm26235|Gm25392_chr18_18120781_F | Primer3: not found at this Tm | N.d. | 0.11 |
| mm4_intergenic_Gm26235|Gm25392_chr18_18120781_R | Primer3: not found at this Tm | N.d. | 0.11 |
| mm4_intron_Abcb4_chr5_8938196_F | TCGTCGGCAGCGTCTTAGGGAGAGGGAGACTGGC | 60.0 | 0.11 |
| mm4_intron_Abcb4_chr5_8938196_R | GTCTCGTGGGCTCGGACTCCAAATGAGCCCAAGGG | 59.9 | 0.11 |
| mm3_intron_Nrxn2_chr19_6506814_F | TCGTCGGCAGCGTCGAGCTCATTGCACGGCATTC | 60.2 | 0.11 |
| mm3_intron_Nrxn2_chr19_6506814_R | GTCTCGTGGGCTCGGTGCCTCCTCACAGACTTCCT | 60.1 | 0.11 |
| mm4_exon_Clic6_chr16_92498377_F | TCGTCGGCAGCGTCAGAGTCTTGGGGCCCTCTAG | 60.0 | 0.11 |
| mm4_exon_Clic6_chr16_92498377_R | GTCTCGTGGGCTCGGAAAACACCCTTCCTCGACGC | 60.8 | 0.11 |
| mm4_exon_Kctd20_chr17_28967530_F | Primer3: not found at this Tm | N.d. | 0.11 |
| mm4_exon_Kctd20_chr17_28967530_R | Primer3: not found at this Tm | N.d. | 0.11 |
| mm4_intergenic_Clec4a2|Clec4b2_chr6_123150949_F | Primer3: not found at this Tm | N.d. | 0.11 |
| mm4_intergenic_Clec4a2|Clec4b2_chr6_123150949_R | Primer3: not found at this Tm | N.d. | 0.11 |
| mm2_intron_Slc22a1_chr17_12673924_F | TCGTCGGCAGCGTCGTAACCAGAAGCAGGCCAGG | 60.6 | 0.11 |
| mm2_intron_Slc22a1_chr17_12673924_R | GTCTCGTGGGCTCGGCCCCACACATGCACATAGAGT | 60.0 | 0.11 |
| mm4_intergenic_Gm24781|Rps13-ps1_chr8_86980429_F | TCGTCGGCAGCGTCTCTGAAGAGGAAGGACAGGT | 57.2 | 0.10 |
| mm4_intergenic_Gm24781|Rps13-ps1_chr8_86980429_R | GTCTCGTGGGCTCGGTGACAGGAATCCACAGGTGTG | 59.9 | 0.10 |
| mm4_intron_T2_chr17_8415782_F | Primer3: not found at this Tm | N.d. | 0.10 |
| mm4_intron_T2_chr17_8415782_R | Primer3: not found at this Tm | N.d. | 0.10 |
| mm4_intron_Gucy2f_chrX_142107823_F | TCGTCGGCAGCGTCAGTCCTGGGCTGCTTTTGAA | 59.8 | 0.10 |
| mm4_intron_Gucy2f_chrX_142107823_R | GTCTCGTGGGCTCGGTCACTGTTCAGTAGTTGGCCTC | 59.9 | 0.10 |
| mm4_intergenic_SNORA7|Gm8420_chr1_51940406_F | TCGTCGGCAGCGTCGCTGAACAACCGGATGTCCT | 60.3 | 0.09 |
| mm4_intergenic_SNORA7|Gm8420_chr1_51940406_R | GTCTCGTGGGCTCGGTGACTGGTGTCCACTGTTAACA | 59.4 | 0.09 |
| mm4_exon_Bcl7b_chr5_135181420_F | TCGTCGGCAGCGTCGAGGGACTGACCGGTAGAGA | 59.7 | 0.09 |
| mm4_exon_Bcl7b_chr5_135181420_R | GTCTCGTGGGCTCGGCATCCAACAGAGGCAGGTCT | 59.3 | 0.09 |
| mm4_intron_Atp2b2_chr6_113850211_F | TCGTCGGCAGCGTCCAGGGTGGCCAGTTAGGAAC | 60.3 | 0.09 |
| mm4_intron_Atp2b2_chr6_113850211_R | GTCTCGTGGGCTCGGACCCGTTCTCCAGAGATGGA | 59.9 | 0.09 |
| mm3_exon_Bmp2k_chr5_97027811_F | Primer3: not found at this Tm | N.d. | 0.09 |
| mm3_exon_Bmp2k_chr5_97027811_R | Primer3: not found at this Tm | N.d. | 0.09 |
| mm4_intergenic_Gm6277/Cables1/Mir1901|Cables1_chr18_11865092_F | Primer3: not found at this Tm | N.d. | 0.09 |
| mm4_intergenic_Gm6277/Cables1/Mir1901|Cables1_chr18_11865092_R | Primer3: not found at this Tm | N.d. | 0.09 |
| mm4_intron_Clcnkb_chr4_141405248_F | Primer3: not found at this Tm | N.d. | 0.09 |
| mm4_intron_Clcnkb_chr4_141405248_R | Primer3: not found at this Tm | N.d. | 0.09 |
| mm4_intergenic_Gm24471|Cartpt_chr13_99866830_F | TCGTCGGCAGCGTCATGGTCCCGCTTCTCCTACT | 60.0 | 0.08 |
| mm4_intergenic_Gm24471|Cartpt_chr13_99866830_R | GTCTCGTGGGCTCGGGTTGGAAGTCCTCACCAGCA | 59.8 | 0.08 |
| mm4_exon_Gm12012_chr11_16440134_F | Primer3: not found at this Tm | N.d. | 0.08 |
| mm4_exon_Gm12012_chr11_16440134_R | Primer3: not found at this Tm | N.d. | 0.08 |
| mm4_intergenic_Sdk2|1700025D23Rik_chr11_114068582_F | TCGTCGGCAGCGTCCCTGCCCATCCCATCAGAAA | 59.7 | 0.08 |
| mm4_intergenic_Sdk2|1700025D23Rik_chr11_114068582_R | GTCTCGTGGGCTCGGGTGTCTCTGCTCCGATTGCT | 60.1 | 0.08 |
| mm3_intergenic_Slit3|Gm12123_chr11_35270766_F | TCGTCGGCAGCGTCAGGGAGCTAGGCCATCAGAA | 60.0 | 0.08 |
| mm3_intergenic_Slit3|Gm12123_chr11_35270766_R | GTCTCGTGGGCTCGGGCCCTCCAGTTTGTGTGGTT | 60.7 | 0.08 |
| mm4_intergenic_Cyp2j7-ps|Gm12658_chr4_96241515_F | Primer3: not found at this Tm | N.d. | 0.08 |
| mm4_intergenic_Cyp2j7-ps|Gm12658_chr4_96241515_R | Primer3: not found at this Tm | N.d. | 0.08 |
| mm3_intergenic_Frmd5|Gm14021_chr2_121696465_F | Primer3: not found at this Tm | N.d. | 0.08 |
| mm3_intergenic_Frmd5|Gm14021_chr2_121696465_R | Primer3: not found at this Tm | N.d. | 0.08 |
| mm4_exon_Ada_chr2_163727603_F | TCGTCGGCAGCGTCGAGCCGTTCCAGAAGTTCCT | 59.6 | 0.07 |
| mm4_exon_Ada_chr2_163727603_R | GTCTCGTGGGCTCGGGCTGCTTCCTTCCTTGTCCT | 59.9 | 0.07 |
| mm4_intergenic_Ncoa2|Tram1_chr1_13469194_F | Primer3: not found at this Tm | N.d. | 0.07 |
| mm4_intergenic_Ncoa2|Tram1_chr1_13469194_R | Primer3: not found at this Tm | N.d. | 0.07 |
| mm4_intron_Dtx4_chr19_12494191_F | Primer3: not found at this Tm | N.d. | 0.07 |
| mm4_intron_Dtx4_chr19_12494191_R | Primer3: not found at this Tm | N.d. | 0.07 |
| mm4_intergenic_Gm22792|Bcat1_chr6_144900299_F | TCGTCGGCAGCGTCTGTGTAACTGGGGTTCTGCG | 60.2 | 0.07 |
| mm4_intergenic_Gm22792|Bcat1_chr6_144900299_R | GTCTCGTGGGCTCGGAGGTGAACGTAAGCCTGCTC | 60.0 | 0.07 |
| mm4_intron_Abcg3_chr5_104977918_F | Primer3: not found at this Tm | N.d. | 0.07 |
| mm4_intron_Abcg3_chr5_104977918_R | Primer3: not found at this Tm | N.d. | 0.07 |
| mm4_intergenic_Gm26018|BC018507_chr13_70493710_F | TCGTCGGCAGCGTCATCTTGCCAGAAGTCCAGCC | 60.0 | 0.06 |
| mm4_intergenic_Gm26018|BC018507_chr13_70493710_R | GTCTCGTGGGCTCGGACTCATTTAGAAAACTCACTGTCCA | 58.4 | 0.06 |
| mm4_intron_Ttyh2_chr11_114704285_F | Primer3: not found at this Tm | N.d. | 0.05 |
| mm4_intron_Ttyh2_chr11_114704285_R | Primer3: not found at this Tm | N.d. | 0.05 |
| mm4_intron_Nfatc2_chr2_168487516_F | TCGTCGGCAGCGTCTTTGTTTCTGGGAGGTGGGG | 59.8 | 0.05 |
| mm4_intron_Nfatc2_chr2_168487516_R | GTCTCGTGGGCTCGGGCCTGGCTTGTAAATGCTGG | 59.8 | 0.05 |
| mm4_intergenic_Nphp4|Gm13172_chr4_152607339_F | TCGTCGGCAGCGTCCAGTGTCTCCCCTGTTTCCC | 59.9 | 0.05 |
| mm4_intergenic_Nphp4|Gm13172_chr4_152607339_R | GTCTCGTGGGCTCGGAATAGCACTGGTGAGCAGGC | 60.3 | 0.05 |
| mm3_intergenic_Actr3b|Gm21655_chr5_25884720_F | Primer3: not found at this Tm | N.d. | 0.05 |
| mm3_intergenic_Actr3b|Gm21655_chr5_25884720_R | Primer3: not found at this Tm | N.d. | 0.05 |
| mm4_intergenic_Gm6132|Gm26018_chr13_70125463_F | TCGTCGGCAGCGTCTTAGAGGGACGAGTCTGGGG | 60.0 | 0.05 |
| mm4_intergenic_Gm6132|Gm26018_chr13_70125463_R | GTCTCGTGGGCTCGGGGTGTGTGAGAGAGCCCAAA | 59.8 | 0.05 |
| mm4_intergenic_Gm13219|Gm13220_chr2_9448031_F | Primer3: not found at this Tm | N.d. | 0.05 |
| mm4_intergenic_Gm13219|Gm13220_chr2_9448031_R | Primer3: not found at this Tm | N.d. | 0.05 |
| mm4_intergenic_Gm13855|Gm14546_chr6_34233190_F | Primer3: not found at this Tm | N.d. | 0.05 |
| mm4_intergenic_Gm13855|Gm14546_chr6_34233190_R | Primer3: not found at this Tm | N.d. | 0.05 |
| mm4_intron_Reps2_chrX_162508936_F | Primer3: not found at this Tm | N.d. | 0.04 |
| mm4_intron_Reps2_chrX_162508936_R | Primer3: not found at this Tm | N.d. | 0.04 |
| mm4_intergenic_Gm22331|Gm24937_chr1_113533122_F | Primer3: not found at this Tm | N.d. | 0.04 |
| mm4_intergenic_Gm22331|Gm24937_chr1_113533122_R | Primer3: not found at this Tm | N.d. | 0.04 |
| mm4_intergenic_Armc3|4930447M23Rik_chr2_19332161_F | Primer3: not found at this Tm | N.d. | 0.04 |
| mm4_intergenic_Armc3|4930447M23Rik_chr2_19332161_R | Primer3: not found at this Tm | N.d. | 0.04 |
| mm2_intron_Coro1c_chr5_113907994_F | Primer3: not found at this Tm | N.d. | 0.04 |
| mm2_intron_Coro1c_chr5_113907994_R | Primer3: not found at this Tm | N.d. | 0.04 |
| mm4_intergenic_D3Ertd751e|Gm25714_chr3_43592558_F | Primer3: not found at this Tm | N.d. | 0.04 |
| mm4_intergenic_D3Ertd751e|Gm25714_chr3_43592558_R | Primer3: not found at this Tm | N.d. | 0.04 |
| mm4_intron_Dgkg_chr16_22588253_F | TCGTCGGCAGCGTCCAGATGCATCCCCAGTGTGT | 60.0 | 0.03 |
| mm4_intron_Dgkg_chr16_22588253_R | GTCTCGTGGGCTCGGCTTGTCCCTGATGGAGACCG | 59.8 | 0.03 |
| mm3_intergenic_D3Ertd751e|Gm25714_chr3_42539290_F | Primer3: not found at this Tm | N.d. | 0.03 |
| mm3_intergenic_D3Ertd751e|Gm25714_chr3_42539290_R | Primer3: not found at this Tm | N.d. | 0.03 |
| mm4_intergenic_4930505K14Rik|Gm15407_chr5_148819647_F | TCGTCGGCAGCGTCAATAGGCAGACACGGCTCTG | 59.8 | 0.03 |
| mm4_intergenic_4930505K14Rik|Gm15407_chr5_148819647_R | GTCTCGTGGGCTCGGCCTCGGTAGTAAACTAGTAGTGGC | 59.9 | 0.03 |
| mm4_intergenic_Gm9755|Nat3_chr8_67522173_F | TCGTCGGCAGCGTCCATGACCACTCAGGGACAGG | 59.7 | 0.03 |
| mm4_intergenic_Gm9755|Nat3_chr8_67522173_R | GTCTCGTGGGCTCGGAGTTTTGGCTGTTGCACTGC | 60.1 | 0.03 |
| mm4_intron_Dhx34_chr7_16205535_F | TCGTCGGCAGCGTCCGCTCAGACTTCACCTGGTT | 59.9 | 0.03 |
| mm4_intron_Dhx34_chr7_16205535_R | GTCTCGTGGGCTCGGTAGGAGGGTCCCTTAGAGCG | 59.8 | 0.03 |
| mm4_intergenic_Rxra|2810430I11Rik_chr2_27786191_F | Primer3: not found at this Tm | N.d. | 0.03 |
| mm4_intergenic_Rxra|2810430I11Rik_chr2_27786191_R | Primer3: not found at this Tm | N.d. | 0.03 |
| mm3_intergenic_Sema3d|Gm23243_chr5_12700790_F | Primer3: not found at this Tm | N.d. | 0.03 |
| mm3_intergenic_Sema3d|Gm23243_chr5_12700790_R | Primer3: not found at this Tm | N.d. | 0.03 |
| mm3_intron_Kcnh1_chr1_192480188_F | TCGTCGGCAGCGTCTGAGGCTCAAGGCACAAGAG | 59.9 | 0.03 |
| mm3_intron_Kcnh1_chr1_192480188_R | GTCTCGTGGGCTCGGCACTAGGTGCTAAGTGGGCC | 60.1 | 0.03 |
| mm4_intergenic_Gm8840|Ikzf2_chr1_69524904_F | Primer3: not found at this Tm | N.d. | 0.02 |
| mm4_intergenic_Gm8840|Ikzf2_chr1_69524904_R | Primer3: not found at this Tm | N.d. | 0.02 |
| mm3_intergenic_Rpl10-ps3|1600029D21Rik_chr9_50467576_F | TCGTCGGCAGCGTCAACAAAGCCGTGGAGTGCTA | 59.8 | 0.02 |
| mm3_intergenic_Rpl10-ps3|1600029D21Rik_chr9_50467576_R | GTCTCGTGGGCTCGGCCCCAGCTTCTCGAATCGAA | 59.8 | 0.02 |
| mm4_exon_Zfp770_chr2_114196615_F | TCGTCGGCAGCGTCTGAGTCTGCTTGGAACTCTG | 57.1 | 0.02 |
| mm4_exon_Zfp770_chr2_114196615_R | GTCTCGTGGGCTCGGTGTCCCTTTTCAGTGTTCGGA | 59.5 | 0.02 |
| mm3_intergenic_Pkdcc|Gm24240_chr17_83242326_F | Primer3: not found at this Tm | N.d. | 0.02 |
| mm3_intergenic_Pkdcc|Gm24240_chr17_83242326_R | Primer3: not found at this Tm | N.d. | 0.02 |
| mm4_intergenic_Gm23370|Mgat5_chr1_127364290_F | Primer3: not found at this Tm | N.d. | 0.02 |
| mm4_intergenic_Gm23370|Mgat5_chr1_127364290_R | Primer3: not found at this Tm | N.d. | 0.02 |
| mm4_intron_Zfp395_chr14_65374203_F | TCGTCGGCAGCGTCCAGTGAGCTCATTTGCTGCC | 59.8 | 0.02 |
| mm4_intron_Zfp395_chr14_65374203_R | GTCTCGTGGGCTCGGCAAAGTGGCATGGGTGGTTG | 59.9 | 0.02 |
| mm4_intergenic_Gldc|Mbl2_chr19_30200819_F | Primer3: not found at this Tm | N.d. | 0.02 |
| mm4_intergenic_Gldc|Mbl2_chr19_30200819_R | Primer3: not found at this Tm | N.d. | 0.02 |
| mm4_intron_Ppargc1a_chr5_51552686_F | TCGTCGGCAGCGTCTATCACTGCACCACACGGAC | 60.0 | 0.02 |
| mm4_intron_Ppargc1a_chr5_51552686_R | GTCTCGTGGGCTCGGGGAGGATCGGAGCTGCTAAC | 59.9 | 0.02 |
| mm4_intergenic_Gm22420|Ergic1_chr17_26596249_F | TCGTCGGCAGCGTCAATACTATCCCCAGGCCCCA | 59.7 | 0.02 |
| mm4_intergenic_Gm22420|Ergic1_chr17_26596249_R | GTCTCGTGGGCTCGGGGGAGCGCTATTCCTGGAC | 59.9 | 0.02 |
| mm4_intergenic_Mgat5b|Gm11728_chr11_117026935_F | TCGTCGGCAGCGTCCCCAAGCCATTGCCCTATGA | 60.1 | 0.01 |
| mm4_intergenic_Mgat5b|Gm11728_chr11_117026935_R | GTCTCGTGGGCTCGGTACAGAACAGCACCAGTGGG | 59.6 | 0.01 |
| mm4_intergenic_Gm2001|Gm2016_chr12_87860399_F | Primer3: not found at this Tm | N.d. | 0.01 |
| mm4_intergenic_Gm2001|Gm2016_chr12_87860399_R | Primer3: not found at this Tm | N.d. | 0.01 |
| mm4_intergenic_H6pd|Gm13067_chr4_150029512_F | TCGTCGGCAGCGTCACTGTCTGGTGGGCAGAGA | 60.1 | 0.01 |
| mm4_intergenic_H6pd|Gm13067_chr4_150029512_R | GTCTCGTGGGCTCGGGAGGGAGGGTGGAAGACTCT | 59.9 | 0.01 |
| mm4_intron_Mark1_chr1_184918115_F | TCGTCGGCAGCGTCGATGGGTGAGCTCTGTCTCC | 59.5 | 0.01 |
| mm4_intron_Mark1_chr1_184918115_R | GTCTCGTGGGCTCGGGCTAGAGGTGGAGGTGGGAT | 60.3 | 0.01 |
| mm3_intron_Cd209g_chr8_4136461_F | Primer3: not found at this Tm | N.d. | 0.00 |
| mm3_intron_Cd209g_chr8_4136461_R | Primer3: not found at this Tm | N.d. | 0.00 |
| mm4_intergenic_Foxn3|Gm26839_chr12_99517256_F | Primer3: not found at this Tm | N.d. | 0.00 |
| mm4_intergenic_Foxn3|Gm26839_chr12_99517256_R | Primer3: not found at this Tm | N.d. | 0.00 |
| mm4_intron_Alk_chr17_72275799_F | TCGTCGGCAGCGTCGCGAAGATGTTTCAACTGGTCC | 60.0 | 0.00 |
| mm4_intron_Alk_chr17_72275799_R | GTCTCGTGGGCTCGGGCGGCAGACTCTCTGGTATC | 59.9 | 0.00 |
| mm4_intron_Disc1_chr8_125108709_F | TCGTCGGCAGCGTCCATGAGACCAGGGCCTGATG | 60.1 | 0.00 |
| mm4_intron_Disc1_chr8_125108709_R | GTCTCGTGGGCTCGGGGGAAAATGCCATTGCGAGA | 59.1 | 0.00 |
| mm4_exon_Ucp2_chr7_100493842_F | TCGTCGGCAGCGTCAAGGGTTGTTTGTGCCTGGA | 60.0 | 0.00 |
| mm4_exon_Ucp2_chr7_100493842_R | GTCTCGTGGGCTCGGCCAGTCTCCCTGTGTCCCTA | 59.9 | 0.00 |
| mm4_intron_Dock8_chr19_25190900_F | TCGTCGGCAGCGTCCCATCTAGACCGCTGCTGAG | 59.9 | 0.00 |
| mm4_intron_Dock8_chr19_25190900_R | GTCTCGTGGGCTCGGTGCCTTCCCAACACCTTTCT | 59.4 | 0.00 |
| mm4_intron_Lsamp_chr16_41661493_F | TCGTCGGCAGCGTCTGGAGTAGGTAGGTGAGCCC | 60.0 | 0.00 |
| mm4_intron_Lsamp_chr16_41661493_R | GTCTCGTGGGCTCGGACCCCTCTGACCTCAACAGT | 60.1 | 0.00 |
| mm4_intron_Aspm_chr1_139465683_F | Primer3: not found at this Tm | N.d. | 0.00 |
| mm4_intron_Aspm_chr1_139465683_R | Primer3: not found at this Tm | N.d. | 0.00 |
| mm4_intergenic_Gm4763|Cd177_chr7_24738804_F | Primer3: not found at this Tm | N.d. | 0.00 |
| mm4_intergenic_Gm4763|Cd177_chr7_24738804_R | Primer3: not found at this Tm | N.d. | 0.00 |
| mm4_intron_Mrpl35_chr6_71823360_F | TCGTCGGCAGCGTCAGGAGACCAGATACTCGATGCT | 60.1 | 0.00 |
| mm4_intron_Mrpl35_chr6_71823360_R | GTCTCGTGGGCTCGGAGGTTCAACCACCTCTCTCA | 57.8 | 0.00 |
| mm4_intron_Pde11a_chr2_76003199_F | TCGTCGGCAGCGTCGAATGGCTGCTGACCCAGAA | 60.3 | 0.00 |
| mm4_intron_Pde11a_chr2_76003199_R | GTCTCGTGGGCTCGGACTCCGATGTGTAAAGGGTGG | 59.7 | 0.00 |
| mm4_intron_Mak_chr13_41052199_F | TCGTCGGCAGCGTCGGGCAGGATTCAGGAAACCA | 59.9 | 0.00 |
| mm4_intron_Mak_chr13_41052199_R | GTCTCGTGGGCTCGGTTCAGAAGCCAGTGCCTGAG | 59.9 | 0.00 |
| mm4_intron_BC030867_chr11_102251721_F | TCGTCGGCAGCGTCTAAAGGCCTTCCTGGGAGCT | 60.5 | 0.00 |
| mm4_intron_BC030867_chr11_102251721_R | GTCTCGTGGGCTCGGCCTCGGGTCTCACATCATCC | 59.6 | 0.00 |
| mm4_intron_Ap2a1_chr7_44922722_F | TCGTCGGCAGCGTCGGCACAGGGCTTGAGATAGG | 60.1 | 0.00 |
| mm4_intron_Ap2a1_chr7_44922722_R | GTCTCGTGGGCTCGGCCTGGGCTCTGTGAAGGC | 60.0 | 0.00 |
| mm4_intergenic_Rtn4rl1|Rpa1_chr11_75268679_F | TCGTCGGCAGCGTCAAGGCTGAGCTTTGTCCAGG | 60.2 | 0.00 |
| mm4_intergenic_Rtn4rl1|Rpa1_chr11_75268679_R | GTCTCGTGGGCTCGGTGTCATCAGCCTCCGATCCT | 60.3 | 0.00 |
| mm4_intergenic_Pex5l|AC113989.1_chr3_33224543_F | TCGTCGGCAGCGTCCCCTGATTGCTGGGTCTACC | 59.8 | 0.00 |
| mm4_intergenic_Pex5l|AC113989.1_chr3_33224543_R | GTCTCGTGGGCTCGGCAGCAGATTGGTGGGGAAGG | 60.6 | 0.00 |
| mm4_intergenic_Olfm2|Col5a3_chr9_20746420_F | Primer3: not found at this Tm | N.d. | 0.00 |
| mm4_intergenic_Olfm2|Col5a3_chr9_20746420_R | Primer3: not found at this Tm | N.d. | 0.00 |
| mm4_intergenic_Golga5|Chga_chr12_102552926_F | TCGTCGGCAGCGTCTGGCAAAGTGAGAATCGGGG | 60.3 | 0.00 |
| mm4_intergenic_Golga5|Chga_chr12_102552926_R | GTCTCGTGGGCTCGGGCCAAAGGCCACCTCTAGTT | 59.9 | 0.00 |
| mm4_intergenic_Gm27039|Adcyap1_chr17_92763312_F | Primer3: not found at this Tm | N.d. | 0.00 |
| mm4_intergenic_Gm27039|Adcyap1_chr17_92763312_R | Primer3: not found at this Tm | N.d. | 0.00 |
| mm4_intergenic_Gm26474|RP24-351J24.2_chr5_120376625_F | Primer3: not found at this Tm | N.d. | 0.00 |
| mm4_intergenic_Gm26474|RP24-351J24.2_chr5_120376625_R | Primer3: not found at this Tm | N.d. | 0.00 |
| mm4_intergenic_Gm16397|Gm10344_chrX_134734216_F | Primer3: not found at this Tm | N.d. | 0.00 |
| mm4_intergenic_Gm16397|Gm10344_chrX_134734216_R | Primer3: not found at this Tm | N.d. | 0.00 |
| mm4_intergenic_Gm12906|Gm12907_chr4_107762062_F | Primer3: not found at this Tm | N.d. | 0.00 |
| mm4_intergenic_Gm12906|Gm12907_chr4_107762062_R | Primer3: not found at this Tm | N.d. | 0.00 |
| mm4_intergenic_Gm12541|Fgf2_chr3_37363798_F | Primer3: not found at this Tm | N.d. | 0.00 |
| mm4_intergenic_Gm12541|Fgf2_chr3_37363798_R | Primer3: not found at this Tm | N.d. | 0.00 |
| mm4_intergenic_A330048O09Rik|Zfp169_chr13_48285474_F | TCGTCGGCAGCGTCGGAGAAGCCGTTGTTCCTCT | 59.6 | 0.00 |
| mm4_intergenic_A330048O09Rik|Zfp169_chr13_48285474_R | GTCTCGTGGGCTCGGGGAGTGTCAGTTTCCCAGCA | 59.8 | 0.00 |
| mm4_exon_Lmtk3_chr7_45803873_F | TCGTCGGCAGCGTCAGATGAGTCCCCTGATCCCC | 60.1 | 0.00 |
| mm4_exon_Lmtk3_chr7_45803873_R | GTCTCGTGGGCTCGGTCTGGGCCCAAAAGAGTTCG | 60.2 | 0.00 |
| mm3_intergenic_Sntb1|Has2_chr15_56071167_F | Primer3: not found at this Tm | N.d. | 0.00 |
| mm3_intergenic_Sntb1|Has2_chr15_56071167_R | Primer3: not found at this Tm | N.d. | 0.00 |
These only list off-targets that have primers in the table above. Primers underlined, off-targets in bold.
| ontarget_mm0_exon_5730457N03Rik/Evx1_chr6_52313620 |
TTGCAGCAGGAGGATGACAGCTTAGAAAGAAGAGGGCAATGGGGCTTCCTCCCAGAGGCGGTGCGGCACAGAGGAGCGCT CGCATCACAAGGTGACCCTAGCTCCCCACTGCCATCT |
| mm4_intron_Atp2b4_chr1_133771957 |
ATCCTGTCCCGGTTAGCTCAGAGGAGTCAGAGGAGAAAGCTTAGAGACTTCCTCCCAGAGGTGGCTGTGAGGCGTGCTGA GGGCATATGTGACGTGATGCCTGTGT |
| mm4_intergenic_Terf2|C630050I24Rik_chr8_107118266 |
AGTGACTCTGCAAAGGAGCCCCAGTTTCCAAGGTCACCTCCCTCTCTGGGAGGGAGCCCTAAGCACCCAGAATGGTCCCC AGGATGAGATAATCAAGGCACGCCTAAGAAACATCTGGGATACGTGTACACCCACC |
| mm2_exon_Sh2b3_chr5_121836071 | TATTCACCCCTCCTGGCTCAGATGGCGTTTCCTCCCAGAGGAGGCCTGGGGAACAAGGTTCAGA |
| mm3_intron_Elovl1_chr4_118429291 |
CCAACTTTGAGGAGGAGGGGACCTAGCCCATGAGGCTCCCTCCCAGAAGAGGGAAAGATTCCTGAGACCTCCCCCACTCT CCCACCTCCTCACATACCACTGGTGTCCTCACCCCTCCCTGGTAGGGAAGGGTGATGC |
| mm3_intergenic_5031439G07Rik|Upk3a_chr15_84996341 |
TCACAATCAACAGGCACCCTTTGGGCATGGGTCTTCCTCCCAAAGAAGGAGTCGGCAGCCCCAGGGCAGGACAGAGCGGG TGCTGAAGCTGAGCAGGCACAGCCCACCCAGCAGCCGGTGAGGAGGTCTGCCTGGACAA |
| mm4_intron_Nfic_chr10_81424584 |
CTGCCTTGGGACACTTCTCATCGTCTCTGATCCCATCCCCCTCTGGAAGGAGACCCCAAACGTCAACCCTGCACTGCCTC AGTTTCCCCACTGCCAGGATGGAAGCAGCGAGCCGCAAAGCTATGAGGAG |
| mm4_intron_Hydin_chr8_110361251 |
GACAAATGTCTGGGCGGAGAAACACAGGGCTATTCCCAGGCCCCAGGTTCTGAACAGGAAGATACCCCTCTTCTGGGAGG AAGTTCCGTTACAATTGTTCTTCTTAAAAAAAAAAAAAAAGCACCCCTCCCCTCCCAAAA |
| mm2_intergenic_Fnip2|Gm3513_chr3_79530536 |
CCCCATAGCTCAGCAGTAGCATGCCGCAGTCAGCCCTGGGGCTGCCTCCCAGAGGTGGAGCTCCACTTCCCCACCACTCA ACCCTTCTTTCCTGACAGGAGCAGGTAAGAGCACACGT |
| mm4_intergenic_Gm23735|Fndc3a_chr14_72465504 |
TCTGCTTGGACTGTGTAGGTATCTGAATGCCCCTTCTGGGAGGAGGCTCCTTCATAGTCCTTCAAAGTTACTTAACTGAT ACACTGATGAGTGCTCACTGAATTACAGAACCCACGTCTTCCAGTGAC |
| mm4_exon_Utp18_chr11_93862003 |
CCCTGCCCTTTTCATTCCCTAAGGCAAAGTATCCACCTCTGGGAGAAAAATCCATGGTTTGAACACGAGAAAGAGTACTC TTTTTAAAAACTGGAAAGTTAGAAAATACTGTACAGGAAGGAAGATGAACCTGCAGGAGA |
| mm4_intergenic_Mirlet7b|Ppara_chr15_85724462 |
GTCTGTCCTAGCTGGCCAACGTGTTGGGCTTCCTCCCAAAGAAGGCAGGGGTGACCAGGCAAAGAGGTGCAGCTCTGGCC TTCATGTCTCTCAGC |
| mm4_intron_Fhit_chr14_9841146 |
CTCAGCATCGACAAATGGCATAGGAAATTCATTTTTAATGCACTCATTTAGGGCTGCCTCCCAGAGAGGGAGAGGCCTGC ATATATTAATAAAGGCCAAGAAATAAATGGCATAGCTGTCCATACTTCACCCTGA |
| mm4_intron_Tmc1_chr19_20894640 |
GAACTGTCCAGAGCAGCTGTGGCCGTAGTTCTCTTGCCTTGAGAATGCAGGTCCAACAACAGCAGAACCATGCCCACTTC TGGGAGGAAGCGCTAATTGGTCACTTGCCATTTACAGAGA |
| mm4_intergenic_Tbr1|Gm13555_chr2_61814573 |
CTTGGAGGTGACTGGCGAATCTTTATAAATGCAAACTTGGACGGGCCTTCCTCTCAGAGAGGGAGGTCTCAGGGCATTGT TCCGGGTGAGGTGGAGAAAGAC |
| mm4_intergenic_Faim2|Gm5808_chr15_99554438 |
CCGCTCTGACCCATCTCATGGCCAGAGCCTGTACGGAAGCAGGAAATGATATTACACTAGGAAGGAGTCTGACCCTGGTC CCCTTCTGGGAGGAAGACTCAGCAGGGTAAATAAATTAGACACACGCTCTTGTTT |
| mm3_intron_Fam196b_chr11_34408005 |
ATATAGCACCCAGGGGCAGAGCAGGGAATCTAGTGGATTTAAGCTGTAAAACGCCTCTAAGAGTTTGAGAAGATAATGGG GCTTTTCCCCAGAGGTGGAGGGGTGGTCCATCTCCATCCAAGC |
| mm4_intergenic_Gm23176|Nt5e_chr9_88093262 |
CAAGCACATGGGCAGATTCCCTGGAGCTTCCTACCAGAGATGGAAGAGTCCAGTACATTCATATTGCTTGTCATGCAATA CAGGCC |
| mm4_intron_Csmd2_chr4_128462076 |
GGGTACACACACAGTTGCCTGTCTGGGCATAGTTTGTGGCCAGACAGAAAACACTATTACTTCAATACATTGGATATTAC ATGGGGTTGGGGCATCCAACCAGAGGTGGGGGGAGGTACCCCACCTCCTCCCTGGTTCT |
| mm4_exon_Tmem147_chr7_30728260 |
AGGGCTAGACTGCATACCAGACTGATGTTGGAGTCAATGCTCATCTGGATATATTTCCAGTCAAATTCAATGCCTCGGGC TCCCACCCAGAGGGGGATGCATCTGAGGAAGGCAAAAGGAGGCAGTCTC |
| mm4_intergenic_A430078I02Rik|Pcbp1_chr6_86495381 |
AAGACACACACACATGCCCTCCACCTCTCTAAGGAGGCTCTCTTCCCCCACATACCCACCACCTCTGTAAGGAGGCCCCC TACCCCCACATACCCACCACCTCTGTAAGGAGCCCCTCACACAC |
| mm4_intergenic_Lipg|Rpl17_chr18_74978834 |
TCCGTTCTTCGTTTAGCTGGATTAACTCTTCATGGAGGAGACAATGGCGCGTCCACCCAGGGGTGGATCCCATTCTTTTG ACCTTCAATGGGTCTCGACTGCAACTGTCA |
| mm2_intergenic_Gm15606|Opcml_chr9_28366732 |
AGAAAACCAAAGACCTCAGGTAGGGAGTTTCTGCCTCTGGAAGGAAGCCCCACATGGAGTCATAGAGAATCAATTCCATG GTTGGTGAGAGAAGTGAAAGGTTGCAAAGGTGGAAGCTG |
| mm4_exon_Lrrfip1_chr1_91101233 |
CCGTAACATGCCTAGCCTGTCTGCAGCCACACTGGCATCTCTGGGTGGGACTTCCTCCCGGAGAGGGAGTGGAGATACCT CCATCTCCATGGACACCGAAGCAT |
| mm2_intron_Ptprf_chr4_118245709 |
GACAGACCCTACCAGGCTCTGGGGTCAGGGTCCACCCAGCTCACAAACCCACCGAGGCACACAAGCCACTCCAGCCCCAC CACTGTGAGGAAGCCCCATGCCTCGCCAACACCAGTGTGAGGAGCAC |
| mm4_intergenic_Gm7518|Gm15686_chr6_144725835 |
TCTGCTGTCAGATCCTCAGGAACTGGATGGGGCTCCCTCTCACAGATGGGCTGTCAATATTTAATTCCATACAGGGTCAG AGTCTTATGTGTAGACTGGTAAGTTTCGCTTCCTAAACACCCCAC |
| mm4_intergenic_Tbc1d9|Ucp1_chr8_83283261 |
GGCAGGGAAAGTGGTTCAGTTTGATTAGAAGGCACCAAAACATAAGTGTGTATATGCAAAATGCAACCCATTTGTTTTGG TAAGAGATTCTAATTGGGGCTGCCTCACAGATGGGGAAGGGGTAGGGAGTGTTCCA |
| mm4_intergenic_Nt5m|Gm12714_chr11_59894621 |
GGGCTGGGTTGGACAATGTAGGTAAAACTGAGCCCTAAATTCCACCTCTGGGAGGGAGTACAATCAGAGAGTCAAATTAG AAGCTTGTCAGAGTCAAAGAGCTTGAGAGCCAGGTCAAAGGGCAGATTAGAAGCAGGCA |
| mm4_intron_Sh3bp5_chr14_31397456 |
CTAGCACAGGTGACCACAGGTCCCTCCAACTTGCCCGCCCCTCCTTTATATTCATCATTCTTCCCCACCCCTCCTCCCCC CGCCTCTGGGAGCCAGACCCAGAAGGAGCTGTCCCGAGTTCTCAC |
| mm4_intron_Pomgnt2_chr9_121987558 |
ATTCCCTGCCATGCTGTTGTGTGCAACAGGCTGTCCAGTGCAATGGGCCTTCCTTCCAGGAGAGGGGAGGAGCAGAGTGC CTAGGACAGAGCACAGTGCCATCT |
| mm4_intron_Vav3_chr3_109429776 |
GACAGGTCACTCTGGGGTTGTTGCTTGCTGATCCTTCTCTTAGGGCAGGATCCTTCTCTCAGGCAGAAGCCAACCTGCTC TGTGGGGAAGCTCCATTGTCCTTTTAGATGGCATACAGAGCTTCTCTTTGGC |
| mm4_exon_Wwc1_chr11_35870911 |
GCTCACAGACGACTGACTCCCCGGAACCCACCTCTGTGCTGAAGCCTCATACACGCCACTGTCCCCGGCTACTGACTCGT CGGACACTGCAGCGGACACACAGGCTACTTTGAGGCCA |
| mm4_intron_Abcb4_chr5_8938196 |
TTAGGGAGAGGGAGACTGGCACCGAGGCTTGGAGTGGAAGTGAAACCTAATTGTGGCTTCATCCCAGAGCAGGTGGGGCT GGGCCCTTGGGCTCATTTGGAGT |
| mm3_intron_Nrxn2_chr19_6506814 |
GAGCTCATTGCACGGCATTCCGCATCCTGGTAACCTGTGACTAGTCGCCTGGGCATGGAAGTTTAGGGGATGATGCTTCC TCCCAGAGCAGGAAGGGCAGGAAGTCTGTGAGGAGGCA |
| mm4_exon_Clic6_chr16_92498377 |
AGAGTCTTGGGGCCCTCTAGATTTTGCATCAAGCGAAACCTTCGCTTCTAGAACCGCGAGTGGGGTGTCCTCCCGGAGGG GGCACGTCAGCCCCTGCCCCTCACCCTGAGCAGCGTCGAGGAAGGGTGTTTT |
| mm2_intron_Slc22a1_chr17_12673924 |
GTAACCAGAAGCAGGCCAGGGGGAAGAGACACTGGGCTTCCTCCCAGAGGCAGCCCTGCCTGTATTGACGTTAAAACCTT TAAGGAAAAGGGAAGAAAGAAGGAAGGGATCCTAAGAAACTCTATGTGCATGTGTGGGG |
| mm4_intergenic_Gm24781|Rps13-ps1_chr8_86980429 |
TCTGAAGAGGAAGGACAGGTTAAACATCAGTTCTAACTCTTTGACCCACTAATACAAAGGGGCTGCTTCCCAGATGGGGT GGCAGTCACACCTGTGGATTCCTGTCA |
| mm4_intron_Gucy2f_chrX_142107823 |
AGTCCTGGGCTGCTTTTGAAAGTGGAATGTCCTTTACCCCTTATGGAAGGAAGCCCCTTCCACAATATAAGGACTCAGTG AGTATAATCTCAGAGAGGCCAACTACTGAACAGTGA |
| mm4_intergenic_SNORA7|Gm8420_chr1_51940406 |
GCTGAACAACCGGATGTCCTACCCATTCTATGCTATAGGGCTTCCTCTCATAAGGGGAGACCTCTTGTTAACAGTGGACA CCAGTCA |
| mm4_exon_Bcl7b_chr5_135181420 |
GAGGGACTGACCGGTAGAGATGTGGAGAACACCGGAGAGAGGCTCTTCCGGGACGGAGGGGCTTTCGCCACCTTTGGGCA GAAGACCCATGGGAGATGCATCCTGTGCCTGAGGCAGACCTGCCTCTGTTGGATG |
| mm4_intron_Atp2b2_chr6_113850211 |
CAGGGTGGCCAGTTAGGAACCTGGGGCTTCTTCCCAGTGTTGGCCCTAGTGTCAACTTCCCCCATGTCCCTGGTCTCCAG ATGAGCTGCCAATGGCAGTGGTAAGGAGAAGCATCCATCTCTGGAGAACGGGT |
| mm4_intergenic_Gm24471|Cartpt_chr13_99866830 |
ATGGTCCCGCTTCTCCTACTGCCCTTGGCCATTCTATTCCAGGAGAGTAGACAGCACTGGTCAGACATCAATTCAAAATC TCTATGTGATGTGACATTGGGACTCCTCCCACAGGAGGATGCTGGTGAGGACTTCCAAC |
| mm4_intergenic_Sdk2|1700025D23Rik_chr11_114068582 |
CCTGCCCATCCCATCAGAAACAGCTGTTCTTTAGGGTGTTGTTACAGGGCTTGCTCACAGAGGGGGCCTGAGAGTCAGTT TTGCAGCAATTGCTTCTTAGCCAGCAATCGGAGCAGAGACAC |
| mm3_intergenic_Slit3|Gm12123_chr11_35270766 |
AGGGAGCTAGGCCATCAGAACCCTGTCCTCACAGTGCTCCGCAGCCCAGGGATGGCTCAGAAGAGAGAGCTGGGGCTTGC TCCCAGAGAAAGGCAAAAAGGGAACCACACAAACTGGAGGGC |
| mm4_exon_Ada_chr2_163727603 |
GAGCCGTTCCAGAAGTTCCTTCTTCTCTTCCTCTGGGAGGAAGCTTGACTTCGCTGCGTTGATGTTCTAGAAGGGGGAAA CATGGAGTCAGGACAAGGAAGGAAGCAGC |
| mm4_intergenic_Gm22792|Bcat1_chr6_144900299 |
TGTGTAACTGGGGTTCTGCGGGAAAACCAAGAAAGAAAAAGAAGCAGAGCCTCACTCCCTAAAGAGCATGGGGGTCCCTC ACAGTGGAGGGAGCAGGCTTACGTTCACCT |
| mm4_intergenic_Gm26018|BC018507_chr13_70493710 |
ATCTTGCCAGAAGTCCAGCCAAGTGCTGAAAGTAAAAGCAAATTTGCCCAAAATCTACCCACTGTGGTAGGAAGCCCCAA GATTCCTGTCTGTTTGGACAGTGAGTTTTCTAAATGAGT |
| mm4_intron_Nfatc2_chr2_168487516 |
TTTGTTTCTGGGAGGTGGGGAGGGGGATCCCTTTCCACTACTGAACTGGAATCCACTCTCAAGAAGAGTTGGGACTCCCT GGGGTCCCCAAGGGGCTTCATCCAAGGGGAGGAGGGTTTCCCAGCATTTACAAGCCAGGC |
| mm4_intergenic_Nphp4|Gm13172_chr4_152607339 |
CAGTGTCTCCCCTGTTTCCCGGGGACACCTCATTTACCCTCCTTCCAAGTTTCTGCTCTCCAGCTGTTACAGCCCCAGAA TTCTGGGGGTGCCTCCAAGAGGCGGGTGTTTGCCTGCTCACCAGTGCTATT |
| mm4_intergenic_Gm6132|Gm26018_chr13_70125463 |
TTAGAGGGACGAGTCTGGGGCAAGAGTTGGTTAACAATGACGCTTCTTCCCACAGGAGGCCACAGAGTCACTGTGGTCTT TCTGTGGGATGTTTTGTTTTGGGCTCTCTCACACACC |
| mm4_intron_Dgkg_chr16_22588253 |
CAGATGCATCCCCAGTGTGTACGACATGACTGTCTAGAACCTTGGTCTTCCTCTGGGAGGAAGCCGGGGCCTTAGACAGG TGAGCACTTACATTCTAGCTTATCCTGAGGTCGCCCGGTCTCCATCAGGGACAAG |
| mm4_intergenic_4930505K14Rik|Gm15407_chr5_148819647 |
AATAGGCAGACACGGCTCTGAGGTTCCACCCACAGTGTCCTTTGAAAGAACCTCCTCTCGGAGGAAGTCTCTTGGCAATT TGCCACTACTAGTTTACTACCGAGG |
| mm4_intergenic_Gm9755|Nat3_chr8_67522173 | CATGACCACTCAGGGACAGGCCACCTCTGGCAGGAAGCACCCACTCTTCACCGCAGTGCAACAGCCAAAACT |
| mm4_intron_Dhx34_chr7_16205535 |
CGCTCAGACTTCACCTGGTTGAGGGGCAGACACCTCAGAGTGAGGACCTGGCCAGCTGTGGGAGCAAGCCCCAGCACGGG AGCCTCTGAAGCAGGGCGGGCTGGGGGCCGCTCTAAGGGACCCTCCTA |
| mm3_intron_Kcnh1_chr1_192480188 | TGAGGCTCAAGGCACAAGAGAATTGGGCTTTCTCCCATAGGGAGGGGCAGGAGGCCCACTTAGCACCTAGTG |
| mm3_intergenic_Rpl10-ps3|1600029D21Rik_chr9_50467576 |
AACAAAGCCGTGGAGTGCTACAGTCACCTCTGGGAGGAAGTGGCATTGAACCAGGGACCTGGAAACTGAGAAGCCTTCGA TTCGAGAAGCTGGGG |
| mm4_exon_Zfp770_chr2_114196615 |
TGAGTCTGCTTGGAACTCTGCCACCTCTGGCAGGAAGACACTTGTGTCCATTGAGAATCTGCTCTGACTCAAAACATTCT TCACACTCCGAACACTGAAAAGGGACA |
| mm4_intron_Zfp395_chr14_65374203 |
CAGTGAGCTCATTTGCTGCCGGGGCTGATATGTGCCTTCTCCTCTGGTGGCCCTGCTGTTGGGGGAAGCCCCATCCTGGA TCACTGCCCCAGGGCCCCTTTCCCCTTTCCTGCCACAACCACCCATGCCACTTTG |
| mm4_intron_Ppargc1a_chr5_51552686 |
TATCACTGCACCACACGGACATCTTATTTAATCAAATCACGTGTGGCACTTGACCCTCCCCCTTACCCTACGTGCCCCCG CTACCGGGAGGAAGCACCATTGTTAGTTAGCAGCTCCGATCCTCC |
| mm4_intergenic_Gm22420|Ergic1_chr17_26596249 |
AATACTATCCCCAGGCCCCACCATCCAGCCCCTGTTTGTTGGTTTTAAACCTGTTGGAAGCCCGCCCCTGGCAGGAAGCC ACAAGCATGAGAATCTAGTCCAGGAATAGCGCTCCC |
| mm4_intergenic_Mgat5b|Gm11728_chr11_117026935 |
CCCAAGCCATTGCCCTATGAGGGACAATCTGGGGGAAGATGGGGCTTCCTCACGGGTGAGGTCCTACTGTGACTGTCACA GAGCCCCCGGCCCACTGGTGCTGTTCTGTA |
| mm4_intergenic_H6pd|Gm13067_chr4_150029512 |
ACTGTCTGGTGGGCAGAGAGGAGCCGGCTTCTTTCCCCTCTGGGAGAAAGCACCGAGGGCCACCTGTCACTGTCACCTTT GCCTCTGGCTCTGAACACAAAGCTTCAGGAGTCCAAAGAGTCTTCCACCCTCCCTC |
| mm4_intron_Mark1_chr1_184918115 |
GATGGGTGAGCTCTGTCTCCCAGGGACTTTGTTCCTTCTACTCTGCCCTATGCACTGCTGCTTCCCCTCTGGGAATGTTA CTGACACGCAGCTGAAGGGGCTTCCTGACACAGGCGGATCCCACCTCCACCTCTAGC |
| mm4_intron_Alk_chr17_72275799 |
GCGAAGATGTTTCAACTGGTCCTGAAGATCTGATGAGTAATTCTGTCCAGGAAGATGTGGCTTCCTGACAGACGGGGAAC CTTCCCAGTGATTTAAATACGAGTTTGGATACCAGAGAGTCTGCCGC |
| mm4_intron_Disc1_chr8_125108709 |
CATGAGACCAGGGCCTGATGGCCATGGAATGGGTCTTCTTGCCATAGGGGGCCACTTGAGGAAATCCAGAGTTCTCGCAA TGACTTTCTCTCGCAATGGCATTTTCCC |
| mm4_exon_Ucp2_chr7_100493842 |
AAGGGTTGTTTGTGCCTGGAGGAGCCTTGGAGTTTGTTTGGCCTTTGTTACACTATCTTATGTGGCTGCCTGCCGGAGGT GGAAGTAGGGACACAGGGAGACTGG |
| mm4_intron_Dock8_chr19_25190900 |
CCATCTAGACCGCTGCTGAGTGATGTAGCTTCCTCAGAGAGGAGGAGTCACAGAGCCTGCCCTGGAGACTGTCCATAGAA AGGTGTTGGGAAGGCA |
| mm4_intron_Lsamp_chr16_41661493 | TGGAGTAGGTAGGTGAGCCCCACATTGCTTCCTCCCAGAGGTGAAGAAATCACTGTTGAGGTCAGAGGGGT |
| mm4_intron_Mrpl35_chr6_71823360 |
AGGAGACCAGATACTCGATGCTTTACACACTTGTTTAACCCACAGGTAGGAGGAAGNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNAAGTTGAGAGAGGTGGTTGAACCT |
| mm4_intron_Pde11a_chr2_76003199 |
GAATGGCTGCTGACCCAGAAGCCGCAGGCTTTGATGGATGGGGCTTCGTGGAAGAGGTGGTTGGGACACGTAACTAAAAT GTAGCCACATGGTAATAATCCACCCTTTACACATCGGAGT |
| mm4_intron_Mak_chr13_41052199 |
GGGCAGGATTCAGGAAACCACGAAGCCTTTCCTTGTGAGTCAGCTTTAAGGGGCTTCTTCCCTGAAGTGGGCTCAGGCAC TGGCTTCTGAA |
| mm4_intron_BC030867_chr11_102251721 |
TAAAGGCCTTCCTGGGAGCTGTCTGGAGGGTGATTTCATTCACTTTTATAATAGCATGCCTGAAGGGGGAGGAACGTTTA TAGAGAGCCGCCTCAGGGAGGAGGCCGCACAGTTAGCAGGATGATGTGAGACCCGAGG |
| mm4_intron_Ap2a1_chr7_44922722 |
GGCACAGGGCTTGAGATAGGAGACAGCCCCAGCCTGCAGCTCCCTCTGATAAGGCTTCCCTGCTCAGGGAGGGAGCACCA TGCCTTCACAGAGCCCAGG |
| mm4_intergenic_Rtn4rl1|Rpa1_chr11_75268679 |
AAGGCTGAGCTTTGTCCAGGCTGGACAGTGTGGCCCAGGACATTGGGTGTATTTTTGGAGCTTCCTCCCCCAGGGGGTAG AAGGATCGGAGGCTGATGACA |
| mm4_intergenic_Pex5l|AC113989.1_chr3_33224543 |
CCCTGATTGCTGGGTCTACCTGGAGCACAGACAGAAGAGGTAAACTACATACTGTCCTCTGAACTCTAGGGCTTCCCCCC TGAGGAGGCCTACCTGTCCCCAGGAACATATAGGTTAATCCCTTCCCCACCAATCTGCTG |
| mm4_intergenic_Golga5|Chga_chr12_102552926 |
TGGCAAAGTGAGAATCGGGGTTTAATTCTTACGGGTGATAGTGATGTTACTGGAAGTCCTCTTCAATGCATCCCACCAAG GGGAGGAAGCCCCTTGTGAACTCTGAAACTAGAGGTGGCCTTTGGC |
| mm4_intergenic_A330048O09Rik|Zfp169_chr13_48285474 |
GGAGAAGCCGTTGTTCCTCTGAGCCTGCCGACTCGGGGAGGAACTCCCATGACAGTGTTTCACAGGCTCCTTGATGAAAT GGATACAGTTAAAATAGACCCACACAGATTATTATTGCTGGGAAACTGACACTCC |
| mm4_exon_Lmtk3_chr7_45803873 |
AGATGAGTCCCCTGATCCCCCTGACCCCCCCGACCCCCTTGGAGCCACATGAGGCAGGAAGCCCCATCGCTGGACAGCCA CACGTCTTGGAACTGAACTGAACCGAACTCTTTTGGGCCCAGA |