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Contents:In the table below, Illumina Nextera Handle sequences have been added and highlighted in bold. Primers for the on-target have been added for convenience. The table below is sorted by the CFD off-target score. Sites with very low CFD scores < 0.02 are unlikely to be cleaved, see our study Haeussler et al. 2016, Figure 2.
In the protocol by Matthew Canver, Harvard, two PCRs are run: one PCR to amplify the potential off-target, then a second PCR to extend the handles with Illumina barcodes. Please click here to download the protocol. Alternatively, you can have a look at Fu et al, 2014.
If a primer was not found, the reason is usually that the region around the off-target is too repetitive. To avoid unspecific primers, all repeats are masked for the primer design (not for off-target search). If you think that we should change the parameters here or should use different primer3 settings, please let us know.
Name | Primer Sequence | Tm | CFD Score |
---|---|---|---|
ontarget_mm0_exon_5730457N03Rik/Evx1_chr6_52313594_F | TCGTCGGCAGCGTCCGTCACCAGCGGTACTGTAA | 59.7 | 1.00 |
ontarget_mm0_exon_5730457N03Rik/Evx1_chr6_52313594_R | GTCTCGTGGGCTCGGGGGTCACCTTGTGATGCGA | 60.0 | 1.00 |
mm4_intergenic_Gm24120|Nr2f2_chr7_70309015_F | Primer3: not found at this Tm | N.d. | 0.72 |
mm4_intergenic_Gm24120|Nr2f2_chr7_70309015_R | Primer3: not found at this Tm | N.d. | 0.72 |
mm4_intron_Phactr3_chr2_178183294_F | Primer3: not found at this Tm | N.d. | 0.70 |
mm4_intron_Phactr3_chr2_178183294_R | Primer3: not found at this Tm | N.d. | 0.70 |
mm2_intergenic_Gm14825|4932442L08Rik_chrX_94349572_F | TCGTCGGCAGCGTCGTGTGTCCAGTCACTTACACT | 57.5 | 0.63 |
mm2_intergenic_Gm14825|4932442L08Rik_chrX_94349572_R | GTCTCGTGGGCTCGGTCTCTCACTGGTCTCACAGAC | 58.4 | 0.63 |
mm4_intergenic_Gm23384|Gm11851_chr4_17613202_F | Primer3: not found at this Tm | N.d. | 0.63 |
mm4_intergenic_Gm23384|Gm11851_chr4_17613202_R | Primer3: not found at this Tm | N.d. | 0.63 |
mm2_intergenic_Slc7a11|Gm24503_chr3_50826456_F | TCGTCGGCAGCGTCTCCTCCAAGCTCCCAGAGAA | 59.8 | 0.62 |
mm2_intergenic_Slc7a11|Gm24503_chr3_50826456_R | GTCTCGTGGGCTCGGGCACACTGCATGTTTCTATCCA | 59.2 | 0.62 |
mm3_intergenic_Gm24200|1190002N15Rik_chr9_94382346_F | TCGTCGGCAGCGTCACTGTGTTCTGATTTCTGCCTCA | 60.1 | 0.61 |
mm3_intergenic_Gm24200|1190002N15Rik_chr9_94382346_R | GTCTCGTGGGCTCGGCTAGCACCAGATGGACTGCG | 60.5 | 0.61 |
mm4_intergenic_Cdh6|Gm9630_chr15_13192996_F | Primer3: not found at this Tm | N.d. | 0.61 |
mm4_intergenic_Cdh6|Gm9630_chr15_13192996_R | Primer3: not found at this Tm | N.d. | 0.61 |
mm4_intron_Prkd1_chr12_50413040_F | TCGTCGGCAGCGTCGGAAGCCCAGGTATGCACAT | 60.1 | 0.58 |
mm4_intron_Prkd1_chr12_50413040_R | GTCTCGTGGGCTCGGCATTCACTCACGACCCTCCC | 60.1 | 0.58 |
mm4_intergenic_Fam98a|Gm24126_chr17_75618210_F | TCGTCGGCAGCGTCTGCTGGAAAATGTACCCTAAGTGA | 59.9 | 0.57 |
mm4_intergenic_Fam98a|Gm24126_chr17_75618210_R | GTCTCGTGGGCTCGGACATCCAAAAGGCCTGGGTT | 59.8 | 0.57 |
mm3_intron_Cntnap2_chr6_46916683_F | TCGTCGGCAGCGTCATGTAAGCAGTGTAGGGCCC | 59.4 | 0.54 |
mm3_intron_Cntnap2_chr6_46916683_R | GTCTCGTGGGCTCGGTGCAGGGAATGGAAGCAAGT | 59.8 | 0.54 |
mm4_exon_BC006965_chr11_112664435_F | TCGTCGGCAGCGTCCACAGTCCCTATCCGCTGTC | 59.8 | 0.47 |
mm4_exon_BC006965_chr11_112664435_R | GTCTCGTGGGCTCGGGCCTTGTGAGTCCTATTGGCT | 60.0 | 0.47 |
mm4_intron_AB041803_chr6_31191223_F | Primer3: not found at this Tm | N.d. | 0.45 |
mm4_intron_AB041803_chr6_31191223_R | Primer3: not found at this Tm | N.d. | 0.45 |
mm4_intergenic_Ces1h|Ces5a_chr8_93368515_F | Primer3: not found at this Tm | N.d. | 0.43 |
mm4_intergenic_Ces1h|Ces5a_chr8_93368515_R | Primer3: not found at this Tm | N.d. | 0.43 |
mm4_intergenic_Skap2|Gm15055_chr6_52085133_F | Primer3: not found at this Tm | N.d. | 0.42 |
mm4_intergenic_Skap2|Gm15055_chr6_52085133_R | Primer3: not found at this Tm | N.d. | 0.42 |
mm4_intergenic_P2ry1|B430305J03Rik/Rap2b_chr3_61022111_F | Primer3: not found at this Tm | N.d. | 0.42 |
mm4_intergenic_P2ry1|B430305J03Rik/Rap2b_chr3_61022111_R | Primer3: not found at this Tm | N.d. | 0.42 |
mm3_intron_Vwa8_chr14_79066392_F | TCGTCGGCAGCGTCTTGTGAAGAGCAGCCCTTGG | 60.5 | 0.42 |
mm3_intron_Vwa8_chr14_79066392_R | GTCTCGTGGGCTCGGGCAGCTGTGTCTAGCCCAAT | 60.3 | 0.42 |
mm3_intergenic_2700046A07Rik|Apcdd1_chr18_62871898_F | TCGTCGGCAGCGTCACCTCACCCACAAACCAGAT | 58.8 | 0.41 |
mm3_intergenic_2700046A07Rik|Apcdd1_chr18_62871898_R | GTCTCGTGGGCTCGGGGGGAAGTTAGGAGGCTGGT | 60.9 | 0.41 |
mm4_intergenic_Gm11528|Phb_chr11_95666480_F | TCGTCGGCAGCGTCGACCTGAATGACCGACTCCC | 59.8 | 0.40 |
mm4_intergenic_Gm11528|Phb_chr11_95666480_R | GTCTCGTGGGCTCGGGCACTGAGAGACTGCTAGGG | 59.5 | 0.40 |
mm3_intergenic_Fmn2|Grem2_chr1_174825141_F | TCGTCGGCAGCGTCAGCTGTCCCTTGTTCAACCA | 59.4 | 0.40 |
mm3_intergenic_Fmn2|Grem2_chr1_174825141_R | GTCTCGTGGGCTCGGCCACATTTACACCTACTTAACTGCC | 59.8 | 0.40 |
mm3_intergenic_Barx1|Phf2_chr13_48759864_F | Primer3: not found at this Tm | N.d. | 0.39 |
mm3_intergenic_Barx1|Phf2_chr13_48759864_R | Primer3: not found at this Tm | N.d. | 0.39 |
mm4_intron_Sis_chr3_72911031_F | Primer3: not found at this Tm | N.d. | 0.38 |
mm4_intron_Sis_chr3_72911031_R | Primer3: not found at this Tm | N.d. | 0.38 |
mm3_intergenic_9530036O11Rik|Rnf32_chr5_29138728_F | TCGTCGGCAGCGTCGCATGATGGGTCCCTAGCTC | 59.9 | 0.38 |
mm3_intergenic_9530036O11Rik|Rnf32_chr5_29138728_R | GTCTCGTGGGCTCGGTGTATTGCCTGCTTGAGAAGG | 58.2 | 0.38 |
mm4_intergenic_Fryl|1700071G01Rik_chr5_73152813_F | Primer3: not found at this Tm | N.d. | 0.37 |
mm4_intergenic_Fryl|1700071G01Rik_chr5_73152813_R | Primer3: not found at this Tm | N.d. | 0.37 |
mm3_intergenic_Gm25814|Khdrbs2_chr1_32214583_F | Primer3: not found at this Tm | N.d. | 0.37 |
mm3_intergenic_Gm25814|Khdrbs2_chr1_32214583_R | Primer3: not found at this Tm | N.d. | 0.37 |
mm4_intron_Pcdh9_chr14_93673904_F | Primer3: not found at this Tm | N.d. | 0.37 |
mm4_intron_Pcdh9_chr14_93673904_R | Primer3: not found at this Tm | N.d. | 0.37 |
mm4_intergenic_Gm7792|AC126035.1_chr5_JH584299_random_203454_F | Primer3: not found at this Tm | N.d. | 0.36 |
mm4_intergenic_Gm7792|AC126035.1_chr5_JH584299_random_203454_R | Primer3: not found at this Tm | N.d. | 0.36 |
mm4_intergenic_Gm16513|Gm10424_chr5_95221459_F | Primer3: not found at this Tm | N.d. | 0.36 |
mm4_intergenic_Gm16513|Gm10424_chr5_95221459_R | Primer3: not found at this Tm | N.d. | 0.36 |
mm4_intergenic_Pdia5|Sema5b_chr16_35498052_F | Primer3: not found at this Tm | N.d. | 0.36 |
mm4_intergenic_Pdia5|Sema5b_chr16_35498052_R | Primer3: not found at this Tm | N.d. | 0.36 |
mm4_intergenic_Slc30a10|Lyplal1_chr1_185991950_F | Primer3: not found at this Tm | N.d. | 0.36 |
mm4_intergenic_Slc30a10|Lyplal1_chr1_185991950_R | Primer3: not found at this Tm | N.d. | 0.36 |
mm4_exon_Rasgrf1_chr9_90020297_F | Primer3: not found at this Tm | N.d. | 0.35 |
mm4_exon_Rasgrf1_chr9_90020297_R | Primer3: not found at this Tm | N.d. | 0.35 |
mm4_intergenic_Stim2|Gm24235_chr5_54437492_F | TCGTCGGCAGCGTCCCCACCCCAATCATACATTCCT | 59.8 | 0.35 |
mm4_intergenic_Stim2|Gm24235_chr5_54437492_R | GTCTCGTGGGCTCGGCGTGCACTTTAGCAGTTGGT | 59.0 | 0.35 |
mm4_intron_Ncor1_chr11_62361611_F | Primer3: not found at this Tm | N.d. | 0.34 |
mm4_intron_Ncor1_chr11_62361611_R | Primer3: not found at this Tm | N.d. | 0.34 |
mm4_intergenic_Mtpn|Gm23273_chr6_35748942_F | TCGTCGGCAGCGTCGAGCCCCAAATCTTCCAGGT | 59.6 | 0.33 |
mm4_intergenic_Mtpn|Gm23273_chr6_35748942_R | GTCTCGTGGGCTCGGTCTGCCTAGCACAGAAAGCT | 59.0 | 0.33 |
mm3_intron_Dpy19l3_chr7_35713012_F | Primer3: not found at this Tm | N.d. | 0.33 |
mm3_intron_Dpy19l3_chr7_35713012_R | Primer3: not found at this Tm | N.d. | 0.33 |
mm4_intron_Xylt1_chr7_117527976_F | Primer3: not found at this Tm | N.d. | 0.32 |
mm4_intron_Xylt1_chr7_117527976_R | Primer3: not found at this Tm | N.d. | 0.32 |
mm4_intergenic_Gm9578|Gm22891_chr14_82071353_F | TCGTCGGCAGCGTCTCTTTGGCCATCTCTTGCCT | 59.2 | 0.32 |
mm4_intergenic_Gm9578|Gm22891_chr14_82071353_R | GTCTCGTGGGCTCGGCCCTCCTCCCACCACTTACT | 60.2 | 0.32 |
mm4_intergenic_Robo3|Msantd2_chr9_37459844_F | TCGTCGGCAGCGTCGAACCGGCCCCTAAGTTCTT | 59.6 | 0.31 |
mm4_intergenic_Robo3|Msantd2_chr9_37459844_R | GTCTCGTGGGCTCGGTGAAGCCTGGCTACGTGTAC | 59.7 | 0.31 |
mm4_intron_Ntrk3_chr7_78369908_F | TCGTCGGCAGCGTCACATTGTCCTTCTCAGGTAGTCA | 58.8 | 0.30 |
mm4_intron_Ntrk3_chr7_78369908_R | GTCTCGTGGGCTCGGACCTGTACCCCGAGAAAGGA | 59.8 | 0.30 |
mm4_intergenic_Gm25094|Gm22312_chr6_93410765_F | Primer3: not found at this Tm | N.d. | 0.30 |
mm4_intergenic_Gm25094|Gm22312_chr6_93410765_R | Primer3: not found at this Tm | N.d. | 0.30 |
mm4_intergenic_Gm3756|Arhgap32_chr9_32111940_F | TCGTCGGCAGCGTCTGCCTTTCTCGGAACCTGAA | 59.2 | 0.29 |
mm4_intergenic_Gm3756|Arhgap32_chr9_32111940_R | GTCTCGTGGGCTCGGGCAGCTGCTTCATGATCACG | 59.9 | 0.29 |
mm4_intergenic_Kpna3|Spryd7_chr14_61497870_F | Primer3: not found at this Tm | N.d. | 0.28 |
mm4_intergenic_Kpna3|Spryd7_chr14_61497870_R | Primer3: not found at this Tm | N.d. | 0.28 |
mm3_intergenic_Gm15746|B630019A10Rik_chr16_23214292_F | TCGTCGGCAGCGTCTTGTGTGGCTCATGACAGCT | 59.8 | 0.28 |
mm3_intergenic_Gm15746|B630019A10Rik_chr16_23214292_R | GTCTCGTGGGCTCGGTGGGTCTTGGCCATCTGAAC | 59.9 | 0.28 |
mm4_intron_Pcca_chr14_122640812_F | Primer3: not found at this Tm | N.d. | 0.28 |
mm4_intron_Pcca_chr14_122640812_R | Primer3: not found at this Tm | N.d. | 0.28 |
mm3_intergenic_Ctbp2|Tex36_chr7_133215344_F | Primer3: not found at this Tm | N.d. | 0.28 |
mm3_intergenic_Ctbp2|Tex36_chr7_133215344_R | Primer3: not found at this Tm | N.d. | 0.28 |
mm4_intergenic_Kcnc2|Atxn7l3b/Gm26596_chr10_112875730_F | TCGTCGGCAGCGTCTGTGGACTTTTCTGAGTTCTGGT | 59.8 | 0.27 |
mm4_intergenic_Kcnc2|Atxn7l3b/Gm26596_chr10_112875730_R | GTCTCGTGGGCTCGGTGAGAATGCTAGAATCTCTGGGT | 58.7 | 0.27 |
mm4_intergenic_Parm1|Gm5558_chr5_91640562_F | Primer3: not found at this Tm | N.d. | 0.27 |
mm4_intergenic_Parm1|Gm5558_chr5_91640562_R | Primer3: not found at this Tm | N.d. | 0.27 |
mm4_intergenic_Mmp10|Mmp8_chr9_7520592_F | Primer3: not found at this Tm | N.d. | 0.27 |
mm4_intergenic_Mmp10|Mmp8_chr9_7520592_R | Primer3: not found at this Tm | N.d. | 0.27 |
mm4_intergenic_Nnmt|Zbtb16_chr9_48622227_F | TCGTCGGCAGCGTCTCCTCCTTTTCCTCTCTGCCT | 60.2 | 0.26 |
mm4_intergenic_Nnmt|Zbtb16_chr9_48622227_R | GTCTCGTGGGCTCGGGGAACAGGGAAAGGATTGGGT | 59.9 | 0.26 |
mm4_intergenic_Gm25702|Gm5473_chr15_63502472_F | Primer3: not found at this Tm | N.d. | 0.26 |
mm4_intergenic_Gm25702|Gm5473_chr15_63502472_R | Primer3: not found at this Tm | N.d. | 0.26 |
mm4_intergenic_Trim29|Pvrl1_chr9_43602355_F | TCGTCGGCAGCGTCCTGATGAGGGCCAAAGGGAG | 60.1 | 0.26 |
mm4_intergenic_Trim29|Pvrl1_chr9_43602355_R | GTCTCGTGGGCTCGGGACCAACCAATCAGGAGGCA | 59.9 | 0.26 |
mm4_intergenic_1700029N11Rik|Jarid2_chr13_44521489_F | Primer3: not found at this Tm | N.d. | 0.25 |
mm4_intergenic_1700029N11Rik|Jarid2_chr13_44521489_R | Primer3: not found at this Tm | N.d. | 0.25 |
mm4_intron_4933434I20Rik_chr8_83365788_F | TCGTCGGCAGCGTCGGTGCGCTGTGCTTTAAACA | 59.9 | 0.25 |
mm4_intron_4933434I20Rik_chr8_83365788_R | GTCTCGTGGGCTCGGGCTTGGCTACAGACTAAGGCA | 60.0 | 0.25 |
mm4_intron_Cadm2_chr16_66799343_F | TCGTCGGCAGCGTCTGGCTGTTGTCATATACCACA | 57.0 | 0.24 |
mm4_intron_Cadm2_chr16_66799343_R | GTCTCGTGGGCTCGGGAGGCAGACCCCAAACAGAT | 59.6 | 0.24 |
mm4_intron_Acsl6_chr11_54312981_F | Primer3: not found at this Tm | N.d. | 0.24 |
mm4_intron_Acsl6_chr11_54312981_R | Primer3: not found at this Tm | N.d. | 0.24 |
mm4_intergenic_Gm24246|Pik3c3_chr18_29447814_F | Primer3: not found at this Tm | N.d. | 0.24 |
mm4_intergenic_Gm24246|Pik3c3_chr18_29447814_R | Primer3: not found at this Tm | N.d. | 0.24 |
mm4_intergenic_Aym1|Wscd2_chr5_113470813_F | Primer3: not found at this Tm | N.d. | 0.24 |
mm4_intergenic_Aym1|Wscd2_chr5_113470813_R | Primer3: not found at this Tm | N.d. | 0.24 |
mm4_intergenic_Sec61b|NAMA_1_chr4_47517666_F | Primer3: not found at this Tm | N.d. | 0.24 |
mm4_intergenic_Sec61b|NAMA_1_chr4_47517666_R | Primer3: not found at this Tm | N.d. | 0.24 |
mm4_intron_Acad12_chr5_121615755_F | Primer3: not found at this Tm | N.d. | 0.24 |
mm4_intron_Acad12_chr5_121615755_R | Primer3: not found at this Tm | N.d. | 0.24 |
mm3_intergenic_Gm11845|Tmem64_chr4_15202524_F | Primer3: not found at this Tm | N.d. | 0.23 |
mm3_intergenic_Gm11845|Tmem64_chr4_15202524_R | Primer3: not found at this Tm | N.d. | 0.23 |
mm4_intron_4922502D21Rik_chr6_129330169_F | TCGTCGGCAGCGTCGGCAGGCCATATGCTTAGACT | 59.9 | 0.23 |
mm4_intron_4922502D21Rik_chr6_129330169_R | GTCTCGTGGGCTCGGACTGCTTAATTCAGAAACCTTGAA | 57.0 | 0.23 |
mm4_intron_Ccdc126_chr6_49332401_F | TCGTCGGCAGCGTCTGCCTTCTCTCTCTTCTCCT | 57.0 | 0.23 |
mm4_intron_Ccdc126_chr6_49332401_R | GTCTCGTGGGCTCGGTGGAGAACTGAGAACACGGC | 59.9 | 0.23 |
mm4_intron_Wbp11_chr6_136824443_F | TCGTCGGCAGCGTCGGACCATCATGCGCTGTTTT | 59.4 | 0.23 |
mm4_intron_Wbp11_chr6_136824443_R | GTCTCGTGGGCTCGGACTCTTGAGGCAAAGGAAGGT | 59.2 | 0.23 |
mm4_intron_Gm527_chr12_64918376_F | TCGTCGGCAGCGTCAATGCAGTGTGATCCCTGGG | 60.0 | 0.23 |
mm4_intron_Gm527_chr12_64918376_R | GTCTCGTGGGCTCGGTACTGGGCTGCCTCTTACCT | 59.9 | 0.23 |
mm4_intron_Txnrd3_chr6_89659539_F | TCGTCGGCAGCGTCGACAGAGGCAGGCCATGAC | 60.4 | 0.23 |
mm4_intron_Txnrd3_chr6_89659539_R | GTCTCGTGGGCTCGGATGACATAAGGGCCTGCCTG | 59.8 | 0.23 |
mm4_intron_Agbl4_chr4_111049619_F | Primer3: not found at this Tm | N.d. | 0.23 |
mm4_intron_Agbl4_chr4_111049619_R | Primer3: not found at this Tm | N.d. | 0.23 |
mm4_intergenic_Ube2u|Gm12698_chr4_100524998_F | TCGTCGGCAGCGTCGGACTGCAGATTCCCGAGTC | 60.1 | 0.23 |
mm4_intergenic_Ube2u|Gm12698_chr4_100524998_R | GTCTCGTGGGCTCGGAAATCCTCATGGGTGCAGGG | 60.0 | 0.23 |
mm4_intergenic_Gm24697|Gm11404_chr4_69155771_F | Primer3: not found at this Tm | N.d. | 0.22 |
mm4_intergenic_Gm24697|Gm11404_chr4_69155771_R | Primer3: not found at this Tm | N.d. | 0.22 |
mm4_intron_Fam114a2_chr11_57517436_F | TCGTCGGCAGCGTCGCTGCCTAGTGTTCTCCCTC | 59.8 | 0.22 |
mm4_intron_Fam114a2_chr11_57517436_R | GTCTCGTGGGCTCGGCCCATAGAGTCTAGGCAACACC | 59.8 | 0.22 |
mm4_intergenic_Gm12689|Gm12685_chr4_99310790_F | TCGTCGGCAGCGTCTCAGTGGCTCTTGTTGGCTT | 59.8 | 0.22 |
mm4_intergenic_Gm12689|Gm12685_chr4_99310790_R | GTCTCGTGGGCTCGGGGGCAACTCCACTTGGATGA | 59.9 | 0.22 |
mm4_intergenic_Phlda1|4933440J02Rik_chr10_111571251_F | Primer3: not found at this Tm | N.d. | 0.22 |
mm4_intergenic_Phlda1|4933440J02Rik_chr10_111571251_R | Primer3: not found at this Tm | N.d. | 0.22 |
mm4_intergenic_Gm24398|Xpo1_chr11_23193520_F | Primer3: not found at this Tm | N.d. | 0.22 |
mm4_intergenic_Gm24398|Xpo1_chr11_23193520_R | Primer3: not found at this Tm | N.d. | 0.22 |
mm3_intergenic_Gm16190|Pnpla1_chr17_28867898_F | TCGTCGGCAGCGTCGGGGCCAGGGTAGAGTTCTA | 60.0 | 0.22 |
mm3_intergenic_Gm16190|Pnpla1_chr17_28867898_R | GTCTCGTGGGCTCGGTACCTCAGGGCCATCAGTCC | 60.6 | 0.22 |
mm4_intron_Cnot2_chr10_116496406_F | TCGTCGGCAGCGTCAGAGAAAGTGGGGATGCTGC | 60.0 | 0.22 |
mm4_intron_Cnot2_chr10_116496406_R | GTCTCGTGGGCTCGGTGGAAGCAAACCGTCTCAAA | 57.9 | 0.22 |
mm4_intergenic_Cnih3|Gm16547_chr1_181354746_F | Primer3: not found at this Tm | N.d. | 0.21 |
mm4_intergenic_Cnih3|Gm16547_chr1_181354746_R | Primer3: not found at this Tm | N.d. | 0.21 |
mm4_intron_Clec4a2_chr6_123123051_F | TCGTCGGCAGCGTCTGAACTTTGCCTTCCCCACA | 59.7 | 0.21 |
mm4_intron_Clec4a2_chr6_123123051_R | GTCTCGTGGGCTCGGGTGGACCATTAGCCCTCACC | 60.1 | 0.21 |
mm4_intron_Tgm4_chr9_123046649_F | TCGTCGGCAGCGTCAGACTGTCTTCGTGTGGCTG | 59.9 | 0.21 |
mm4_intron_Tgm4_chr9_123046649_R | GTCTCGTGGGCTCGGTTCAGCTGAGGTGAACCCAC | 59.8 | 0.21 |
mm4_intergenic_Kif7|Plin1_chr7_79718077_F | Primer3: not found at this Tm | N.d. | 0.20 |
mm4_intergenic_Kif7|Plin1_chr7_79718077_R | Primer3: not found at this Tm | N.d. | 0.20 |
mm4_intron_3110047P20Rik_chr5_63796418_F | Primer3: not found at this Tm | N.d. | 0.20 |
mm4_intron_3110047P20Rik_chr5_63796418_R | Primer3: not found at this Tm | N.d. | 0.20 |
mm4_intergenic_Sphkap|Gm6374_chr1_83311124_F | Primer3: not found at this Tm | N.d. | 0.19 |
mm4_intergenic_Sphkap|Gm6374_chr1_83311124_R | Primer3: not found at this Tm | N.d. | 0.19 |
mm3_intron_Thsd7b_chr1_129671360_F | Primer3: not found at this Tm | N.d. | 0.19 |
mm3_intron_Thsd7b_chr1_129671360_R | Primer3: not found at this Tm | N.d. | 0.19 |
mm4_intergenic_Gm26181|Triml1_chr8_42766911_F | Primer3: not found at this Tm | N.d. | 0.19 |
mm4_intergenic_Gm26181|Triml1_chr8_42766911_R | Primer3: not found at this Tm | N.d. | 0.19 |
mm4_intergenic_Gm14005|Gm14010_chr2_128422769_F | Primer3: not found at this Tm | N.d. | 0.19 |
mm4_intergenic_Gm14005|Gm14010_chr2_128422769_R | Primer3: not found at this Tm | N.d. | 0.19 |
mm4_intergenic_Magea2|1700042B14Rik_chrX_155113522_F | Primer3: not found at this Tm | N.d. | 0.19 |
mm4_intergenic_Magea2|1700042B14Rik_chrX_155113522_R | Primer3: not found at this Tm | N.d. | 0.19 |
mm4_intron_Trim38_chr13_23784783_F | TCGTCGGCAGCGTCGGGGAGTAGTTTGACAAGGACA | 59.6 | 0.19 |
mm4_intron_Trim38_chr13_23784783_R | GTCTCGTGGGCTCGGAGGTACAAAGAAAAGGCCAGGA | 59.5 | 0.19 |
mm4_intergenic_Fbxl5|Bst1_chr5_43791450_F | Primer3: not found at this Tm | N.d. | 0.18 |
mm4_intergenic_Fbxl5|Bst1_chr5_43791450_R | Primer3: not found at this Tm | N.d. | 0.18 |
mm4_intron_Il13ra2_chrX_147400250_F | Primer3: not found at this Tm | N.d. | 0.18 |
mm4_intron_Il13ra2_chrX_147400250_R | Primer3: not found at this Tm | N.d. | 0.18 |
mm4_intergenic_F830001A07Rik|Rora_chr9_68874655_F | Primer3: not found at this Tm | N.d. | 0.18 |
mm4_intergenic_F830001A07Rik|Rora_chr9_68874655_R | Primer3: not found at this Tm | N.d. | 0.18 |
mm4_intergenic_mmu-mir-6356|4930546C10Rik_chr18_68869855_F | Primer3: not found at this Tm | N.d. | 0.18 |
mm4_intergenic_mmu-mir-6356|4930546C10Rik_chr18_68869855_R | Primer3: not found at this Tm | N.d. | 0.18 |
mm4_intergenic_Gm25392|Gm24238_chr18_19724354_F | Primer3: not found at this Tm | N.d. | 0.18 |
mm4_intergenic_Gm25392|Gm24238_chr18_19724354_R | Primer3: not found at this Tm | N.d. | 0.18 |
mm4_intergenic_Gm23752|Gm24815_chr12_7286213_F | TCGTCGGCAGCGTCGCTCATGGTCTACAATTGTGCC | 59.9 | 0.18 |
mm4_intergenic_Gm23752|Gm24815_chr12_7286213_R | GTCTCGTGGGCTCGGTGTTAATTCTGCTTGGTAGTGATGG | 59.3 | 0.18 |
mm4_intron_Acsl1_chr8_46476564_F | Primer3: not found at this Tm | N.d. | 0.17 |
mm4_intron_Acsl1_chr8_46476564_R | Primer3: not found at this Tm | N.d. | 0.17 |
mm4_intergenic_Gm5839|Gm25440_chr18_48995152_F | TCGTCGGCAGCGTCTGTGTGCCTATAGCCGAGAG | 58.9 | 0.17 |
mm4_intergenic_Gm5839|Gm25440_chr18_48995152_R | GTCTCGTGGGCTCGGTCGAAGATACTGGATGATCAAGGT | 59.1 | 0.17 |
mm4_intergenic_A930031H19Rik|Gm25261_chr4_131144431_F | TCGTCGGCAGCGTCCTCTCCTCCTCCCGCTAAGA | 59.8 | 0.17 |
mm4_intergenic_A930031H19Rik|Gm25261_chr4_131144431_R | GTCTCGTGGGCTCGGAGGGGAGATCTTAGTGGGGA | 58.6 | 0.17 |
mm4_intron_Gabrb1_chr5_71862817_F | TCGTCGGCAGCGTCTGAGTGAAGAGAGCTTGGGA | 57.9 | 0.17 |
mm4_intron_Gabrb1_chr5_71862817_R | GTCTCGTGGGCTCGGCCCTCTCTATGATGTGGCACA | 59.2 | 0.17 |
mm4_intergenic_Gm6634|Gm8604_chr3_71208907_F | Primer3: not found at this Tm | N.d. | 0.17 |
mm4_intergenic_Gm6634|Gm8604_chr3_71208907_R | Primer3: not found at this Tm | N.d. | 0.17 |
mm4_intron_Fzr1_chr10_81376993_F | TCGTCGGCAGCGTCCCATGAGAGCTAGAGCCACC | 59.6 | 0.17 |
mm4_intron_Fzr1_chr10_81376993_R | GTCTCGTGGGCTCGGCCCAGTCCTAGCTCCTTCCT | 60.0 | 0.17 |
mm4_intron_Agps_chr2_75870271_F | Primer3: not found at this Tm | N.d. | 0.17 |
mm4_intron_Agps_chr2_75870271_R | Primer3: not found at this Tm | N.d. | 0.17 |
mm4_intergenic_Gm11820|Gm26250_chr4_13247129_F | Primer3: not found at this Tm | N.d. | 0.17 |
mm4_intergenic_Gm11820|Gm26250_chr4_13247129_R | Primer3: not found at this Tm | N.d. | 0.17 |
mm4_intron_Sil1_chr18_35347122_F | Primer3: not found at this Tm | N.d. | 0.17 |
mm4_intron_Sil1_chr18_35347122_R | Primer3: not found at this Tm | N.d. | 0.17 |
mm4_intergenic_Gm23987|Fam135b_chr15_70438359_F | Primer3: not found at this Tm | N.d. | 0.16 |
mm4_intergenic_Gm23987|Fam135b_chr15_70438359_R | Primer3: not found at this Tm | N.d. | 0.16 |
mm4_intergenic_St8sia6|Ptpla_chr2_13838813_F | Primer3: not found at this Tm | N.d. | 0.16 |
mm4_intergenic_St8sia6|Ptpla_chr2_13838813_R | Primer3: not found at this Tm | N.d. | 0.16 |
mm4_intergenic_Gm25454|n-R5s165_chr6_112145971_F | Primer3: not found at this Tm | N.d. | 0.16 |
mm4_intergenic_Gm25454|n-R5s165_chr6_112145971_R | Primer3: not found at this Tm | N.d. | 0.16 |
mm4_intron_Moxd1_chr10_24238180_F | Primer3: not found at this Tm | N.d. | 0.16 |
mm4_intron_Moxd1_chr10_24238180_R | Primer3: not found at this Tm | N.d. | 0.16 |
mm4_intergenic_Npy1r|Naf1_chr8_66752032_F | Primer3: not found at this Tm | N.d. | 0.15 |
mm4_intergenic_Npy1r|Naf1_chr8_66752032_R | Primer3: not found at this Tm | N.d. | 0.15 |
mm4_intron_Rps6ka2_chr17_7286131_F | Primer3: not found at this Tm | N.d. | 0.15 |
mm4_intron_Rps6ka2_chr17_7286131_R | Primer3: not found at this Tm | N.d. | 0.15 |
mm4_intergenic_Gm21614|Gm23249_chr12_93328482_F | TCGTCGGCAGCGTCAAGGGGATCATCTCGTTGCA | 59.0 | 0.15 |
mm4_intergenic_Gm21614|Gm23249_chr12_93328482_R | GTCTCGTGGGCTCGGAGTGATAAACCAAAGCCCAAATT | 57.1 | 0.15 |
mm4_intron_Psma6_chr12_55411816_F | Primer3: not found at this Tm | N.d. | 0.15 |
mm4_intron_Psma6_chr12_55411816_R | Primer3: not found at this Tm | N.d. | 0.15 |
mm4_intron_Degs1_chr1_182277750_F | TCGTCGGCAGCGTCGGGACTGTGTAATAAATGCCAGG | 59.3 | 0.15 |
mm4_intron_Degs1_chr1_182277750_R | GTCTCGTGGGCTCGGTCCCCTGGGTTACGTCGATA | 59.7 | 0.15 |
mm4_intron_Fhad1_chr4_141902226_F | Primer3: not found at this Tm | N.d. | 0.14 |
mm4_intron_Fhad1_chr4_141902226_R | Primer3: not found at this Tm | N.d. | 0.14 |
mm4_intron_Gm12114_chr11_33071986_F | Primer3: not found at this Tm | N.d. | 0.14 |
mm4_intron_Gm12114_chr11_33071986_R | Primer3: not found at this Tm | N.d. | 0.14 |
mm4_intron_Il24_chr1_130882788_F | TCGTCGGCAGCGTCCAGGGTGAGGACAAAGAGGC | 60.3 | 0.14 |
mm4_intron_Il24_chr1_130882788_R | GTCTCGTGGGCTCGGGGCTCATGTCAGCTCAGTGA | 59.7 | 0.14 |
mm4_intron_Ago2_chr15_73167071_F | Primer3: not found at this Tm | N.d. | 0.14 |
mm4_intron_Ago2_chr15_73167071_R | Primer3: not found at this Tm | N.d. | 0.14 |
mm4_exon_Rragd_chr4_33013030_F | TCGTCGGCAGCGTCAAGTTCTTGGCGCTCGTTTG | 59.6 | 0.14 |
mm4_exon_Rragd_chr4_33013030_R | GTCTCGTGGGCTCGGTCAACAGGCGACAGATGCAA | 60.2 | 0.14 |
mm4_intron_Pde4b_chr4_102502920_F | TCGTCGGCAGCGTCACCAAGACTGAGCACCAAGG | 59.8 | 0.14 |
mm4_intron_Pde4b_chr4_102502920_R | GTCTCGTGGGCTCGGGGGAAGCTCTCTGCACACTA | 59.1 | 0.14 |
mm4_intron_Prep_chr10_45088702_F | Primer3: not found at this Tm | N.d. | 0.14 |
mm4_intron_Prep_chr10_45088702_R | Primer3: not found at this Tm | N.d. | 0.14 |
mm4_intergenic_Gm14082|Gm11644_chr2_143341488_F | Primer3: not found at this Tm | N.d. | 0.14 |
mm4_intergenic_Gm14082|Gm11644_chr2_143341488_R | Primer3: not found at this Tm | N.d. | 0.14 |
mm4_intron_Cyp4a29-ps_chr4_115252040_F | Primer3: not found at this Tm | N.d. | 0.14 |
mm4_intron_Cyp4a29-ps_chr4_115252040_R | Primer3: not found at this Tm | N.d. | 0.14 |
mm4_intron_Cyp4a28-ps_chr4_115141109_F | Primer3: not found at this Tm | N.d. | 0.14 |
mm4_intron_Cyp4a28-ps_chr4_115141109_R | Primer3: not found at this Tm | N.d. | 0.14 |
mm3_intron_Dnm3_chr1_162369992_F | TCGTCGGCAGCGTCCCTGCTCCTCACTTCCCATG | 60.1 | 0.14 |
mm3_intron_Dnm3_chr1_162369992_R | GTCTCGTGGGCTCGGACGAGGACATAGGCCTCCTT | 60.0 | 0.14 |
mm3_intergenic_Sh3gl2|Gm12680_chr4_85402700_F | Primer3: not found at this Tm | N.d. | 0.14 |
mm3_intergenic_Sh3gl2|Gm12680_chr4_85402700_R | Primer3: not found at this Tm | N.d. | 0.14 |
mm4_intergenic_Gm15975|Gm23896_chr5_56683708_F | Primer3: not found at this Tm | N.d. | 0.13 |
mm4_intergenic_Gm15975|Gm23896_chr5_56683708_R | Primer3: not found at this Tm | N.d. | 0.13 |
mm4_intron_Chuk_chr19_44093008_F | TCGTCGGCAGCGTCGTATGTTGGGTGGTGGGGAG | 60.0 | 0.13 |
mm4_intron_Chuk_chr19_44093008_R | GTCTCGTGGGCTCGGTCCTTGGTGTGTAAGCGGTG | 60.2 | 0.13 |
mm4_intergenic_Irx2|Irx4_chr13_73208295_F | Primer3: not found at this Tm | N.d. | 0.13 |
mm4_intergenic_Irx2|Irx4_chr13_73208295_R | Primer3: not found at this Tm | N.d. | 0.13 |
mm4_intergenic_Gm13921|Ldlrad3_chr2_102177275_F | Primer3: not found at this Tm | N.d. | 0.13 |
mm4_intergenic_Gm13921|Ldlrad3_chr2_102177275_R | Primer3: not found at this Tm | N.d. | 0.13 |
mm4_intergenic_C230035I16Rik|Btn1a1_chr13_23455848_F | Primer3: not found at this Tm | N.d. | 0.13 |
mm4_intergenic_C230035I16Rik|Btn1a1_chr13_23455848_R | Primer3: not found at this Tm | N.d. | 0.13 |
mm4_intron_RP23-394M5.2_chr8_87372482_F | Primer3: not found at this Tm | N.d. | 0.13 |
mm4_intron_RP23-394M5.2_chr8_87372482_R | Primer3: not found at this Tm | N.d. | 0.13 |
mm4_intergenic_Sh3tc1|Ablim2_chr5_35757032_F | TCGTCGGCAGCGTCCTGTGCCTGTTCATGCAGTG | 59.7 | 0.13 |
mm4_intergenic_Sh3tc1|Ablim2_chr5_35757032_R | GTCTCGTGGGCTCGGGATCCTGCCTCGTATCGGTG | 60.0 | 0.13 |
mm4_intergenic_Ccdc147|Sorcs3_chr19_48037966_F | Primer3: not found at this Tm | N.d. | 0.13 |
mm4_intergenic_Ccdc147|Sorcs3_chr19_48037966_R | Primer3: not found at this Tm | N.d. | 0.13 |
mm4_intergenic_Cgnl1|RP23-79K5.1_chr9_71792199_F | Primer3: not found at this Tm | N.d. | 0.13 |
mm4_intergenic_Cgnl1|RP23-79K5.1_chr9_71792199_R | Primer3: not found at this Tm | N.d. | 0.13 |
mm4_intron_Gabra1_chr11_42165381_F | Primer3: not found at this Tm | N.d. | 0.13 |
mm4_intron_Gabra1_chr11_42165381_R | Primer3: not found at this Tm | N.d. | 0.13 |
mm4_intergenic_Ccnd1|Tpcn2_chr7_145109620_F | TCGTCGGCAGCGTCAGCTGGTGGTAAGGAAAGCC | 59.9 | 0.13 |
mm4_intergenic_Ccnd1|Tpcn2_chr7_145109620_R | GTCTCGTGGGCTCGGTACCTTCTACCTGGCCTCCC | 60.0 | 0.13 |
mm4_intergenic_Gm26937|Lipi_chr16_75112005_F | Primer3: not found at this Tm | N.d. | 0.12 |
mm4_intergenic_Gm26937|Lipi_chr16_75112005_R | Primer3: not found at this Tm | N.d. | 0.12 |
mm3_intergenic_Bmf|Gm14016_chr2_118582427_F | Primer3: not found at this Tm | N.d. | 0.12 |
mm3_intergenic_Bmf|Gm14016_chr2_118582427_R | Primer3: not found at this Tm | N.d. | 0.12 |
mm4_exon_Cyp2b19_chr7_26759325_F | TCGTCGGCAGCGTCTCCAATGTGACCCAACCACC | 60.1 | 0.12 |
mm4_exon_Cyp2b19_chr7_26759325_R | GTCTCGTGGGCTCGGTCTCATGGTGGCCAGAGAGA | 59.9 | 0.12 |
mm4_intergenic_Idh2|Sema4b_chr7_80182402_F | TCGTCGGCAGCGTCCCTGTCAAGGGCCAATACTACT | 59.4 | 0.12 |
mm4_intergenic_Idh2|Sema4b_chr7_80182402_R | GTCTCGTGGGCTCGGGGAGAAGGGTGTGACAGAGC | 60.0 | 0.12 |
mm2_intergenic_Gm14514|Efhc2_chrX_17259623_F | Primer3: not found at this Tm | N.d. | 0.12 |
mm2_intergenic_Gm14514|Efhc2_chrX_17259623_R | Primer3: not found at this Tm | N.d. | 0.12 |
mm4_intergenic_Gm11077|Pde3a_chr6_141048792_F | TCGTCGGCAGCGTCTCTGTGACCTGTCGACTAGA | 57.1 | 0.12 |
mm4_intergenic_Gm11077|Pde3a_chr6_141048792_R | GTCTCGTGGGCTCGGCATGTTCCCCTCCAGGCTC | 59.7 | 0.12 |
mm4_intergenic_Atp6v1h|Oprk1_chr1_5312857_F | Primer3: not found at this Tm | N.d. | 0.12 |
mm4_intergenic_Atp6v1h|Oprk1_chr1_5312857_R | Primer3: not found at this Tm | N.d. | 0.12 |
mm4_intergenic_Rngtt|Gm12398_chr4_33594839_F | TCGTCGGCAGCGTCAAAGCTCTTAGAGGCCGCTG | 60.1 | 0.12 |
mm4_intergenic_Rngtt|Gm12398_chr4_33594839_R | GTCTCGTGGGCTCGGTCTGTGTGTCCCTGCTCTCT | 60.1 | 0.12 |
mm4_intergenic_Fam189a1|Ndnl2_chr7_64863107_F | Primer3: not found at this Tm | N.d. | 0.11 |
mm4_intergenic_Fam189a1|Ndnl2_chr7_64863107_R | Primer3: not found at this Tm | N.d. | 0.11 |
mm4_intron_Map2k6_chr11_110485237_F | TCGTCGGCAGCGTCGGCATGCTTGTTCTGAGTCAC | 59.8 | 0.11 |
mm4_intron_Map2k6_chr11_110485237_R | GTCTCGTGGGCTCGGACCAAGTGACTTGTCAAGGTT | 57.6 | 0.11 |
mm4_intergenic_Gm26087|Gm12388_chr4_40009790_F | Primer3: not found at this Tm | N.d. | 0.11 |
mm4_intergenic_Gm26087|Gm12388_chr4_40009790_R | Primer3: not found at this Tm | N.d. | 0.11 |
mm4_intergenic_Epha4|Gm26263_chr1_77776846_F | Primer3: not found at this Tm | N.d. | 0.11 |
mm4_intergenic_Epha4|Gm26263_chr1_77776846_R | Primer3: not found at this Tm | N.d. | 0.11 |
mm4_intergenic_Gm9257|Gm22189_chr12_19811716_F | Primer3: not found at this Tm | N.d. | 0.11 |
mm4_intergenic_Gm9257|Gm22189_chr12_19811716_R | Primer3: not found at this Tm | N.d. | 0.11 |
mm3_intergenic_Gm26674/Sash1|Gm9930_chr10_9355263_F | TCGTCGGCAGCGTCCTGAGAGCCTGCATCAAGGA | 59.4 | 0.11 |
mm3_intergenic_Gm26674/Sash1|Gm9930_chr10_9355263_R | GTCTCGTGGGCTCGGAGAGCACACAGTCCTGCTTG | 60.2 | 0.11 |
mm4_intergenic_Gm11890|Gm11892_chr4_23995007_F | Primer3: not found at this Tm | N.d. | 0.11 |
mm4_intergenic_Gm11890|Gm11892_chr4_23995007_R | Primer3: not found at this Tm | N.d. | 0.11 |
mm4_intergenic_Abca5|Map2k6_chr11_110347594_F | TCGTCGGCAGCGTCGCAACTACAAGCCGCACAAT | 59.7 | 0.11 |
mm4_intergenic_Abca5|Map2k6_chr11_110347594_R | GTCTCGTGGGCTCGGAGGCAAGATCTCTTTGAGTTTGG | 58.9 | 0.11 |
mm4_intergenic_Wnt4|Cdc42_chr4_137301664_F | TCGTCGGCAGCGTCTGACAGGGGAGGAGAGAAGG | 59.9 | 0.11 |
mm4_intergenic_Wnt4|Cdc42_chr4_137301664_R | GTCTCGTGGGCTCGGGCTAATTGCCTCCGAAGTGC | 59.6 | 0.11 |
mm4_intergenic_Gm23558|Galc_chr12_97455536_F | TCGTCGGCAGCGTCTGTGGGACAGATGGGGAAGA | 60.1 | 0.11 |
mm4_intergenic_Gm23558|Galc_chr12_97455536_R | GTCTCGTGGGCTCGGCACACTCTGTGCCCATCAAA | 58.3 | 0.11 |
mm4_intron_Rell1_chr5_63931832_F | Primer3: not found at this Tm | N.d. | 0.11 |
mm4_intron_Rell1_chr5_63931832_R | Primer3: not found at this Tm | N.d. | 0.11 |
mm4_intergenic_App|Cyyr1_chr16_85198316_F | TCGTCGGCAGCGTCGCCATTCCTCCCACAACCTT | 60.2 | 0.11 |
mm4_intergenic_App|Cyyr1_chr16_85198316_R | GTCTCGTGGGCTCGGTTATTGAGGGAGTGCCTCGC | 59.8 | 0.11 |
mm4_intron_Egfem1_chr3_29211271_F | TCGTCGGCAGCGTCTGGCCTTTTCTAGGTTTAGATCA | 57.2 | 0.11 |
mm4_intron_Egfem1_chr3_29211271_R | GTCTCGTGGGCTCGGAGGATCATATGAGAACCCACAGG | 59.3 | 0.11 |
mm4_intergenic_Gm5976|Tmem194b_chr1_52520336_F | Primer3: not found at this Tm | N.d. | 0.11 |
mm4_intergenic_Gm5976|Tmem194b_chr1_52520336_R | Primer3: not found at this Tm | N.d. | 0.11 |
mm4_exon_Tbc1d9b_chr11_50168203_F | TCGTCGGCAGCGTCTGTGGAAGCACTGCTACAGG | 59.9 | 0.10 |
mm4_exon_Tbc1d9b_chr11_50168203_R | GTCTCGTGGGCTCGGTAACAAGCAAGGGTGGGCAC | 60.8 | 0.10 |
mm4_intron_Fgfr2_chr7_130226625_F | TCGTCGGCAGCGTCGTCCGTCAGTCTGGGAGATG | 59.5 | 0.10 |
mm4_intron_Fgfr2_chr7_130226625_R | GTCTCGTGGGCTCGGAGACAGTGGCATTGCAAGGT | 60.1 | 0.10 |
mm4_intron_Nr3c2_chr8_77241233_F | TCGTCGGCAGCGTCCTCCAGTGAGGGTCCAGTGA | 60.5 | 0.10 |
mm4_intron_Nr3c2_chr8_77241233_R | GTCTCGTGGGCTCGGAAGGACCAAGCATCCGTGAG | 60.0 | 0.10 |
mm4_intergenic_Vmn1r202|Gm11300/Vmn1r203_chr13_22502460_F | TCGTCGGCAGCGTCAATTGGACATGAGCACCGTG | 58.8 | 0.10 |
mm4_intergenic_Vmn1r202|Gm11300/Vmn1r203_chr13_22502460_R | GTCTCGTGGGCTCGGTCATGGCTTGGAAACTGAATGA | 58.2 | 0.10 |
mm4_intergenic_Vmn1r-ps116|Gm23774_chr13_22875430_F | Primer3: not found at this Tm | N.d. | 0.10 |
mm4_intergenic_Vmn1r-ps116|Gm23774_chr13_22875430_R | Primer3: not found at this Tm | N.d. | 0.10 |
mm4_intergenic_4921524J17Rik/1700051O22Rik|Gpt2_chr8_85462662_F | Primer3: not found at this Tm | N.d. | 0.10 |
mm4_intergenic_4921524J17Rik/1700051O22Rik|Gpt2_chr8_85462662_R | Primer3: not found at this Tm | N.d. | 0.10 |
mm4_intergenic_Gm15387|Bai1_chr15_74300684_F | Primer3: not found at this Tm | N.d. | 0.10 |
mm4_intergenic_Gm15387|Bai1_chr15_74300684_R | Primer3: not found at this Tm | N.d. | 0.10 |
mm4_intergenic_Gm11681|4933434M16Rik_chr11_112800781_F | TCGTCGGCAGCGTCTGCCAATAACACACCCTCCC | 59.9 | 0.10 |
mm4_intergenic_Gm11681|4933434M16Rik_chr11_112800781_R | GTCTCGTGGGCTCGGTCATGTGATTCTCAGCTAGCGT | 59.5 | 0.10 |
mm4_intergenic_Hs1bp3|Rhob_chr12_8389466_F | TCGTCGGCAGCGTCTTAGCCCAATCCCCTCATGC | 59.8 | 0.10 |
mm4_intergenic_Hs1bp3|Rhob_chr12_8389466_R | GTCTCGTGGGCTCGGCCCAGGTCAAAGCACCAGAT | 59.9 | 0.10 |
mm4_exon_Egflam_chr15_7316474_F | TCGTCGGCAGCGTCCGCAGGGACTTATCTGAACCA | 59.7 | 0.10 |
mm4_exon_Egflam_chr15_7316474_R | GTCTCGTGGGCTCGGACCACCATAGCCACACCATT | 59.2 | 0.10 |
mm4_intergenic_Osmr|Lifr_chr15_6982345_F | Primer3: not found at this Tm | N.d. | 0.10 |
mm4_intergenic_Osmr|Lifr_chr15_6982345_R | Primer3: not found at this Tm | N.d. | 0.10 |
mm4_intron_Sgms1_chr19_32136134_F | TCGTCGGCAGCGTCAGCATAACCACTGAGGACTGA | 58.4 | 0.10 |
mm4_intron_Sgms1_chr19_32136134_R | GTCTCGTGGGCTCGGTCTCCCTCTGGCTGTGTCAT | 60.2 | 0.10 |
mm4_intron_Tmod2_chr9_75610122_F | Primer3: not found at this Tm | N.d. | 0.09 |
mm4_intron_Tmod2_chr9_75610122_R | Primer3: not found at this Tm | N.d. | 0.09 |
mm3_intergenic_Gm5828|Jph1_chr1_16814262_F | Primer3: not found at this Tm | N.d. | 0.09 |
mm3_intergenic_Gm5828|Jph1_chr1_16814262_R | Primer3: not found at this Tm | N.d. | 0.09 |
mm4_intron_Kcnip4_chr5_48839408_F | Primer3: not found at this Tm | N.d. | 0.09 |
mm4_intron_Kcnip4_chr5_48839408_R | Primer3: not found at this Tm | N.d. | 0.09 |
mm4_intergenic_Gm25602|Tbc1d32_chr10_54916575_F | Primer3: not found at this Tm | N.d. | 0.09 |
mm4_intergenic_Gm25602|Tbc1d32_chr10_54916575_R | Primer3: not found at this Tm | N.d. | 0.09 |
mm4_intergenic_Gm14979|Gm22552_chrX_133237438_F | Primer3: not found at this Tm | N.d. | 0.09 |
mm4_intergenic_Gm14979|Gm22552_chrX_133237438_R | Primer3: not found at this Tm | N.d. | 0.09 |
mm4_intergenic_Pced1b|Rpap3_chr15_97591440_F | TCGTCGGCAGCGTCCCAGCGTTAAGGAGAGGCAA | 60.0 | 0.09 |
mm4_intergenic_Pced1b|Rpap3_chr15_97591440_R | GTCTCGTGGGCTCGGCTCTGAGCCTTCTTGTGCCA | 59.9 | 0.09 |
mm4_intron_Ift172_chr5_31274292_F | Primer3: not found at this Tm | N.d. | 0.09 |
mm4_intron_Ift172_chr5_31274292_R | Primer3: not found at this Tm | N.d. | 0.09 |
mm3_intron_Rftn1_chr17_50117690_F | TCGTCGGCAGCGTCGACCTGCCTGACACTCAACA | 59.8 | 0.09 |
mm3_intron_Rftn1_chr17_50117690_R | GTCTCGTGGGCTCGGGATAGGGAGGGAGGGGACAG | 60.1 | 0.09 |
mm4_intergenic_Gm9931|Gm22966_chr1_147771121_F | TCGTCGGCAGCGTCGAGCAAAGCACAGAGGACCA | 60.2 | 0.09 |
mm4_intergenic_Gm9931|Gm22966_chr1_147771121_R | GTCTCGTGGGCTCGGACTGATGTCTGATTGGGGTCT | 58.4 | 0.09 |
mm3_intergenic_Mapk4/Gm9925|Ska1_chr18_74092406_F | Primer3: not found at this Tm | N.d. | 0.09 |
mm3_intergenic_Mapk4/Gm9925|Ska1_chr18_74092406_R | Primer3: not found at this Tm | N.d. | 0.09 |
mm4_intron_Lmna_chr3_88487775_F | TCGTCGGCAGCGTCTGAGCAGCATGAGAGAGCAG | 59.8 | 0.09 |
mm4_intron_Lmna_chr3_88487775_R | GTCTCGTGGGCTCGGTACCTAGGTGTGCTGCCTGT | 60.5 | 0.09 |
mm4_intron_Hs6st3_chr14_119437068_F | TCGTCGGCAGCGTCTCTGCTTGTCTGGAGATATGCT | 58.9 | 0.08 |
mm4_intron_Hs6st3_chr14_119437068_R | GTCTCGTGGGCTCGGTCATGCAAAGGTAAGGGCTT | 57.3 | 0.08 |
mm4_intron_Myt1l_chr12_29830820_F | Primer3: not found at this Tm | N.d. | 0.08 |
mm4_intron_Myt1l_chr12_29830820_R | Primer3: not found at this Tm | N.d. | 0.08 |
mm4_intergenic_Gm22536|Gm6632_chr5_58748406_F | Primer3: not found at this Tm | N.d. | 0.08 |
mm4_intergenic_Gm22536|Gm6632_chr5_58748406_R | Primer3: not found at this Tm | N.d. | 0.08 |
mm4_intergenic_Zfp217|Gm17619_chr2_170171745_F | TCGTCGGCAGCGTCGCTAGCTAGCCTGACGTGG | 59.9 | 0.08 |
mm4_intergenic_Zfp217|Gm17619_chr2_170171745_R | GTCTCGTGGGCTCGGGTCAATGGACACCATCTTACATGG | 59.6 | 0.08 |
mm4_intergenic_Olfr1487|Olfr1489_chr19_13620384_F | Primer3: not found at this Tm | N.d. | 0.08 |
mm4_intergenic_Olfr1487|Olfr1489_chr19_13620384_R | Primer3: not found at this Tm | N.d. | 0.08 |
mm4_intron_Fstl1_chr16_37828075_F | Primer3: not found at this Tm | N.d. | 0.08 |
mm4_intron_Fstl1_chr16_37828075_R | Primer3: not found at this Tm | N.d. | 0.08 |
mm4_intron_Mtdh_chr15_34127305_F | Primer3: not found at this Tm | N.d. | 0.08 |
mm4_intron_Mtdh_chr15_34127305_R | Primer3: not found at this Tm | N.d. | 0.08 |
mm3_intron_Clstn2_chr9_97484615_F | TCGTCGGCAGCGTCGCTCTGTTTTGCCCTTCCCT | 60.5 | 0.08 |
mm3_intron_Clstn2_chr9_97484615_R | GTCTCGTGGGCTCGGCTTTTGCACCACTGGAACCG | 59.9 | 0.08 |
mm4_intergenic_Gm23794|Nhs_chrX_162152400_F | Primer3: not found at this Tm | N.d. | 0.08 |
mm4_intergenic_Gm23794|Nhs_chrX_162152400_R | Primer3: not found at this Tm | N.d. | 0.08 |
mm4_intron_Ryr3_chr2_112872913_F | Primer3: not found at this Tm | N.d. | 0.08 |
mm4_intron_Ryr3_chr2_112872913_R | Primer3: not found at this Tm | N.d. | 0.08 |
mm4_intergenic_Slc30a10|Lyplal1_chr1_186006714_F | Primer3: not found at this Tm | N.d. | 0.08 |
mm4_intergenic_Slc30a10|Lyplal1_chr1_186006714_R | Primer3: not found at this Tm | N.d. | 0.08 |
mm4_intergenic_Gm14453|Rbm38/Gm14453_chr2_173028054_F | TCGTCGGCAGCGTCTAATGGATGGCCTTGGCCTT | 59.3 | 0.08 |
mm4_intergenic_Gm14453|Rbm38/Gm14453_chr2_173028054_R | GTCTCGTGGGCTCGGCCCACCTGAACCTGCCTAAA | 59.5 | 0.08 |
mm4_exon_Grid1_chr14_34822537_F | Primer3: not found at this Tm | N.d. | 0.08 |
mm4_exon_Grid1_chr14_34822537_R | Primer3: not found at this Tm | N.d. | 0.08 |
mm4_intergenic_Fnip1|Gm24198_chr11_54451522_F | Primer3: not found at this Tm | N.d. | 0.08 |
mm4_intergenic_Fnip1|Gm24198_chr11_54451522_R | Primer3: not found at this Tm | N.d. | 0.08 |
mm4_intergenic_Gm22825|Zfhx3_chr8_108436288_F | Primer3: not found at this Tm | N.d. | 0.08 |
mm4_intergenic_Gm22825|Zfhx3_chr8_108436288_R | Primer3: not found at this Tm | N.d. | 0.08 |
mm4_intron_Tceal3_chrX_136641913_F | TCGTCGGCAGCGTCCGTCCTGTGCACATTTTCCC | 59.7 | 0.08 |
mm4_intron_Tceal3_chrX_136641913_R | GTCTCGTGGGCTCGGCCTCAGGTCTTGACAAGGCA | 59.6 | 0.08 |
mm4_intron_Fut10_chr8_31195498_F | Primer3: not found at this Tm | N.d. | 0.08 |
mm4_intron_Fut10_chr8_31195498_R | Primer3: not found at this Tm | N.d. | 0.08 |
mm4_intergenic_Gm13529|9430024E24Rik_chr2_33679589_F | TCGTCGGCAGCGTCCTGTGCCCCAGAGAGGACT | 60.6 | 0.07 |
mm4_intergenic_Gm13529|9430024E24Rik_chr2_33679589_R | GTCTCGTGGGCTCGGTTCATGACAGCAGAGGCAGG | 60.0 | 0.07 |
mm4_intron_Smg6_chr11_74973363_F | TCGTCGGCAGCGTCGCGCTCACGAGAACCTTTTG | 60.1 | 0.07 |
mm4_intron_Smg6_chr11_74973363_R | GTCTCGTGGGCTCGGGTCTGGGAACTCTCATGCCC | 60.1 | 0.07 |
mm4_intron_Dmd_chrX_85070940_F | TCGTCGGCAGCGTCTGTTCTGTTCATTGATGCCATC | 57.2 | 0.07 |
mm4_intron_Dmd_chrX_85070940_R | GTCTCGTGGGCTCGGACAGGCCCCAAGATCATTTT | 57.3 | 0.07 |
mm4_intron_Tceal3_chrX_136620256_F | Primer3: not found at this Tm | N.d. | 0.07 |
mm4_intron_Tceal3_chrX_136620256_R | Primer3: not found at this Tm | N.d. | 0.07 |
mm4_intergenic_Coro1c|Gm22056_chr5_113911989_F | Primer3: not found at this Tm | N.d. | 0.07 |
mm4_intergenic_Coro1c|Gm22056_chr5_113911989_R | Primer3: not found at this Tm | N.d. | 0.07 |
mm4_intergenic_Gm12418|Gm12419_chr4_84920728_F | Primer3: not found at this Tm | N.d. | 0.07 |
mm4_intergenic_Gm12418|Gm12419_chr4_84920728_R | Primer3: not found at this Tm | N.d. | 0.07 |
mm4_intergenic_Fat4|Gm9845_chr3_39270164_F | TCGTCGGCAGCGTCTGTCAGAGGAAAACAGTAGCAGA | 59.3 | 0.07 |
mm4_intergenic_Fat4|Gm9845_chr3_39270164_R | GTCTCGTGGGCTCGGGGTTTCCTTTTGTTTTCCAGCCT | 60.1 | 0.07 |
mm4_intergenic_B230110C06Rik|Oxsm_chr14_15720609_F | Primer3: not found at this Tm | N.d. | 0.07 |
mm4_intergenic_B230110C06Rik|Oxsm_chr14_15720609_R | Primer3: not found at this Tm | N.d. | 0.07 |
mm4_intergenic_Gm25255|Csmd1_chr8_15563109_F | Primer3: not found at this Tm | N.d. | 0.07 |
mm4_intergenic_Gm25255|Csmd1_chr8_15563109_R | Primer3: not found at this Tm | N.d. | 0.07 |
mm4_intergenic_Minpp1|Papss2_chr19_32553769_F | TCGTCGGCAGCGTCCAGCAGCTTCAAGGTCTCCA | 59.9 | 0.07 |
mm4_intergenic_Minpp1|Papss2_chr19_32553769_R | GTCTCGTGGGCTCGGCTCTCTCTCATGCTGCCCTG | 59.8 | 0.07 |
mm4_intergenic_2810032G03Rik|Gm24758_chr12_5572747_F | TCGTCGGCAGCGTCACCTGGGACCATGCGATTTT | 59.9 | 0.07 |
mm4_intergenic_2810032G03Rik|Gm24758_chr12_5572747_R | GTCTCGTGGGCTCGGCCCCTCAGGCTCAGGAGATA | 59.8 | 0.07 |
mm3_intron_Tenm2_chr11_37024130_F | Primer3: not found at this Tm | N.d. | 0.07 |
mm3_intron_Tenm2_chr11_37024130_R | Primer3: not found at this Tm | N.d. | 0.07 |
mm4_intergenic_Cnksr3|Ulbp1_chr10_7225325_F | Primer3: not found at this Tm | N.d. | 0.07 |
mm4_intergenic_Cnksr3|Ulbp1_chr10_7225325_R | Primer3: not found at this Tm | N.d. | 0.07 |
mm4_intergenic_Gm23185|Gm23848_chr15_49464083_F | TCGTCGGCAGCGTCGAATTCCTGTTGGCTGTGGC | 59.7 | 0.07 |
mm4_intergenic_Gm23185|Gm23848_chr15_49464083_R | GTCTCGTGGGCTCGGGAAGGCCATGAGGAGACACA | 59.3 | 0.07 |
mm4_intergenic_Pi15|Gm16070_chr1_17666875_F | Primer3: not found at this Tm | N.d. | 0.07 |
mm4_intergenic_Pi15|Gm16070_chr1_17666875_R | Primer3: not found at this Tm | N.d. | 0.07 |
mm4_intergenic_Ddx18|Gm15394_chr1_121748885_F | Primer3: not found at this Tm | N.d. | 0.07 |
mm4_intergenic_Ddx18|Gm15394_chr1_121748885_R | Primer3: not found at this Tm | N.d. | 0.07 |
mm4_intron_Aff1_chr5_103747493_F | Primer3: not found at this Tm | N.d. | 0.07 |
mm4_intron_Aff1_chr5_103747493_R | Primer3: not found at this Tm | N.d. | 0.07 |
mm4_intergenic_Gopc/Gm26741|Gopc_chr10_52364688_F | Primer3: not found at this Tm | N.d. | 0.06 |
mm4_intergenic_Gopc/Gm26741|Gopc_chr10_52364688_R | Primer3: not found at this Tm | N.d. | 0.06 |
mm4_intergenic_Tec|Gm9870/Slain2_chr5_72874143_F | TCGTCGGCAGCGTCGGACCCCTGAGGAGAAGAGA | 59.6 | 0.06 |
mm4_intergenic_Tec|Gm9870/Slain2_chr5_72874143_R | GTCTCGTGGGCTCGGTGGATCCATTTCCAGCAACTCA | 59.9 | 0.06 |
mm4_intergenic_Gm11675|Gm11676_chr11_111305027_F | TCGTCGGCAGCGTCTCTCCTGAAACCATTTCTTCTCT | 57.1 | 0.06 |
mm4_intergenic_Gm11675|Gm11676_chr11_111305027_R | GTCTCGTGGGCTCGGCCTTCTGACCATCTTTCCCC | 57.5 | 0.06 |
mm4_intergenic_Ppm1e|Gm11490_chr11_87295626_F | Primer3: not found at this Tm | N.d. | 0.06 |
mm4_intergenic_Ppm1e|Gm11490_chr11_87295626_R | Primer3: not found at this Tm | N.d. | 0.06 |
mm4_exon_Tnfaip8_chr18_50092079_F | Primer3: not found at this Tm | N.d. | 0.06 |
mm4_exon_Tnfaip8_chr18_50092079_R | Primer3: not found at this Tm | N.d. | 0.06 |
mm4_intergenic_Rnf157|Ubald2_chr11_116418319_F | Primer3: not found at this Tm | N.d. | 0.06 |
mm4_intergenic_Rnf157|Ubald2_chr11_116418319_R | Primer3: not found at this Tm | N.d. | 0.06 |
mm4_intron_Cdhr2_chr13_54711623_F | TCGTCGGCAGCGTCCTGTGTGGACAGGAAGTGGC | 60.8 | 0.06 |
mm4_intron_Cdhr2_chr13_54711623_R | GTCTCGTGGGCTCGGACTCTGCCCTACCATCCCTT | 59.9 | 0.06 |
mm4_intergenic_Gm12122|Slit3_chr11_35497097_F | TCGTCGGCAGCGTCTGACAGTGTCAGCTACGACA | 58.6 | 0.06 |
mm4_intergenic_Gm12122|Slit3_chr11_35497097_R | GTCTCGTGGGCTCGGGCAATCTTCCCTCCCCTGAG | 59.8 | 0.06 |
mm4_intergenic_Sh3gl2|Gm12680_chr4_85510696_F | Primer3: not found at this Tm | N.d. | 0.06 |
mm4_intergenic_Sh3gl2|Gm12680_chr4_85510696_R | Primer3: not found at this Tm | N.d. | 0.06 |
mm3_intergenic_Gm23681|Peli1_chr11_21038506_F | TCGTCGGCAGCGTCCCTCACCTGGCACTATAGGC | 59.6 | 0.06 |
mm3_intergenic_Gm23681|Peli1_chr11_21038506_R | GTCTCGTGGGCTCGGACCACTCCAGACTGACAGGA | 59.8 | 0.06 |
mm3_intergenic_Gm25258|Hao1_chr2_134200629_F | TCGTCGGCAGCGTCACAGAGACCATTTGACACCCT | 58.9 | 0.06 |
mm3_intergenic_Gm25258|Hao1_chr2_134200629_R | GTCTCGTGGGCTCGGTTCACAGTTCAGTGGAGGGC | 59.8 | 0.06 |
mm4_intron_Tmod1_chr4_46055730_F | TCGTCGGCAGCGTCCTGGGCACAGTTTGAAAGCC | 59.9 | 0.06 |
mm4_intron_Tmod1_chr4_46055730_R | GTCTCGTGGGCTCGGCCACCTGGTTGGAGAGTCAG | 59.6 | 0.06 |
mm4_intron_Sorcs3_chr19_48738709_F | TCGTCGGCAGCGTCTGAGAAATGGCTCGGAGGAT | 58.5 | 0.06 |
mm4_intron_Sorcs3_chr19_48738709_R | GTCTCGTGGGCTCGGACCTTGAAAATAGTAGACACCTCA | 57.3 | 0.06 |
mm4_intron_Gm608_chr16_44210922_F | Primer3: not found at this Tm | N.d. | 0.06 |
mm4_intron_Gm608_chr16_44210922_R | Primer3: not found at this Tm | N.d. | 0.06 |
mm4_intron_Lrrc8b_chr5_105416448_F | TCGTCGGCAGCGTCTCGGTGGTTCCTCCTCCTAG | 60.0 | 0.06 |
mm4_intron_Lrrc8b_chr5_105416448_R | GTCTCGTGGGCTCGGGCAACCTACGGACTTTGGGA | 59.9 | 0.06 |
mm4_intergenic_Gm23152|Gm25265_chr2_166674988_F | TCGTCGGCAGCGTCCCACCTCAGAGTTGTAGCCC | 59.7 | 0.06 |
mm4_intergenic_Gm23152|Gm25265_chr2_166674988_R | GTCTCGTGGGCTCGGCTTGTCCCAGTCTGAGGCTG | 60.0 | 0.06 |
mm4_intergenic_Cdk12|Mir5119_chr11_98255101_F | TCGTCGGCAGCGTCAGAAGATTCCTGCAGCCCAG | 59.7 | 0.06 |
mm4_intergenic_Cdk12|Mir5119_chr11_98255101_R | GTCTCGTGGGCTCGGAAAGGAAGTGGGTGGACAGG | 59.5 | 0.06 |
mm4_intron_Zfp558_chr9_18466777_F | Primer3: not found at this Tm | N.d. | 0.06 |
mm4_intron_Zfp558_chr9_18466777_R | Primer3: not found at this Tm | N.d. | 0.06 |
mm4_intergenic_Atp1a1|Mab21l3_chr3_101694488_F | TCGTCGGCAGCGTCGGCTTGGTCTCTGACACACA | 59.8 | 0.06 |
mm4_intergenic_Atp1a1|Mab21l3_chr3_101694488_R | GTCTCGTGGGCTCGGCAGTGTGGGCTCTTCACCAT | 59.9 | 0.06 |
mm4_intron_Utrn_chr10_12535640_F | Primer3: not found at this Tm | N.d. | 0.06 |
mm4_intron_Utrn_chr10_12535640_R | Primer3: not found at this Tm | N.d. | 0.06 |
mm4_intron_Gm11346_chr13_24601967_F | Primer3: not found at this Tm | N.d. | 0.05 |
mm4_intron_Gm11346_chr13_24601967_R | Primer3: not found at this Tm | N.d. | 0.05 |
mm3_intergenic_Gm9931|Gm22966_chr1_147391084_F | TCGTCGGCAGCGTCCCCTCAGAATACTGTGTGAGACA | 59.4 | 0.05 |
mm3_intergenic_Gm9931|Gm22966_chr1_147391084_R | GTCTCGTGGGCTCGGTGTCTACTCCTTTAGCAAGCATGT | 60.0 | 0.05 |
mm4_intron_St5_chr7_109592153_F | TCGTCGGCAGCGTCGGATCGAGCGTGCAAGAGTA | 59.8 | 0.05 |
mm4_intron_St5_chr7_109592153_R | GTCTCGTGGGCTCGGGCTGTGGAGCAGGAGAGATC | 59.8 | 0.05 |
mm4_intergenic_Ighv8-5|Ighv1-50_chr12_115082754_F | Primer3: not found at this Tm | N.d. | 0.05 |
mm4_intergenic_Ighv8-5|Ighv1-50_chr12_115082754_R | Primer3: not found at this Tm | N.d. | 0.05 |
mm4_intergenic_Gm5839|Gm25440_chr18_49384436_F | Primer3: not found at this Tm | N.d. | 0.05 |
mm4_intergenic_Gm5839|Gm25440_chr18_49384436_R | Primer3: not found at this Tm | N.d. | 0.05 |
mm4_intergenic_Gm12467|Gm12475_chr4_52298804_F | Primer3: not found at this Tm | N.d. | 0.05 |
mm4_intergenic_Gm12467|Gm12475_chr4_52298804_R | Primer3: not found at this Tm | N.d. | 0.05 |
mm4_intergenic_Gm13216|Camk1d_chr2_5648683_F | TCGTCGGCAGCGTCGGGACTCTAAACCCATGGGC | 60.1 | 0.05 |
mm4_intergenic_Gm13216|Camk1d_chr2_5648683_R | GTCTCGTGGGCTCGGAGCTTTCACAAAACAGGCCT | 58.2 | 0.05 |
mm4_intergenic_Gm22385|Snx18_chr13_113552661_F | TCGTCGGCAGCGTCCCTGCTGAGGACAGTCTAGC | 59.5 | 0.05 |
mm4_intergenic_Gm22385|Snx18_chr13_113552661_R | GTCTCGTGGGCTCGGACAGTTGAGAACCTTCCTCTGA | 58.6 | 0.05 |
mm4_intron_Zmat4_chr8_23922806_F | TCGTCGGCAGCGTCCTGGGAGCTGGTGATGGAAG | 60.1 | 0.05 |
mm4_intron_Zmat4_chr8_23922806_R | GTCTCGTGGGCTCGGGCAGGTTTTCCAAGGAAGCC | 59.6 | 0.05 |
mm4_intergenic_Gm25266|Cradd_chr10_95074521_F | Primer3: not found at this Tm | N.d. | 0.05 |
mm4_intergenic_Gm25266|Cradd_chr10_95074521_R | Primer3: not found at this Tm | N.d. | 0.05 |
mm4_intron_Uck2_chr1_167258829_F | Primer3: not found at this Tm | N.d. | 0.05 |
mm4_intron_Uck2_chr1_167258829_R | Primer3: not found at this Tm | N.d. | 0.05 |
mm3_intron_Cpvl_chr6_53946004_F | TCGTCGGCAGCGTCCCTGATAGAGGGACTGAATGTGA | 59.0 | 0.05 |
mm3_intron_Cpvl_chr6_53946004_R | GTCTCGTGGGCTCGGGCGAGTTCGTGAGACAGGAA | 60.0 | 0.05 |
mm4_intron_Abca13_chr11_9505415_F | TCGTCGGCAGCGTCCTTCCCTGAGCACCTTGGTC | 60.3 | 0.05 |
mm4_intron_Abca13_chr11_9505415_R | GTCTCGTGGGCTCGGTCCATAAGGCAGCCAGTGTG | 60.0 | 0.05 |
mm4_exon_Ric3_chr7_109047919_F | Primer3: not found at this Tm | N.d. | 0.04 |
mm4_exon_Ric3_chr7_109047919_R | Primer3: not found at this Tm | N.d. | 0.04 |
mm4_intergenic_4930564D02Rik|1700095B22Rik_chr3_105319161_F | Primer3: not found at this Tm | N.d. | 0.04 |
mm4_intergenic_4930564D02Rik|1700095B22Rik_chr3_105319161_R | Primer3: not found at this Tm | N.d. | 0.04 |
mm4_intron_Cage1_chr13_38017468_F | TCGTCGGCAGCGTCCGTGGCAAGGTCCTAAGGAT | 59.4 | 0.04 |
mm4_intron_Cage1_chr13_38017468_R | GTCTCGTGGGCTCGGAGCATGGGATTCAGTGTGGT | 59.2 | 0.04 |
mm4_intergenic_4930547M16Rik|2010001E11Rik_chr10_39909133_F | TCGTCGGCAGCGTCAGAAACGCCAGCAGCTAGTC | 60.3 | 0.04 |
mm4_intergenic_4930547M16Rik|2010001E11Rik_chr10_39909133_R | GTCTCGTGGGCTCGGCAGCTCTGCCCTTCTTTGGA | 59.9 | 0.04 |
mm4_intergenic_Kif20b|Gm24006_chr19_35079926_F | Primer3: not found at this Tm | N.d. | 0.04 |
mm4_intergenic_Kif20b|Gm24006_chr19_35079926_R | Primer3: not found at this Tm | N.d. | 0.04 |
mm3_intron_Abca16_chr7_120477505_F | Primer3: not found at this Tm | N.d. | 0.04 |
mm3_intron_Abca16_chr7_120477505_R | Primer3: not found at this Tm | N.d. | 0.04 |
mm4_intergenic_Tars|Npr3_chr15_11470390_F | TCGTCGGCAGCGTCGGGGAGGGAGCACACATAAC | 60.1 | 0.04 |
mm4_intergenic_Tars|Npr3_chr15_11470390_R | GTCTCGTGGGCTCGGTCCAGCACCTTTGAGGACAA | 59.1 | 0.04 |
mm4_intergenic_Gm23249|Gm9726/mmu-mir-8099-2_chr12_93827295_F | TCGTCGGCAGCGTCGCCGACTCCTTGAAAGTTGC | 59.7 | 0.04 |
mm4_intergenic_Gm23249|Gm9726/mmu-mir-8099-2_chr12_93827295_R | GTCTCGTGGGCTCGGTCTTTGGTGTAACCTTCCCATT | 57.5 | 0.04 |
mm2_intron_4930440I19Rik_chr2_78108608_F | Primer3: not found at this Tm | N.d. | 0.04 |
mm2_intron_4930440I19Rik_chr2_78108608_R | Primer3: not found at this Tm | N.d. | 0.04 |
mm4_intron_Bfsp1_chr2_143846269_F | Primer3: not found at this Tm | N.d. | 0.04 |
mm4_intron_Bfsp1_chr2_143846269_R | Primer3: not found at this Tm | N.d. | 0.04 |
mm4_intergenic_Gm24267|Gm22438_chr1_107854631_F | Primer3: not found at this Tm | N.d. | 0.04 |
mm4_intergenic_Gm24267|Gm22438_chr1_107854631_R | Primer3: not found at this Tm | N.d. | 0.04 |
mm4_intron_Pard3b_chr1_62634057_F | Primer3: not found at this Tm | N.d. | 0.04 |
mm4_intron_Pard3b_chr1_62634057_R | Primer3: not found at this Tm | N.d. | 0.04 |
mm4_intron_Ppp1r9a_chr6_5093511_F | Primer3: not found at this Tm | N.d. | 0.04 |
mm4_intron_Ppp1r9a_chr6_5093511_R | Primer3: not found at this Tm | N.d. | 0.04 |
mm4_intergenic_B130011K05Rik|Gm12287_chr11_63535759_F | TCGTCGGCAGCGTCTCAGTGCACTTTGAGCCAGA | 59.5 | 0.04 |
mm4_intergenic_B130011K05Rik|Gm12287_chr11_63535759_R | GTCTCGTGGGCTCGGGGAGACAGGTGGTGGAAGGA | 60.8 | 0.04 |
mm4_intergenic_Ankrd9|Rcor1_chr12_111035352_F | Primer3: not found at this Tm | N.d. | 0.04 |
mm4_intergenic_Ankrd9|Rcor1_chr12_111035352_R | Primer3: not found at this Tm | N.d. | 0.04 |
mm4_intergenic_Gm14520|Gm14516_chrX_16331059_F | Primer3: not found at this Tm | N.d. | 0.03 |
mm4_intergenic_Gm14520|Gm14516_chrX_16331059_R | Primer3: not found at this Tm | N.d. | 0.03 |
mm4_intergenic_Gm25736|Tmeff2_chr1_51033739_F | TCGTCGGCAGCGTCGACAAGCCCACACTTTTCACC | 59.9 | 0.03 |
mm4_intergenic_Gm25736|Tmeff2_chr1_51033739_R | GTCTCGTGGGCTCGGCGATGCATACACCAGACCCA | 59.8 | 0.03 |
mm2_intergenic_Gm26915|Nrip1_chr16_76262561_F | Primer3: not found at this Tm | N.d. | 0.03 |
mm2_intergenic_Gm26915|Nrip1_chr16_76262561_R | Primer3: not found at this Tm | N.d. | 0.03 |
mm4_intron_Pitpnc1_chr11_107294738_F | Primer3: not found at this Tm | N.d. | 0.03 |
mm4_intron_Pitpnc1_chr11_107294738_R | Primer3: not found at this Tm | N.d. | 0.03 |
mm4_intergenic_Gm26288|Atp10a_chr7_58334870_F | Primer3: not found at this Tm | N.d. | 0.03 |
mm4_intergenic_Gm26288|Atp10a_chr7_58334870_R | Primer3: not found at this Tm | N.d. | 0.03 |
mm4_intergenic_Gm22673|Gm23059_chr12_60222087_F | Primer3: not found at this Tm | N.d. | 0.03 |
mm4_intergenic_Gm22673|Gm23059_chr12_60222087_R | Primer3: not found at this Tm | N.d. | 0.03 |
mm4_intron_Srgap1_chr10_121910169_F | Primer3: not found at this Tm | N.d. | 0.03 |
mm4_intron_Srgap1_chr10_121910169_R | Primer3: not found at this Tm | N.d. | 0.03 |
mm4_intron_Col23a1_chr11_51294879_F | TCGTCGGCAGCGTCAAGGGAGTTTGAGACCTGGC | 59.5 | 0.03 |
mm4_intron_Col23a1_chr11_51294879_R | GTCTCGTGGGCTCGGGCTCTGGGTATTGGCTTGCT | 60.3 | 0.03 |
mm4_intergenic_Ctnna3|Gm22829_chr10_66114373_F | TCGTCGGCAGCGTCGAGCATGTGTGTGGGAGTCA | 59.9 | 0.03 |
mm4_intergenic_Ctnna3|Gm22829_chr10_66114373_R | GTCTCGTGGGCTCGGTCCCACGTTCTCTTGCAACC | 60.5 | 0.03 |
mm4_intergenic_Cobl|Gm22156_chr11_12579271_F | Primer3: not found at this Tm | N.d. | 0.03 |
mm4_intergenic_Cobl|Gm22156_chr11_12579271_R | Primer3: not found at this Tm | N.d. | 0.03 |
mm3_intron_Robo1_chr16_72890665_F | TCGTCGGCAGCGTCAGACCTTTTCAACTGTTCAAGTGA | 58.7 | 0.03 |
mm3_intron_Robo1_chr16_72890665_R | GTCTCGTGGGCTCGGGGAAGCTGTTTGTGGTGTGG | 59.6 | 0.03 |
mm4_intergenic_Fam173b|Tas2r119_chr15_32111432_F | TCGTCGGCAGCGTCAGAGTCCATGGCAGTTGCTC | 60.0 | 0.03 |
mm4_intergenic_Fam173b|Tas2r119_chr15_32111432_R | GTCTCGTGGGCTCGGTGAAGTAACCCACCCACTGG | 59.2 | 0.03 |
mm4_intron_Gm12248_chr11_58068830_F | Primer3: not found at this Tm | N.d. | 0.03 |
mm4_intron_Gm12248_chr11_58068830_R | Primer3: not found at this Tm | N.d. | 0.03 |
mm4_intergenic_Sult1c1|Slc5a7_chr17_54017155_F | Primer3: not found at this Tm | N.d. | 0.03 |
mm4_intergenic_Sult1c1|Slc5a7_chr17_54017155_R | Primer3: not found at this Tm | N.d. | 0.03 |
mm4_intergenic_Spz1|Serinc5_chr13_92608814_F | Primer3: not found at this Tm | N.d. | 0.03 |
mm4_intergenic_Spz1|Serinc5_chr13_92608814_R | Primer3: not found at this Tm | N.d. | 0.03 |
mm4_intergenic_Mctp1|Gm21959_chr13_76680100_F | Primer3: not found at this Tm | N.d. | 0.03 |
mm4_intergenic_Mctp1|Gm21959_chr13_76680100_R | Primer3: not found at this Tm | N.d. | 0.03 |
mm4_intergenic_Hsbp1|Mlycd_chr8_119377996_F | Primer3: not found at this Tm | N.d. | 0.03 |
mm4_intergenic_Hsbp1|Mlycd_chr8_119377996_R | Primer3: not found at this Tm | N.d. | 0.03 |
mm4_intergenic_Gap|Gm9071_chr12_3014658_F | Primer3: not found at this Tm | N.d. | 0.03 |
mm4_intergenic_Gap|Gm9071_chr12_3014658_R | Primer3: not found at this Tm | N.d. | 0.03 |
mm4_intergenic_Gap|Gm3104_chr7_3070929_F | Primer3: not found at this Tm | N.d. | 0.03 |
mm4_intergenic_Gap|Gm3104_chr7_3070929_R | Primer3: not found at this Tm | N.d. | 0.03 |
mm4_intergenic_Gap|Gm3027_chr5_3021007_F | Primer3: not found at this Tm | N.d. | 0.03 |
mm4_intergenic_Gap|Gm3027_chr5_3021007_R | Primer3: not found at this Tm | N.d. | 0.03 |
mm3_intergenic_Sh3rf3|AC153944.1_chr10_58833930_F | Primer3: not found at this Tm | N.d. | 0.03 |
mm3_intergenic_Sh3rf3|AC153944.1_chr10_58833930_R | Primer3: not found at this Tm | N.d. | 0.03 |
mm4_intergenic_Gm25497|Lrrn3_chr12_41378833_F | Primer3: not found at this Tm | N.d. | 0.03 |
mm4_intergenic_Gm25497|Lrrn3_chr12_41378833_R | Primer3: not found at this Tm | N.d. | 0.03 |
mm4_intergenic_Ppp3r2|Grin3a_chr4_49701614_F | Primer3: not found at this Tm | N.d. | 0.03 |
mm4_intergenic_Ppp3r2|Grin3a_chr4_49701614_R | Primer3: not found at this Tm | N.d. | 0.03 |
mm4_intergenic_E030013I19Rik|Fam188a_chr2_12329309_F | TCGTCGGCAGCGTCAAGCGAGCCTGCCTTCAG | 60.0 | 0.03 |
mm4_intergenic_E030013I19Rik|Fam188a_chr2_12329309_R | GTCTCGTGGGCTCGGTGTGTGTCTAAAACCTTTGGTGA | 58.4 | 0.03 |
mm4_intergenic_Gm9897|Fzd1_chr5_4650311_F | TCGTCGGCAGCGTCAAACTGTTGAACGTGGCAGC | 59.8 | 0.03 |
mm4_intergenic_Gm9897|Fzd1_chr5_4650311_R | GTCTCGTGGGCTCGGAGTTCTGGCCTGCCAACTG | 60.2 | 0.03 |
mm4_exon_Gm4890_chr8_79306469_F | TCGTCGGCAGCGTCTGCAGCAAACTGGAGCCTTA | 59.8 | 0.03 |
mm4_exon_Gm4890_chr8_79306469_R | GTCTCGTGGGCTCGGAGATGGGGTGGAGGTGGTAA | 59.8 | 0.03 |
mm4_intergenic_Il10rb|A930006K02Rik_chr16_91436660_F | TCGTCGGCAGCGTCGTAGTCCTTGTGGTGGTTCCA | 59.5 | 0.03 |
mm4_intergenic_Il10rb|A930006K02Rik_chr16_91436660_R | GTCTCGTGGGCTCGGGGCCATTGTTCCTGCTGTCT | 60.6 | 0.03 |
mm3_intergenic_Gm5558|Rchy1_chr5_91896898_F | Primer3: not found at this Tm | N.d. | 0.02 |
mm3_intergenic_Gm5558|Rchy1_chr5_91896898_R | Primer3: not found at this Tm | N.d. | 0.02 |
mm4_intron_Arid2_chr15_96296981_F | Primer3: not found at this Tm | N.d. | 0.02 |
mm4_intron_Arid2_chr15_96296981_R | Primer3: not found at this Tm | N.d. | 0.02 |
mm3_intergenic_4631405K08Rik|Plxna2_chr1_194589424_F | Primer3: not found at this Tm | N.d. | 0.02 |
mm3_intergenic_4631405K08Rik|Plxna2_chr1_194589424_R | Primer3: not found at this Tm | N.d. | 0.02 |
mm4_intron_Pde4d_chr13_108802917_F | TCGTCGGCAGCGTCTGCCAGCCTAGAATGTGACT | 58.7 | 0.02 |
mm4_intron_Pde4d_chr13_108802917_R | GTCTCGTGGGCTCGGACCAAAATGAGCTACTCTGACAGT | 59.9 | 0.02 |
mm4_intron_Fars2_chr13_36521133_F | Primer3: not found at this Tm | N.d. | 0.02 |
mm4_intron_Fars2_chr13_36521133_R | Primer3: not found at this Tm | N.d. | 0.02 |
mm2_intergenic_Tas2r125|Tas2r129_chr6_132913484_F | Primer3: not found at this Tm | N.d. | 0.02 |
mm2_intergenic_Tas2r125|Tas2r129_chr6_132913484_R | Primer3: not found at this Tm | N.d. | 0.02 |
mm4_intron_Gm14206_chr11_100285194_F | Primer3: not found at this Tm | N.d. | 0.02 |
mm4_intron_Gm14206_chr11_100285194_R | Primer3: not found at this Tm | N.d. | 0.02 |
mm4_intergenic_Ccdc71l|Nampt_chr12_32805638_F | Primer3: not found at this Tm | N.d. | 0.02 |
mm4_intergenic_Ccdc71l|Nampt_chr12_32805638_R | Primer3: not found at this Tm | N.d. | 0.02 |
mm4_intergenic_Iqcf4|Iqcf6_chr9_106578955_F | Primer3: not found at this Tm | N.d. | 0.02 |
mm4_intergenic_Iqcf4|Iqcf6_chr9_106578955_R | Primer3: not found at this Tm | N.d. | 0.02 |
mm4_intergenic_Vmn2r-ps3|Vmn2r1_chr3_64080251_F | Primer3: not found at this Tm | N.d. | 0.02 |
mm4_intergenic_Vmn2r-ps3|Vmn2r1_chr3_64080251_R | Primer3: not found at this Tm | N.d. | 0.02 |
mm4_exon_Ttc26_chr6_38426409_F | Primer3: not found at this Tm | N.d. | 0.02 |
mm4_exon_Ttc26_chr6_38426409_R | Primer3: not found at this Tm | N.d. | 0.02 |
mm4_intron_Csmd1_chr8_17177883_F | Primer3: not found at this Tm | N.d. | 0.02 |
mm4_intron_Csmd1_chr8_17177883_R | Primer3: not found at this Tm | N.d. | 0.02 |
mm4_intron_Vps13d_chr4_145135645_F | TCGTCGGCAGCGTCAAAAGTGTGGCTCTCTGGGG | 59.8 | 0.02 |
mm4_intron_Vps13d_chr4_145135645_R | GTCTCGTGGGCTCGGTGCAGGAAGTTTGCACTACTGA | 60.1 | 0.02 |
mm3_intron_Gm26787_chr9_36773320_F | Primer3: not found at this Tm | N.d. | 0.02 |
mm3_intron_Gm26787_chr9_36773320_R | Primer3: not found at this Tm | N.d. | 0.02 |
mm4_intergenic_Gm8993|Gm9001_chr6_75354837_F | Primer3: not found at this Tm | N.d. | 0.01 |
mm4_intergenic_Gm8993|Gm9001_chr6_75354837_R | Primer3: not found at this Tm | N.d. | 0.01 |
mm4_exon_Nek1_chr8_61086499_F | Primer3: not found at this Tm | N.d. | 0.01 |
mm4_exon_Nek1_chr8_61086499_R | Primer3: not found at this Tm | N.d. | 0.01 |
mm4_intergenic_Ppp1r2-ps2|Nup210_chr6_91010615_F | Primer3: not found at this Tm | N.d. | 0.01 |
mm4_intergenic_Ppp1r2-ps2|Nup210_chr6_91010615_R | Primer3: not found at this Tm | N.d. | 0.01 |
mm4_intergenic_Def6|Ppard_chr17_28229538_F | TCGTCGGCAGCGTCCGGCCCCACGTTTAGTAAGT | 60.0 | 0.01 |
mm4_intergenic_Def6|Ppard_chr17_28229538_R | GTCTCGTGGGCTCGGCCATCCGGGCAGCAGAATTA | 60.1 | 0.01 |
mm4_intergenic_Trib1|Gm7083_chr15_59920592_F | Primer3: not found at this Tm | N.d. | 0.01 |
mm4_intergenic_Trib1|Gm7083_chr15_59920592_R | Primer3: not found at this Tm | N.d. | 0.01 |
mm4_intergenic_Rps19-ps12|Gm23083_chr16_79940730_F | Primer3: not found at this Tm | N.d. | 0.01 |
mm4_intergenic_Rps19-ps12|Gm23083_chr16_79940730_R | Primer3: not found at this Tm | N.d. | 0.01 |
mm4_intergenic_Nipsnap3b|Abca1_chr4_53022217_F | Primer3: not found at this Tm | N.d. | 0.01 |
mm4_intergenic_Nipsnap3b|Abca1_chr4_53022217_R | Primer3: not found at this Tm | N.d. | 0.01 |
mm4_intergenic_Clic5|Runx2_chr17_44358764_F | TCGTCGGCAGCGTCGGAGCACAACAGCTGGAACT | 60.5 | 0.01 |
mm4_intergenic_Clic5|Runx2_chr17_44358764_R | GTCTCGTGGGCTCGGTAGGGAGCACCACAGCAAAG | 59.9 | 0.01 |
mm4_intergenic_Clec14a|Gm17529_chr12_58269391_F | Primer3: not found at this Tm | N.d. | 0.01 |
mm4_intergenic_Clec14a|Gm17529_chr12_58269391_R | Primer3: not found at this Tm | N.d. | 0.01 |
mm4_intergenic_Gm8812|Map2_chr1_66138725_F | Primer3: not found at this Tm | N.d. | 0.01 |
mm4_intergenic_Gm8812|Map2_chr1_66138725_R | Primer3: not found at this Tm | N.d. | 0.01 |
mm4_intergenic_Pdzd2|Gm24302_chr15_12687446_F | Primer3: not found at this Tm | N.d. | 0.01 |
mm4_intergenic_Pdzd2|Gm24302_chr15_12687446_R | Primer3: not found at this Tm | N.d. | 0.01 |
mm4_intergenic_Pdgfc|Gm22531_chr3_81496345_F | TCGTCGGCAGCGTCTGCTGTGATGGAACCAGCAA | 60.1 | 0.01 |
mm4_intergenic_Pdgfc|Gm22531_chr3_81496345_R | GTCTCGTGGGCTCGGTCCAGAGTCATCCTTTTGGCC | 59.9 | 0.01 |
mm4_intron_Plekhm3_chr1_64920806_F | Primer3: not found at this Tm | N.d. | 0.01 |
mm4_intron_Plekhm3_chr1_64920806_R | Primer3: not found at this Tm | N.d. | 0.01 |
mm4_intergenic_Alox12|Alox12e_chr11_70289864_F | Primer3: not found at this Tm | N.d. | 0.01 |
mm4_intergenic_Alox12|Alox12e_chr11_70289864_R | Primer3: not found at this Tm | N.d. | 0.01 |
mm4_intron_Prlr_chr15_10306078_F | TCGTCGGCAGCGTCACTGTGGCAGGTTCTGGATC | 59.6 | 0.01 |
mm4_intron_Prlr_chr15_10306078_R | GTCTCGTGGGCTCGGGTCCAACAAGAAATTCACCCCA | 59.0 | 0.01 |
mm4_intron_Atp2c1_chr9_105436451_F | TCGTCGGCAGCGTCAGCAGGCAAGCAGTACTTCT | 59.3 | 0.01 |
mm4_intron_Atp2c1_chr9_105436451_R | GTCTCGTGGGCTCGGGGTGGGTTAAGGGGAGTTCC | 59.6 | 0.01 |
mm4_intron_Lrrc20_chr10_61484047_F | Primer3: not found at this Tm | N.d. | 0.00 |
mm4_intron_Lrrc20_chr10_61484047_R | Primer3: not found at this Tm | N.d. | 0.00 |
mm4_intergenic_Vgll1|Gm14718_chrX_57109689_F | Primer3: not found at this Tm | N.d. | 0.00 |
mm4_intergenic_Vgll1|Gm14718_chrX_57109689_R | Primer3: not found at this Tm | N.d. | 0.00 |
mm4_intergenic_Zcchc6|Gas1_chr13_59982885_F | TCGTCGGCAGCGTCAGGAGGTGACCAGGGCTAAA | 60.1 | 0.00 |
mm4_intergenic_Zcchc6|Gas1_chr13_59982885_R | GTCTCGTGGGCTCGGGGTCTCCTCTCCCAACTTCC | 59.0 | 0.00 |
mm4_intron_Pdzd2_chr15_12433998_F | TCGTCGGCAGCGTCACACCCCAGAAACCAGGTTG | 60.1 | 0.00 |
mm4_intron_Pdzd2_chr15_12433998_R | GTCTCGTGGGCTCGGAGTAAACATCTGGGCGGTCG | 60.1 | 0.00 |
mm4_intron_Gpc6_chr14_117753829_F | Primer3: not found at this Tm | N.d. | 0.00 |
mm4_intron_Gpc6_chr14_117753829_R | Primer3: not found at this Tm | N.d. | 0.00 |
mm4_intron_Gm7942_chr5_95108284_F | TCGTCGGCAGCGTCGAGTCTGCCATGATGCCACT | 60.1 | 0.00 |
mm4_intron_Gm7942_chr5_95108284_R | GTCTCGTGGGCTCGGGCTTCTGAGTTACTGCTCATGC | 59.6 | 0.00 |
mm4_intron_AC140365.1_chr5_JH584299_random_717643_F | TCGTCGGCAGCGTCGAGTCTGCCATGATGCCACT | 60.1 | 0.00 |
mm4_intron_AC140365.1_chr5_JH584299_random_717643_R | GTCTCGTGGGCTCGGGCTTCTGAGTTACTGCTCATGC | 59.6 | 0.00 |
mm4_intergenic_Mmrn1|A730020E08Rik_chr6_61078083_F | Primer3: not found at this Tm | N.d. | 0.00 |
mm4_intergenic_Mmrn1|A730020E08Rik_chr6_61078083_R | Primer3: not found at this Tm | N.d. | 0.00 |
mm4_intergenic_Mki67|Gm9341_chr7_135860381_F | Primer3: not found at this Tm | N.d. | 0.00 |
mm4_intergenic_Mki67|Gm9341_chr7_135860381_R | Primer3: not found at this Tm | N.d. | 0.00 |
mm4_intergenic_Hnf4g|Rps24-ps2_chr3_3746741_F | Primer3: not found at this Tm | N.d. | 0.00 |
mm4_intergenic_Hnf4g|Rps24-ps2_chr3_3746741_R | Primer3: not found at this Tm | N.d. | 0.00 |
mm4_intergenic_Gm8260|Gm6760_chrX_64090212_F | Primer3: not found at this Tm | N.d. | 0.00 |
mm4_intergenic_Gm8260|Gm6760_chrX_64090212_R | Primer3: not found at this Tm | N.d. | 0.00 |
mm4_intergenic_Gm6205|Gm3183_chr5_94778044_F | TCGTCGGCAGCGTCGAGTCTGCCATGATGCCACT | 60.1 | 0.00 |
mm4_intergenic_Gm6205|Gm3183_chr5_94778044_R | GTCTCGTGGGCTCGGGCTTCTGAGTTACTGCTCATGC | 59.6 | 0.00 |
mm4_intergenic_Gm5742|Gm22223_chr8_100093560_F | Primer3: not found at this Tm | N.d. | 0.00 |
mm4_intergenic_Gm5742|Gm22223_chr8_100093560_R | Primer3: not found at this Tm | N.d. | 0.00 |
mm4_intergenic_Gm3259|D5Ertd577e_chr5_95425763_F | Primer3: not found at this Tm | N.d. | 0.00 |
mm4_intergenic_Gm3259|D5Ertd577e_chr5_95425763_R | Primer3: not found at this Tm | N.d. | 0.00 |
mm4_intergenic_Gm23752|Gm24815_chr12_5946078_F | Primer3: not found at this Tm | N.d. | 0.00 |
mm4_intergenic_Gm23752|Gm24815_chr12_5946078_R | Primer3: not found at this Tm | N.d. | 0.00 |
mm4_intergenic_GM6367|AC123873.1_chr5_JH584299_random_90346_F | TCGTCGGCAGCGTCGAGTCTGCCATGATGCCACT | 60.1 | 0.00 |
mm4_intergenic_GM6367|AC123873.1_chr5_JH584299_random_90346_R | GTCTCGTGGGCTCGGGCTTCTGAGTTACTGCTCATGC | 59.6 | 0.00 |
mm4_intergenic_Ap3s1-ps1|Gm14565_chrX_38693464_F | Primer3: not found at this Tm | N.d. | 0.00 |
mm4_intergenic_Ap3s1-ps1|Gm14565_chrX_38693464_R | Primer3: not found at this Tm | N.d. | 0.00 |
mm4_intergenic_AC126035.1|Gm16367_chr5_JH584299_random_396846_F | TCGTCGGCAGCGTCGAGTCTGCCATGATGCCACT | 60.1 | 0.00 |
mm4_intergenic_AC126035.1|Gm16367_chr5_JH584299_random_396846_R | GTCTCGTGGGCTCGGGCTTCTGAGTTACTGCTCATGC | 59.6 | 0.00 |
mm4_intergenic_4930595M18Rik|Gm8822_chrX_81482320_F | Primer3: not found at this Tm | N.d. | 0.00 |
mm4_intergenic_4930595M18Rik|Gm8822_chrX_81482320_R | Primer3: not found at this Tm | N.d. | 0.00 |
mm4_exon_Icam5/Gm26592_chr9_21037130_F | TCGTCGGCAGCGTCGATTCACGGACGGTCACTGT | 60.0 | 0.00 |
mm4_exon_Icam5/Gm26592_chr9_21037130_R | GTCTCGTGGGCTCGGTCACGGCACTTTTCTAGCGG | 60.6 | 0.00 |
mm4_exon_Gm14661_chrX_60807304_F | Primer3: not found at this Tm | N.d. | 0.00 |
mm4_exon_Gm14661_chrX_60807304_R | Primer3: not found at this Tm | N.d. | 0.00 |
These only list off-targets that have primers in the table above. Primers underlined, off-targets in bold.
ontarget_mm0_exon_5730457N03Rik/Evx1_chr6_52313594 |
CGTCACCAGCGGTACTGTAATGACGATTGCAGCAGGAGGATGACAGCTTAGAAAGAAGAGGGCAATGGGGCTTCCTCCCA GAGGCGGTGCGGCACAGAGGAGCGCTCGCATCACAAGGTGACCC |
mm2_intergenic_Gm14825|4932442L08Rik_chrX_94349572 |
GTGTGTCCAGTCACTTACACTTTCCTTTCCTTTAGACTTCATTTTCAGTAGCCAAAGAAAAACAAATAACGGATTTCCCC TTCTTTCTAAACTGTCAACAGTTTACATTCAAAGAAAGTGTCTGTGAGACCAGTGAGAGA |
mm2_intergenic_Slc7a11|Gm24503_chr3_50826456 |
TCCTCCAAGCTCCCAGAGAATAAATTTGTTCCTTTTCTGTTTTGTTTTTCTTCAAGATATGACATCTTAGAAAGAAGGGG CTGGGAGTGGTGGGGGGAGAGCACTTTCTGCTTCTGTGGATAGAAACATGCAGTGTGC |
mm3_intergenic_Gm24200|1190002N15Rik_chr9_94382346 |
ACTGTGTTCTGATTTCTGCCTCAAGAGATAGACTATAGGAGTTGTGCTTTACCCCCTTCTTTTCAAGCTTTCATCAAAAT AAAGATAAATTTCAGATGGGGTAGAGGCAGCGCAGTCCATCTGGTGCTAG |
mm4_intron_Prkd1_chr12_50413040 |
GGAAGCCCAGGTATGCACATTATAAAGAAAGTCAGTCTAGATGTTGACAACATAGAAAGAAAAGGGAAGTGAAAGTTTGG GAAGGGGAGGGTCGTGAGTGAATG |
mm4_intergenic_Fam98a|Gm24126_chr17_75618210 |
TGCTGGAAAATGTACCCTAAGTGACATAATATTAGAATAAGTTAATACTGCCTTTTCTTTCTAAGCTTTTAACCTGCTCT CAATCAAGAAGTTCTTAACCCAGGCCTTTTGGATGT |
mm3_intron_Cntnap2_chr6_46916683 |
ATGTAAGCAGTGTAGGGCCCCTGGTCCCACCCCCTCTTCTCTCTAAGCTTTTATCTTTGCCGCCCACTTCTCACTTGCTT CCATTCCCTGCA |
mm4_exon_BC006965_chr11_112664435 |
CACAGTCCCTATCCGCTGTCAACTAGAAGATACCACTGATGGTGACTTAGAAAGAAGGGGGAAGTGGCTTTGTATTTGTT TAATTATTTTTAGCCAATAGGACTCACAAGGC |
mm3_intron_Vwa8_chr14_79066392 |
TTGTGAAGAGCAGCCCTTGGTGCAGTGGGCTAGCACCTGCCAGGGCAAGAGATTGCTATCTCTGTGCTCACAATGGCAGC TTAGAGAGAAGAGGGTTGAACTTGCACTTGAGATTGGGCTAGACACAGCTGC |
mm3_intergenic_2700046A07Rik|Apcdd1_chr18_62871898 |
ACCTCACCCACAAACCAGATGATGGCAGGTTAGAAAGAAAAGGGCTGAGTTTTATGAGTCGTTCCAAAAATCTTGTAGCT ACCAGCCTCCTAACTTCCCC |
mm4_intergenic_Gm11528|Phb_chr11_95666480 |
GACCTGAATGACCGACTCCCTTCCTCTTCTTTCTAAGCCGTTTTTAAGGTTATGGAGTGGCTTGGAAGATCAACATCTTA CGTCCCTGAGGGCTGTCCTTAACTTCCCTAGCAGTCTCTCAGTGC |
mm3_intergenic_Fmn2|Grem2_chr1_174825141 |
AGCTGTCCCTTGTTCAACCACAAATGCATGACAAATTTTAAAATAGATGACAGTGTAAAAAGAAGGGGCCCAAAGCTGTT TCCTTATAATTAAGGCAGTTAAGTAGGTGTAAATGTGG |
mm3_intergenic_9530036O11Rik|Rnf32_chr5_29138728 |
GCATGATGGGTCCCTAGCTCATATCTGTTAATTGCTTTTTAAAAAAAAAAGTAACAGGTAATTGAGACAACTCCTCTTCT TTCCATCCTGTCATCCCAGAAGATAGCCTTCTCAAGCAGGCAATACA |
mm4_intergenic_Stim2|Gm24235_chr5_54437492 |
CCCACCCCAATCATACATTCCTGACAACAACAGTCCTCTTCTTTTTATCCTGTCATGAAAGACTTACTCCAGCCAAATGA ACCAACTGCTAAAGTGCACG |
mm4_intergenic_Mtpn|Gm23273_chr6_35748942 |
GAGCCCCAAATCTTCCAGGTAAGTCTCCAAATCCATCTTTTCTCTCTCCTCTTCTTTCCAAGCCTTCTTCAGAACTTGAC TGGTGCATACAAACTGGAACAACATTTCAGGTGCTAGTGAAGCTTTCTGTGCTAGGCAGA |
mm4_intergenic_Gm9578|Gm22891_chr14_82071353 |
TCTTTGGCCATCTCTTGCCTAATGTATAGCGTGGCATAAAAATGAGACCCTGTTTCCACAAAAATGAGGTCCACAGTCTG CCACTTCTTTCTGAGGTGTCAGACAACCAAGTAAGTGGTGGGAGGAGGG |
mm4_intergenic_Robo3|Msantd2_chr9_37459844 |
GAACCGGCCCCTAAGTTCTTTACCCATTTCTCTCCAAGCTGTCTTCTCACCCTAGCATTAAAGGTGGAACGTACACGTAG CCAGGCTTCA |
mm4_intron_Ntrk3_chr7_78369908 |
ACATTGTCCTTCTCAGGTAGTCAATAAATATCACTTGATGATAGATAACGAATAAGGCATTGATTTTTCCATTCCCTCTT CTTTCTATGTTCTCTTCTCCCTCCCTCCTTTCTCGGGGTACAGGT |
mm4_intergenic_Gm3756|Arhgap32_chr9_32111940 |
TGCCTTTCTCGGAACCTGAATGTGGATCTGTATGTGCTATTCTACCCCTTTGCCTCTTTTTTCTCTGCTTTCATCATATT TCTGTTCACTTGTTCCCACCGTGATCATGAAGCAGCTGC |
mm3_intergenic_Gm15746|B630019A10Rik_chr16_23214292 |
TTGTGTGGCTCATGACAGCTAAGAGAGAGATGAGGTATGGGTTGTGTGAAGGGGTTGTATTCATGACAGCTAAGAAAGAT GAGGTATGCCAGCCGGAAGTTCAGATGGCCAAGACCCA |
mm4_intergenic_Kcnc2|Atxn7l3b/Gm26596_chr10_112875730 |
TGTGGACTTTTCTGAGTTCTGGTTTGTAAAGTTTCCTATTTTACTTTGTGAATAACTCTAGAATTTTATCTGTCATCCAC TTCTTCCTAAGCTATTATGCCATTCCTGAGTTTATTACCCAGAGATTCTAGCATTCTCA |
mm4_intergenic_Nnmt|Zbtb16_chr9_48622227 |
TCCTCCTTTTCCTCTCTGCCTCTCTGTTCCCCTTCTTTCTTAGTCCTCATCTTCCTGGACAGTTATACATGATGCTCCTA GTAAATCCTTGGAGGTGAGCTATGTGAACAACCCAATCCTTTCCCTGTTCC |
mm4_intergenic_Trim29|Pvrl1_chr9_43602355 |
CTGATGAGGGCCAAAGGGAGACTCTTATAGACTGGCAAATCTGTTTGGTTTTTATTTTTTATTTTCAAGGACACCTTAGA AAGAAACGGCCCCACAGACGCCTTGCCTCCTGATTGGTTGGTC |
mm4_intron_4933434I20Rik_chr8_83365788 |
GGTGCGCTGTGCTTTAAACAGAAGTAACCCCTCTTTCTGCCCCTTCTTTGTTTGCTTTCATCCTGAGTTGCTCTGCCTTA GTCTGTAGCCAAGC |
mm4_intron_Cadm2_chr16_66799343 |
TGGCTGTTGTCATATACCACATTATTGAAGCCATAGTTTTAGAAAACTTTATGAAATCTTAGAAAGAACTGGTAGAATCT GTTTGGGGTCTGCCTC |
mm4_intron_4922502D21Rik_chr6_129330169 |
GGCAGGCCATATGCTTAGACTACATGACAGCCCANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNCACATTTCAAGGTTTCTGAATTAAGCAGT |
mm4_intron_Ccdc126_chr6_49332401 |
TGCCTTCTCTCTCTTCTCCTTCCCTCTCTTTCTTAGCTGTCATTTAACTCTTCATCTGCCAGAAACACCTAGCTCGCCGT GTTCTCAGTTCTCCA |
mm4_intron_Wbp11_chr6_136824443 |
GGACCATCATGCGCTGTTTTTTGTTCTTTGGAAAACAAGAGCGAGGAAGACTACTAAGAAAGAAGCGGGCACTCCGGACA TTTTACCTTCCTTTGCCTCAAGAGT |
mm4_intron_Gm527_chr12_64918376 |
AATGCAGTGTGATCCCTGGGTATGACAGCTCAGAAAAAGGGGGTCCTGTTGGTGGAGAAACTGAGGTTGGGGAGTTTCCC AGGCTCAGTGCTACTGAAGGCGCTGGGATGGAGGCAGGTAAGAGGCAGCCCAGTA |
mm4_intron_Txnrd3_chr6_89659539 |
GACAGAGGCAGGCCATGACCCTTGGCTGCCGATTTTTTCTGGGCTGTCATCTAGTTATGACCAGATTCCCCAGGCAGGCA GGCCCTTATGTCAT |
mm4_intergenic_Ube2u|Gm12698_chr4_100524998 |
GGACTGCAGATTCCCGAGTCTGCACTGGCTTTTTATAGCCCTGTTCTTTCTTAGCTGTTACCGTCTACGTTCTCCTTGAT GTGTACAGTACCCTGCACCCATGAGGATTT |
mm4_intron_Fam114a2_chr11_57517436 |
GCTGCCTAGTGTTCTCCCTCCTCTCCTCTTCTTTTTCTGCTGCCATCTTGTCTCTCCCTCCCAATAAAACCTCTTCCACG TGAAAAAAAAAAAAAAAAAAGGTGTTGCCTAGACTCTATGGG |
mm4_intergenic_Gm12689|Gm12685_chr4_99310790 |
TCAGTGGCTCTTGTTGGCTTTTGAGAGACTTGTCCCCTTCTCTCTCAACTGTCATATTCACATTGATAGGGTCCCAGACA TGAAACCCTGTGCAAATGCCGCTATTGTAGATCAAGTACTTCATCCAAGTGGAGTTGCCC |
mm3_intergenic_Gm16190|Pnpla1_chr17_28867898 |
GGGGCCAGGGTAGAGTTCTACCTTGGAACACAATCTCCGATGACAGCAGAGAGAGAAGGGGGTGGGAGTGGGGTCGGGGG ACTGATGGCCCTGAGGTA |
mm4_intron_Cnot2_chr10_116496406 |
AGAGAAAGTGGGGATGCTGCAGAGCGCTTACTGGAATCACAGGAACGGATTCCTCGCAACAGTGGATTCAGTAGAGTGAA AGAAGACAGGTTAGAAAAATGAGGATGACTCATTTGAGACGGTTTGCTTCCA |
mm4_intron_Clec4a2_chr6_123123051 | TGAACTTTGCCTTCCCCACACTGGTGGCAGCTGAGAAAAAAGTGGGAATCCACACAATGGTGAGGGCTAATGGTCCAC |
mm4_intron_Tgm4_chr9_123046649 |
AGACTGTCTTCGTGTGGCTGCACCAGGCACACTTGATAGACCACTTCTTTCTTAGCGGCTATCAAGCAAAGGCTGTGGAG GAAAGTGGGTTCACCTCAGCTGAA |
mm4_intron_Trim38_chr13_23784783 |
GGGGAGTAGTTTGACAAGGACACGAATTCCTTTAAGTTGGTTTCTTGATGTCATCCTCAAGACCCCTCTTCTTTCCAAGC TCTGATAACTTCAATTAGTATCCTGGCCTTTTCTTTGTACCT |
mm4_intergenic_Gm23752|Gm24815_chr12_7286213 |
GCTCATGGTCTACAATTGTGCCCTATTATTTCTCTCCTTCACCTCCAAAATCATCAATGTACATAATCATATACTAAAAA ATGGGATAAGAGCATAGGAAGAAGGGGCCATCACTACCAAGCAGAATTAACA |
mm4_intergenic_Gm5839|Gm25440_chr18_48995152 |
TGTGTGCCTATAGCCGAGAGGGAAACGTTATAAAATGAACCTACTTTTCCTCTTATTTCCTATTTTAACCTCTTCTTTCT GTGATGTCCTCTATAGGATTGTCTTACCTTGATCATCCAGTATCTTCGA |
mm4_intergenic_A930031H19Rik|Gm25261_chr4_131144431 |
CTCTCCTCCTCCCGCTAAGATCTCTCCCTCCCCCTAAGATCCCCCCTTCTTTCTAAGATCTCTCCCTCCCCTCTATGATA TCTCCTTCCCCACTAAGATCTCCCCT |
mm4_intron_Gabrb1_chr5_71862817 |
TGAGTGAAGAGAGCTTGGGAAACCAGATCCCAGCTTGGAAAAAAGAGGTTATTATCTTGTGTGCCACATCATAGAGAGGG |
mm4_intron_Fzr1_chr10_81376993 |
CCATGAGAGCTAGAGCCACCAACTCCCTTTCTTTCTAAGCCCTGATCCCGAGAGCCAGAGGTGGTGTCTGTTCTGGGTGA ATCTTCACTGGGGAATCACCCTCATTCAAACAGCAGGAAGGAGCTAGGACTGGG |
mm4_intergenic_Gm21614|Gm23249_chr12_93328482 |
AAGGGGATCATCTCGTTGCATTTGAAGACAGTAAAAGCCTTTCCTCTTCTTTGTAAGCATTCATTTCATTATTCACAGGA GAAAAATTTGGGCTTTGGTTTATCACT |
mm4_intron_Degs1_chr1_182277750 |
GGGACTGTGTAATAAATGCCAGGTAGTTACTGAATAAACAGAGTTCCTCATAGGCAGACATCTTAGAAAGAACAGGAAAG GCAGGGCTCTCCAGCACTAGCGCTGTCTACAGTCTATCGACGTAACCCAGGGGA |
mm4_intron_Il24_chr1_130882788 |
CAGGGTGAGGACAAAGAGGCTACTGAGTAGTAGGTAAAGGGCCAGAGAAGAACATGGTACCTAGAACACAAGAACCTTGG ATGCCAGCTAGGAAAGATGTGGGGAACTCACTGAGCTGACATGAGCC |
mm4_exon_Rragd_chr4_33013030 |
AAGTTCTTGGCGCTCGTTTGCTTCGTCAGAGAGGAAAGCTTTGAAAGAAAAGGTAATTTTTGGTAGGGTTTAAAAGAATT GCATCTGTCGCCTGTTGA |
mm4_intron_Pde4b_chr4_102502920 |
ACCAAGACTGAGCACCAAGGCACCATGAGAGGTTAGAGAGAAGAGGGGCAATTTTCGATTAGGAATATGTGTGTCCTTTT GAAGAAGATTTGTAATCTTCAAAGGTGCATGATGTTTAGTGTGCAGAGAGCTTCCC |
mm3_intron_Dnm3_chr1_162369992 |
CCTGCTCCTCACTTCCCATGCCCCTCCTTCCTTAGCTGTCATCTCTTCACAGCGCTGCTCTCTACTGTGGCTTCTTCTCC TCCACTCCTTCCCCTCAAACCAGAGCATTTGCAGATGTGAAGGAGGCCTATGTCCTCGT |
mm4_intron_Chuk_chr19_44093008 |
GTATGTTGGGTGGTGGGGAGGGATTAAAGACAGCATAGAAATAAGAGGCTAACTAAGCGTTGCACCGCTTACACACCAAG GA |
mm4_intergenic_Sh3tc1|Ablim2_chr5_35757032 |
CTGTGCCTGTTCATGCAGTGGCAGATCCTGTATGTTCTCATTCTGGGCCCTGCGCATCCGTGCTCCCTCATCTCTCTAGG CTGTCTTCTTGTAGTCTCTTGTGCCCACCTGTTGTCACCACCGATACGAGGCAGGATC |
mm4_intergenic_Ccnd1|Tpcn2_chr7_145109620 |
AGCTGGTGGTAAGGAAAGCCCCATGGAGGTATGAGCATGTGAGGGGAGTTGCCGGAGGTGGGGAGGGGGTGTGTGGTGTG ATGTGAGGAGATGACGGCCAAGGAAGAAGGGGGCAGGGGAGGCCAGGTAGAAGGTA |
mm4_exon_Cyp2b19_chr7_26759325 |
TCCAATGTGACCCAACCACCCATGTTTCCCCTACTTTCTTAGGTGTGATCTTTTCCAGTGGGGAACGTTGGAAAACCCTT CGGCGATTCTCTCTGGCCACCATGAGA |
mm4_intergenic_Idh2|Sema4b_chr7_80182402 |
CCTGTCAAGGGCCAATACTACTTAACCCTCCCCATCTTTCTATGCTGTGCTCAACTCCTAGACATTGCTGAGCTCTGTCA CACCCTTCTCC |
mm4_intergenic_Gm11077|Pde3a_chr6_141048792 |
TCTGTGACCTGTCGACTAGATAAAAATCATATACGACATGAAATAGAAGCCAAAAATACAGTTTAGAGAAACAGACAGCA CTAACAGGAGGATGAGGGATGAGAAAGAAGAGGGTAGGGAGCCTGGAGGGGAACATG |
mm4_intergenic_Rngtt|Gm12398_chr4_33594839 |
AAAGCTCTTAGAGGCCGCTGCCCAGAGAGCAGGCCCATGGTTTTCTTCTCTCCATACTTTGTTGGATGGCATCTCAGAAA GGAGGGGCCAAATGAGAGAGCAGGGACACACAGA |
mm4_intron_Map2k6_chr11_110485237 |
GGCATGCTTGTTCTGAGTCACTGTCTTTGCCTCTGTTTTCTGAGTTGTCATCTCCCTTGACTGTTAGTAACTAGTTCAAA TTCAATTCTAAGCTAATAATTAGCAGTTTGTTTAACCTTGACAAGTCACTTGGT |
mm3_intergenic_Gm26674/Sash1|Gm9930_chr10_9355263 |
CTGAGAGCCTGCATCAAGGATCTATGCCAGACCTCTTCCTTCTGAGCTGTTATCTCTGTCCTGAAGTGCAGGTATGTTTG CAAGCAGGACTGTGTGCTCT |
mm4_intergenic_Abca5|Map2k6_chr11_110347594 |
GCAACTACAAGCCGCACAATTACAAAATGGAAAAAGAATATTCTGGAAGGACATTTTGTCCTCATTATTTCAATTTTGTT CTGTGTTTTAGACCCTCTTCTTTCTCAGCTCTCTCCCCAAACTCAAAGAGATCTTGCCT |
mm4_intergenic_Wnt4|Cdc42_chr4_137301664 |
TGACAGGGGAGGAGAGAAGGGACCCTTTAGGGCCAGGACCCCAAGGCTGGCATGGTGCCTGCTTAGAGAGAAGGGGACTA AAGGCCCAGCCCTTGTCAGCATCCCGGCCGGCACTTCGGAGGCAATTAGC |
mm4_intergenic_Gm23558|Galc_chr12_97455536 |
TGTGGGACAGATGGGGAAGAAGTGTAAGAGGAGGGATTTTACTGACTTTAGCCTAAATGATGATAGCTAAGAGATAAGAG GCAATAGCAAGGAGACAAGGAGAAAATTTGATGGGCACAGAGTGTG |
mm4_intergenic_App|Cyyr1_chr16_85198316 |
GCCATTCCTCCCACAACCTTCTGTGGAAGCAGAAACCACACCTTTTGTTCCACTTCTTTCTCAGCTCTCTGCTGTCTCCC TCAGAAGCGAGGCACTCCCTCAATAA |
mm4_intron_Egfem1_chr3_29211271 |
TGGCCTTTTCTAGGTTTAGATCAAAAAGAGTACTTTAGCCTAAACTCTTGATTACATCTTAATAAGAAGGGGAAAAAAAA TCTTCATTTAAATGAGATTAACCTGTGGGTTCTCATATGATCCT |
mm4_exon_Tbc1d9b_chr11_50168203 |
TGTGGAAGCACTGCTACAGGAGCAGCAGGAAGGAAGTGGAAATGAGGACACCCCAGAAAGAAGAGGTACAAGCCATTCCA ATTGGTGATCCCAGGGGCGGTGGGACCTTGTGCCCACCCTTGCTTGTTA |
mm4_intron_Fgfr2_chr7_130226625 |
GTCCGTCAGTCTGGGAGATGGGGGGCGGGGGGAGGTCTAAGTGACCCCCCCCCCTTTCTAAGCTGCCATACCTAATGAAA TCTTTGCTTATTTGTTAATTTTACTTATTTTAGAGTCTACCTTGCAATGCCACTGTCT |
mm4_intron_Nr3c2_chr8_77241233 |
CTCCAGTGAGGGTCCAGTGACGGAATATTCTCCTCCTCTTTCTGTGCTGTCCTCCCAGATCCCTGAACCTTTCAAAGCTT CATGTTCTCACGGATGCTTGGTCCTT |
mm4_intergenic_Vmn1r202|Gm11300/Vmn1r203_chr13_22502460 |
AATTGGACATGAGCACCGTGCCGATGCTTTCTAAGCTGTCACAGAAGCTAGCTCTTTATATCTTCCATCTCTAGATGTTT TTCCATGAAAAATCCAAACAAAGGACGAATTCATTCAGTTTCCAAGCCATGA |
mm4_intergenic_Gm11681|4933434M16Rik_chr11_112800781 |
TGCCAATAACACACCCTCCCCCCCCATCTCCACTTTTATCACACAAATTATCTCTAGACTTTTGCCAGATGTCCCTGGTG ACAGATGAGAAAGAGGAGGCTACGCTAGCTGAGAATCACATGA |
mm4_intergenic_Hs1bp3|Rhob_chr12_8389466 |
TTAGCCCAATCCCCTCATGCCTTCCCCCTTCTTAATAAGCTGTCTTTATTCCTCTTTCTAATCATGTGTCTAATCTGGTG CTTTGACCTGGG |
mm4_exon_Egflam_chr15_7316474 |
CGCAGGGACTTATCTGAACCAACCTCAGAGTAAAACACCTTAGAAAGAAGCAGAAGCCATGGTGAGAATAAAGGCAACAT TTCCCTAACATCAAAAGTTCAAAAACATTCAGAAATGGTGTGGCTATGGTGGT |
mm4_intron_Sgms1_chr19_32136134 |
AGCATAACCACTGAGGACTGAGAGGACAGCTCAGGGAGAAGAGGAGCAGGTGACAGGCCCGGGGCTCGAACCTCAGCACT GCCAAAGCAAGAAACAAAGCTTCGCAAAATGACACAGCCAGAGGGAGA |
mm4_intergenic_Pced1b|Rpap3_chr15_97591440 |
CCAGCGTTAAGGAGAGGCAACGTATCTGGGATGTGTCTTGATTCAGTCTTGATCACAATGTTGCCTGTACTTTCTAACCT GTCTTCCAAGTTAATGGCACAAGAAGGCTCAGAG |
mm3_intron_Rftn1_chr17_50117690 |
GACCTGCCTGACACTCAACACTTGTGGTAGAGACCCAAGGTTCCCTAGTCCTTCCTCTTCTTCCTCAGCTGTCCTCGGCT GTTCCTTCCAGCCTGTCCCCTCCCTCCCTATC |
mm4_intergenic_Gm9931|Gm22966_chr1_147771121 |
GAGCAAAGCACAGAGGACCAGCTTAGTTCAGTCAGCCCTATGGTGCTAAGTTATTCACACCTCATTGTTTACATGACAGC AGAGAAAGAGGAGGGAACAAGACCCCAATCAGACATCAGT |
mm4_intron_Lmna_chr3_88487775 |
TGAGCAGCATGAGAGAGCAGAGTTGCAGAGAGGAGAGCTTGGAAAGTAGCGGACACTGCACACACAGGCAGCACACCTAG GTA |
mm4_intron_Hs6st3_chr14_119437068 |
TCTGCTTGTCTGGAGATATGCTAAAATTTGTAGCATGCCAACTTAGAAATAAGTGGTTCAAGTTAAATATCTTCCCTTCC ATTTAGGACACTGAATCCTTTCTTTAAAGCCCTTACCTTTGCATGA |
mm4_intergenic_Zfp217|Gm17619_chr2_170171745 |
GCTAGCTAGCCTGACGTGGGCGGTGAAAGCTTAGAAACTAGAGGCTGCTGANNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNCCTGAATCTAATTCTCAAACCATGTAAGATGGTGTCCATTGAC |
mm3_intron_Clstn2_chr9_97484615 |
GCTCTGTTTTGCCCTTCCCTTTCTCTTGTGAAGTGCTGACATCTCAGAAAGAAGGAGCAAAAGCAGCTCTCTCCTTGTTG TAGGTATTCGGTTCCAGTGGTGCAAAAG |
mm4_intergenic_Gm14453|Rbm38/Gm14453_chr2_173028054 |
TAATGGATGGCCTTGGCCTTGGAGGAGGCCATCATAGAGGACAACTTTGAAAGTAGCGGTGGAGTTTAGGCAGGTTCAGG TGGG |
mm4_intron_Tceal3_chrX_136641913 |
CGTCCTGTGCACATTTTCCCCTTCTTTAATCTTTGAAGGATAAAATTGTCCTATTCACGTCAAGTGATTACAACCTACAA AGAAGGGGGGGGGGCAAATAGAACCAAATGCCTTGTCAAGACCTGAGG |
mm4_intergenic_Gm13529|9430024E24Rik_chr2_33679589 |
CTGTGCCCCAGAGAGGACTGTGCCTCTTCTTTATAAGCTGACAAATCTCAGGCAGACTAGGAGGGGCCATGGGGAAAGCT GTGGCTCCTGCCTCTGCTGTCATGAA |
mm4_intron_Smg6_chr11_74973363 |
GCGCTCACGAGAACCTTTTGTCTGCCTCCCTGCCTGAAGACAGCCAAGACAGAAGGGGTTTCGGCTCCCCTACTATTTGA GTAAATGGGCATGAGAGTTCCCAGAC |
mm4_intron_Dmd_chrX_85070940 |
TGTTCTGTTCATTGATGCCATCCCCCTTCTTACTAAGCTGGAAGCTTTTTCTTTCCTTTTGTTGTAGAGAATCTGACTGA TAGATTGTGAGTAAAGCTTTCATTCTGTGAAAAATGATCTTGGGGCCTGT |
mm4_intergenic_Fat4|Gm9845_chr3_39270164 |
TGTCAGAGGAAAACAGTAGCAGAGTAATATGGAGATGACAACTGAGATAAAAGGGGGCTAAAATACATTTTAAACTGTAT TTTAAGAGAGCTACAAATGATAGTAGGCTGGAAAACAAAAGGAAACC |
mm4_intergenic_Minpp1|Papss2_chr19_32553769 |
CAGCAGCTTCAAGGTCTCCAGCCTCTCCTTTCCACGCTGTCCTCGGTGTGGCAGTCATAACTCATGGCTACACAATAGTC TCTACCATTATGTCCTCCCAGGGCAGCATGAGAGAGAG |
mm4_intergenic_2810032G03Rik|Gm24758_chr12_5572747 |
ACCTGGGACCATGCGATTTTCCTTTGCTTTCTCAGCTGTCATAGACTTGAGGAGTATTTCTTAGTATGTGCATAGGAGAC ATCTTCCTTAGGCAGATATCTCCTGAGCCTGAGGGG |
mm4_intergenic_Gm23185|Gm23848_chr15_49464083 |
GAATTCCTGTTGGCTGTGGCAGATGACAGTTTAGCAAGGAATGGGGAAACTGAATTTTATGAAAAACAAGATACTTGAGT CATTGTGTTTCTGAAAAATACCGTGGATTACATTTGTGTCTCCTCATGGCCTTC |
mm4_intergenic_Tec|Gm9870/Slain2_chr5_72874143 |
GGACCCCTGAGGAGAAGAGAGACCCACACAGCTCCTTAATTCTCTCCTGTTCTTTCTAACCTGTAATGGTGGACCAAGAC AAAGATTGTAATATTGAGTTGCTGGAAATGGATCCA |
mm4_intergenic_Gm11675|Gm11676_chr11_111305027 |
TCTCCTGAAACCATTTCTTCTCTTTAGAGGAGCTCTTAGAAAGAAGTGGAAAGTAGTCATACCACTCAATATAAATGTAT CTCGTAATAGATGTTAATGGATAGCAAATATGAAAGAGGGGGGGAAAGATGGTCAGAAGG |
mm4_intron_Cdhr2_chr13_54711623 |
CTGTGTGGACAGGAAGTGGCCCTGGAGGTCAGCTTGGAAAGTAGGGGGGCAGAGATCTTGCTGAAAAGGGATGGTAGGGC AGAGT |
mm4_intergenic_Gm12122|Slit3_chr11_35497097 |
TGACAGTGTCAGCTACGACAATCAAATTAGGGATGAAAGCCTCGGATGACTGCCAAGAAAGAGGCGGAGAAGAAGGGGGT GGGGAACTCAGGGGAGGGAAGATTGC |
mm3_intergenic_Gm23681|Peli1_chr11_21038506 |
CCTCACCTGGCACTATAGGCTGAATCTCCCCTCACCATCTGATGTCAGCTTAGAAAGCAAAGGAGACTTGAGACTCAAAT GGAAAAGAGAAACATGCCTGTGAGCCATAGAGACGATAATCCTGTCAGTCTGGAGTGGT |
mm3_intergenic_Gm25258|Hao1_chr2_134200629 |
ACAGAGACCATTTGACACCCTATGTCCACAGGTACACTACTTCTTTCTTAGCTGTAATTAAAGATTCCTGCCTGAAGTTT CAGCAATATGGTGCCCTCCACTGAACTGTGAA |
mm4_intron_Tmod1_chr4_46055730 |
CTGGGCACAGTTTGAAAGCCACCTATTCGATCCGTTTCTGCTGTTGATGACAGCTCAGTAAACAGAGGCCTTAAGAATTT AATAATGGTCACCGTGGCAATTAACATCAAAACTGACTCTCCAACCAGGTGG |
mm4_intron_Sorcs3_chr19_48738709 |
TGAGAAATGGCTCGGAGGATTCATTTATTTTGTTCCTGTGGTTAGGAGAACTTCCTTGGGAAACCAAAGGCCAGGCCACC TCTTTCCAGGCAGTCATCTATATTTATGTATGAGGTGTCTACTATTTTCAAGGT |
mm4_intron_Lrrc8b_chr5_105416448 |
TCGGTGGTTCCTCCTCCTAGGTTGCAGGTGCTGACAGGTCAGAAGGAAGAGGCTCGGTAATCCGTGTCCTCAACTGACTT CCCAAAGTCCGTAGGTTGC |
mm4_intergenic_Gm23152|Gm25265_chr2_166674988 |
CCACCTCAGAGTTGTAGCCCTGGGCTCAGCTCACAAAGCTGTGACCTGGGGGTGAGGACAGGGTAGAAAGGAGAGGGCTC AGCCTCAGACTGGGACAAG |
mm4_intergenic_Cdk12|Mir5119_chr11_98255101 |
AGAAGATTCCTGCAGCCCAGGTTGGAAGACGCCTGTGGGGTCACTGTGGGGTCCCTGGTGCTGCCCATCCTTCCTCTCCT TGCTAAGCTGTCACTCCCTGTCCACCCACTTCCTTT |
mm4_intergenic_Atp1a1|Mab21l3_chr3_101694488 |
GGCTTGGTCTCTGACACACAGGAACACATGGTGCCAACTAAGCAGATCACACTACCCTCCCCACCTGGAGAACAGCCTAG AAATAAGTGGGCTGTATGGTGAAGAGCCCACACTG |
mm3_intergenic_Gm9931|Gm22966_chr1_147391084 |
CCCTCAGAATACTGTGTGAGACATACTGTTCTGGATTTCTGCTTAGAAAGAAGTGGTAAAAGTACATGCTTGCTAAAGGA GTAGACA |
mm4_intron_St5_chr7_109592153 |
GGATCGAGCGTGCAAGAGTATCAGCCTGAGCAAAGCATATCTAGTTATACCAATCACCTCATCTTTGAAAGCTGTCAACT AGATCTCTCCTGCTCCACAGC |
mm4_intergenic_Gm13216|Camk1d_chr2_5648683 |
GGGACTCTAAACCCATGGGCAGGTAGCAACTCAAGCTCAGAAAGAAGACAGATTAGCAAGGAGGGGGGAGAATATCAAAC AGGATTAAGTATAGAAATTCCAAAGGCCTGTTTTGTGAAAGCT |
mm4_intergenic_Gm22385|Snx18_chr13_113552661 |
CCTGCTGAGGACAGTCTAGCAAGGTGAAGACAGCTCAGACAGGAGGGGAAAGGTATACTCTTTAGTTTTAAAGGCTAAAA CTGGGGGGATCCAATAGAATCAGAGGAAGGTTCTCAACTGT |
mm4_intron_Zmat4_chr8_23922806 |
CTGGGAGCTGGTGATGGAAGTCTGTAATGACCCCTTGCTTTCTCAGCTGCCATCTTGTGGTGCCACTTGATGATCTGGTA GAACTTTCTGTTGGCTTCCTTGGAAAACCTGC |
mm3_intron_Cpvl_chr6_53946004 |
CCTGATAGAGGGACTGAATGTGATTTGATACTGAGCAACTGAGTATTAAAAAAAATATATGGAATGCTAAACCATCTTCT CTGACAGCTTAGAAAAAAGGGAAGACAGGCTCAAGAAATTCCTGTCTCACGAACTCGC |
mm4_intron_Abca13_chr11_9505415 |
CTTCCCTGAGCACCTTGGTCCATCTCTGTTATGTGTCATAAGATTCCTTCAGGTACTCCAGCAGTATTCCTGCTTTCCCC CCCTTCCTAAGCTGTCAACAGACATCCCTGTTGACACACTGGCTGCCTTATGGA |
mm4_intron_Cage1_chr13_38017468 |
CGTGGCAAGGTCCTAAGGATAATGGTTTGAGAAACTAGATTGAAAGGTTTTCACTGAAGCTAAAACGGAGGAGGAGGACT GTTTAGAAATAAGGGGCCAAAGAAGGTAAACCACACTGAATCCCATGCT |
mm4_intergenic_4930547M16Rik|2010001E11Rik_chr10_39909133 |
AGAAACGCCAGCAGCTAGTCCCACTAGAACAATGGTGGGCCTTTACTCACAGACGATGAGAGCCTAGGAAGAGGAGGAGG GAACAGTTCCAAAGAAGGGCAGAGCTG |
mm4_intergenic_Tars|Npr3_chr15_11470390 |
GGGGAGGGAGCACACATAACTTTTTTTTTTTTTAAGCAAACTTGCTGGCTTTTATTTGACCATTTCACCCCTTCCTACTA AGATGTCTTCATCTTGTCCTCAAAGGTGCTGGA |
mm4_intergenic_Gm23249|Gm9726/mmu-mir-8099-2_chr12_93827295 |
GCCGACTCCTTGAAAGTTGCTTAATTTGGCAGAATGCTAACAGTTATTTTTTCCAAAGGATATAGGAGGAGAGCTTGGAA ATAAGAGGTTTAATGGGAAGGTTACACCAAAGA |
mm4_intergenic_B130011K05Rik|Gm12287_chr11_63535759 |
TCAGTGCACTTTGAGCCAGAGATTCCATTCAAAAATTTCTCTAGATCTAAGCTATTCTGTTCTGTTTTAAATACACCCCC TTTCCTCCTGTTCTTTCACAGCTGTCTTCTTCTTTCCTTCCACCACCTGTCTCC |
mm4_intergenic_Gm25736|Tmeff2_chr1_51033739 |
GACAAGCCCACACTTTTCACCTTAGGATTTTCAAGTATGACAGCTTATGCAGAAGTGGTAAAGAAGACCTGACTGGGTCT GGTGTATGCATCG |
mm4_intron_Col23a1_chr11_51294879 |
AAGGGAGTTTGAGACCTGGCCCTGATCTTTATAAGCTCTCATCTGACTTTTGCAAACTCCTTCCCTAAAGCCTCCCTTTT CTAATGCAGTCATCTGACAGCACAGTAATGAGAGTGAGCAAGCCAATACCCAGAGC |
mm4_intergenic_Ctnna3|Gm22829_chr10_66114373 |
GAGCATGTGTGTGGGAGTCAGGCACTATATTGCATAGACTATGGTACAGATGAAAGGAAGTTCACGCAGTTTGTAGACTC CCATGACAGCCTAGAAAGACCAGGGGTTGCAAGAGAACGTGGGA |
mm3_intron_Robo1_chr16_72890665 |
AGACCTTTTCAACTGTTCAAGTGAACCATCACTTCTTTCTGAGCTGTCACTCTCGACCATTTATGTCATAGTTTATCTTG CTTACAAAAAGCACAGTTATCTATGGAAAAACCACACCACAAACAGCTTCC |
mm4_intergenic_Fam173b|Tas2r119_chr15_32111432 |
AGAGTCCATGGCAGTTGCTCCCTGCCCATCCCTGCTTCCATTCCCTCCCTGCTACTCTTAATCAGGTGCCCTCTTGTTTC TAAGGTGTGGTCCTCGCCCCAGTGGGTGGGTTACTTCA |
mm4_intergenic_E030013I19Rik|Fam188a_chr2_12329309 |
AAGCGAGCCTGCCTTCAGCACTTGTCCTCTTCTGTCACATCTGTCATCCATGCAGCTGGCAGCCCCCATGAGACTTGGGT ATTAAAAGAACCATAAAATAATTCATTTTTTTTCTCACCAAAGGTTTTAGACACACA |
mm4_intergenic_Gm9897|Fzd1_chr5_4650311 |
AAACTGTTGAACGTGGCAGCGATCAGACTTGACAGTGTTTCAGCAAACTTAACAAAACCCAAATGGCCTCAGAATTCCAC AGCCCTCTTCTGTGTAACCAGTCATCACAGTTGGCAGGCCAGAACT |
mm4_exon_Gm4890_chr8_79306469 |
TGCAGCAAACTGGAGCCTTAGCAAAAGGCTGCTCGCTAGCATGAGAAGCATTTGATTCCAGCTTGGAAACAAGGGGTGGG GCAAAGCCTTTTTACCACCTCCACCCCATCT |
mm4_intergenic_Il10rb|A930006K02Rik_chr16_91436660 |
GTAGTCCTTGTGGTGGTTCCAAACTCCAAACCACCCCTATCTAAGTTGTCATCCAAAACCTCAGGGCAACCCTTATGGGT CACAAAACCCAAAAAGGATCTATCACTAACAAGAGACAGCAGGAACAATGGCC |
mm4_intron_Pde4d_chr13_108802917 |
TGCCAGCCTAGAATGTGACTAATAGAAATAAATAATCAGAGGGAATTTATTAAACAGACTGACTTGAAGAGAGTCCCCCT TCCCTATAAGCTGTCTTCAACTCTACTGTCAGAGTAGCTCATTTTGGT |
mm4_intron_Vps13d_chr4_145135645 |
AAAAGTGTGGCTCTCTGGGGCTGCAGCAAAGCTGACTCCTCAGCTTTGAAAAAGTTGAAAAGCCACAGCCTCTGCTTTCT GAGCAGTAATCAAAACGATCAGTAGTGCAAACTTCCTGCA |
mm4_intergenic_Def6|Ppard_chr17_28229538 |
CGGCCCCACGTTTAGTAAGTCACTACCCCTGTGGTGCTATGACCAGAGGCCACTGCCTTCTAACCTGTCAGCTCCTAGTT AACTAAGAGCTTCCCGGACTCCCTTCTAATTCTGCTGCCCGGATGG |
mm4_intergenic_Clic5|Runx2_chr17_44358764 |
GGAGCACAACAGCTGGAACTAACTCACATCCTGATGACTGCTTCTGAAGAAGGGGCTGGTGGAGTGCTCCGACCTGGGGC TTTGTTTCACTTTGCTGTGGTGCTCCCTA |
mm4_intergenic_Pdgfc|Gm22531_chr3_81496345 |
TGCTGTGATGGAACCAGCAAGAGTTGTAAAACAAACTGTGATTTCTTTTGAAGATGACAGCTTATGAATGAGTGGTCATA GGCCAAAAGGATGACTCTGGA |
mm4_intron_Prlr_chr15_10306078 |
ACTGTGGCAGGTTCTGGATCCTTTTCCTTCTCTTGTGAGGGACTCTCAATATCCTCACTGAAGTGGTAAAGAAAAGTACA ACTTAGAAAGAAGAGATAATTTTGACATATTCTTGGGGTGAATTTCTTGTTGGAC |
mm4_intron_Atp2c1_chr9_105436451 |
AGCAGGCAAGCAGTACTTCTTTCTCTCCTTTTTCTAGAAAGCTGCTTTCTTCAGTCTTCCTCTCTTGTCCCTTCTTTCTA AGTTGAGATGTGAGGGCCTTTTGCACTAATGAATCAGGAACTCCCCTTAACCCACC |
mm4_intergenic_Zcchc6|Gas1_chr13_59982885 |
AGGAGGTGACCAGGGCTAAATCTCAAAGGAAGAAACAAGGGGTTTTGGTGACAGCTTAGATGGCAGGGGAAGTAGTACAT GAGCTAAAAACACTTCTGGGTCCCAGGTTTTATTTCCAAGGAAGTTGGGAGAGGAGACC |
mm4_intron_Pdzd2_chr15_12433998 |
ACACCCCAGAAACCAGGTTGGTTTCTACTAACCTCAAGTGTGTCTACTCCCCTTGGAGACCCCTTCATTATAAGCTCTCA TTTACAGGGCACGGCATTCACTTTTTCTATGCGACCGCCCAGATGTTTACT |
mm4_intron_Gm7942_chr5_95108284 |
GAGTCTGCCATGATGCCACTGTGGGGGACTGTCTTTCTATGACCTCTTAGAATGAAGAGGTAAATTGATGTCTCTACCAT TGCATGAGCAGTAACTCAGAAGC |
mm4_intron_AC140365.1_chr5_JH584299_random_717643 |
GAGTCTGCCATGATGCCACTGTGGGGGACTGTCTTTCTATGACCTCTTAGAATGAAGAGGTAAATTGATGTCTCTACCAT TGCATGAGCAGTAACTCAGAAGC |
mm4_intergenic_Gm6205|Gm3183_chr5_94778044 |
GAGTCTGCCATGATGCCACTGTGGGGGACTGTCTTTCTATGACCTCTTAGAATGAAGAGGTAAATTGATGTCTCTACCAT TGCATGAGCAGTAACTCAGAAGC |
mm4_intergenic_GM6367|AC123873.1_chr5_JH584299_random_90346 |
GAGTCTGCCATGATGCCACTGTGGGGGACTGTCTTTCTATGACCTCTTAGAATGAAGAGGTAAATTGATGTCTCTACCAT TGCATGAGCAGTAACTCAGAAGC |
mm4_intergenic_AC126035.1|Gm16367_chr5_JH584299_random_396846 |
GAGTCTGCCATGATGCCACTGTGGGGGACTGTCTTTCTATGACCTCTTAGAATGAAGAGGTAAATTGATGTCTCTACCAT TGCATGAGCAGTAACTCAGAAGC |
mm4_exon_Icam5/Gm26592_chr9_21037130 |
GATTCACGGACGGTCACTGTGGGTGTGGAATGTGAGTGAGGACAGCGCAGAATGAAGAGGACTGAGCCCGCTAGAAAAGT GCCGTGA |