LMP-2B NC_007605.1 + 169293 169448 169448 169448 1 169293, 169448, 0 LMP-2B none none -1, YP_401720.3 NC_007605.1 - 166539 166836 166539 166836 1 166539, 166836, 0 BNLF2b cmpl cmpl 0, YP_401721.1 NC_007605.1 - 166845 167028 166845 167028 1 166845, 167028, 0 BNLF2a cmpl cmpl 0, rna-HHV4_LMP-1 NC_007605.1 - 166482 169056 167701 169016 3 166482,168583,168748, 168507,168670,169056, 0 LMP-1 cmpl cmpl 1,1,0, LMP-2A NC_007605.1 + 166039 166458 166458 166458 1 166039, 166458, 0 LMP-2A none none -1, YP_401719.1 NC_007605.1 + 165045 165711 165045 165711 1 165045, 165711, 0 BARF1 cmpl cmpl 0, YP_401718.3 NC_007605.1 - 164396 164945 164396 164945 1 164396, 164945, 0 BALF1 cmpl cmpl 0, YP_401717.1 NC_007605.1 - 160925 164312 160925 164312 1 160925, 164312, 0 BALF2 cmpl cmpl 0, YP_401716.1 NC_007605.1 + 159120 160536 159120 160536 1 159120, 160536, 0 BARF0 cmpl cmpl 0, YP_401713.1 NC_007605.1 - 156290 158864 156290 158864 1 156290, 158864, 0 BALF4 cmpl cmpl 0, YP_401715.3 NC_007605.1 - 158850 160908 158850 160908 1 158850, 160908, 0 BALF3 cmpl cmpl 0, rna-HHV4_A73 NC_007605.1 + 155548 160531 156651 159865 4 155548,156845,158624,159780, 156737,156928,158751,160531, 0 A73 cmpl cmpl 0,2,1,2, YP_401712.1 NC_007605.1 - 153240 156288 153240 156288 1 153240, 156288, 0 BALF5 cmpl cmpl 0, YP_401708.1 NC_007605.1 - 149034 150324 149034 150324 1 149034, 150324, 0 LF2 cmpl cmpl 0, YP_401709.1 NC_007605.1 - 150284 151694 150284 151694 1 150284, 151694, 0 LF1 cmpl cmpl 0, YP_401711.1 NC_007605.1 - 151702 152641 151702 152641 1 151702, 152641, 0 BILF1 cmpl cmpl 0, YP_401707.1 NC_007605.1 - 140569 143344 140569 143344 1 140569, 143344, 0 LF3 cmpl cmpl 0, rna-HHV4_RPMS1-40 NC_007605.1 + 152782 152806 152806 152806 1 152782, 152806, 0 RPMS1 none none -1, rna-HHV4_RPMS1-39 NC_007605.1 + 152746 152768 152768 152768 1 152746, 152768, 0 RPMS1 none none -1, rna-HHV4_RPMS1-38 NC_007605.1 + 148777 148799 148799 148799 1 148777, 148799, 0 RPMS1 none none -1, rna-HHV4_RPMS1-37 NC_007605.1 + 148743 148765 148765 148765 1 148743, 148765, 0 RPMS1 none none -1, rna-HHV4_RPMS1-36 NC_007605.1 + 148562 148585 148585 148585 1 148562, 148585, 0 RPMS1 none none -1, rna-HHV4_RPMS1-35 NC_007605.1 + 148525 148547 148547 148547 1 148525, 148547, 0 RPMS1 none none -1, rna-HHV4_RPMS1-34 NC_007605.1 + 148373 148395 148395 148395 1 148373, 148395, 0 RPMS1 none none -1, rna-HHV4_RPMS1-33 NC_007605.1 + 148338 148359 148359 148359 1 148338, 148359, 0 RPMS1 none none -1, rna-HHV4_RPMS1-32 NC_007605.1 + 148253 148274 148274 148274 1 148253, 148274, 0 RPMS1 none none -1, rna-HHV4_RPMS1-31 NC_007605.1 + 148214 148237 148237 148237 1 148214, 148237, 0 RPMS1 none none -1, rna-HHV4_RPMS1-30 NC_007605.1 + 147935 147957 147957 147957 1 147935, 147957, 0 RPMS1 none none -1, rna-HHV4_RPMS1-29 NC_007605.1 + 147574 147595 147595 147595 1 147574, 147595, 0 RPMS1 none none -1, rna-HHV4_RPMS1-28 NC_007605.1 + 147536 147560 147560 147560 1 147536, 147560, 0 RPMS1 none none -1, rna-HHV4_RPMS1-27 NC_007605.1 + 147355 147378 147378 147378 1 147355, 147378, 0 RPMS1 none none -1, rna-HHV4_RPMS1-26 NC_007605.1 + 147320 147342 147342 147342 1 147320, 147342, 0 RPMS1 none none -1, rna-HHV4_RPMS1-25 NC_007605.1 + 147202 147225 147225 147225 1 147202, 147225, 0 RPMS1 none none -1, rna-HHV4_RPMS1-24 NC_007605.1 + 146996 147019 147019 147019 1 146996, 147019, 0 RPMS1 none none -1, rna-HHV4_RPMS1-23 NC_007605.1 + 146958 146980 146980 146980 1 146958, 146980, 0 RPMS1 none none -1, rna-HHV4_RPMS1-22 NC_007605.1 + 146806 146829 146829 146829 1 146806, 146829, 0 RPMS1 none none -1, rna-HHV4_RPMS1-21 NC_007605.1 + 146771 146793 146793 146793 1 146771, 146793, 0 RPMS1 none none -1, rna-HHV4_RPMS1-20 NC_007605.1 + 146474 146496 146496 146496 1 146474, 146496, 0 RPMS1 none none -1, rna-HHV4_RPMS1-19 NC_007605.1 + 146438 146460 146460 146460 1 146438, 146460, 0 RPMS1 none none -1, rna-HHV4_RPMS1-18 NC_007605.1 + 145997 146019 146019 146019 1 145997, 146019, 0 RPMS1 none none -1, rna-HHV4_RPMS1-17 NC_007605.1 + 145547 145569 145569 145569 1 145547, 145569, 0 RPMS1 none none -1, rna-HHV4_RPMS1-16 NC_007605.1 + 145513 145534 145534 145534 1 145513, 145534, 0 RPMS1 none none -1, rna-HHV4_RPMS1-15 NC_007605.1 + 140071 140093 140093 140093 1 140071, 140093, 0 RPMS1 none none -1, rna-HHV4_RPMS1-14 NC_007605.1 + 140032 140054 140054 140054 1 140032, 140054, 0 RPMS1 none none -1, rna-HHV4_RPMS1-13 NC_007605.1 + 139952 139975 139975 139975 1 139952, 139975, 0 RPMS1 none none -1, rna-HHV4_RPMS1-12 NC_007605.1 + 139914 139936 139936 139936 1 139914, 139936, 0 RPMS1 none none -1, rna-HHV4_RPMS1-11 NC_007605.1 + 139794 139818 139818 139818 1 139794, 139818, 0 RPMS1 none none -1, rna-HHV4_RPMS1-10 NC_007605.1 + 139716 139734 139734 139734 1 139716, 139734, 0 RPMS1 none none -1, rna-HHV4_RPMS1-9 NC_007605.1 + 139674 139698 139698 139698 1 139674, 139698, 0 RPMS1 none none -1, rna-HHV4_RPMS1-8 NC_007605.1 + 139552 139574 139574 139574 1 139552, 139574, 0 RPMS1 none none -1, rna-HHV4_RPMS1-7 NC_007605.1 + 139386 139408 139408 139408 1 139386, 139408, 0 RPMS1 none none -1, rna-HHV4_RPMS1-6 NC_007605.1 + 139350 139374 139374 139374 1 139350, 139374, 0 RPMS1 none none -1, rna-HHV4_RPMS1-5 NC_007605.1 + 139265 139288 139288 139288 1 139265, 139288, 0 RPMS1 none none -1, rna-HHV4_RPMS1-4 NC_007605.1 + 139227 139249 139249 139249 1 139227, 139249, 0 RPMS1 none none -1, rna-HHV4_RPMS1-3 NC_007605.1 + 139123 139145 139145 139145 1 139123, 139145, 0 RPMS1 none none -1, rna-HHV4_RPMS1-2 NC_007605.1 + 139086 139107 139107 139107 1 139086, 139107, 0 RPMS1 none none -1, rna-HHV4_RPMS1 NC_007605.1 + 138351 160531 150322 155552 7 138351,149580,149922,150236,155266,156845,158624, 138480,149712,150077,150348,156737,156928,160531, 0 RPMS1 cmpl cmpl -1,-1,-1,0,2,-1,-1, YP_401706.1 NC_007605.1 - 137489 138236 137489 138236 1 137489, 138236, 0 BILF2 cmpl cmpl 0, YP_401705.1 NC_007605.1 + 136417 137455 136417 137455 1 136417, 137455, 0 BdRF1 cmpl cmpl 0, YP_401704.1 NC_007605.1 + 135637 137455 135637 137455 1 135637, 137455, 0 BVRF2 cmpl cmpl 0, YP_401726.1 NC_007605.1 - 134808 135627 134808 135627 1 134808, 135627, 0 BVLF1 cmpl cmpl 0, YP_401703.1 NC_007605.1 + 133126 134839 133126 134839 1 133126, 134839, 0 BVRF1 cmpl cmpl 0, YP_401702.1 NC_007605.1 + 132570 133317 132570 133317 1 132570, 133317, 0 BXRF1 cmpl cmpl 0, YP_401700.1 NC_007605.1 - 128626 130747 128626 130747 1 128626, 130747, 0 BXLF2 cmpl cmpl 0, YP_401701.1 NC_007605.1 - 130748 132572 130748 132572 1 130748, 132572, 0 BXLF1 cmpl cmpl 0, YP_401699.3 NC_007605.1 + 127415 128630 127415 128630 1 127415, 128630, 0 BTRF1 cmpl cmpl 0, YP_401698.1 NC_007605.1 + 125176 127429 125176 127429 1 125176, 127429, 0 BcRF1 cmpl cmpl 0, YP_401697.1 NC_007605.1 - 121032 125178 121032 125178 1 121032, 125178, 0 BcLF1 cmpl cmpl 0, YP_401694.1 NC_007605.1 - 118073 118778 118073 118778 1 118073, 118778, 0 BDLF3 cmpl cmpl 0, YP_401695.1 NC_007605.1 - 118838 120101 118838 120101 1 118838, 120101, 0 BDLF2 cmpl cmpl 0, YP_401696.1 NC_007605.1 - 120111 121017 120111 121017 1 120111, 121017, 0 BDLF1 cmpl cmpl 0, YP_401691.1 NC_007605.1 - 113574 114585 113574 114585 1 113574, 114585, 0 BGLF2 cmpl cmpl 0, YP_401692.1 NC_007605.1 - 114562 116086 114562 116086 1 114562, 116086, 0 BGLF1 cmpl cmpl 0, YP_401693.1 NC_007605.1 - 116055 116733 116055 116733 1 116055, 116733, 0 BDLF4 cmpl cmpl 0, YP_401725.1 NC_007605.1 - 116711 116945 116711 116945 1 116711, 116945, 0 BDLF3.5 cmpl cmpl 0, YP_401690.1 NC_007605.1 + 112649 118063 112649 118063 2 112649,116926, 113585,118063, 0 BGRF1/BDRF1 cmpl cmpl 0,0, YP_401686.1 NC_007605.1 - 108458 108686 108458 108686 1 108458, 108686, 0 BBLF1 cmpl cmpl 0, YP_401687.1 NC_007605.1 - 108640 110053 108640 110053 1 108640, 110053, 0 BGLF5 cmpl cmpl 0, YP_401688.1 NC_007605.1 - 110036 111326 110036 111326 1 110036, 111326, 0 BGLF4 cmpl cmpl 0, YP_401724.1 NC_007605.1 - 111204 111666 111204 111666 1 111204, 111666, 0 BGLF3.5 cmpl cmpl 0, YP_401689.1 NC_007605.1 - 111652 112651 111652 112651 1 111652, 112651, 0 BGLF3 cmpl cmpl 0, YP_401685.1 NC_007605.1 + 106848 108066 106848 108066 1 106848, 108066, 0 BBRF3 cmpl cmpl 0, YP_401684.3 NC_007605.1 - 104492 106750 104492 106750 2 104492,105226, 105098,106750, 0 BBLF2/BBLF3 cmpl cmpl 0,0, YP_401683.1 NC_007605.1 + 103659 104496 103659 104496 1 103659, 104496, 0 BBRF2 cmpl cmpl 0, YP_401682.1 NC_007605.1 + 101915 103757 101915 103757 1 101915, 103757, 0 BBRF1 cmpl cmpl 0, YP_401681.1 NC_007605.1 - 99541 101971 99541 101971 1 99541, 101971, 0 BBLF4 cmpl cmpl 0, YP_401680.1 NC_007605.1 + 98845 99499 98845 99499 1 98845, 99499, 0 BKRF4 cmpl cmpl 0, YP_401679.1 NC_007605.1 + 98064 98832 98064 98832 1 98064, 98832, 0 BKRF3 cmpl cmpl 0, YP_401678.1 NC_007605.1 + 97669 98083 97669 98083 1 97669, 98083, 0 BKRF2 cmpl cmpl 0, YP_401676.1 NC_007605.1 + 94013 95627 94013 95627 1 94013, 95627, 0 BRRF2 cmpl cmpl 0, YP_401675.1 NC_007605.1 + 92893 93826 92893 93826 1 92893, 93826, 0 BRRF1 cmpl cmpl 0, rna-HHV4_BZLF1 NC_007605.1 - 89837 90906 89921 90867 3 89837,90137,90366, 90053,90242,90906, 0 BZLF1 cmpl cmpl 0,0,0, BRLF1 NC_007605.1 - 92637 92897 92897 92897 1 92637, 92897, 0 BRLF1 none none -1, YP_401672.1 NC_007605.1 - 89156 89828 89156 89828 1 89156, 89828, 0 BZLF2 cmpl cmpl 0, YP_401668.1 NC_007605.1 - 77278 77725 77278 77725 1 77278, 77725, 0 BLLF2 cmpl cmpl 0, YP_401667.1 NC_007605.1 - 77141 79865 77141 79865 1 77141, 79865, 0 BLLF1 cmpl cmpl 0, YP_401666.1 NC_007605.1 + 76636 77125 76636 77125 1 76636, 77125, 0 BLRF2 cmpl cmpl 0, YP_401665.1 NC_007605.1 + 76258 76567 76258 76567 1 76258, 76567, 0 BLRF1 cmpl cmpl 0, YP_401664.1 NC_007605.1 - 75349 76186 75349 76186 1 75349, 76186, 0 BLLF3 cmpl cmpl 0, YP_401663.1 NC_007605.1 + 74635 75292 74635 75292 1 74635, 75292, 0 BSRF1 cmpl cmpl 0, YP_401659.1 NC_007605.1 - 70454 72000 70454 72000 2 70454,71939, 71833,72000, 0 BSLF2/BMLF1 cmpl cmpl 1,0, YP_401662.1 NC_007605.1 - 71968 74593 71968 74593 1 71968, 74593, 0 BSLF1 cmpl cmpl 0, YP_401658.1 NC_007605.1 + 68829 69903 68829 69903 1 68829, 69903, 0 BMRF2 cmpl cmpl 0, YP_401657.1 NC_007605.1 + 67610 68825 67610 68825 1 67610, 68825, 0 BMRF1 cmpl cmpl 0, YP_401656.1 NC_007605.1 + 66611 67520 66611 67520 1 66611, 67520, 0 BaRF1 cmpl cmpl 0, YP_401655.1 NC_007605.1 + 64118 66599 64118 66599 1 64118, 66599, 0 BORF2 cmpl cmpl 0, YP_401654.1 NC_007605.1 + 62949 64044 62949 64044 1 62949, 64044, 0 BORF1 cmpl cmpl 0, rna-HHV4_EBNA-1.2 NC_007605.1 + 50133 97654 95661 97587 3 50133,55189,95653, 50170,55361,97654, 0 EBNA-1 cmpl cmpl -1,-1,0, YP_401652.1 NC_007605.1 - 49789 59239 49789 59239 1 49789, 59239, 0 BPLF1 cmpl cmpl 0, YP_401653.1 NC_007605.1 - 59231 62951 59231 62951 1 59231, 62951, 0 BOLF1 cmpl cmpl 0, YP_401651.1 NC_007605.1 + 49218 49749 49218 49749 1 49218, 49749, 0 BFRF3 cmpl cmpl 0, YP_401650.1 NC_007605.1 + 47519 49295 47519 49295 1 47519, 49295, 0 BFRF2 cmpl cmpl 0, YP_401649.1 NC_007605.1 + 46602 47613 46602 47613 1 46602, 47613, 0 BFRF1 cmpl cmpl 0, YP_401728.1 NC_007605.1 + 46235 46643 46235 46643 1 46235, 46643, 0 BFRF1A cmpl cmpl 0, YP_401647.1 NC_007605.1 - 43690 44647 43690 44647 1 43690, 44647, 0 BFLF2 cmpl cmpl 0, YP_401648.1 NC_007605.1 - 44659 46237 44659 46237 1 44659, 46237, 0 BFLF1 cmpl cmpl 0, BHRF1 NC_007605.1 + 42087 42663 42087 42663 1 42087, 42663, 0 BHRF1 cmpl cmpl 0, YP_401645.1 NC_007605.1 - 38286 40269 38286 40269 1 38286, 40269, 0 BHLF1 cmpl cmpl 0, YP_401643.1 NC_007605.1 + 34044 35196 34044 35196 1 34044, 35196, 0 BWRF1 cmpl cmpl 0, YP_401642.1 NC_007605.1 + 30972 32124 30972 32124 1 30972, 32124, 0 BWRF1 cmpl cmpl 0, YP_401641.1 NC_007605.1 + 27900 29052 27900 29052 1 27900, 29052, 0 BWRF1 cmpl cmpl 0, YP_401640.1 NC_007605.1 + 24828 25980 24828 25980 1 24828, 25980, 0 BWRF1 cmpl cmpl 0, YP_401639.1 NC_007605.1 + 21756 22908 21756 22908 1 21756, 22908, 0 BWRF1 cmpl cmpl 0, YP_401638.1 NC_007605.1 + 18684 19836 18684 19836 1 18684, 19836, 0 BWRF1 cmpl cmpl 0, YP_401637.1 NC_007605.1 + 15612 16764 15612 16764 1 15612, 16764, 0 BWRF1 cmpl cmpl 0, rna-HHV4_EBNA-LP NC_007605.1 + 14383 37744 14408 35694 19 14383,14558,14700,17625,17772,20697,20844,23769,23916,26841,26988,29913,30060,32985,33132,35472,35589,36097,37563, 14410,14619,14832,17691,17904,20763,20976,23835,24048,26907,27120,29979,30192,33051,33264,35505,35711,36156,37744, 0 EBNA-LP cmpl cmpl 0,2,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,-1,-1, YP_401635.1 NC_007605.1 + 12540 13692 12540 13692 1 12540, 13692, 0 BWRF1 cmpl cmpl 0, rna-HHV4_EBNA-2 NC_007605.1 + 11335 37744 36215 37679 19 11335,11625,14553,14700,17625,17772,20697,20844,23769,23916,26841,26988,29913,30060,32985,33132,35472,35589,36097, 11479,11657,14619,14832,17691,17904,20763,20976,23835,24048,26907,27120,29979,30192,33051,33264,35505,35711,37744, 0 EBNA-2 cmpl cmpl -1,-1,-1,-1,-1,-1,-1,-1,-1,-1,-1,-1,-1,-1,-1,-1,-1,-1,0, rna-HHV4_EBNA-3A NC_007605.1 + 11335 82962 79954 82877 21 11335,11625,14553,14700,17625,17772,20697,20844,23769,23916,26841,26988,29913,30060,32985,33132,35472,35589,55189,79949,80381, 11479,11657,14619,14832,17691,17904,20763,20976,23835,24048,26907,27120,29979,30192,33051,33264,35505,35711,55361,80293,82962, 0 EBNA-3A cmpl cmpl -1,-1,-1,-1,-1,-1,-1,-1,-1,-1,-1,-1,-1,-1,-1,-1,-1,-1,-1,0,0, rna-HHV4_EBNA-3B/EBNA-3C-2 NC_007605.1 + 11335 89482 86082 89135 21 11335,11625,14553,14700,17625,17772,20697,20844,23769,23916,26841,26988,29913,30060,32985,33132,35472,35589,55189,86075,86516, 11479,11657,14619,14832,17691,17904,20763,20976,23835,24048,26907,27120,29979,30192,33051,33264,35505,35711,55361,86442,89482, 0 EBNA-3B/EBNA-3C cmpl cmpl -1,-1,-1,-1,-1,-1,-1,-1,-1,-1,-1,-1,-1,-1,-1,-1,-1,-1,-1,0,0, rna-HHV4_EBNA-3B/EBNA-3C NC_007605.1 + 11335 89482 83064 85959 21 11335,11625,14553,14700,17625,17772,20697,20844,23769,23916,26841,26988,29913,30060,32985,33132,35472,35589,55189,83019,83499, 11479,11657,14619,14832,17691,17904,20763,20976,23835,24048,26907,27120,29979,30192,33051,33264,35505,35711,55361,83421,89482, 0 EBNA-3B/EBNA-3C cmpl cmpl -1,-1,-1,-1,-1,-1,-1,-1,-1,-1,-1,-1,-1,-1,-1,-1,-1,-1,-1,0,0, rna-HHV4_EBNA-1.1 NC_007605.1 + 11335 97654 97654 97654 21 11335,11625,14553,14700,17625,17772,20697,20844,23769,23916,26841,26988,29913,30060,32985,33132,35472,35589,55189,86075,95653, 11479,11657,14619,14832,17691,17904,20763,20976,23835,24048,26907,27120,29979,30192,33051,33264,35505,35711,55361,86442,97654, 0 EBNA-1 none none -1,-1,-1,-1,-1,-1,-1,-1,-1,-1,-1,-1,-1,-1,-1,-1,-1,-1,-1,-1,-1, YP_401634.1 NC_007605.1 + 9674 10187 9674 10187 1 9674, 10187, 0 BCRF1 cmpl cmpl 0, rna-NC_007605.1:6956..7128 NC_007605.1 + 6955 7128 7128 7128 1 6955, 7128, 0 rna-NC_007605.1:6956..7128 none none -1, rna-NC_007605.1:6629..6795 NC_007605.1 + 6628 6795 6795 6795 1 6628, 6795, 0 rna-NC_007605.1:6629..6795 none none -1, YP_401633.1 NC_007605.1 + 1735 5692 1735 5692 1 1735, 5692, 0 BNRF1 cmpl cmpl 0,